BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169167521 PREDICTED: hypothetical protein [Homo sapiens] (290 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169167521 PREDICTED: hypothetical protein [Homo sapiens] 615 e-176 gi|169168282 PREDICTED: hypothetical protein [Homo sapiens] 555 e-158 gi|169168103 PREDICTED: hypothetical protein [Homo sapiens] 555 e-158 gi|58761506 sarcoma antigen NY-SAR-48 isoform b [Homo sapiens] 33 0.38 gi|58761504 sarcoma antigen NY-SAR-48 isoform a [Homo sapiens] 33 0.38 gi|68989256 ras inhibitor RIN1 [Homo sapiens] 33 0.38 gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein... 32 0.50 gi|84626580 hypothetical protein LOC80178 [Homo sapiens] 32 0.85 gi|167004110 methyltransferase-like protein 1 isoform c [Homo sa... 31 1.1 gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens] 31 1.5 gi|91822911 JAZF zinc finger 1 [Homo sapiens] 30 1.9 gi|89191830 hypothetical protein LOC388969 [Homo sapiens] 30 2.5 gi|170932501 triggering receptor expressed on myeloid cells-like... 30 3.2 gi|21265043 ADAM metallopeptidase with thrombospondin type 1 mot... 29 4.2 gi|73695936 ADAM metallopeptidase with thrombospondin type 1 mot... 29 4.2 gi|21265034 ADAM metallopeptidase with thrombospondin type 1 mot... 29 4.2 gi|21361499 SUMO1/sentrin/SMT3 specific protease 3 [Homo sapiens] 29 5.5 gi|161019170 mucin 5AC [Homo sapiens] 28 7.2 gi|239752100 PREDICTED: hypothetical protein [Homo sapiens] 28 7.2 gi|239746604 PREDICTED: similar to Keratin-associated protein 10... 28 7.2 gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 28 7.2 gi|156104874 envoplakin [Homo sapiens] 28 7.2 gi|42733592 hypothetical protein LOC399693 [Homo sapiens] 28 7.2 gi|7661960 Rough Deal homolog, centromere/kinetochore protein [H... 28 9.4 >gi|169167521 PREDICTED: hypothetical protein [Homo sapiens] Length = 290 Score = 615 bits (1585), Expect = e-176 Identities = 290/290 (100%), Positives = 290/290 (100%) Query: 1 MIGCSLECVGELGTSCLEASCSYRGFSSDWRGATEERQLKASDKGRDWCLSPTLSGLRHP 60 MIGCSLECVGELGTSCLEASCSYRGFSSDWRGATEERQLKASDKGRDWCLSPTLSGLRHP Sbjct: 1 MIGCSLECVGELGTSCLEASCSYRGFSSDWRGATEERQLKASDKGRDWCLSPTLSGLRHP 60 Query: 61 REQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLGIQDAVTDGTSFFSQMCQNCD 120 REQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLGIQDAVTDGTSFFSQMCQNCD Sbjct: 61 REQRPMQLTPVPWTWGNRSLGPFLTIYWRQGLGTELVWLGIQDAVTDGTSFFSQMCQNCD 120 Query: 121 AESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCL 180 AESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCL Sbjct: 121 AESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCL 180 Query: 181 LEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLALPGWSHRGSQDLPTEKEARAG 240 LEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLALPGWSHRGSQDLPTEKEARAG Sbjct: 181 LEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLALPGWSHRGSQDLPTEKEARAG 240 Query: 241 CFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDTAGRLSCSSPA 290 CFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDTAGRLSCSSPA Sbjct: 241 CFCRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTDTAGRLSCSSPA 290 >gi|169168282 PREDICTED: hypothetical protein [Homo sapiens] Length = 328 Score = 555 bits (1431), Expect = e-158 Identities = 262/263 (99%), Positives = 262/263 (99%) Query: 28 SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY 87 SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY Sbjct: 66 SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY 125 Query: 88 WRQGLGTELVWLGIQDAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT 147 WRQGLGTELVWLGIQ AVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT Sbjct: 126 WRQGLGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT 185 Query: 148 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 207 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY Sbjct: 186 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 245 Query: 208 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG 267 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG Sbjct: 246 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG 305 Query: 268 PWSKVSLVGSTDTAGRLSCSSPA 290 PWSKVSLVGSTDTAGRLSCSSPA Sbjct: 306 PWSKVSLVGSTDTAGRLSCSSPA 328 >gi|169168103 PREDICTED: hypothetical protein [Homo sapiens] Length = 370 Score = 555 bits (1431), Expect = e-158 Identities = 262/263 (99%), Positives = 262/263 (99%) Query: 28 SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY 87 SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY Sbjct: 108 SDWRGATEERQLKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGPFLTIY 167 Query: 88 WRQGLGTELVWLGIQDAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT 147 WRQGLGTELVWLGIQ AVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT Sbjct: 168 WRQGLGTELVWLGIQGAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQAT 227 Query: 148 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 207 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY Sbjct: 228 SSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 287 Query: 208 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG 267 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG Sbjct: 288 YRSEEESLPSLALPGWSHRGSQDLPTEKEARAGCFCRTTVRDECSTLTGPWTGPSQGCCG 347 Query: 268 PWSKVSLVGSTDTAGRLSCSSPA 290 PWSKVSLVGSTDTAGRLSCSSPA Sbjct: 348 PWSKVSLVGSTDTAGRLSCSSPA 370 >gi|58761506 sarcoma antigen NY-SAR-48 isoform b [Homo sapiens] Length = 409 Score = 32.7 bits (73), Expect = 0.38 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 92 LGTELVWLGIQDAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRD 151 L + VW Q +F+Q C GAP + L E+D+PG S+ QAT Sbjct: 327 LANQEVWEETQGMAPPSRWYFNQDSA-CRESGGAPKNTPLSEDDNPGASSAPAQATFISP 385 Query: 152 KKPLSS 157 + SS Sbjct: 386 SEDFSS 391 >gi|58761504 sarcoma antigen NY-SAR-48 isoform a [Homo sapiens] Length = 410 Score = 32.7 bits (73), Expect = 0.38 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 92 LGTELVWLGIQDAVTDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRD 151 L + VW Q +F+Q C GAP + L E+D+PG S+ QAT Sbjct: 328 LANQEVWEETQGMAPPSRWYFNQDSA-CRESGGAPKNTPLSEDDNPGASSAPAQATFISP 386 Query: 152 KKPLSS 157 + SS Sbjct: 387 SEDFSS 392 >gi|68989256 ras inhibitor RIN1 [Homo sapiens] Length = 783 Score = 32.7 bits (73), Expect = 0.38 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 126 PTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEG 185 P PSL E D P SS+++ P +S HL R + FC+ LL E Sbjct: 306 PPMPSLQEVDCGSPSSSEEEGVPGSRGSPATSPHLGRRRPLLRSMSAAFCS---LLAPER 362 Query: 186 LVLQPKTPLQEDSELLSG 203 V + L +D +G Sbjct: 363 QVGRAAAALMQDRHTAAG 380 >gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein) [Homo sapiens] Length = 480 Score = 32.3 bits (72), Expect = 0.50 Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 14/101 (13%) Query: 108 GTSFFSQMCQNCDAESGAPTS-PSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQV 166 G+ FFS CQNC+A +G + SL+ D+ P Q +S R K L+S H + Sbjct: 298 GSEFFS--CQNCEAVAGCSSGLDSLVPGDEDKPYKCQLCRSSFRYKGNLASHRTVHTGE- 354 Query: 167 ALEYLPFFCTYGCLLEEEGLVLQPKTPLQEDSELLSGFFPY 207 P+ C+ C G L+ S + SG PY Sbjct: 355 ----KPYHCSI-C-----GARFNRPANLKTHSRIHSGEKPY 385 >gi|84626580 hypothetical protein LOC80178 [Homo sapiens] Length = 433 Score = 31.6 bits (70), Expect = 0.85 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 9/81 (11%) Query: 106 TDGTSFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQ 165 TD + +Q QN SG P P + + +A + R +K S L L R + Sbjct: 234 TDAAAAKTQFLQNMQTASGGP---------QPRLSAVEVEAEAGRLRKACSLLRLRMREE 284 Query: 166 VALEYLPFFCTYGCLLEEEGL 186 ++ + + Y CLL EGL Sbjct: 285 LSAAPMDWMQEYRCLLTLEGL 305 >gi|167004110 methyltransferase-like protein 1 isoform c [Homo sapiens] Length = 155 Score = 31.2 bits (69), Expect = 1.1 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 7/59 (11%) Query: 139 PLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGCLLEEEGLVLQPKTPLQED 197 PL+ Q +DKK RAQ +E+ C YG LL ++ ++ P+ Q D Sbjct: 56 PLTQNQSHDDPKDKK-------EKRAQAQVEFADIGCGYGGLLADKDVLPLPRPTFQAD 107 >gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens] Length = 1066 Score = 30.8 bits (68), Expect = 1.5 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 120 DAESGAPT-SPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPF 173 D E G PT SPSL E D PL S+++ S + P S L + + P+ Sbjct: 814 DPEVGTPTYSPSLKELDPNQPLESKERRASDGSRSPTPSQKLGSAYLPSYHHSPY 868 >gi|91822911 JAZF zinc finger 1 [Homo sapiens] Length = 243 Score = 30.4 bits (67), Expect = 1.9 Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 10/96 (10%) Query: 110 SFFSQMCQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALE 169 SFFS C+ PT L+E + + + D + L L VAL Sbjct: 8 SFFSNTCRFGGCGLHFPTLADLIEHIEDNHIDT--------DPRVLEKQELQQPTYVALS 59 Query: 170 YLPFFCTYGCLLEEEGL--VLQPKTPLQEDSELLSG 203 Y+ F T E+E L +QPK L S + G Sbjct: 60 YINRFMTDAARREQESLKKKIQPKLSLTLSSSVSRG 95 >gi|89191830 hypothetical protein LOC388969 [Homo sapiens] Length = 166 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/52 (30%), Positives = 27/52 (51%) Query: 116 CQNCDAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVA 167 C +A+SG TS + + DDPG +S + A + D +L L + ++A Sbjct: 109 CLEYEADSGEVTSVIVYQGDDPGKVSEKVSAHTPLDPPMREALKLRIQEEIA 160 >gi|170932501 triggering receptor expressed on myeloid cells-like 2 [Homo sapiens] Length = 321 Score = 29.6 bits (65), Expect = 3.2 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Query: 39 LKASDKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGN 77 LK D GR WC+ T SG+ +P + ++P P T N Sbjct: 95 LKLQDSGRYWCMRNT-SGILYPLMGFQLDVSPAPQTERN 132 >gi|21265043 ADAM metallopeptidase with thrombospondin type 1 motif, 13 isoform 3 preproprotein [Homo sapiens] Length = 1340 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/40 (37%), Positives = 16/40 (40%) Query: 43 DKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 82 D G + L GL P Q L P P W SLGP Sbjct: 953 DDGEEILLDTQCQGLPRPEPQEACSLEPCPPRWKVMSLGP 992 >gi|73695936 ADAM metallopeptidase with thrombospondin type 1 motif, 13 isoform 2 preproprotein [Homo sapiens] Length = 1371 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/40 (37%), Positives = 16/40 (40%) Query: 43 DKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 82 D G + L GL P Q L P P W SLGP Sbjct: 984 DDGEEILLDTQCQGLPRPEPQEACSLEPCPPRWKVMSLGP 1023 >gi|21265034 ADAM metallopeptidase with thrombospondin type 1 motif, 13 isoform 1 preproprotein [Homo sapiens] Length = 1427 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/40 (37%), Positives = 16/40 (40%) Query: 43 DKGRDWCLSPTLSGLRHPREQRPMQLTPVPWTWGNRSLGP 82 D G + L GL P Q L P P W SLGP Sbjct: 984 DDGEEILLDTQCQGLPRPEPQEACSLEPCPPRWKVMSLGP 1023 >gi|21361499 SUMO1/sentrin/SMT3 specific protease 3 [Homo sapiens] Length = 574 Score = 28.9 bits (63), Expect = 5.5 Identities = 14/26 (53%), Positives = 17/26 (65%) Query: 181 LEEEGLVLQPKTPLQEDSELLSGFFP 206 +EE+GL PK+PL DS LLS P Sbjct: 221 MEEDGLRWTPKSPLDPDSGLLSCTLP 246 >gi|161019170 mucin 5AC [Homo sapiens] Length = 6207 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 5/32 (15%) Query: 8 CVGELGTSC--LEAS---CSYRGFSSDWRGAT 34 C G L C LEA C RG SDWRGAT Sbjct: 5657 CRGRLEVPCQSLEAYAELCRARGVCSDWRGAT 5688 >gi|239752100 PREDICTED: hypothetical protein [Homo sapiens] Length = 312 Score = 28.5 bits (62), Expect = 7.2 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 120 DAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGC 179 D ES T P P SSQ + SRDK+P S+ Q+ F+C Y Sbjct: 37 DTESWLQTERMARSTCSPAPQSSQGDS-ESRDKRPGSAAKPLPPLQIQKRSTSFYCPYNS 95 Query: 180 LL 181 L Sbjct: 96 RL 97 >gi|239746604 PREDICTED: similar to Keratin-associated protein 10-8 [Homo sapiens] Length = 312 Score = 28.5 bits (62), Expect = 7.2 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Query: 120 DAESGAPTSPSLLEEDDPGPLSSQQQATSSRDKKPLSSLHLSHRAQVALEYLPFFCTYGC 179 D ES T P P SSQ + SRDK+P S+ Q+ F+C Y Sbjct: 37 DTESWLQTERMARSTCSPAPQSSQGDS-ESRDKRPGSAAKPLPPLQIQKRSTSFYCPYNS 95 Query: 180 LL 181 L Sbjct: 96 RL 97 >gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] Length = 5765 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 5/32 (15%) Query: 8 CVGELGTSC--LEAS---CSYRGFSSDWRGAT 34 C G L C LEA C RG SDWRGAT Sbjct: 5323 CRGRLEVPCQSLEAYAELCRARGVCSDWRGAT 5354 >gi|156104874 envoplakin [Homo sapiens] Length = 2033 Score = 28.5 bits (62), Expect = 7.2 Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 12/107 (11%) Query: 99 LGIQDAVTDGTSFFSQMCQNC--DAESGAPTSPSLLEEDDPGP------LSSQQQATS-- 148 L +++ V + Q +NC + S P GP L +Q++ T Sbjct: 738 LDLREKVVQDAALTYQQFKNCKDNLSSWLEHLPRSQVRPSDGPSQIAYKLQAQKRLTQEI 797 Query: 149 -SRDKKPLSSLHLSHRAQVAL-EYLPFFCTYGCLLEEEGLVLQPKTP 193 SR++ ++ HLS Q AL +Y TY C LE V PK P Sbjct: 798 QSRERDRATASHLSQALQAALQDYELQADTYRCSLEPTLAVSAPKRP 844 >gi|42733592 hypothetical protein LOC399693 [Homo sapiens] Length = 953 Score = 28.5 bits (62), Expect = 7.2 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Query: 243 CRTTVRDECSTLTGPWTGPSQGCCGPWSKVSLVGSTD 279 C D+ + L W GPSQ PW+ +VGS D Sbjct: 50 CAPAAEDDVAALR--WPGPSQQPDPPWAAPHVVGSDD 84 >gi|7661960 Rough Deal homolog, centromere/kinetochore protein [Homo sapiens] Length = 2209 Score = 28.1 bits (61), Expect = 9.4 Identities = 15/46 (32%), Positives = 23/46 (50%) Query: 176 TYGCLLEEEGLVLQPKTPLQEDSELLSGFFPYYRSEEESLPSLALP 221 +Y E+G+VL+ + L EL+S P S+ L S +LP Sbjct: 1192 SYSDFFSEDGIVLESQMVLPVIYELISSLVPLAESKRYPLESTSLP 1237 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.133 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,712,476 Number of Sequences: 37866 Number of extensions: 698445 Number of successful extensions: 2023 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 2003 Number of HSP's gapped (non-prelim): 32 length of query: 290 length of database: 18,247,518 effective HSP length: 101 effective length of query: 189 effective length of database: 14,423,052 effective search space: 2725956828 effective search space used: 2725956828 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.