Guide to the Human Genome
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Name: GPRC5B Sequence: fasta or formatted (403aa) NCBI GI: 7706451
Description:

G protein-coupled receptor, family C, group 5, member B precursor

Referenced in:

G-Protein-coupled Receptors
Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         37           2
 C cysteine            2.2          9           1
 D aspartate           3.0         12           1
 E glutamate           4.2         17           2
 F phenylalanine       6.2         25           1
 G glycine             6.9         28           2
 H histidine           2.0          8           1
 I isoleucine          4.7         19           2
 K lysine              3.0         12           2
 L leucine            15.6         63           3
 M methionine          3.2         13           1
 N asparagine          2.7         11           1
 P proline             5.0         20           2
 Q glutamine           3.0         12           2
 R arginine            5.2         21           2
 S serine              5.0         20           1
 T threonine           6.2         25           1
 V valine              8.2         33           2
 W tryptophan          2.7         11           1
 Y tyrosine            1.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor, family C, group 5, member... 
GPRC5C                0.317   G protein-coupled receptor family C, group 5, member...
GPRC5C                0.317   G protein-coupled receptor family C, group 5, member...
GPRC5A                0.213   G protein-coupled receptor, family C, group 5, member...
GPRC5D                0.212   G protein-coupled receptor, family C, group 5, member...
GRM2                  0.053   glutamate receptor, metabotropic 2 isoform a precurs...
GRM3                  0.052   glutamate receptor, metabotropic 3 precursor 
GRM2                  0.039   glutamate receptor, metabotropic 2 isoform b 
GRM1                  0.036   glutamate receptor, metabotropic 1 isoform beta pre...
GRM1                  0.036   glutamate receptor, metabotropic 1 isoform alpha pr...
GRM8                  0.029   glutamate receptor, metabotropic 8 isoform b precur...
GRM8                  0.029   glutamate receptor, metabotropic 8 isoform a precur...
CASR                  0.029   calcium-sensing receptor 
GRM4                  0.028   glutamate receptor, metabotropic 4 
GRM7                  0.025   glutamate receptor, metabotropic 7 isoform b precurs...
GRM7                  0.025   glutamate receptor, metabotropic 7 isoform a precurso...
GRM6                  0.025   glutamate receptor, metabotropic 6 precursor 
GABBR2                0.019   G protein-coupled receptor 51 
GPRC6A                0.018   G protein-coupled receptor, family C, group 6, memb...
GPR156                0.015   G protein-coupled receptor 156 
FLVCR2                0.008   feline leukemia virus subgroup C cellular receptor ...
POM121C               0.006   POM121 membrane glycoprotein (rat)-like 
GPR171                0.006   G protein-coupled receptor 171 
POM121                0.006   nuclear pore membrane protein 121 
TMEM8B                0.005   transmembrane protein 8B isoform a 
TMEM8B                0.005   transmembrane protein 8B isoform a 
LOC100288540          0.005   PREDICTED: hypothetical protein XP_002342775 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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