Guide to the Human Genome
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Name: LOC100131289 Sequence: fasta or formatted (84aa) NCBI GI: 169168972
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {84aa} PREDICTED: hypothetical protein
alt prot {84aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.4          2           1
 C cysteine            2.4          2           1
 D aspartate           7.1          6           2
 E glutamate           2.4          2           1
 F phenylalanine       1.2          1           1
 G glycine             9.5          8           1
 H histidine           1.2          1           1
 I isoleucine          0.0          0           0
 K lysine              4.8          4           1
 L leucine            11.9         10           1
 M methionine          2.4          2           1
 N asparagine          7.1          6           1
 P proline            11.9         10           1
 Q glutamine           4.8          4           1
 R arginine            4.8          4           2
 S serine             14.3         12           2
 T threonine           3.6          3           1
 V valine              3.6          3           1
 W tryptophan          4.8          4           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100131289          0.981   PREDICTED: hypothetical protein 
LOC100131289          0.981   PREDICTED: hypothetical protein 
GLIS2                 0.031   GLIS family zinc finger 2 
IRS2                  0.025   insulin receptor substrate 2 
PTCHD2                0.025   patched domain containing 2 
AIRE                  0.019   autoimmune regulator isoform 1 
AIRE                  0.019   autoimmune regulator isoform 2 
LOC100131172          0.019   PREDICTED: hypothetical protein 
LOC100131172          0.019   PREDICTED: hypothetical protein 
LOC100131172          0.019   PREDICTED: hypothetical protein 
SMAD1                 0.019   Sma- and Mad-related protein 1 
SMAD1                 0.019   Sma- and Mad-related protein 1 
ZNF789                0.019   zinc finger protein 789 isoform 1 
BIN2                  0.019   bridging integrator 2 
TNRC6B                0.013   trinucleotide repeat containing 6B isoform 1 
ZDHHC11B              0.013   PREDICTED: zinc finger, DHHC-type containing 11B [H...
LOC642441             0.013   PREDICTED: hypothetical protein 
COBL                  0.013   cordon-bleu homolog 
SMAD5                 0.013   SMAD, mothers against DPP homolog 5 
SMAD5                 0.013   SMAD, mothers against DPP homolog 5 
SMAD5                 0.013   SMAD, mothers against DPP homolog 5 
KIF26B                0.013   kinesin family member 26B 
LOC388199             0.013   hypothetical protein LOC388199 
LOC100133142          0.013   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100131109          0.013   PREDICTED: hypothetical protein 
LOC100293500          0.013   PREDICTED: hypothetical protein 
LOC100131109          0.013   PREDICTED: hypothetical protein 
LOC100133142          0.013   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100131109          0.013   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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