Guide to the Human Genome
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Search of human proteins with 169167521

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169167521 PREDICTED: hypothetical protein [Homo sapiens]
         (290 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169167521 PREDICTED: hypothetical protein [Homo sapiens]           615   e-176
gi|169168282 PREDICTED: hypothetical protein [Homo sapiens]           555   e-158
gi|169168103 PREDICTED: hypothetical protein [Homo sapiens]           555   e-158
gi|58761506 sarcoma antigen NY-SAR-48 isoform b [Homo sapiens]         33   0.38 
gi|58761504 sarcoma antigen NY-SAR-48 isoform a [Homo sapiens]         33   0.38 
gi|68989256 ras inhibitor RIN1 [Homo sapiens]                          33   0.38 
gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein...    32   0.50 
gi|84626580 hypothetical protein LOC80178 [Homo sapiens]               32   0.85 
gi|167004110 methyltransferase-like protein 1 isoform c [Homo sa...    31   1.1  
gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens]         31   1.5  
gi|91822911 JAZF zinc finger 1 [Homo sapiens]                          30   1.9  
gi|89191830 hypothetical protein LOC388969 [Homo sapiens]              30   2.5  
gi|170932501 triggering receptor expressed on myeloid cells-like...    30   3.2  
gi|21265043 ADAM metallopeptidase with thrombospondin type 1 mot...    29   4.2  
gi|73695936 ADAM metallopeptidase with thrombospondin type 1 mot...    29   4.2  
gi|21265034 ADAM metallopeptidase with thrombospondin type 1 mot...    29   4.2  
gi|21361499 SUMO1/sentrin/SMT3 specific protease 3 [Homo sapiens]      29   5.5  
gi|161019170 mucin 5AC [Homo sapiens]                                  28   7.2  
gi|239752100 PREDICTED: hypothetical protein [Homo sapiens]            28   7.2  
gi|239746604 PREDICTED: similar to Keratin-associated protein 10...    28   7.2  
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]       28   7.2  
gi|156104874 envoplakin [Homo sapiens]                                 28   7.2  
gi|42733592 hypothetical protein LOC399693 [Homo sapiens]              28   7.2  
gi|7661960 Rough Deal homolog, centromere/kinetochore protein [H...    28   9.4  

>gi|169167521 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 290

 Score =  615 bits (1585), Expect = e-176
 Identities = 290/290 (100%), Positives = 290/290 (100%)

Query: 1   MIGCSLECVGELGTSCLEASCSYRGFSSDWRGATEERQLKASDKGRDWCLSPTLSGLRHP 60
           MIGCSLECVGELGTSCLEASCSYRGFSSDWRGATEERQLKASDKGRDWCLSPTLSGLRHP
Sbjct: 1   MIGCSLECVGELGTSCLEASCSYRGFSSDWRGATEERQLKASDKGRDWCLSPTLSGLRHP 60

Query: 61  REQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLGIQDAVTDGTSFFSQMCQNCD 120
           REQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLGIQDAVTDGTSFFSQMCQNCD
Sbjct: 61  REQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLGIQDAVTDGTSFFSQMCQNCD 120

Query: 121 AESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCL 180
           AESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCL
Sbjct: 121 AESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCL 180

Query: 181 LEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLALPGWSHRGSQDLPTEKEARAG 240
           LEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLALPGWSHRGSQDLPTEKEARAG
Sbjct: 181 LEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLALPGWSHRGSQDLPTEKEARAG 240

Query: 241 CFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDTAGRLSCSSPA 290
           CFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDTAGRLSCSSPA
Sbjct: 241 CFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDTAGRLSCSSPA 290


>gi|169168282 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 328

 Score =  555 bits (1431), Expect = e-158
 Identities = 262/263 (99%), Positives = 262/263 (99%)

Query: 28  SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY 87
           SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY
Sbjct: 66  SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY 125

Query: 88  WRQGLGTELVWLGIQDAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT 147
           WRQGLGTELVWLGIQ AVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT
Sbjct: 126 WRQGLGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT 185

Query: 148 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 207
           SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY
Sbjct: 186 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 245

Query: 208 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG 267
           YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG
Sbjct: 246 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG 305

Query: 268 PWSKVSLVGSTDTAGRLSCSSPA 290
           PWSKVSLVGSTDTAGRLSCSSPA
Sbjct: 306 PWSKVSLVGSTDTAGRLSCSSPA 328


>gi|169168103 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 370

 Score =  555 bits (1431), Expect = e-158
 Identities = 262/263 (99%), Positives = 262/263 (99%)

Query: 28  SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY 87
           SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY
Sbjct: 108 SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY 167

Query: 88  WRQGLGTELVWLGIQDAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT 147
           WRQGLGTELVWLGIQ AVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT
Sbjct: 168 WRQGLGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT 227

Query: 148 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 207
           SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY
Sbjct: 228 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 287

Query: 208 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG 267
           YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG
Sbjct: 288 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG 347

Query: 268 PWSKVSLVGSTDTAGRLSCSSPA 290
           PWSKVSLVGSTDTAGRLSCSSPA
Sbjct: 348 PWSKVSLVGSTDTAGRLSCSSPA 370


>gi|58761506 sarcoma antigen NY-SAR-48 isoform b [Homo sapiens]
          Length = 409

 Score = 32.7 bits (73), Expect = 0.38
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 92  LGTELVWLGIQDAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRD 151
           L  + VW   Q        +F+Q    C    GAP +  L E+D+PG  S+  QAT    
Sbjct: 327 LANQEVWEETQGMAPPSRWYFNQDSA-CRESGGAPKNTPLSEDDNPGASSAPAQATFISP 385

Query: 152 KKPLSS 157
            +  SS
Sbjct: 386 SEDFSS 391


>gi|58761504 sarcoma antigen NY-SAR-48 isoform a [Homo sapiens]
          Length = 410

 Score = 32.7 bits (73), Expect = 0.38
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 92  LGTELVWLGIQDAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRD 151
           L  + VW   Q        +F+Q    C    GAP +  L E+D+PG  S+  QAT    
Sbjct: 328 LANQEVWEETQGMAPPSRWYFNQDSA-CRESGGAPKNTPLSEDDNPGASSAPAQATFISP 386

Query: 152 KKPLSS 157
            +  SS
Sbjct: 387 SEDFSS 392


>gi|68989256 ras inhibitor RIN1 [Homo sapiens]
          Length = 783

 Score = 32.7 bits (73), Expect = 0.38
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 126 PTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEG 185
           P  PSL E D   P SS+++        P +S HL  R  +       FC+   LL  E 
Sbjct: 306 PPMPSLQEVDCGSPSSSEEEGVPGSRGSPATSPHLGRRRPLLRSMSAAFCS---LLAPER 362

Query: 186 LVLQPKTPLQEDSELLSG 203
            V +    L +D    +G
Sbjct: 363 QVGRAAAALMQDRHTAAG 380


>gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein)
           [Homo sapiens]
          Length = 480

 Score = 32.3 bits (72), Expect = 0.50
 Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 14/101 (13%)

Query: 108 GTSFFSQMCQNCDAESGAPTS-PSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQV 166
           G+ FFS  CQNC+A +G  +   SL+  D+  P   Q   +S R K  L+S    H  + 
Sbjct: 298 GSEFFS--CQNCEAVAGCSSGLDSLVPGDEDKPYKCQLCRSSFRYKGNLASHRTVHTGE- 354

Query: 167 ALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 207
                P+ C+  C     G        L+  S + SG  PY
Sbjct: 355 ----KPYHCSI-C-----GARFNRPANLKTHSRIHSGEKPY 385


>gi|84626580 hypothetical protein LOC80178 [Homo sapiens]
          Length = 433

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 106 TDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQ 165
           TD  +  +Q  QN    SG P          P   + + +A + R +K  S L L  R +
Sbjct: 234 TDAAAAKTQFLQNMQTASGGP---------QPRLSAVEVEAEAGRLRKACSLLRLRMREE 284

Query: 166 VALEYLPFFCTYGCLLEEEGL 186
           ++   + +   Y CLL  EGL
Sbjct: 285 LSAAPMDWMQEYRCLLTLEGL 305


>gi|167004110 methyltransferase-like protein 1 isoform c [Homo
           sapiens]
          Length = 155

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 139 PLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQED 197
           PL+  Q     +DKK         RAQ  +E+    C YG LL ++ ++  P+   Q D
Sbjct: 56  PLTQNQSHDDPKDKK-------EKRAQAQVEFADIGCGYGGLLADKDVLPLPRPTFQAD 107


>gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens]
          Length = 1066

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 120 DAESGAPT-SPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPF 173
           D E G PT SPSL E D   PL S+++  S   + P  S  L      +  + P+
Sbjct: 814 DPEVGTPTYSPSLKELDPNQPLESKERRASDGSRSPTPSQKLGSAYLPSYHHSPY 868


>gi|91822911 JAZF zinc finger 1 [Homo sapiens]
          Length = 243

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 10/96 (10%)

Query: 110 SFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALE 169
           SFFS  C+        PT   L+E  +   + +        D + L    L     VAL 
Sbjct: 8   SFFSNTCRFGGCGLHFPTLADLIEHIEDNHIDT--------DPRVLEKQELQQPTYVALS 59

Query: 170 YLPFFCTYGCLLEEEGL--VLQPKTPLQEDSELLSG 203
           Y+  F T     E+E L   +QPK  L   S +  G
Sbjct: 60  YINRFMTDAARREQESLKKKIQPKLSLTLSSSVSRG 95


>gi|89191830 hypothetical protein LOC388969 [Homo sapiens]
          Length = 166

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 116 CQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVA 167
           C   +A+SG  TS  + + DDPG +S +  A +  D     +L L  + ++A
Sbjct: 109 CLEYEADSGEVTSVIVYQGDDPGKVSEKVSAHTPLDPPMREALKLRIQEEIA 160


>gi|170932501 triggering receptor expressed on myeloid cells-like 2
           [Homo sapiens]
          Length = 321

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 39  LKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGN 77
           LK  D GR WC+  T SG+ +P     + ++P P T  N
Sbjct: 95  LKLQDSGRYWCMRNT-SGILYPLMGFQLDVSPAPQTERN 132


>gi|21265043 ADAM metallopeptidase with thrombospondin type 1 motif,
           13 isoform 3 preproprotein [Homo sapiens]
          Length = 1340

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 15/40 (37%), Positives = 16/40 (40%)

Query: 43  DKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 82
           D G +  L     GL  P  Q    L P P  W   SLGP
Sbjct: 953 DDGEEILLDTQCQGLPRPEPQEACSLEPCPPRWKVMSLGP 992


>gi|73695936 ADAM metallopeptidase with thrombospondin type 1 motif,
            13 isoform 2 preproprotein [Homo sapiens]
          Length = 1371

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 15/40 (37%), Positives = 16/40 (40%)

Query: 43   DKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 82
            D G +  L     GL  P  Q    L P P  W   SLGP
Sbjct: 984  DDGEEILLDTQCQGLPRPEPQEACSLEPCPPRWKVMSLGP 1023


>gi|21265034 ADAM metallopeptidase with thrombospondin type 1 motif,
            13 isoform 1 preproprotein [Homo sapiens]
          Length = 1427

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 15/40 (37%), Positives = 16/40 (40%)

Query: 43   DKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 82
            D G +  L     GL  P  Q    L P P  W   SLGP
Sbjct: 984  DDGEEILLDTQCQGLPRPEPQEACSLEPCPPRWKVMSLGP 1023


>gi|21361499 SUMO1/sentrin/SMT3 specific protease 3 [Homo sapiens]
          Length = 574

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 181 LEEEGLVLQPKTPLQEDSELLSGFFP 206
           +EE+GL   PK+PL  DS LLS   P
Sbjct: 221 MEEDGLRWTPKSPLDPDSGLLSCTLP 246


>gi|161019170 mucin 5AC [Homo sapiens]
          Length = 6207

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 5/32 (15%)

Query: 8    CVGELGTSC--LEAS---CSYRGFSSDWRGAT 34
            C G L   C  LEA    C  RG  SDWRGAT
Sbjct: 5657 CRGRLEVPCQSLEAYAELCRARGVCSDWRGAT 5688


>gi|239752100 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 312

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 120 DAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGC 179
           D ES   T         P P SSQ  +  SRDK+P S+       Q+      F+C Y  
Sbjct: 37  DTESWLQTERMARSTCSPAPQSSQGDS-ESRDKRPGSAAKPLPPLQIQKRSTSFYCPYNS 95

Query: 180 LL 181
            L
Sbjct: 96  RL 97


>gi|239746604 PREDICTED: similar to Keratin-associated protein 10-8
           [Homo sapiens]
          Length = 312

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 120 DAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGC 179
           D ES   T         P P SSQ  +  SRDK+P S+       Q+      F+C Y  
Sbjct: 37  DTESWLQTERMARSTCSPAPQSSQGDS-ESRDKRPGSAAKPLPPLQIQKRSTSFYCPYNS 95

Query: 180 LL 181
            L
Sbjct: 96  RL 97


>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
          Length = 5765

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 5/32 (15%)

Query: 8    CVGELGTSC--LEAS---CSYRGFSSDWRGAT 34
            C G L   C  LEA    C  RG  SDWRGAT
Sbjct: 5323 CRGRLEVPCQSLEAYAELCRARGVCSDWRGAT 5354


>gi|156104874 envoplakin [Homo sapiens]
          Length = 2033

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 12/107 (11%)

Query: 99  LGIQDAVTDGTSFFSQMCQNC--DAESGAPTSPSLLEEDDPGP------LSSQQQATS-- 148
           L +++ V    +   Q  +NC  +  S     P        GP      L +Q++ T   
Sbjct: 738 LDLREKVVQDAALTYQQFKNCKDNLSSWLEHLPRSQVRPSDGPSQIAYKLQAQKRLTQEI 797

Query: 149 -SRDKKPLSSLHLSHRAQVAL-EYLPFFCTYGCLLEEEGLVLQPKTP 193
            SR++   ++ HLS   Q AL +Y     TY C LE    V  PK P
Sbjct: 798 QSRERDRATASHLSQALQAALQDYELQADTYRCSLEPTLAVSAPKRP 844


>gi|42733592 hypothetical protein LOC399693 [Homo sapiens]
          Length = 953

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 243 CRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTD 279
           C     D+ + L   W GPSQ    PW+   +VGS D
Sbjct: 50  CAPAAEDDVAALR--WPGPSQQPDPPWAAPHVVGSDD 84


>gi|7661960 Rough Deal homolog, centromere/kinetochore protein [Homo
            sapiens]
          Length = 2209

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 176  TYGCLLEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLALP 221
            +Y     E+G+VL+ +  L    EL+S   P   S+   L S +LP
Sbjct: 1192 SYSDFFSEDGIVLESQMVLPVIYELISSLVPLAESKRYPLESTSLP 1237


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,712,476
Number of Sequences: 37866
Number of extensions: 698445
Number of successful extensions: 2023
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2003
Number of HSP's gapped (non-prelim): 32
length of query: 290
length of database: 18,247,518
effective HSP length: 101
effective length of query: 189
effective length of database: 14,423,052
effective search space: 2725956828
effective search space used: 2725956828
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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