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Search of human proteins with 169167525
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169167525 PREDICTED: hypothetical protein [Homo sapiens]
(107 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169168278 PREDICTED: hypothetical protein [Homo sapiens] 222 6e-59
gi|169167525 PREDICTED: hypothetical protein [Homo sapiens] 222 6e-59
gi|167234405 hypothetical protein LOC284325 [Homo sapiens] 39 7e-04
gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens] 37 0.003
gi|27262645 ataxin 2 related protein isoform B [Homo sapiens] 37 0.003
gi|27262653 ataxin 2 related protein isoform E [Homo sapiens] 37 0.003
gi|27262649 ataxin 2 related protein isoform C [Homo sapiens] 37 0.003
gi|27262647 ataxin 2 related protein isoform A [Homo sapiens] 37 0.003
gi|27262651 ataxin 2 related protein isoform D [Homo sapiens] 37 0.003
gi|39812378 RAN binding protein 9 [Homo sapiens] 37 0.004
gi|239755587 PREDICTED: hypothetical protein [Homo sapiens] 37 0.004
gi|239744407 PREDICTED: hypothetical protein XP_002343137 [Homo ... 37 0.004
gi|188219577 ring finger protein 19B isoform a [Homo sapiens] 36 0.006
gi|45827755 transforming, acidic coiled-coil containing protein ... 36 0.006
gi|188219579 ring finger protein 19B isoform b [Homo sapiens] 36 0.006
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 36 0.008
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens] 35 0.010
gi|38176151 Lunapark [Homo sapiens] 35 0.013
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 35 0.013
gi|122937426 RGP1 retrograde golgi transport homolog [Homo sapiens] 35 0.013
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 35 0.017
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 35 0.017
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 34 0.022
gi|60460889 Myb protein P42POP [Homo sapiens] 34 0.029
gi|56118234 proline rich 6 [Homo sapiens] 34 0.029
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 34 0.029
gi|33286436 gametogenetin [Homo sapiens] 34 0.029
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 33 0.038
gi|45504380 jumonji domain containing 2B [Homo sapiens] 33 0.038
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 33 0.050
>gi|169168278 PREDICTED: hypothetical protein [Homo sapiens]
Length = 107
Score = 222 bits (565), Expect = 6e-59
Identities = 107/107 (100%), Positives = 107/107 (100%)
Query: 1 MDSVANHPGNPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQ 60
MDSVANHPGNPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQ
Sbjct: 1 MDSVANHPGNPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQ 60
Query: 61 RRSPARRALRPPPPFSSPNKHPSPEVTSLPSPPTPPSCSVSSALRSH 107
RRSPARRALRPPPPFSSPNKHPSPEVTSLPSPPTPPSCSVSSALRSH
Sbjct: 61 RRSPARRALRPPPPFSSPNKHPSPEVTSLPSPPTPPSCSVSSALRSH 107
>gi|169167525 PREDICTED: hypothetical protein [Homo sapiens]
Length = 107
Score = 222 bits (565), Expect = 6e-59
Identities = 107/107 (100%), Positives = 107/107 (100%)
Query: 1 MDSVANHPGNPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQ 60
MDSVANHPGNPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQ
Sbjct: 1 MDSVANHPGNPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQ 60
Query: 61 RRSPARRALRPPPPFSSPNKHPSPEVTSLPSPPTPPSCSVSSALRSH 107
RRSPARRALRPPPPFSSPNKHPSPEVTSLPSPPTPPSCSVSSALRSH
Sbjct: 61 RRSPARRALRPPPPFSSPNKHPSPEVTSLPSPPTPPSCSVSSALRSH 107
>gi|167234405 hypothetical protein LOC284325 [Homo sapiens]
Length = 351
Score = 39.3 bits (90), Expect = 7e-04
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 63 SPARRALRPPPPFSSPNKHPSPEVTSLPSPPTPPSCSVSSALRS 106
SP L+PP SP K P P+ +S+PSPP PPS SAL S
Sbjct: 3 SPCSPPLKPP---ISPPKTPVPQASSIPSPPLPPSPLDFSALPS 43
>gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens]
Length = 669
Score = 37.4 bits (85), Expect = 0.003
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 68 ALRPPPPFSS--PNKHPSPEVTSLPSPPTPP 96
+L+PPPP + P K P PEVT LP P PP
Sbjct: 68 SLKPPPPEVTDLPKKPPPPEVTDLPKKPPPP 98
Score = 35.4 bits (80), Expect = 0.010
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 70 RPPPPFSS--PNKHPSPEVTSLPSPPTPP 96
+PPPP + P K P PEVT LP P PP
Sbjct: 82 KPPPPEVTDLPKKPPPPEVTDLPKKPPPP 110
Score = 30.8 bits (68), Expect = 0.25
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 70 RPPPPFSS--PNKHPSPEVTSLPSPPT 94
+PPPP + P K P PEVT LP P+
Sbjct: 94 KPPPPEVTDLPKKPPPPEVTDLPKKPS 120
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Query: 65 ARRALRPPPPFSSPNKHPSPEVTSLPSPPTPP 96
AR LRP P P + P P +SL PP P
Sbjct: 429 ARPGLRPSHP---PRRRPLPPASSLGHPPAKP 457
Score = 25.8 bits (55), Expect = 7.9
Identities = 24/89 (26%), Positives = 30/89 (33%), Gaps = 7/89 (7%)
Query: 8 PGNPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPARR 67
PG P D LS R P P + G S +L + PA+
Sbjct: 160 PGAPARKPLQPDELSHPARPPSEPKSGAFPRKLWQPEAGEATPRSPQPELSTFPKKPAQ- 218
Query: 68 ALRPPPPFSS-PNKHPSPEVTSLPSPPTP 95
P F+ P K P P+V LP P
Sbjct: 219 -----PEFNVYPKKPPQPQVGGLPKKSVP 242
>gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]
Length = 1062
Score = 37.4 bits (85), Expect = 0.003
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 26 RTPVATLPERTPHPMHSS--GDGSQRILSASADLHRQRRSP-ARRALRPPPPFSSPNKHP 82
R +++LP R PH + +S G GS+ + + R SP A+R LR SSP+ P
Sbjct: 373 RPGLSSLPPRGPHHLDNSSPGPGSE---ARGINGGPSRMSPKAQRPLRGAKTLSSPSNRP 429
Query: 83 SPEVTSLPSPPT-----PPSCSVSSA 103
S E TS+P PP PP S+A
Sbjct: 430 SGE-TSVPPPPAVGRMYPPRSPKSAA 454
>gi|27262653 ataxin 2 related protein isoform E [Homo sapiens]
Length = 1044
Score = 37.4 bits (85), Expect = 0.003
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 26 RTPVATLPERTPHPMHSS--GDGSQRILSASADLHRQRRSP-ARRALRPPPPFSSPNKHP 82
R +++LP R PH + +S G GS+ + + R SP A+R LR SSP+ P
Sbjct: 373 RPGLSSLPPRGPHHLDNSSPGPGSE---ARGINGGPSRMSPKAQRPLRGAKTLSSPSNRP 429
Query: 83 SPEVTSLPSPPT-----PPSCSVSSA 103
S E TS+P PP PP S+A
Sbjct: 430 SGE-TSVPPPPAVGRMYPPRSPKSAA 454
>gi|27262649 ataxin 2 related protein isoform C [Homo sapiens]
Length = 1097
Score = 37.4 bits (85), Expect = 0.003
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 26 RTPVATLPERTPHPMHSS--GDGSQRILSASADLHRQRRSP-ARRALRPPPPFSSPNKHP 82
R +++LP R PH + +S G GS+ + + R SP A+R LR SSP+ P
Sbjct: 373 RPGLSSLPPRGPHHLDNSSPGPGSE---ARGINGGPSRMSPKAQRPLRGAKTLSSPSNRP 429
Query: 83 SPEVTSLPSPPT-----PPSCSVSSA 103
S E TS+P PP PP S+A
Sbjct: 430 SGE-TSVPPPPAVGRMYPPRSPKSAA 454
>gi|27262647 ataxin 2 related protein isoform A [Homo sapiens]
Length = 1075
Score = 37.4 bits (85), Expect = 0.003
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 26 RTPVATLPERTPHPMHSS--GDGSQRILSASADLHRQRRSP-ARRALRPPPPFSSPNKHP 82
R +++LP R PH + +S G GS+ + + R SP A+R LR SSP+ P
Sbjct: 373 RPGLSSLPPRGPHHLDNSSPGPGSE---ARGINGGPSRMSPKAQRPLRGAKTLSSPSNRP 429
Query: 83 SPEVTSLPSPPT-----PPSCSVSSA 103
S E TS+P PP PP S+A
Sbjct: 430 SGE-TSVPPPPAVGRMYPPRSPKSAA 454
>gi|27262651 ataxin 2 related protein isoform D [Homo sapiens]
Length = 1044
Score = 37.4 bits (85), Expect = 0.003
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 26 RTPVATLPERTPHPMHSS--GDGSQRILSASADLHRQRRSP-ARRALRPPPPFSSPNKHP 82
R +++LP R PH + +S G GS+ + + R SP A+R LR SSP+ P
Sbjct: 373 RPGLSSLPPRGPHHLDNSSPGPGSE---ARGINGGPSRMSPKAQRPLRGAKTLSSPSNRP 429
Query: 83 SPEVTSLPSPPT-----PPSCSVSSA 103
S E TS+P PP PP S+A
Sbjct: 430 SGE-TSVPPPPAVGRMYPPRSPKSAA 454
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 36.6 bits (83), Expect = 0.004
Identities = 24/87 (27%), Positives = 35/87 (40%)
Query: 10 NPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPARRAL 69
+P P+A+A + + L P A +P G G + + +A+A L P A
Sbjct: 20 SPPPPAALAPVSGVVLPAPPAVSAGSSPAGSPGGGAGGEGLGAAAAALLLHPPPPPPPAT 79
Query: 70 RPPPPFSSPNKHPSPEVTSLPSPPTPP 96
PPP P P+ PP PP
Sbjct: 80 AAPPPPPPPPPPPASAAAPASGPPAPP 106
>gi|239755587 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 36.6 bits (83), Expect = 0.004
Identities = 22/69 (31%), Positives = 30/69 (43%)
Query: 37 PHPMHSSGDGSQRILSASADLHRQRRSPARRALRPPPPFSSPNKHPSPEVTSLPSPPTPP 96
PHP+ + S+ A+ L RQ R+PAR P P S + P + P PP P
Sbjct: 36 PHPLSTLSLCSRSPAPAAPPLGRQSRNPARGLASPSTPSSLLSPSRIPRGQAAPPPPLPV 95
Query: 97 SCSVSSALR 105
+ LR
Sbjct: 96 DSGPETTLR 104
>gi|239744407 PREDICTED: hypothetical protein XP_002343137 [Homo
sapiens]
Length = 211
Score = 36.6 bits (83), Expect = 0.004
Identities = 22/69 (31%), Positives = 30/69 (43%)
Query: 37 PHPMHSSGDGSQRILSASADLHRQRRSPARRALRPPPPFSSPNKHPSPEVTSLPSPPTPP 96
PHP+ + S+ A+ L RQ R+PAR P P S + P + P PP P
Sbjct: 36 PHPLSTLSLCSRSPAPAAPPLGRQSRNPARGLASPSTPSSLLSPSRIPRGQAAPPPPLPV 95
Query: 97 SCSVSSALR 105
+ LR
Sbjct: 96 DSGPETTLR 104
>gi|188219577 ring finger protein 19B isoform a [Homo sapiens]
Length = 732
Score = 36.2 bits (82), Expect = 0.006
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 24 DLRTPVAT-LPERTPHPMHSSGDGSQR-----ILSASADLHRQRRSPARRALRPPPPFSS 77
D +P +T L P P SG +R + SASA R RR+ A+ PPPP +
Sbjct: 6 DSESPRSTSLHAAAPDPKCRSGGRRRRLTLHSVFSASA---RGRRARAKPQAEPPPPAAQ 62
Query: 78 PNKHPSPEVTSLPSPPTPPS 97
P P+P P P P+
Sbjct: 63 PPPAPAPAAAQGPPPEALPA 82
>gi|45827755 transforming, acidic coiled-coil containing protein 2
isoform b [Homo sapiens]
Length = 1094
Score = 36.2 bits (82), Expect = 0.006
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 13/102 (12%)
Query: 8 PGNPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPARR 67
PG+P A + ++ D+ P A +P SS G + S DL QR S +
Sbjct: 39 PGSPDHRDASSSPVADDIIQPAAPADLESPTLAASSYHGDV-VGQVSTDLIAQRSSDSEE 97
Query: 68 ALRPP-----------PPFSSPNKHPSPEVTSLPSPPTPPSC 98
A P PP P P PEV++ P PP P C
Sbjct: 98 AFETPESTTPVKAPPAPPPPPPEVIPEPEVSTQP-PPEEPGC 138
>gi|188219579 ring finger protein 19B isoform b [Homo sapiens]
Length = 587
Score = 36.2 bits (82), Expect = 0.006
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 24 DLRTPVAT-LPERTPHPMHSSGDGSQR-----ILSASADLHRQRRSPARRALRPPPPFSS 77
D +P +T L P P SG +R + SASA R RR+ A+ PPPP +
Sbjct: 6 DSESPRSTSLHAAAPDPKCRSGGRRRRLTLHSVFSASA---RGRRARAKPQAEPPPPAAQ 62
Query: 78 PNKHPSPEVTSLPSPPTPPS 97
P P+P P P P+
Sbjct: 63 PPPAPAPAAAQGPPPEALPA 82
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 35.8 bits (81), Expect = 0.008
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Query: 62 RSPARRALRPPPPFSSPNKHPSPEVTSLPSP------PTPPSCSVSSALR 105
+SP + P PP SP + SP S PSP P PPSC S R
Sbjct: 364 QSPVPQRRSPVPPCPSPQQRRSPASPSCPSPVPQRRSPVPPSCQSPSPQR 413
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 60 QRRSPARRALR-PPPPFSSPNKHPSPEVTSLPSPPTPP 96
QRRSP + + P P SP P P PP PP
Sbjct: 397 QRRSPVPPSCQSPSPQRRSPVPPSCPAPQPRPPPPPPP 434
>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
Length = 1352
Score = 35.4 bits (80), Expect = 0.010
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 14/91 (15%)
Query: 28 PVATLPERTPHPMHSSGDGSQRIL---SASADLHRQRRSPARRALR---PPPPFSSPNKH 81
P A +P S G R+L S + L + +P R LR PP P ++P
Sbjct: 46 PAAPSSPSSPSSARSVGSFMSRVLKTLSTLSHLSSEGAAPDRGGLRSCFPPGPAAAPTPP 105
Query: 82 PSPEVTSLPSPPTPPSCSVS-----SALRSH 107
P P P+ P PP+C+ + LR+H
Sbjct: 106 PCPPP---PASPAPPACAAEPVPGVAGLRNH 133
>gi|38176151 Lunapark [Homo sapiens]
Length = 428
Score = 35.0 bits (79), Expect = 0.013
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 9/55 (16%)
Query: 60 QRRSPARRALRPPPPFSSPNKHPSPEVTSLPSPPT-------PPSCSVSSALRSH 107
++R+ A+R L P P +SPN+ P P+V P PP PP +V+ AL S+
Sbjct: 167 RQRTAAQRNLSPTP--ASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSN 219
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 35.0 bits (79), Expect = 0.013
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 11 PLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPARRALR 70
PLGP +A +L L P P P ++ + + S +
Sbjct: 90 PLGPEHMAQASTLGLSPPSQAFPAHPEAPAAAARAAALVAHPGAGSYPCGGGSSGAQPSA 149
Query: 71 PPPPFSSPNKHPSPEVTSLPSPPTPPSCS 99
PPPP +P P+P P PP PP+ S
Sbjct: 150 PPPP--APPLPPTPSPPPPPPPPPPPALS 176
>gi|122937426 RGP1 retrograde golgi transport homolog [Homo sapiens]
Length = 431
Score = 35.0 bits (79), Expect = 0.013
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 37 PHPMHSSGDGSQRILSASADLHRQRRSPARRALRPPPPFSSPNKHPSPEVTSLPSPPTPP 96
P P ++ S+ + ASA +H Q + R PPP S P+ P + LP
Sbjct: 69 PLPPTATSASSEALAWASAQIHCQFHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERG 128
Query: 97 SCSVSS 102
C +S+
Sbjct: 129 QCILST 134
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 34.7 bits (78), Expect = 0.017
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 33 PERTPHPMHSSGDGSQRILSASADLHRQRRSPA-----RRALRPPPPFSSPNKHPSPEVT 87
P HP G Q + R+ +PA L P P + P+ P +
Sbjct: 254 PRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQ 313
Query: 88 SLPSPP-TPPSCSVSS 102
+LPSPP TPPS + +S
Sbjct: 314 TLPSPPATPPSQATTS 329
Score = 30.4 bits (67), Expect = 0.32
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 5 ANHPGN-PLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRS 63
A+ PG P PSA + +P+AT P + P + + AS L RR
Sbjct: 497 ASFPGQAPFSPSASLPM------SPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRP 550
Query: 64 PARRALRPPPPFSSPNKHPSPEVTSLPSPPTPPSCSVSSAL 104
P P P +S + P + P PP PPS S SS L
Sbjct: 551 PT------PGPDTSVSG-PRLTLALAPGPPPPPSRSPSSTL 584
Score = 29.3 bits (64), Expect = 0.71
Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 12/92 (13%)
Query: 8 PGNPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPARR 67
P P PSA L +L P TP ++ GS + + H SP
Sbjct: 300 PSAPPSPSAPPSLQTLPS-------PPATPPSQATTSLGSPTLQAT----HSFLPSPPLS 348
Query: 68 ALRPPPPFSSPNKHPSPEVTSLPSPPTPPSCS 99
L PPP +P P + + PSPP P S
Sbjct: 349 PLATPPP-QAPPALALPPLQAPPSPPASPPLS 379
Score = 27.3 bits (59), Expect = 2.7
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 27 TPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPARRALRPPPPFSSPNKHPSPEV 86
+P AT P + P P+ + ++ +P +AL P PP S P + P
Sbjct: 453 SPSATPPPQAPPPLAAP---PLQLAKPPPQAPPALATPPLQAL-PSPPASFPGQAPFSPS 508
Query: 87 TSLPSPP--TPP 96
SLP P TPP
Sbjct: 509 ASLPMSPLATPP 520
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 34.7 bits (78), Expect = 0.017
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 58 HRQ-RRSPARRALRPPPPFSSPNKHPSPEVTSLPSPPTPP 96
H+Q +++PA +PPPP P P P+ P PP PP
Sbjct: 743 HQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPP 782
Score = 28.9 bits (63), Expect = 0.93
Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 8 PGNPLGPSAVADLLSLDLRTPVATLPERTPHP---MHSSGDGSQRILSASADLHRQRRS- 63
P P P AV+ L+ +TP+ P P + + + S L+ Q+
Sbjct: 881 PPKPARPPAVSPALT---QTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQK 937
Query: 64 --------PARRALRPPPPFSSPNKHPSPEVTSLPSPPTPP 96
P+ + PPP P HPS + PP PP
Sbjct: 938 VQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPP 978
Score = 28.5 bits (62), Expect = 1.2
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 22 SLDLRTPVATLPERTPHPMHSSGDGS----QRILSASADLHRQRRSPARRALRPPPPFSS 77
S D T +A ++ HP Q++ A A + +Q P ++ PPPP
Sbjct: 714 SEDSETEMAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQ 773
Query: 78 PNKHPSPEVTSLPSPPTP 95
P P S+P P
Sbjct: 774 QQPPPPPPPPSMPQQAAP 791
Score = 26.2 bits (56), Expect = 6.1
Identities = 24/93 (25%), Positives = 32/93 (34%), Gaps = 10/93 (10%)
Query: 4 VANHPGNPLGPSAVADLLS-LDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRR 62
V + P PL P + L + P P+ P P Q+ +H Q
Sbjct: 950 VQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQ-------QQHQPPPRPVHLQPM 1002
Query: 63 SPARRALRPPPPFSSPNKHPSPEVTSLPSPPTP 95
+ +PPPP HP P P PP P
Sbjct: 1003 QFSTHIQQPPPPQGQQPPHPPP--GQQPPPPQP 1033
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 34.3 bits (77), Expect = 0.022
Identities = 33/95 (34%), Positives = 37/95 (38%), Gaps = 27/95 (28%)
Query: 8 PGNPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPARR 67
P P+ PS V LL L TP P HS DGS +L + A L
Sbjct: 404 PSQPILPS-VLSLLGLP-----------TPGPSHS--DGSFNLLGSDAHL---------- 439
Query: 68 ALRPPPPFSSPNKHPSPEVTSLPSPPTPPSCSVSS 102
PPPP S P P PS P S S+SS
Sbjct: 440 ---PPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSS 471
Score = 26.9 bits (58), Expect = 3.5
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 23/112 (20%)
Query: 8 PGNPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPA-R 66
PG P P + LLS A + P P S+ G + A + H P+ R
Sbjct: 313 PGAP--PFLASSLLS------AAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQR 364
Query: 67 RALRPPPPF--------SSPNKH------PSPEVTSLPSPPTPPSCSVSSAL 104
R RPP F +P + P P+ SLP P P SV S L
Sbjct: 365 RPRRPPTVFRLLEGRGPQTPRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLL 416
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 33.9 bits (76), Expect = 0.029
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 9/47 (19%)
Query: 59 RQRRSPARRALRP---------PPPFSSPNKHPSPEVTSLPSPPTPP 96
++R SP AL+P PPP + P P P PSPP+PP
Sbjct: 198 KERESPPPSALQPVQLPRLALSPPPPAPPLPPPPPLAQVAPSPPSPP 244
>gi|56118234 proline rich 6 [Homo sapiens]
Length = 272
Score = 33.9 bits (76), Expect = 0.029
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 13 GPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPARRALRPP 72
G SA + P AT RT +G SQ + ++ R RRS P
Sbjct: 19 GASAAPAASAAAALAPSAT---RTRRSASQAGSKSQAVEKPPSEKPRLRRSS------PR 69
Query: 73 PPFSSPNKHPSPEVTSLPSPPTPP 96
P + P PE+ LP PP PP
Sbjct: 70 AQEEGPGEPPPPELALLPPPPPPP 93
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 33.9 bits (76), Expect = 0.029
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 33 PERTPHP---MHSSGDGSQRILSASADLHRQRR-----SPARRALRPPPPFSSPNKHPSP 84
P R+P P + DG R + A+ R RR SP R+ R P F P + S
Sbjct: 520 PSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEPRRITSA 579
Query: 85 EVTSL----PSPPTPPSC-SVSSALRSH 107
+ PSP + SC S + RSH
Sbjct: 580 RKRPIPYYRPSPSSSSSCLSSDYSTRSH 607
Score = 25.8 bits (55), Expect = 7.9
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 14 PSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPARRALRPPP 73
PS+ + LS D T + R+P P HS G S R S + RSP+R P P
Sbjct: 591 PSSSSSCLSSDYSTRSHS---RSPSPGHSHGSYSSR----SHGTRSRTRSPSR---TPSP 640
Query: 74 PFSSPNKHPS 83
+ S + S
Sbjct: 641 SYHSRSSSES 650
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 33.9 bits (76), Expect = 0.029
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 17/102 (16%)
Query: 8 PGNPLGPSAVADLLSLDLRTPVATL---PERTPHPMHSSGDGSQRILSASADLHR-QRRS 63
P + P A +S P TL P + P + +R+L AS HR Q
Sbjct: 80 PSPVMPPPEEAAAVSAPPPAPAGTLLPGPSKWQKPAGTPVPRIRRLLEAS---HRGQGDP 136
Query: 64 PARRALRPPPP----------FSSPNKHPSPEVTSLPSPPTP 95
P+ R L+PPPP +P++ P P T P PP P
Sbjct: 137 PSLRPLKPPPPPRQLSVKDTVPRAPSQFPPPLETWKPPPPLP 178
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 33.5 bits (75), Expect = 0.038
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 22 SLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPARRALRPPPPFSSPNKH 81
SL P T P T P + + + +A +++ P AL PPPP + K
Sbjct: 731 SLQSPFPTDTAPTTTA-PAVAVTTTTTTTTTTTATQEEEKKPPP--ALPPPPPLA---KF 784
Query: 82 PSPEVTSLPSPPTPPSCSVSSALRS 106
P P S P PP PP S +S L+S
Sbjct: 785 PPP---SQPQPPPPPPPSPASLLKS 806
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 70 RPPPPFSSPNKHPSPEVTSLPSPPTPPS 97
RPP P +P P +T L PP PPS
Sbjct: 586 RPPSPAQNPQDPPLVPLT-LALPPAPPS 612
Score = 25.8 bits (55), Expect = 7.9
Identities = 23/69 (33%), Positives = 25/69 (36%), Gaps = 19/69 (27%)
Query: 6 NHPGNPLGPSAVADLLSLDLRTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPA 65
+H G LGPSA + R P P TPH G S P
Sbjct: 433 SHHGR-LGPSAHSS------RKPFLGAPAATPHLSLPPGPSSPP------------PPPC 473
Query: 66 RRALRPPPP 74
R LRPPPP
Sbjct: 474 PRLLRPPPP 482
Score = 25.8 bits (55), Expect = 7.9
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 52 SASADLHRQRRSPARRALRPPPPFSSPNKHPSPEVTS-LPSPPTPPSCSVSSAL 104
S++++ SPA PPPP+ + + P P S +P PP ++ AL
Sbjct: 553 SSNSNSGSHSSSPAGPVSFPPPPYLARSIDPLPRPPSPAQNPQDPPLVPLTLAL 606
>gi|45504380 jumonji domain containing 2B [Homo sapiens]
Length = 1096
Score = 33.5 bits (75), Expect = 0.038
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 33 PERTPHPMHSSG---DGSQRILSASADLHRQRRSPARRALRPPPPFSSPNKHPSPEVTSL 89
P+ PH + G DG ++ A R+++S + PPP P PS E L
Sbjct: 425 PQPLPHGREAEGAEEDGRGKLRPTKAKSERKKKSFGLLPPQLPPP---PAHFPSEEALWL 481
Query: 90 PSPPTPP 96
PSP PP
Sbjct: 482 PSPLEPP 488
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.1 bits (74), Expect = 0.050
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 14/74 (18%)
Query: 37 PHPMHSSGDGSQR---ILSASADLHRQRRSPARRALR---------PPPPFSSPNKHPS- 83
P PMH +GD I SA+ + + +SPA PPPP S S
Sbjct: 281 PPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALSTSSL 340
Query: 84 -PEVTSLPSPPTPP 96
+TS P PP PP
Sbjct: 341 RASMTSTPPPPVPP 354
Score = 28.9 bits (63), Expect = 0.93
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 15/71 (21%)
Query: 26 RTPVATLPERTPHPMHSSGDGSQRILSASADLHRQRRSPARRALRPPPPFSSPNKHPSPE 85
RTPV P P P S L AS PPPP P P P
Sbjct: 315 RTPVFVSPTPPPPPPPLPSALSTSSLRASM------------TSTPPPPVPPP---PPPP 359
Query: 86 VTSLPSPPTPP 96
T+L +P PP
Sbjct: 360 ATALQAPAVPP 370
Score = 26.2 bits (56), Expect = 6.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 64 PARRALRPPPPFSSPNKHPSP--EVTSLPSPPTPP 96
P+ R P + HP P EV LP PP PP
Sbjct: 396 PSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPP 430
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,496,358
Number of Sequences: 37866
Number of extensions: 414826
Number of successful extensions: 6135
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 473
Number of HSP's that attempted gapping in prelim test: 3550
Number of HSP's gapped (non-prelim): 2669
length of query: 107
length of database: 18,247,518
effective HSP length: 77
effective length of query: 30
effective length of database: 15,331,836
effective search space: 459955080
effective search space used: 459955080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.