Search of human proteins with 164565452

Search of human proteins with 164565452

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|164565452 hypothetical protein LOC9715 isoform a [Homo
sapiens]
         (360 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|164565452 hypothetical protein LOC9715 isoform a [Homo sapiens]    734   0.0  
gi|164519061 hypothetical protein LOC9715 isoform b [Homo sapiens]    677   0.0  
gi|40255251 hypothetical protein LOC131408 [Homo sapiens]             135   7e-32
gi|157502173 hypothetical protein LOC348487 [Homo sapiens]            118   7e-27
gi|4758696 mitogen-activated protein kinase kinase kinase 13 [Ho...    36   0.047
gi|13540549 potassium voltage-gated channel, subfamily H, member...    35   0.10 
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         34   0.23 
gi|168229226 hypothetical protein LOC401399 [Homo sapiens]             32   0.68 
gi|7662310 FERM, RhoGEF and pleckstrin domain protein 2 [Homo sa...    32   0.68 
gi|5031767 heat shock transcription factor 1 [Homo sapiens]            32   0.88 
gi|239756689 PREDICTED: WD repeat domain 81 [Homo sapiens]             32   1.2  
gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens]             32   1.2  
gi|239745674 PREDICTED: WD repeat domain 81 [Homo sapiens]             32   1.2  
gi|23957680 ral guanine nucleotide dissociation stimulator-like ...    32   1.2  
gi|169234659 tumor protein p63 isoform 3 [Homo sapiens]                31   1.5  
gi|169234657 tumor protein p63 isoform 2 [Homo sapiens]                31   1.5  
gi|31543818 tumor protein p63 isoform 1 [Homo sapiens]                 31   1.5  
gi|169167771 PREDICTED: similar to TBP-associated factor 11 [Hom...    31   1.5  
gi|239753992 PREDICTED: similar to TBP-associated factor 11 [Hom...    31   1.5  
gi|169167767 PREDICTED: similar to TBP-associated factor 11 [Hom...    31   1.5  
gi|169167754 PREDICTED: similar to TBP-associated factor 11 [Hom...    31   1.5  
gi|169167869 PREDICTED: similar to TBP-associated factor 11 [Hom...    31   1.5  
gi|239748525 PREDICTED: similar to TBP-associated factor 11 [Hom...    31   1.5  
gi|239748523 PREDICTED: similar to TBP-associated factor 11 [Hom...    31   1.5  
gi|239742504 PREDICTED: hypothetical protein XP_002342536 [Homo ...    31   1.5  
gi|239742502 PREDICTED: similar to TBP-associated factor 11 [Hom...    31   1.5  
gi|239742500 PREDICTED: similar to TBP-associated factor 11 [Hom...    31   1.5  
gi|239742498 PREDICTED: similar to TBP-associated factor 11 [Hom...    31   1.5  
gi|113416493 PREDICTED: similar to TBP-associated factor 11 [Hom...    31   1.5  
gi|113416499 PREDICTED: similar to TBP-associated factor 11 [Hom...    31   1.5  

>gi|164565452 hypothetical protein LOC9715 isoform a [Homo sapiens]
          Length = 360

 Score =  734 bits (1896), Expect = 0.0
 Identities = 360/360 (100%), Positives = 360/360 (100%)

Query: 1   MGCIGSRTVGNEVIAVDWKGLKDVDQINMDSTSSLHGSSLHRPSTEQTRTDFSWDGINLS 60
           MGCIGSRTVGNEVIAVDWKGLKDVDQINMDSTSSLHGSSLHRPSTEQTRTDFSWDGINLS
Sbjct: 1   MGCIGSRTVGNEVIAVDWKGLKDVDQINMDSTSSLHGSSLHRPSTEQTRTDFSWDGINLS 60

Query: 61  MEDTTSILPKLKRNSNAYGIGALAKSSFSGISRSMKDHVTKPTAMGQGRVAHMIEWQGWG 120
           MEDTTSILPKLKRNSNAYGIGALAKSSFSGISRSMKDHVTKPTAMGQGRVAHMIEWQGWG
Sbjct: 61  MEDTTSILPKLKRNSNAYGIGALAKSSFSGISRSMKDHVTKPTAMGQGRVAHMIEWQGWG 120

Query: 121 KTPAVQPQHSHESVRRDTDAYSDLSDGEKEARFLAGVMEQFAISEATLMAWSSMDGEDMS 180
           KTPAVQPQHSHESVRRDTDAYSDLSDGEKEARFLAGVMEQFAISEATLMAWSSMDGEDMS
Sbjct: 121 KTPAVQPQHSHESVRRDTDAYSDLSDGEKEARFLAGVMEQFAISEATLMAWSSMDGEDMS 180

Query: 181 VNSTQEPLGCNYSDNYQELMDSQDALAQAPMDGWPHSYVSQGMYCLGSSDAWEASDQSLI 240
           VNSTQEPLGCNYSDNYQELMDSQDALAQAPMDGWPHSYVSQGMYCLGSSDAWEASDQSLI
Sbjct: 181 VNSTQEPLGCNYSDNYQELMDSQDALAQAPMDGWPHSYVSQGMYCLGSSDAWEASDQSLI 240

Query: 241 ASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGP 300
           ASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGP
Sbjct: 241 ASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGP 300

Query: 301 AEEEKRPLAPEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEEEGEANN 360
           AEEEKRPLAPEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEEEGEANN
Sbjct: 301 AEEEKRPLAPEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEEEGEANN 360


>gi|164519061 hypothetical protein LOC9715 isoform b [Homo sapiens]
          Length = 332

 Score =  677 bits (1747), Expect = 0.0
 Identities = 332/332 (100%), Positives = 332/332 (100%)

Query: 29  MDSTSSLHGSSLHRPSTEQTRTDFSWDGINLSMEDTTSILPKLKRNSNAYGIGALAKSSF 88
           MDSTSSLHGSSLHRPSTEQTRTDFSWDGINLSMEDTTSILPKLKRNSNAYGIGALAKSSF
Sbjct: 1   MDSTSSLHGSSLHRPSTEQTRTDFSWDGINLSMEDTTSILPKLKRNSNAYGIGALAKSSF 60

Query: 89  SGISRSMKDHVTKPTAMGQGRVAHMIEWQGWGKTPAVQPQHSHESVRRDTDAYSDLSDGE 148
           SGISRSMKDHVTKPTAMGQGRVAHMIEWQGWGKTPAVQPQHSHESVRRDTDAYSDLSDGE
Sbjct: 61  SGISRSMKDHVTKPTAMGQGRVAHMIEWQGWGKTPAVQPQHSHESVRRDTDAYSDLSDGE 120

Query: 149 KEARFLAGVMEQFAISEATLMAWSSMDGEDMSVNSTQEPLGCNYSDNYQELMDSQDALAQ 208
           KEARFLAGVMEQFAISEATLMAWSSMDGEDMSVNSTQEPLGCNYSDNYQELMDSQDALAQ
Sbjct: 121 KEARFLAGVMEQFAISEATLMAWSSMDGEDMSVNSTQEPLGCNYSDNYQELMDSQDALAQ 180

Query: 209 APMDGWPHSYVSQGMYCLGSSDAWEASDQSLIASPATGSYLGPAFDDSQPSLHEMGPSQP 268
           APMDGWPHSYVSQGMYCLGSSDAWEASDQSLIASPATGSYLGPAFDDSQPSLHEMGPSQP
Sbjct: 181 APMDGWPHSYVSQGMYCLGSSDAWEASDQSLIASPATGSYLGPAFDDSQPSLHEMGPSQP 240

Query: 269 ASGYSALEPPPLLGGDTDWAPGVGAVDLARGPAEEEKRPLAPEEEEDAGCRDLESLSPRE 328
           ASGYSALEPPPLLGGDTDWAPGVGAVDLARGPAEEEKRPLAPEEEEDAGCRDLESLSPRE
Sbjct: 241 ASGYSALEPPPLLGGDTDWAPGVGAVDLARGPAEEEKRPLAPEEEEDAGCRDLESLSPRE 300

Query: 329 DPEMSTALSRKVSDVTSSGVQSFDEEEGEANN 360
           DPEMSTALSRKVSDVTSSGVQSFDEEEGEANN
Sbjct: 301 DPEMSTALSRKVSDVTSSGVQSFDEEEGEANN 332


>gi|40255251 hypothetical protein LOC131408 [Homo sapiens]
          Length = 335

 Score =  135 bits (339), Expect = 7e-32
 Identities = 109/284 (38%), Positives = 141/284 (49%), Gaps = 46/284 (16%)

Query: 90  GISRSMKDHVTKPTAMGQGRVAHMIEWQGWGKTPAVQPQHSHESVRRDTDAYSDLSDGEK 149
           GIS+ +KDHVTKPTAM QGRVAH+IEW+GW K     P  S  ++     +YSDLS+GE+
Sbjct: 78  GISQVVKDHVTKPTAMAQGRVAHLIEWKGWSK-----PSDSPAALESAFSSYSDLSEGEQ 132

Query: 150 EARFLAGVMEQFAISEATLMAWSSMDGEDMSVNSTQEPLGCNYSDNYQELMDSQDALAQA 209
           EARF AGV EQFAI+EA L AWSS+DGED + +S        Y +++   MD+ D   Q 
Sbjct: 133 EARFAAGVAEQFAIAEAKLRAWSSVDGEDSTDDS--------YDEDFAGGMDT-DMAGQL 183

Query: 210 PMDGWPHSYVSQGMYC-------LGSSDAWEASDQSLIASPATGSYLGPAFDDSQPSLHE 262
           P+   PH    Q ++        +        SD S   SP T          S  SL +
Sbjct: 184 PLG--PH---LQDLFTGHRFSRPVRQGSVEPESDCSQTVSPDT-------LCSSLCSLED 231

Query: 263 MGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGPAEEE---------KRPLAPEEE 313
                PA   S L    LL       P   +   + GP E +         +  L+P EE
Sbjct: 232 GLLGSPARLASQLLGDELLLAKL--PPSRESAFRSLGPLEAQDSLYNSPLTESCLSPAEE 289

Query: 314 EDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEEEGE 357
           E A C+D + L P      S    R+ SD+ SSGV S DE+E E
Sbjct: 290 EPAPCKDCQPLCP--PLTGSWERQRQASDLASSGVVSLDEDEAE 331


>gi|157502173 hypothetical protein LOC348487 [Homo sapiens]
          Length = 280

 Score =  118 bits (296), Expect = 7e-27
 Identities = 67/160 (41%), Positives = 89/160 (55%), Gaps = 8/160 (5%)

Query: 51  DFSWDGINLSMEDTTSILPKLKRNSNAYGIGALAKSSFSGISRSMKDHVTKPTAMGQGRV 110
           DF WD      + T   L   +     Y + ALA SS  G+ +S+KDH+TKPTAM +GRV
Sbjct: 51  DFCWDPWQRCFQTTNGYLSDSRSRPGNYNVAALATSSLVGVVQSIKDHITKPTAMARGRV 110

Query: 111 AHMIEWQGWGKTPAVQPQHSHESVRRDTDAYSDLSDGEKEARFLAGVMEQFAISEATLMA 170
           AH+IEW+GW   PA       E    + + Y  L D  +EARF AGV EQFAI+EATL A
Sbjct: 111 AHLIEWKGWSAQPA-----GWELSPAEDEHYCCLPDELREARFAAGVAEQFAITEATLSA 165

Query: 171 WSSMDGEDMSVNSTQEPLGCNYSDNYQELMDSQDALAQAP 210
           WSS+D E++  +    P G     + + +   QD+L   P
Sbjct: 166 WSSLDEEEL--HPENSPQGIVQLQDLESIY-LQDSLPSGP 202


>gi|4758696 mitogen-activated protein kinase kinase kinase 13 [Homo
           sapiens]
          Length = 966

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 31/162 (19%)

Query: 207 AQAPMDGWPHSYVSQGMYCLGSSDAWEASDQSLIASPATGSYLGPAFDDSQPSLHEMGPS 266
           AQ  + G     +S  M    ++D W +S+     +   G     A+D   P L +  P 
Sbjct: 687 AQRQLPGSSPDLISTAM----AADCWRSSEPDKGQAGPWGCCQADAYD---PCL-QCRPE 738

Query: 267 QPASGYSALEPPPLLGGDTDWAPGVG-AVDLARGPA-----EEEKRPLAPEEEEDAGCRD 320
           Q    Y +L+ P         A  VG + DL++ PA     E  +     EE E +GCR 
Sbjct: 739 Q----YGSLDIPS--------AEPVGRSPDLSKSPAHNPLLENAQSSEKTEENEFSGCRS 786

Query: 321 LESLSPREDPEMST--ALSRKVSDVTSSGVQSFDEEEGEANN 360
             SL       + T  AL RK   +  SG  S +EEEGE ++
Sbjct: 787 ESSLGTSH---LGTPPALPRKTRPLQKSGDDSSEEEEGEVDS 825


>gi|13540549 potassium voltage-gated channel, subfamily H, member 6
           isoform 1 [Homo sapiens]
          Length = 994

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 17/119 (14%)

Query: 242 SPATGSYLGPAFDDSQP-SLHEMGPSQPASGYSALEP--------PPLLGGDTDWAPGVG 292
           +P +  + G    D+Q  S HE+GP  P+ GYS L P         P   G  D AP + 
Sbjct: 728 APGSQDHQGFFLSDNQSGSPHELGPQFPSKGYSLLGPGSQNSMGAGPCAPGHPDAAPPLS 787

Query: 293 AVDLARGPAEE-------EKRPLAPEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVT 344
             D A G   E          P +P+E+ D     L S   +   +M+   SR  SD++
Sbjct: 788 ISD-ASGLWPELLQEMPPRHSPQSPQEDPDCWPLKLGSRLEQLQAQMNRLESRVSSDLS 845


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%)

Query: 259  SLHEMGPSQPASGYSALEP----PPLLGGDTDWAPGVGAVDLARGPAEEEKRPLAPE--E 312
            SL  +G   PA+G S  EP    P    GD    PG G         E+   P +P+  +
Sbjct: 2497 SLLSLGSYPPAAGSS--EPKAPWPKATDGDLAQEPGPGLT------FEDSGNPKSPDKAQ 2548

Query: 313  EEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEEEGEAN 359
             E  G  + ES S       S+  S   S  +SSG ++  EEEG+ N
Sbjct: 2549 AEQDGAEESESSS-----SSSSGSSSSSSSSSSSGSETEGEEEGDKN 2590


>gi|168229226 hypothetical protein LOC401399 [Homo sapiens]
          Length = 899

 Score = 32.3 bits (72), Expect = 0.68
 Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 13/112 (11%)

Query: 226 LGSSDAWEASDQSLIASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDT 285
           L S  AW A      +S ++GS+ G + D S   L       P      +  PP   G +
Sbjct: 789 LPSPGAWPAG-----SSVSSGSFCGLSRDSSSMLLCSSPDRPPRCPLVCVLSPPRPSGSS 843

Query: 286 DWAPGVGAVDLARGPAEEEKRPLAPEEEEDA--------GCRDLESLSPRED 329
              P  G+      P+ +   P +  + E+A         CR ++ LS   D
Sbjct: 844 PSLPASGSYQALSPPSRDSPEPASELQAEEALLQEQFLDACRQIDELSVGSD 895


>gi|7662310 FERM, RhoGEF and pleckstrin domain protein 2 [Homo
           sapiens]
          Length = 1054

 Score = 32.3 bits (72), Expect = 0.68
 Identities = 30/103 (29%), Positives = 37/103 (35%), Gaps = 3/103 (2%)

Query: 228 SSDAWEASDQSLIASPATGSYLGP-AFDDSQPSLHEMGPS--QPASGYSALEPPPLLGGD 284
           SS +      S + SPA     G  A     PS   +GP   QP  G S   P P     
Sbjct: 425 SSSSLTDPQVSYVKSPAAERRSGAVAGGPDTPSAQPLGPPALQPGPGLSTKSPQPSPSSR 484

Query: 285 TDWAPGVGAVDLARGPAEEEKRPLAPEEEEDAGCRDLESLSPR 327
                   A  +  GPAE+   PL      DAG   ++   PR
Sbjct: 485 KSPLSLSPAFQVPLGPAEQGSSPLLSPVLSDAGGAGMDCEEPR 527


>gi|5031767 heat shock transcription factor 1 [Homo sapiens]
          Length = 529

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 10/112 (8%)

Query: 228 SSDAWEASDQSLIASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGG---D 284
           +S      ++ L +SP       P      P + E  P +P+S  + L P  L+     +
Sbjct: 278 ASPGGSIDERPLSSSPLVRVKEEPPSPPQSPRVEEASPGRPSSVDTLLSPTALIDSILRE 337

Query: 285 TDWAP-GVGAVDLARGPAEEEKRP------LAPEEEEDAGCRDLESLSPRED 329
           ++ AP  V A+  ARG  + E RP        PE+     C D   LS   D
Sbjct: 338 SEPAPASVTALTDARGHTDTEGRPPSPPPTSTPEKCLSVACLDKNELSDHLD 389


>gi|239756689 PREDICTED: WD repeat domain 81 [Homo sapiens]
          Length = 1941

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 241  ASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGP 300
            AS      L  A ++ +  L   GP   A G    E  P+  G+   + G+G  D   G 
Sbjct: 1017 ASQEESKDLAGAAEEEESGLPGAGPGSCAFG----EEIPM-DGEPPASSGLGLPDYTSGV 1071

Query: 301  AEEEKRPLAPEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEE 354
            +  ++  L   E+  AG    ES  P+E   +S     ++SD +S+   S  EE
Sbjct: 1072 SFHDQADLPETEDFQAGLYVTESPQPQEAEAVSLG---RLSDKSSTSETSLGEE 1122


>gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens]
          Length = 2240

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 241  ASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGP 300
            AS      L  A ++ +  L   GP   A G    E  P+  G+   + G+G  D   G 
Sbjct: 1316 ASQEESKDLAGAAEEEESGLPGAGPGSCAFG----EEIPM-DGEPPASSGLGLPDYTSGV 1370

Query: 301  AEEEKRPLAPEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEE 354
            +  ++  L   E+  AG    ES  P+E   +S     ++SD +S+   S  EE
Sbjct: 1371 SFHDQADLPETEDFQAGLYVTESPQPQEAEAVSLG---RLSDKSSTSETSLGEE 1421


>gi|239745674 PREDICTED: WD repeat domain 81 [Homo sapiens]
          Length = 1941

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 241  ASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGP 300
            AS      L  A ++ +  L   GP   A G    E  P+  G+   + G+G  D   G 
Sbjct: 1017 ASQEESKDLAGAAEEEESGLPGAGPGSCAFG----EEIPM-DGEPPASSGLGLPDYTSGV 1071

Query: 301  AEEEKRPLAPEEEEDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEE 354
            +  ++  L   E+  AG    ES  P+E   +S     ++SD +S+   S  EE
Sbjct: 1072 SFHDQADLPETEDFQAGLYVTESPQPQEAEAVSLG---RLSDKSSTSETSLGEE 1122


>gi|23957680 ral guanine nucleotide dissociation stimulator-like 4
           [Homo sapiens]
          Length = 473

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 28/111 (25%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 233 EASDQSLIASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVG 292
           EA        P   +   PA + + P L ++GP+      +AL PP  L      AP  G
Sbjct: 120 EAKPDDPAPRPGQHALTMPALEPAPPLLADLGPALEPESPAALGPPGYLHSAPGPAPAPG 179

Query: 293 AVDLARGPAEEEKRPLAPEEEEDAGCRDLESLSPRED-PEMSTALSRKVSD 342
                 GP            E    CR      P E+ P+M+T   R +++
Sbjct: 180 -----EGPPPGTVLEPQSAPESSCPCRGSVKNQPSEELPDMTTFPPRLLAE 225


>gi|169234659 tumor protein p63 isoform 3 [Homo sapiens]
          Length = 487

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 18/125 (14%)

Query: 177 EDMSVNSTQEPLGCNYSDNYQELMDS---QDALAQAPMDGWPHSYVSQGMYCLGSSDAWE 233
           + + +N   EP     ++  +  MD    QD+    PM  WP  Y + G+  L S D   
Sbjct: 70  QPIDLNFVDEPSEDGATNKIEISMDCIRMQDSDLSDPM--WPQ-YTNLGL--LNSMD--- 121

Query: 234 ASDQSLIASPATGSYLGPAFDDSQPSLHEMGP-SQPASGYSALEPPPLLGGDTDWAPGVG 292
              Q    S +T  Y     D +Q S+    P +QP+S + AL P P +  +TD+ PG  
Sbjct: 122 --QQIQNGSSSTSPY---NTDHAQNSVTAPSPYAQPSSTFDALSPSPAIPSNTDY-PGPH 175

Query: 293 AVDLA 297
           + D++
Sbjct: 176 SFDVS 180


>gi|169234657 tumor protein p63 isoform 2 [Homo sapiens]
          Length = 555

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 18/125 (14%)

Query: 177 EDMSVNSTQEPLGCNYSDNYQELMDS---QDALAQAPMDGWPHSYVSQGMYCLGSSDAWE 233
           + + +N   EP     ++  +  MD    QD+    PM  WP  Y + G+  L S D   
Sbjct: 70  QPIDLNFVDEPSEDGATNKIEISMDCIRMQDSDLSDPM--WPQ-YTNLGL--LNSMD--- 121

Query: 234 ASDQSLIASPATGSYLGPAFDDSQPSLHEMGP-SQPASGYSALEPPPLLGGDTDWAPGVG 292
              Q    S +T  Y     D +Q S+    P +QP+S + AL P P +  +TD+ PG  
Sbjct: 122 --QQIQNGSSSTSPY---NTDHAQNSVTAPSPYAQPSSTFDALSPSPAIPSNTDY-PGPH 175

Query: 293 AVDLA 297
           + D++
Sbjct: 176 SFDVS 180


>gi|31543818 tumor protein p63 isoform 1 [Homo sapiens]
          Length = 680

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 18/125 (14%)

Query: 177 EDMSVNSTQEPLGCNYSDNYQELMDS---QDALAQAPMDGWPHSYVSQGMYCLGSSDAWE 233
           + + +N   EP     ++  +  MD    QD+    PM  WP  Y + G+  L S D   
Sbjct: 70  QPIDLNFVDEPSEDGATNKIEISMDCIRMQDSDLSDPM--WPQ-YTNLGL--LNSMD--- 121

Query: 234 ASDQSLIASPATGSYLGPAFDDSQPSLHEMGP-SQPASGYSALEPPPLLGGDTDWAPGVG 292
              Q    S +T  Y     D +Q S+    P +QP+S + AL P P +  +TD+ PG  
Sbjct: 122 --QQIQNGSSSTSPY---NTDHAQNSVTAPSPYAQPSSTFDALSPSPAIPSNTDY-PGPH 175

Query: 293 AVDLA 297
           + D++
Sbjct: 176 SFDVS 180


>gi|169167771 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 164 WGETPPLQPKHLREAVRR 181


>gi|239753992 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 164 WGETPPLQPKHLREAVRR 181


>gi|169167767 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 197

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 163 WGETPPLQPKHLREAVRR 180


>gi|169167754 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 164 WGETPPLQPKHLREAVRR 181


>gi|169167869 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 197

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 163 WGETPPLQPKHLREAVRR 180


>gi|239748525 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 164 WGETPPLQPKHLREAVRR 181


>gi|239748523 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 164 WGETPPLQPKHLREAVRR 181


>gi|239742504 PREDICTED: hypothetical protein XP_002342536 [Homo
           sapiens]
          Length = 197

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 163 WGETPPLQPKHLREAVRR 180


>gi|239742502 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 164 WGETPPLQPKHLREAVRR 181


>gi|239742500 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 164 WGETPPLQPKHLREAVRR 181


>gi|239742498 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 164 WGETPPLQPKHLREAVRR 181


>gi|113416493 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 164 WGETPPLQPKHLREAVRR 181


>gi|113416499 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 119 WGKTPAVQPQHSHESVRR 136
           WG+TP +QP+H  E+VRR
Sbjct: 164 WGETPPLQPKHLREAVRR 181


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.126    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,223,634
Number of Sequences: 37866
Number of extensions: 770854
Number of successful extensions: 2321
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 2253
Number of HSP's gapped (non-prelim): 132
length of query: 360
length of database: 18,247,518
effective HSP length: 103
effective length of query: 257
effective length of database: 14,347,320
effective search space: 3687261240
effective search space used: 3687261240
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.