Guide to the Human Genome
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Name: LOC100132330 Sequence: fasta or formatted (130aa) NCBI GI: 169164253
Description:

PREDICTED: similar to mal, T-cell differentiation protein-like

Not currently referenced in the text

Other entries for this name:
alt mRNA {130aa} PREDICTED: similar to mal, T-cell differentiation protein-like
alt mRNA {130aa} PREDICTED: similar to mal, T-cell differentiation protein-like
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9          9           2
 C cysteine            0.8          1           1
 D aspartate           3.1          4           1
 E glutamate           3.1          4           1
 F phenylalanine       7.7         10           2
 G glycine             4.6          6           1
 H histidine           3.1          4           1
 I isoleucine          6.2          8           1
 K lysine              0.0          0           0
 L leucine            14.6         19           2
 M methionine          4.6          6           1
 N asparagine          2.3          3           1
 P proline             2.3          3           1
 Q glutamine           3.1          4           1
 R arginine            2.3          3           1
 S serine             10.8         14           3
 T threonine           6.9          9           2
 V valine              9.2         12           1
 W tryptophan          3.1          4           1
 Y tyrosine            5.4          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to mal, T-cell differentiation p... 
LOC100132330          1.000   PREDICTED: similar to mal, T-cell differentiation p...
LOC100132330          1.000   PREDICTED: similar to mal, T-cell differentiation p...
LOC100287119          0.609   PREDICTED: hypothetical protein XP_002342305 
MALL                  0.605   mal, T-cell differentiation protein-like 
MAL                   0.261   T-lymphocyte maturation-associated protein isoform a ...
MAL2                  0.214   MAL2 proteolipid protein 
CMTM8                 0.113   CKLF-like MARVEL transmembrane domain containing 8 [...
PLLP                  0.113   plasmolipin 
MAL                   0.101   T-lymphocyte maturation-associated protein isoform b...
MAL                   0.088   T-lymphocyte maturation-associated protein isoform c...
STT3A                 0.034   integral membrane protein 1 
MYADM                 0.021   myeloid-associated differentiation marker 
MYADM                 0.021   myeloid-associated differentiation marker 
MYADM                 0.021   myeloid-associated differentiation marker 
MYADM                 0.021   myeloid-associated differentiation marker 
MYADM                 0.021   myeloid-associated differentiation marker 
GPR63                 0.017   G protein-coupled receptor 63 
GPR63                 0.017   G protein-coupled receptor 63 
CNOT1                 0.013   CCR4-NOT transcription complex, subunit 1 isoform a ...
TAP1                  0.013   transporter 1, ATP-binding cassette, sub-family B [Ho...
SMCR8                 0.008   Smith-Magenis syndrome chromosome region, candidate...
SLC12A7               0.008   solute carrier family 12 (potassium/chloride transp...
SLC38A5               0.008   solute carrier family 38, member 5 
SLC39A12              0.008   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.008   solute carrier family 39 (zinc transporter), member...
SLC12A5               0.008   solute carrier family 12 (potassium-chloride transp...
SLC12A5               0.008   solute carrier family 12 (potassium-chloride transpo...
LGALS3BP              0.008   galectin 3 binding protein 
SLC12A4               0.004   solute carrier family 12, member 4 isoform e 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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