Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MAP3K13 Sequence: fasta or formatted (966aa) NCBI GI: 4758696
Description:

mitogen-activated protein kinase kinase kinase 13

Referenced in:

MAP Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         55           3
 C cysteine            2.2         21           2
 D aspartate           5.2         50           2
 E glutamate           8.7         84           4
 F phenylalanine       2.6         25           1
 G glycine             5.8         56           2
 H histidine           3.9         38           3
 I isoleucine          4.2         41           2
 K lysine              5.8         56           2
 L leucine             8.2         79           2
 M methionine          2.2         21           1
 N asparagine          3.4         33           2
 P proline             6.4         62           3
 Q glutamine           5.1         49           3
 R arginine            6.0         58           4
 S serine             11.6        112           3
 T threonine           5.1         49           3
 V valine              4.3         42           2
 W tryptophan          1.3         13           1
 Y tyrosine            2.3         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase kinase kinase 13 [Ho... 
MAP3K12               0.421   mitogen-activated protein kinase kinase kinase 12 [H...
MAP3K10               0.121   mitogen-activated protein kinase kinase kinase 10 [H...
MAP3K11               0.118   mitogen-activated protein kinase kinase kinase 11 [Ho...
KIAA1804              0.112   mixed lineage kinase 4 
MAP3K9                0.112   mitogen-activated protein kinase kinase kinase 9 [Ho...
ZAK                   0.095   MLK-related kinase isoform 2 
ZAK                   0.093   MLK-related kinase isoform 1 
MAP3K7                0.065   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.065   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.065   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.065   mitogen-activated protein kinase kinase kinase 7 isof...
BRAF                  0.063   B-Raf 
BMX                   0.063   BMX non-receptor tyrosine kinase 
BMX                   0.063   BMX non-receptor tyrosine kinase 
ABL2                  0.062   arg tyrosine kinase isoform c 
ABL2                  0.062   arg tyrosine kinase isoform b 
ABL2                  0.062   arg tyrosine kinase isoform e 
ABL2                  0.062   arg tyrosine kinase isoform d 
ABL2                  0.062   arg tyrosine kinase isoform a 
FRK                   0.061   fyn-related kinase 
TEC                   0.060   tec protein tyrosine kinase 
ABL1                  0.060   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.060   c-abl oncogene 1, receptor tyrosine kinase isoform b...
LCK                   0.060   lymphocyte-specific protein tyrosine kinase precurs...
LCK                   0.060   lymphocyte-specific protein tyrosine kinase precurs...
FES                   0.060   feline sarcoma oncogene isoform 4 
FES                   0.060   feline sarcoma oncogene isoform 3 
FES                   0.060   feline sarcoma oncogene isoform 2 
FES                   0.060   feline sarcoma oncogene isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press