Guide to the Human Genome
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Name: MALL Sequence: fasta or formatted (153aa) NCBI GI: 13162283
Description:

mal, T-cell differentiation protein-like

Referenced in:

Additional Membrane Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         15           2
 C cysteine            0.0          0           0
 D aspartate           2.6          4           1
 E glutamate           2.0          3           1
 F phenylalanine       9.8         15           2
 G glycine             3.9          6           1
 H histidine           3.3          5           1
 I isoleucine          7.2         11           1
 K lysine              1.3          2           1
 L leucine            14.4         22           2
 M methionine          3.3          5           1
 N asparagine          0.7          1           1
 P proline             5.9          9           2
 Q glutamine           1.3          2           1
 R arginine            2.0          3           1
 S serine              9.8         15           1
 T threonine           5.9          9           2
 V valine              7.2         11           1
 W tryptophan          2.0          3           1
 Y tyrosine            7.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mal, T-cell differentiation protein-like 
LOC100287119          0.754   PREDICTED: hypothetical protein XP_002342305 
LOC100132330          0.507   PREDICTED: similar to mal, T-cell differentiation p...
LOC100132330          0.507   PREDICTED: similar to mal, T-cell differentiation p...
LOC100132330          0.507   PREDICTED: similar to mal, T-cell differentiation p...
MAL                   0.342   T-lymphocyte maturation-associated protein isoform a ...
MAL2                  0.282   MAL2 proteolipid protein 
MAL                   0.183   T-lymphocyte maturation-associated protein isoform b...
CMTM8                 0.165   CKLF-like MARVEL transmembrane domain containing 8 [...
PLLP                  0.120   plasmolipin 
MAL                   0.099   T-lymphocyte maturation-associated protein isoform c...
CMTM6                 0.056   CKLF-like MARVEL transmembrane domain containing 6 [H...
MAL                   0.039   T-lymphocyte maturation-associated protein isoform d...
CMTM5                 0.028   chemokine-like factor superfamily 5 isoform a 
SLC48A1               0.021   heme-responsive gene 1 
OR6N1                 0.021   olfactory receptor, family 6, subfamily N, member 1 ...
GPR157                0.018   G protein-coupled receptor 157 
SLC6A9                0.014   solute carrier family 6 member 9 isoform 3 
SLC6A9                0.014   solute carrier family 6 member 9 isoform 2 
SLC6A9                0.014   solute carrier family 6 member 9 isoform 1 
ALG10                 0.014   asparagine-linked glycosylation 10 homolog (yeast, ...
SLC9A3                0.014   solute carrier family 9 (sodium/hydrogen exchanger)...
CMTM5                 0.014   chemokine-like factor superfamily 5 isoform c 
CNOT1                 0.014   CCR4-NOT transcription complex, subunit 1 isoform a ...
WFS1                  0.011   wolframin 
WFS1                  0.011   wolframin 
PCDHGC3               0.011   protocadherin gamma subfamily C, 3 isoform 2 precurs...
PCDHGC3               0.011   protocadherin gamma subfamily C, 3 isoform 1 precurs...
CD37                  0.007   CD37 antigen isoform A 
CMTM4                 0.007   chemokine-like factor superfamily 4 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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