Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169164134
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169164134 PREDICTED: hypothetical protein [Homo sapiens]
(173 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169164134 PREDICTED: hypothetical protein [Homo sapiens] 351 2e-97
gi|169163165 PREDICTED: hypothetical protein [Homo sapiens] 351 2e-97
gi|169163942 PREDICTED: hypothetical protein [Homo sapiens] 348 2e-96
gi|68303635 mutS homolog 3 [Homo sapiens] 35 0.025
gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens] 34 0.055
gi|29788760 diacylglycerol kinase, eta isoform 1 [Homo sapiens] 32 0.21
gi|29788751 diacylglycerol kinase, eta isoform 2 [Homo sapiens] 32 0.21
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 32 0.27
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 32 0.27
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 32 0.27
gi|22538470 eomesodermin [Homo sapiens] 31 0.61
gi|12707580 paired-like homeobox 2b [Homo sapiens] 31 0.61
gi|24497589 aristaless related homeobox [Homo sapiens] 30 0.80
gi|4758156 diacylglycerol kinase, iota [Homo sapiens] 30 0.80
gi|145207958 transmembrane protein 16G isoform NGEP long [Homo s... 30 1.0
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 30 1.0
gi|212274327 transmembrane protein 151B [Homo sapiens] 30 1.4
gi|145699105 connexin40.1 [Homo sapiens] 30 1.4
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 30 1.4
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 30 1.4
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 30 1.4
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 30 1.4
gi|126352608 elastin isoform e precursor [Homo sapiens] 29 1.8
gi|126352446 elastin isoform d precursor [Homo sapiens] 29 1.8
gi|126352322 elastin isoform c precursor [Homo sapiens] 29 1.8
gi|126352700 elastin isoform b precursor [Homo sapiens] 29 1.8
gi|126352440 elastin isoform a precursor [Homo sapiens] 29 1.8
gi|226371735 iroquois homeobox 3 [Homo sapiens] 29 1.8
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 29 1.8
gi|51093859 calcium channel, voltage-dependent, T type, alpha 1I... 29 1.8
>gi|169164134 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 351 bits (900), Expect = 2e-97
Identities = 173/173 (100%), Positives = 173/173 (100%)
Query: 1 MRLLWSSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSA 60
MRLLWSSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSA
Sbjct: 1 MRLLWSSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSA 60
Query: 61 AAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGPASLPLRLLRCQVSFGSWKQLFCP 120
AAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGPASLPLRLLRCQVSFGSWKQLFCP
Sbjct: 61 AAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGPASLPLRLLRCQVSFGSWKQLFCP 120
Query: 121 LPNPRLTATLYGERTKGRLLPEEISIWKSCRSQTTHTAIVTPACLVTCVSEKP 173
LPNPRLTATLYGERTKGRLLPEEISIWKSCRSQTTHTAIVTPACLVTCVSEKP
Sbjct: 121 LPNPRLTATLYGERTKGRLLPEEISIWKSCRSQTTHTAIVTPACLVTCVSEKP 173
>gi|169163165 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 351 bits (900), Expect = 2e-97
Identities = 173/173 (100%), Positives = 173/173 (100%)
Query: 1 MRLLWSSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSA 60
MRLLWSSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSA
Sbjct: 1 MRLLWSSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSA 60
Query: 61 AAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGPASLPLRLLRCQVSFGSWKQLFCP 120
AAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGPASLPLRLLRCQVSFGSWKQLFCP
Sbjct: 61 AAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGPASLPLRLLRCQVSFGSWKQLFCP 120
Query: 121 LPNPRLTATLYGERTKGRLLPEEISIWKSCRSQTTHTAIVTPACLVTCVSEKP 173
LPNPRLTATLYGERTKGRLLPEEISIWKSCRSQTTHTAIVTPACLVTCVSEKP
Sbjct: 121 LPNPRLTATLYGERTKGRLLPEEISIWKSCRSQTTHTAIVTPACLVTCVSEKP 173
>gi|169163942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 348 bits (892), Expect = 2e-96
Identities = 172/173 (99%), Positives = 172/173 (99%)
Query: 1 MRLLWSSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSA 60
MRLLWSSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGA EQLSA
Sbjct: 1 MRLLWSSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAEEQLSA 60
Query: 61 AAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGPASLPLRLLRCQVSFGSWKQLFCP 120
AAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGPASLPLRLLRCQVSFGSWKQLFCP
Sbjct: 61 AAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGPASLPLRLLRCQVSFGSWKQLFCP 120
Query: 121 LPNPRLTATLYGERTKGRLLPEEISIWKSCRSQTTHTAIVTPACLVTCVSEKP 173
LPNPRLTATLYGERTKGRLLPEEISIWKSCRSQTTHTAIVTPACLVTCVSEKP
Sbjct: 121 LPNPRLTATLYGERTKGRLLPEEISIWKSCRSQTTHTAIVTPACLVTCVSEKP 173
>gi|68303635 mutS homolog 3 [Homo sapiens]
Length = 1137
Score = 35.4 bits (80), Expect = 0.025
Identities = 28/65 (43%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 6 SSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAA 65
+S L S+SA R + S + S T SSTGA D A A +AAAAAA
Sbjct: 7 ASGGLAASSSAPARQAVLSRFFQSTGSLKST--SSSTGAADQVDPGAAA----AAAAAAA 60
Query: 66 AAPPA 70
AAPPA
Sbjct: 61 AAPPA 65
>gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens]
Length = 494
Score = 34.3 bits (77), Expect = 0.055
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 29 CSSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAAAA 67
CSS+SS + SS + AA P+GA ++AAAAAAA
Sbjct: 293 CSSASSCSSSASSCSSASAASTPSGAPTCCASAAAAAAA 331
>gi|29788760 diacylglycerol kinase, eta isoform 1 [Homo sapiens]
Length = 1164
Score = 32.3 bits (72), Expect = 0.21
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 44 AGGAADEPAGAGEQLSAAAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGPASLPL- 102
AGGAA AGAG +++AAA+A + D Q+ P K + + R S+
Sbjct: 14 AGGAA---AGAGAAVTSAAASAGPGEDSSDSEAEQEGPQKLIRKVSTSGQIRTKTSIKEG 70
Query: 103 RLLRCQVSFGSWKQLFCPLPNPRLTATLYGERTKGRLLPEEISI 146
+LL+ SF WK+ + L TLY + L+ +E+ +
Sbjct: 71 QLLKQTSSFQRWKKRYFKLRG----RTLYYAKDSKSLIFDEVDL 110
>gi|29788751 diacylglycerol kinase, eta isoform 2 [Homo sapiens]
Length = 1220
Score = 32.3 bits (72), Expect = 0.21
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 44 AGGAADEPAGAGEQLSAAAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGPASLPL- 102
AGGAA AGAG +++AAA+A + D Q+ P K + + R S+
Sbjct: 14 AGGAA---AGAGAAVTSAAASAGPGEDSSDSEAEQEGPQKLIRKVSTSGQIRTKTSIKEG 70
Query: 103 RLLRCQVSFGSWKQLFCPLPNPRLTATLYGERTKGRLLPEEISI 146
+LL+ SF WK+ + L TLY + L+ +E+ +
Sbjct: 71 QLLKQTSSFQRWKKRYFKLRG----RTLYYAKDSKSLIFDEVDL 110
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 32.0 bits (71), Expect = 0.27
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 23 SSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAAAAPPAAFDMVL-WQKWP 81
SSS SSSSS + SS+ + A +P A A PP FD +W
Sbjct: 94 SSSSSSSSSSSSSSSSSSSSSSSSQAKKP-----DPPLPPAFGAPPPPLFDAAFPTPQWG 148
Query: 82 GKGLSNHQEY---AKKRGPASLP 101
LS HQ K+ GPAS P
Sbjct: 149 IVDLSGHQHLFGNLKRGGPASGP 171
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 32.0 bits (71), Expect = 0.27
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 23 SSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAAAAPPAAFDMVL-WQKWP 81
SSS SSSSS + SS+ + A +P A A PP FD +W
Sbjct: 94 SSSSSSSSSSSSSSSSSSSSSSSSQAKKP-----DPPLPPAFGAPPPPLFDAAFPTPQWG 148
Query: 82 GKGLSNHQEY---AKKRGPASLP 101
LS HQ K+ GPAS P
Sbjct: 149 IVDLSGHQHLFGNLKRGGPASGP 171
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 32.0 bits (71), Expect = 0.27
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 6 SSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAA 65
SS + + S+S+ SSS SSSSS + SS+ + DE + AA A
Sbjct: 2631 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPT 2690
Query: 66 AAPPA 70
A P A
Sbjct: 2691 AGPSA 2695
Score = 26.9 bits (58), Expect = 8.8
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 6 SSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAA 65
SS + + S+S+ SSS SSSSS + SS+ + ++ + E S ++
Sbjct: 2625 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDE 2684
Query: 66 AAP 68
AAP
Sbjct: 2685 AAP 2687
Score = 26.9 bits (58), Expect = 8.8
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 6 SSIALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAA 65
SS + + S+S+ SSS SSSSS + SS+ + ++ S+ AA
Sbjct: 2627 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAA 2686
Query: 66 AAPPA 70
AP A
Sbjct: 2687 PAPTA 2691
>gi|22538470 eomesodermin [Homo sapiens]
Length = 686
Score = 30.8 bits (68), Expect = 0.61
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Query: 46 GAADEPAGAGEQLSAAAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGP----ASLP 101
G P G E SAAAAAAAA AA ++ LS+ + Y + GP + P
Sbjct: 103 GRKGSPCGEEELPSAAAAAAAAAAAA---AATARYSMDSLSSERYYLQSPGPQGSELAAP 159
Query: 102 LRLLRCQVSFGSWKQLFCPLPN 123
L Q + G+ P PN
Sbjct: 160 CSLFPYQAAAGAPHGPVYPAPN 181
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 30.8 bits (68), Expect = 0.61
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 41 STGAGGAADEPAGAGEQLSAAAAAAAAPPAA 71
+ G GG EP G +AAAAAAAA AA
Sbjct: 226 AAGPGGPGGEPGKGGAAAAAAAAAAAAAAAA 256
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 30.4 bits (67), Expect = 0.80
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 49 DEPAGAGEQLSAAAAAAAAPPAAFDMVLWQKWPGKGLSNHQEYAKKRGP 97
+ P GAG AAAAAAAA AA+D + + P +S + Y + P
Sbjct: 137 ERPDGAG----AAAAAAAAAAAAWDTLKISQAPQVSISRSKSYRENGAP 181
>gi|4758156 diacylglycerol kinase, iota [Homo sapiens]
Length = 1065
Score = 30.4 bits (67), Expect = 0.80
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 30 SSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAAAAPPAA 71
SSSS GA G AD P GAG +A AAA P AA
Sbjct: 69 SSSSGSGAGSCCLGAEGGAD-PRGAGSAAAAGAAALDEPAAA 109
>gi|145207958 transmembrane protein 16G isoform NGEP long [Homo
sapiens]
Length = 933
Score = 30.0 bits (66), Expect = 1.0
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 13 SASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAAAAPPAAF 72
S RRR + S + S + R S G+ A EP G+Q +A A + A P
Sbjct: 53 SRMLRRRAQEEDSTVLIDVSPPEAEKRGSYGSTAHASEP--GGQQAAACRAGSPAKPRIA 110
Query: 73 DMVL-WQK 79
D VL W++
Sbjct: 111 DFVLVWEE 118
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 30.0 bits (66), Expect = 1.0
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 16 ARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAAAAPP 69
A+R+ R SSS SSSSS + SS+ + ++ + + S++++ + A P
Sbjct: 2601 AKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKP 2654
Score = 29.6 bits (65), Expect = 1.4
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 13 SASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAAAAPP 69
S+S+ SSS SSSSS + SS+ + ++ PA G Q A+ PP
Sbjct: 2613 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPP 2669
Score = 28.9 bits (63), Expect = 2.3
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 14 ASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAAAAPPAAFD 73
A +RR SSS SSSSS + SS+ + ++ + + S++ + A P A
Sbjct: 2601 AKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALP 2660
Query: 74 MVLWQKWPGKG 84
K P G
Sbjct: 2661 KPASPKKPPPG 2671
>gi|212274327 transmembrane protein 151B [Homo sapiens]
Length = 566
Score = 29.6 bits (65), Expect = 1.4
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 40 SSTGAGGAADEPAGAGEQLSAAAAAAAA 67
S+ G GG P G E+L+AAAAAAAA
Sbjct: 11 SAAGGGGGGGGP-GVSEELTAAAAAAAA 37
>gi|145699105 connexin40.1 [Homo sapiens]
Length = 370
Score = 29.6 bits (65), Expect = 1.4
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 30 SSSSSDTLDRSSTGAGG--AADEPAGAG--EQLSAAAAAAAAPPA 70
+SS+S+ L R G AA +P G+G EQ SAA + AAPP+
Sbjct: 299 TSSASEKLGRQPRGRPHREAAQDPRGSGSEEQPSAAPSRLAAPPS 343
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 29.6 bits (65), Expect = 1.4
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 28 HCSSSSSDTLDRSSTGAG--GAADEPAGAGEQLSAAAAAAAAPPAA 71
H S S T D G G GAA EP GA Q +A PP A
Sbjct: 720 HAGSPSLKTPDGPVPGPGPQGAAPEPLGASVQRDSAQGRPCPPPQA 765
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 29.6 bits (65), Expect = 1.4
Identities = 16/25 (64%), Positives = 17/25 (68%)
Query: 43 GAGGAADEPAGAGEQLSAAAAAAAA 67
G GGA AGAG +AAAAAAAA
Sbjct: 267 GGGGAGAGGAGAGAVAAAAAAAAAA 291
Score = 27.3 bits (59), Expect = 6.7
Identities = 16/31 (51%), Positives = 16/31 (51%)
Query: 40 SSTGAGGAADEPAGAGEQLSAAAAAAAAPPA 70
S G GG GAG AAAAAAAA A
Sbjct: 262 SGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA 292
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 29.6 bits (65), Expect = 1.4
Identities = 16/25 (64%), Positives = 17/25 (68%)
Query: 43 GAGGAADEPAGAGEQLSAAAAAAAA 67
G GGA AGAG +AAAAAAAA
Sbjct: 267 GGGGAGAGGAGAGAVAAAAAAAAAA 291
Score = 27.3 bits (59), Expect = 6.7
Identities = 16/31 (51%), Positives = 16/31 (51%)
Query: 40 SSTGAGGAADEPAGAGEQLSAAAAAAAAPPA 70
S G GG GAG AAAAAAAA A
Sbjct: 262 SGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA 292
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 29.6 bits (65), Expect = 1.4
Identities = 16/25 (64%), Positives = 17/25 (68%)
Query: 43 GAGGAADEPAGAGEQLSAAAAAAAA 67
G GGA AGAG +AAAAAAAA
Sbjct: 267 GGGGAGAGGAGAGAVAAAAAAAAAA 291
Score = 27.3 bits (59), Expect = 6.7
Identities = 16/31 (51%), Positives = 16/31 (51%)
Query: 40 SSTGAGGAADEPAGAGEQLSAAAAAAAAPPA 70
S G GG GAG AAAAAAAA A
Sbjct: 262 SGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA 292
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 29.3 bits (64), Expect = 1.8
Identities = 19/42 (45%), Positives = 19/42 (45%)
Query: 43 GAGGAADEPAGAGEQLSAAAAAAAAPPAAFDMVLWQKWPGKG 84
GA G A P G G AAAAAAA A F PG G
Sbjct: 237 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVG 278
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 29.3 bits (64), Expect = 1.8
Identities = 19/42 (45%), Positives = 19/42 (45%)
Query: 43 GAGGAADEPAGAGEQLSAAAAAAAAPPAAFDMVLWQKWPGKG 84
GA G A P G G AAAAAAA A F PG G
Sbjct: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVG 283
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 29.3 bits (64), Expect = 1.8
Identities = 19/42 (45%), Positives = 19/42 (45%)
Query: 43 GAGGAADEPAGAGEQLSAAAAAAAAPPAAFDMVLWQKWPGKG 84
GA G A P G G AAAAAAA A F PG G
Sbjct: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVG 283
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 29.3 bits (64), Expect = 1.8
Identities = 19/42 (45%), Positives = 19/42 (45%)
Query: 43 GAGGAADEPAGAGEQLSAAAAAAAAPPAAFDMVLWQKWPGKG 84
GA G A P G G AAAAAAA A F PG G
Sbjct: 227 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVG 268
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 29.3 bits (64), Expect = 1.8
Identities = 19/42 (45%), Positives = 19/42 (45%)
Query: 43 GAGGAADEPAGAGEQLSAAAAAAAAPPAAFDMVLWQKWPGKG 84
GA G A P G G AAAAAAA A F PG G
Sbjct: 237 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVG 278
>gi|226371735 iroquois homeobox 3 [Homo sapiens]
Length = 501
Score = 29.3 bits (64), Expect = 1.8
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 14 ASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGE--QLSAAAAAAAA 67
ASA ++ +I S L +++S D RS GAGG+ A A QLS AAAAAAA
Sbjct: 341 ASALQKPKIWS--LAETATSPDNPRRSPPGAGGSPPGAAVAPSALQLSPAAAAAAA 394
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 29.3 bits (64), Expect = 1.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 43 GAGGAADEPAGAGEQLSAAAAAAAAPPAA 71
G GG++ PA ++AAAAAAA AA
Sbjct: 151 GGGGSSSSPAATSAAATSAAAAAAAAAAA 179
Score = 26.9 bits (58), Expect = 8.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 42 TGAGGAADEPAGAGEQLSAAAAAAAAPPAA 71
+G GG A G G S AA +AAA AA
Sbjct: 141 SGGGGGAGGGGGGGSSSSPAATSAAATSAA 170
>gi|51093859 calcium channel, voltage-dependent, T type, alpha 1I
subunit isoform b [Homo sapiens]
Length = 2188
Score = 29.3 bits (64), Expect = 1.8
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 8 IALTFSASARRRLRISSSLLHCSSSSSDTLDRSSTGAGGAADEPAGAGEQLSAAAAAAAA 67
IAL S ++ R R++ +LL ++ S +LD S + + G+ LS + A
Sbjct: 1953 IALQGSWASLRSPRVNCTLLRQATGSDTSLDASPSSSAGSLQTTLEDSLTLSDSPRRALG 2012
Query: 68 PPA 70
PPA
Sbjct: 2013 PPA 2015
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.128 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,586,982
Number of Sequences: 37866
Number of extensions: 353750
Number of successful extensions: 2742
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 2343
Number of HSP's gapped (non-prelim): 358
length of query: 173
length of database: 18,247,518
effective HSP length: 95
effective length of query: 78
effective length of database: 14,650,248
effective search space: 1142719344
effective search space used: 1142719344
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.