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Search of human proteins with 16445421
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16445421 secretory carrier membrane protein 3 isoform 2
[Homo sapiens]
(321 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16445421 secretory carrier membrane protein 3 isoform 2 [Homo... 654 0.0
gi|16445419 secretory carrier membrane protein 3 isoform 1 [Homo... 640 0.0
gi|116256358 secretory carrier membrane protein 1 [Homo sapiens] 338 4e-93
gi|5730031 secretory carrier membrane protein 2 [Homo sapiens] 321 5e-88
gi|20373183 secretory carrier membrane protein 5 [Homo sapiens] 229 2e-60
gi|17738287 secretory carrier membrane protein 4 [Homo sapiens] 214 8e-56
gi|40353727 synaptopodin isoform A [Homo sapiens] 42 6e-04
gi|150170670 piccolo isoform 2 [Homo sapiens] 42 0.001
gi|150378539 piccolo isoform 1 [Homo sapiens] 42 0.001
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 41 0.001
gi|8659574 transcription factor E3 [Homo sapiens] 41 0.002
gi|56682953 epidermal growth factor receptor pathway substrate 8... 40 0.002
gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [... 40 0.002
gi|61966923 forkhead box B2 [Homo sapiens] 40 0.002
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens] 40 0.003
gi|113416187 PREDICTED: hypothetical protein [Homo sapiens] 40 0.003
gi|113415691 PREDICTED: hypothetical protein [Homo sapiens] 40 0.003
gi|195947369 junction-mediating and regulatory protein [Homo sap... 40 0.003
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 40 0.004
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 40 0.004
gi|24497513 homeobox A3 isoform a [Homo sapiens] 39 0.005
gi|13562112 homeobox A3 isoform a [Homo sapiens] 39 0.005
gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo ... 39 0.005
gi|158534059 formin binding protein 4 [Homo sapiens] 39 0.006
gi|40807465 zinc finger protein 341 [Homo sapiens] 39 0.006
gi|19923391 homeobox D3 [Homo sapiens] 39 0.008
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 38 0.011
gi|39812378 RAN binding protein 9 [Homo sapiens] 38 0.011
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 38 0.011
gi|169215927 PREDICTED: hypothetical protein [Homo sapiens] 38 0.014
>gi|16445421 secretory carrier membrane protein 3 isoform 2 [Homo
sapiens]
Length = 321
Score = 654 bits (1687), Expect = 0.0
Identities = 321/321 (100%), Positives = 321/321 (100%)
Query: 1 MAQSRDGGNPFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSY 60
MAQSRDGGNPFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSY
Sbjct: 1 MAQSRDGGNPFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSY 60
Query: 61 STQASAAAATAELLKKQEELNRKAEELDRRERELQHAALGGTATRQNNWPPLPSFCPVQP 120
STQASAAAATAELLKKQEELNRKAEELDRRERELQHAALGGTATRQNNWPPLPSFCPVQP
Sbjct: 61 STQASAAAATAELLKKQEELNRKAEELDRRERELQHAALGGTATRQNNWPPLPSFCPVQP 120
Query: 121 CFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLASFCVETNNGAGFGLSILWV 180
CFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLASFCVETNNGAGFGLSILWV
Sbjct: 121 CFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLASFCVETNNGAGFGLSILWV 180
Query: 181 LLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFVLQAIGIPGWGFSGWISAL 240
LLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFVLQAIGIPGWGFSGWISAL
Sbjct: 181 LLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFVLQAIGIPGWGFSGWISAL 240
Query: 241 VVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNP 300
VVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNP
Sbjct: 241 VVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNP 300
Query: 301 AVRTAAANAAAGAAENAFRAP 321
AVRTAAANAAAGAAENAFRAP
Sbjct: 301 AVRTAAANAAAGAAENAFRAP 321
>gi|16445419 secretory carrier membrane protein 3 isoform 1 [Homo
sapiens]
Length = 347
Score = 640 bits (1650), Expect = 0.0
Identities = 321/347 (92%), Positives = 321/347 (92%), Gaps = 26/347 (7%)
Query: 1 MAQSRDGGNPFAEPSELDNPFQ--------------------------PPPAYEPPAPAP 34
MAQSRDGGNPFAEPSELDNPFQ PPPAYEPPAPAP
Sbjct: 1 MAQSRDGGNPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAP 60
Query: 35 LPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRREREL 94
LPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRREREL
Sbjct: 61 LPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRREREL 120
Query: 95 QHAALGGTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLL 154
QHAALGGTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLL
Sbjct: 121 QHAALGGTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLL 180
Query: 155 NFLACLASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIF 214
NFLACLASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIF
Sbjct: 181 NFLACLASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIF 240
Query: 215 FVQDVLFVLQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRI 274
FVQDVLFVLQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRI
Sbjct: 241 FVQDVLFVLQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRI 300
Query: 275 HSLYRRTGASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP 321
HSLYRRTGASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP
Sbjct: 301 HSLYRRTGASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP 347
>gi|116256358 secretory carrier membrane protein 1 [Homo sapiens]
Length = 338
Score = 338 bits (867), Expect = 4e-93
Identities = 181/335 (54%), Positives = 223/335 (66%), Gaps = 31/335 (9%)
Query: 9 NPFAEPSELDNPFQPPPA-------------YEP------PAPAPLPPPSAPSLQPSRKL 49
NPFA+P +L+NPF+ P Y P P P + P+ P+ QP+ +
Sbjct: 7 NPFADP-DLNNPFKDPSVTQVTRNVPPGLDEYNPFSDSRTPPPGGVKMPNVPNTQPAI-M 64
Query: 50 SPTEPKNYGSYSTQASA-AAATAELLKKQEELNRKAEELDRRERELQHAALGGTATRQNN 108
PTE + +Y+ A A A AELLK+QEEL RKA ELDRRERE+Q+ + G R+NN
Sbjct: 65 KPTE--EHPAYTQIAKEHALAQAELLKRQEELERKAAELDRREREMQNLSQHG---RKNN 119
Query: 109 WPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLASFCVETN 168
WPPLPS PV PCF+QD S++IP EFQKTV MYYLWM + L LN CLA FCV++
Sbjct: 120 WPPLPSNFPVGPCFYQDFSVDIPVEFQKTVKLMYYLWMFHAVTLFLNIFGCLAWFCVDSA 179
Query: 169 NGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFVLQAIGI 228
FGLSILW LLFTPCSFVCWYRP+Y AFRSDSSF FFVFFF++ Q + VLQA G
Sbjct: 180 RAVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAVHVLQAAGF 239
Query: 229 PGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTGASFQKA 288
WG GWIS+L N V ++M+++A LFT AV+ +VM K++H LYR TGASF+KA
Sbjct: 240 HNWGNCGWISSLTGLNQNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTGASFEKA 299
Query: 289 QQEFAAGVFSNPAVRTAAAN----AAAGAAENAFR 319
QQEFA GV SN V+TAAAN AA+ AA+NAF+
Sbjct: 300 QQEFATGVMSNKTVQTAAANAASTAASSAAQNAFK 334
>gi|5730031 secretory carrier membrane protein 2 [Homo sapiens]
Length = 329
Score = 321 bits (823), Expect = 5e-88
Identities = 168/329 (51%), Positives = 224/329 (68%), Gaps = 34/329 (10%)
Query: 9 NPFAEPSELDNPFQPP-----------------PAYEPPAPAPLPPPSAPS------LQP 45
NPFA+P ++ NPFQ P P E A +P P LQP
Sbjct: 7 NPFADPVDV-NPFQDPSVTQLTNAPQGGLAEFNPFSETNAATTVPVTQLPGSSQPAVLQP 65
Query: 46 SRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERELQHAALGGTATR 105
S + PT+P + QA +AA A LL++QEEL+RKA EL+R+ERELQ+ + R
Sbjct: 66 S--VEPTQP------TPQAVVSAAQAGLLRQQEELDRKAAELERKERELQNT-VANLHVR 116
Query: 106 QNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLASFCV 165
QNNWPPLPS+CPV+PCF+QD S EIP ++Q+ +YYLWM ++ L LN LACLA F
Sbjct: 117 QNNWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACLAWFSG 176
Query: 166 ETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFVLQA 225
++ G FGLSILW L+FTPC+F+CWYRP+YKAFRSD+SF+FFVFFF+FF Q ++++Q
Sbjct: 177 NSSKGVDFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSFFVFFFVFFCQIGIYIIQL 236
Query: 226 IGIPGWGFSGWISAL-VVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTGAS 284
+GIPG G SGWI+AL + + A+SV+M++VA FT AVL + +L+R+HSLYRRTGAS
Sbjct: 237 VGIPGLGDSGWIAALSTLDNHSLAISVIMMVVAGFFTLCAVLSVFLLQRVHSLYRRTGAS 296
Query: 285 FQKAQQEFAAGVFSNPAVRTAAANAAAGA 313
FQ+AQ+EF+ G+FS+ AA++AA GA
Sbjct: 297 FQQAQEEFSQGIFSSRTFHRAASSAAQGA 325
>gi|20373183 secretory carrier membrane protein 5 [Homo sapiens]
Length = 235
Score = 229 bits (584), Expect = 2e-60
Identities = 101/219 (46%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Query: 103 ATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLAS 162
A + NN+PPLP F P++PCF+QD +IP + +YYLWM +++ L +N + CLA
Sbjct: 2 AEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLA- 60
Query: 163 FCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFV 222
+ + FGL+ LW++LFTPCS+VCW+RP+YKAF++DSSF+F FFF F Q V+ +
Sbjct: 61 WLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISI 120
Query: 223 LQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTG 282
+QA+GIPGWG GWI+ + N +V+ML+ ++FT +AV + L +H YR +G
Sbjct: 121 IQAVGIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSG 180
Query: 283 ASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP 321
SF KAQ+E+ G + NP V+ AA NAA GAA+ A P
Sbjct: 181 GSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMNQP 219
>gi|17738287 secretory carrier membrane protein 4 [Homo sapiens]
Length = 229
Score = 214 bits (545), Expect = 8e-56
Identities = 102/208 (49%), Positives = 140/208 (67%), Gaps = 1/208 (0%)
Query: 105 RQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLASFC 164
++NN+PPLP F PV+PCF+Q+ S EIP E Q V +Y LWM L +N +ACLA +
Sbjct: 4 KENNFPPLPKFIPVKPCFYQNFSDEIPVEHQVLVKRIYRLWMFYCATLGVNLIACLA-WW 62
Query: 165 VETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFVLQ 224
+ +G FGL+ +W+LLFTPC +VCW+RP+YKAFR+DSSFNF FFFIF Q VL V+Q
Sbjct: 63 IGGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSSFNFMAFFFIFGAQFVLTVIQ 122
Query: 225 AIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTGAS 284
AIG GWG GW+SA+ + + +V+MLL A++F+ A + + + ++H +YR G S
Sbjct: 123 AIGFSGWGACGWLSAIGFFQYSPGAAVVMLLPAIMFSVSAAMMAIAIMKVHRIYRGAGGS 182
Query: 285 FQKAQQEFAAGVFSNPAVRTAAANAAAG 312
FQKAQ E+ G + NP R A N +G
Sbjct: 183 FQKAQTEWNTGTWRNPPSREAQYNNFSG 210
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 42.4 bits (98), Expect = 6e-04
Identities = 22/53 (41%), Positives = 26/53 (49%)
Query: 2 AQSRDGGNPFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEP 54
A R +P + +E PF PP A PP P P PPP S QP+R S P
Sbjct: 764 AARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVP 816
Score = 31.2 bits (69), Expect = 1.3
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 10/50 (20%)
Query: 14 PSELDNPFQPPPAYEP--------PAPAPLPPPSAPSLQPSRKLSPTEPK 55
PS LD P P +EP P P P PPP +PS R +SP P+
Sbjct: 696 PSSLDGWVSPGP-WEPGRGSSMSSPPPLPPPPPMSPSWS-ERSVSPLRPE 743
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/46 (47%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 10 PFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPK 55
PF S LD QPPP PP P P PPP P P PT PK
Sbjct: 2392 PFFRSSSLDISAQPPPPPPPPPPPPPPPPPPP---PPPLPPPTSPK 2434
Score = 37.4 bits (85), Expect = 0.018
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 19/156 (12%)
Query: 10 PFAEPSELDNPFQPPPAYEPPA-PAPLPPPSA--PSLQPS-----------RKLSPTEPK 55
P PS+L P +PPP PA P P P SA PS QP K SP +P
Sbjct: 466 PTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPG 525
Query: 56 NYGSYSTQASAAAATAEL---LKKQEELNRKAEELDRRERELQHAALGGTATRQNNWPPL 112
+ S Q +A +A+ K + + K + LQ + +A + +
Sbjct: 526 STKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQGLP 585
Query: 113 PSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCS 148
+ CP+ C ++ + +P++ T +CS
Sbjct: 586 KTICPL--CNTTELLLHVPEKANFNTCTECQTTVCS 619
Score = 34.3 bits (77), Expect = 0.15
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 20 PFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLK 75
P PPP PP P P P P++ P +KL+ P + A T +L+
Sbjct: 2414 PPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLETTAVLR 2469
Score = 30.8 bits (68), Expect = 1.7
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 22 QPPPAYEPPAPAPLPPPSAPSLQ---PSRKLSPTEPKNYGSYSTQASAAAATAELLKKQE 78
QPP A PAP PS PS Q P P +PK + S+++AT +
Sbjct: 722 QPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSS 781
Query: 79 ELNRKAEE 86
++ +AEE
Sbjct: 782 KVQSQAEE 789
Score = 28.9 bits (63), Expect = 6.4
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 10/56 (17%)
Query: 9 NPFAEPSELDNPFQPP---PAYEPPAPAPLPPPSAPS-------LQPSRKLSPTEP 54
+P P + P +PP P +E P P PP+ PS QP P +P
Sbjct: 300 SPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQP 355
Score = 28.5 bits (62), Expect = 8.4
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 13 EPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQP-SRKLSPTEP 54
+P + P QPP +PPA PL P P+ Q S K S +P
Sbjct: 345 QPGTVKPPVQPPGTTKPPA-QPLGPAKPPAQQTGSEKPSSEQP 386
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/46 (47%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 10 PFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPK 55
PF S LD QPPP PP P P PPP P P PT PK
Sbjct: 2392 PFFRSSSLDISAQPPPPPPPPPPPPPPPPPPP---PPPLPPPTSPK 2434
Score = 37.4 bits (85), Expect = 0.018
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 19/156 (12%)
Query: 10 PFAEPSELDNPFQPPPAYEPPA-PAPLPPPSA--PSLQPS-----------RKLSPTEPK 55
P PS+L P +PPP PA P P P SA PS QP K SP +P
Sbjct: 466 PTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPG 525
Query: 56 NYGSYSTQASAAAATAEL---LKKQEELNRKAEELDRRERELQHAALGGTATRQNNWPPL 112
+ S Q +A +A+ K + + K + LQ + +A + +
Sbjct: 526 STKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQGLP 585
Query: 113 PSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCS 148
+ CP+ C ++ + +P++ T +CS
Sbjct: 586 KTICPL--CNTTELLLHVPEKANFNTCTECQTTVCS 619
Score = 34.3 bits (77), Expect = 0.15
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 20 PFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLK 75
P PPP PP P P P P++ P +KL+ P + A T +L+
Sbjct: 2414 PPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLETTAVLR 2469
Score = 30.8 bits (68), Expect = 1.7
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 22 QPPPAYEPPAPAPLPPPSAPSLQ---PSRKLSPTEPKNYGSYSTQASAAAATAELLKKQE 78
QPP A PAP PS PS Q P P +PK + S+++AT +
Sbjct: 722 QPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSS 781
Query: 79 ELNRKAEE 86
++ +AEE
Sbjct: 782 KVQSQAEE 789
Score = 28.9 bits (63), Expect = 6.4
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 10/56 (17%)
Query: 9 NPFAEPSELDNPFQPP---PAYEPPAPAPLPPPSAPS-------LQPSRKLSPTEP 54
+P P + P +PP P +E P P PP+ PS QP P +P
Sbjct: 300 SPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQP 355
Score = 28.5 bits (62), Expect = 8.4
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 13 EPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQP-SRKLSPTEP 54
+P + P QPP +PPA PL P P+ Q S K S +P
Sbjct: 345 QPGTVKPPVQPPGTTKPPA-QPLGPAKPPAQQTGSEKPSSEQP 386
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 41.2 bits (95), Expect = 0.001
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 16/116 (13%)
Query: 6 DGGN-PFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLS-------------- 50
DGG P PS + P P+ P+P P PPP AP P+ +
Sbjct: 181 DGGPAPPPAPSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPTDEAYSP 240
Query: 51 -PTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERELQHAALGGTATR 105
P + Y + S +++A +EE + EE + E E + L + +R
Sbjct: 241 PPAPEQKYDPFEPTGSNPSSSAGTPSPEEEEEEEEEEEEEEEDEEEEEGLSQSISR 296
Score = 35.0 bits (79), Expect = 0.089
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 30 PAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAAT 70
P+PAP P P+A + P+RK S E K G AS+++ T
Sbjct: 499 PSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGT 539
Score = 32.7 bits (73), Expect = 0.44
Identities = 29/104 (27%), Positives = 39/104 (37%), Gaps = 16/104 (15%)
Query: 2 AQSRDGGNPFAEPSELDNPFQPPPAY-EPPAPA-----------PLPPPSAPSLQPSRKL 49
A S +P PS PPP PPAP P +P P +K
Sbjct: 189 APSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPTDEAYSPPPAPEQKY 248
Query: 50 SPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERE 93
P EP S +S+A + +++EE + EE D E E
Sbjct: 249 DPFEPTG----SNPSSSAGTPSPEEEEEEEEEEEEEEEDEEEEE 288
Score = 28.9 bits (63), Expect = 6.4
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 30 PAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDR 89
P+PAP P L S LS E S + + AA++ +++ RKA +
Sbjct: 718 PSPAPASSPKREVLYDSEGLSGEERGGKSSQKDRRRSGAASSSSSSREKGSRRKALDGGD 777
Query: 90 RERE 93
R+R+
Sbjct: 778 RDRD 781
Score = 28.9 bits (63), Expect = 6.4
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 14/88 (15%)
Query: 20 PFQPPPAYEPPAPAPLPPP---SAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKK 76
P PPP PP PA P + P P E +T+ + AE
Sbjct: 974 PSTPPPKAAPPPPALTPDSQTVDSSCKTPEVSFLPEE-------ATEEAGVRGGAE---- 1022
Query: 77 QEELNRKAEELDRRERELQHAALGGTAT 104
+EE + EE + E E Q A T+T
Sbjct: 1023 EEEEEEEEEEEEEEEEEQQPATTTATST 1050
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 40.8 bits (94), Expect = 0.002
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 16 ELDNPFQPPPAYEPPA-PAPLPPPSAPSLQ--PSRKLSPTEPKNYGSYSTQASAAAATAE 72
EL+N P YE + P PL SLQ P+ + + + G T A ++++++
Sbjct: 54 ELENVLDPDSFYELKSQPLPLRSSLPISLQATPATPATLSASSSAGGSRTPAMSSSSSSR 113
Query: 73 LLKKQEELNRKAEELDRRERELQHAALGGTATRQNNWPPLPSFCPVQP 120
+L +Q+ + +A+E +RRER Q AA P PS P P
Sbjct: 114 VLLRQQLMRAQAQEQERRERREQAAA-----------APFPSPAPASP 150
>gi|56682953 epidermal growth factor receptor pathway substrate 8
[Homo sapiens]
Length = 822
Score = 40.4 bits (93), Expect = 0.002
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 14 PSELDNPFQPPPAYEPPAPAPLP---PPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAAT 70
P D P P P PP PAP+P PPS P+ P K+ P S S+ + +
Sbjct: 615 PRPADTPPAPSP---PPTPAPVPVPLPPSTPAPVPVSKV-PANITRQNSSSSDSGGSIVR 670
Query: 71 AELLKKQEELNRKAEELDRRERELQHAALGGTATRQNNW 109
KQ ++R+ +++ + EL H G + Q +
Sbjct: 671 DSQRHKQLPVDRRKSQMEEVQDELIHRLTIGRSAAQKKF 709
>gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [Homo
sapiens]
Length = 1584
Score = 40.4 bits (93), Expect = 0.002
Identities = 38/116 (32%), Positives = 47/116 (40%), Gaps = 25/116 (21%)
Query: 3 QSRDGGNPFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKL--SPTEPKNYGSY 60
Q GG P A P++ P PPP PP PLPPP P+L+P+ P EP +
Sbjct: 1397 QPPSGGPPEAPPAQ---PPPPPPPPPPPPQQPLPPP--PNLEPAPPSLGDPGEPAAHPGP 1451
Query: 61 STQASAAAATAELLKKQEELNRKAE--ELDRRE----------------RELQHAA 98
ST S L RK+ ELD + R+LQHAA
Sbjct: 1452 STGPSTKNENVATLSVSSLERRKSRYAELDFEKIMHTRKRHQDMFQDLNRKLQHAA 1507
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 40.4 bits (93), Expect = 0.002
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 15/68 (22%)
Query: 19 NPFQPPPAYEPPAP------------APLPP---PSAPSLQPSRKLSPTEPKNYGSYSTQ 63
+P QPPP PP P AP PP PS P QP ++ P +P + G
Sbjct: 161 HPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQPSHPGKMQEA 220
Query: 64 ASAAAATA 71
A+ AAA A
Sbjct: 221 AAVAAAAA 228
>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 40.0 bits (92), Expect = 0.003
Identities = 18/35 (51%), Positives = 19/35 (54%)
Query: 20 PFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEP 54
P PPP PP P PLPPP L+ L PTEP
Sbjct: 35 PPPPPPTPRPPPPPPLPPPGPRLLRACSLLLPTEP 69
>gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 40.0 bits (92), Expect = 0.003
Identities = 18/35 (51%), Positives = 19/35 (54%)
Query: 20 PFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEP 54
P PPP PP P PLPPP L+ L PTEP
Sbjct: 35 PPPPPPTPRPPPPPPLPPPGPRLLRACSLLLPTEP 69
>gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 40.0 bits (92), Expect = 0.003
Identities = 18/35 (51%), Positives = 19/35 (54%)
Query: 20 PFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEP 54
P PPP PP P PLPPP L+ L PTEP
Sbjct: 35 PPPPPPTPRPPPPPPLPPPGPRLLRACSLLLPTEP 69
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 40.0 bits (92), Expect = 0.003
Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 18/115 (15%)
Query: 17 LDNPFQPPPAYEPPAPAPLPPPSAPSLQPS-----RKLSPTEPKNYGSYSTQASAAAA-- 69
L +P P P PP P P PPP P + S K P + N ASA +A
Sbjct: 803 LPSPLPPTPPPPPPPPPPPPPPPLPVAKDSGPETLEKDLPRKEGNEKRIPKSASAPSAHL 862
Query: 70 --TAELLKKQEELNRKAEELDRRE---------RELQHAALGGTATRQNNWPPLP 113
+++L+ +++L + AE L RR L+ + Q PP P
Sbjct: 863 FDSSQLVSARKKLRKTAEGLQRRRVSSPMDEVLASLKRGSFHLKKVEQRTLPPFP 917
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 39.7 bits (91), Expect = 0.004
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Query: 1 MAQSRDGGNPFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSY 60
MA+S + + S+ D + PP PA PLP P RK P P + S
Sbjct: 250 MARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPR------GRKPKPERPPSSSSS 303
Query: 61 STQASAAAATAELLKKQEELNRKAEELDRRERE 93
+ + +E ++ E R+ E RRE+E
Sbjct: 304 DSDSDEVDRISEWKRRDEARRRELEARRRREQE 336
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 39.7 bits (91), Expect = 0.004
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Query: 1 MAQSRDGGNPFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSY 60
MA+S + + S+ D + PP PA PLP P RK P P + S
Sbjct: 250 MARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPR------GRKPKPERPPSSSSS 303
Query: 61 STQASAAAATAELLKKQEELNRKAEELDRRERE 93
+ + +E ++ E R+ E RRE+E
Sbjct: 304 DSDSDEVDRISEWKRRDEARRRELEARRRREQE 336
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 39.3 bits (90), Expect = 0.005
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 10 PFAEPSELDNPFQPPP------AYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQ 63
P PS + P PPP A +PP PAP PP P+ P S + P+N + T
Sbjct: 79 PSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTPAAPPPPS-SASPPQNASNNPTP 137
Query: 64 ASAA 67
A+AA
Sbjct: 138 ANAA 141
Score = 28.5 bits (62), Expect = 8.4
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 20 PFQPPPAYEPPAPA-PLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAA 68
P PPP +PP LPP S P+ PS P K Y T A A A
Sbjct: 291 PQSPPPFSKPPQGTYGLPPASYPASLPSCAPPPPPQKRY----TAAGAGA 336
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 39.3 bits (90), Expect = 0.005
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 10 PFAEPSELDNPFQPPP------AYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQ 63
P PS + P PPP A +PP PAP PP P+ P S + P+N + T
Sbjct: 79 PSQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQPPAPTPAAPPPPS-SASPPQNASNNPTP 137
Query: 64 ASAA 67
A+AA
Sbjct: 138 ANAA 141
Score = 28.5 bits (62), Expect = 8.4
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 20 PFQPPPAYEPPAPA-PLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAA 68
P PPP +PP LPP S P+ PS P K Y T A A A
Sbjct: 291 PQSPPPFSKPPQGTYGLPPASYPASLPSCAPPPPPQKRY----TAAGAGA 336
>gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo
sapiens]
Length = 538
Score = 39.3 bits (90), Expect = 0.005
Identities = 19/43 (44%), Positives = 22/43 (51%)
Query: 5 RDGGNPFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSR 47
R GG + P L PPP +E P P P PPP P+L P R
Sbjct: 208 RRGGGLTSAPPGLPPLASPPPFWELPRPPPPPPPPGPALLPRR 250
>gi|158534059 formin binding protein 4 [Homo sapiens]
Length = 1017
Score = 38.9 bits (89), Expect = 0.006
Identities = 30/119 (25%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 10 PFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAA 69
P +P + EPP P PPP P P+ K+ P E G +
Sbjct: 886 PSLQPVQARGAVPTATIIEPPPP---PPPPPPPPPPAPKMPPPEKTKKGRKDKAKKSKTK 942
Query: 70 TAELLKKQEELNRKAEELD---------------RRERELQHAALGGTATRQNNWPPLP 113
L+KK + + R+ +E D R E Q + G A R N+ LP
Sbjct: 943 MPSLVKKWQSIQRELDEEDNSSSSEEDRESTAQKRIEEWKQQQLVSGMAERNANFEALP 1001
Score = 35.0 bits (79), Expect = 0.089
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 17/91 (18%)
Query: 14 PSELDNPFQPPPAYEPPAPAPLPPPSA-----------------PSLQPSRKLSPTEPKN 56
P L+ P PPP E P P P PPP A P + + +P +P
Sbjct: 706 PLPLEMPPPPPPPPESPPPPPPPPPPAEDGEIQEVEMEDEGSEEPPAPGTEEDTPLKPSA 765
Query: 57 YGSYSTQASAAAATAELLKKQEELNRKAEEL 87
+ T S+ +T + + RKA E+
Sbjct: 766 QTTVVTSQSSVDSTISSSSSTKGIKRKATEI 796
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 38.9 bits (89), Expect = 0.006
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 9 NPFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPT-EPKNYGSYSTQASAA 67
N + PS L P PPP PP P P PPP P P + L P P G+ + +A
Sbjct: 167 NMHSVPSYLTQPPPPPP---PPPPLPPPPPPQPPPPPPQSLGPPGRPNPGGNGVVEVYSA 223
Query: 68 AA 69
AA
Sbjct: 224 AA 225
>gi|19923391 homeobox D3 [Homo sapiens]
Length = 432
Score = 38.5 bits (88), Expect = 0.008
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 7 GGNPFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASA 66
GG ++P L++ QPP +PP P P PPS+P+ P + +PK G + +S+
Sbjct: 100 GGGGGSQPPGLNSEQQPP---QPPPPPPTLPPSSPT-NPGGGVPAKKPK--GGPNASSSS 153
Query: 67 AAATAELLKKQEELNRKAEELDRRERELQHAALGGTATRQNNWPPLPSFCPVQPCFFQDI 126
A + ++ +E R+ + +++ + ++ PP P+ V+ +
Sbjct: 154 ATISKQIFPWMKE--------SRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQ 205
Query: 127 SMEIPQEF 134
+E+ +EF
Sbjct: 206 LVELEKEF 213
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 38.1 bits (87), Expect = 0.011
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 2 AQSRDGGNPFAEPSELDNPFQPPPAYEPPAPA----PLPPPSAPSLQPSRKLSP 51
A R G P P P PPP PP P+ P PPP P+L P+ L+P
Sbjct: 374 ATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAP 427
Score = 30.8 bits (68), Expect = 1.7
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 7 GGNPFAEPSEL--DNPFQPPP--AYEPPAPAPLPPPSAPSLQPSRKLSPTEP 54
GG P P P PPP A PP P P PPP P PS P P
Sbjct: 365 GGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPP---PSSGNGPAPP 413
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 38.1 bits (87), Expect = 0.011
Identities = 30/108 (27%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Query: 17 LDNPFQPPPAYEPPAPAPLPPP---------SAPSLQPSRKLSPTEPKNYGSYSTQASAA 67
L P PPPA P P P PPP S P P P P + +
Sbjct: 69 LHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGP-GPAGGAPTPALVAGS 127
Query: 68 AATAELLKKQEELNRKAEELDRRERELQHAALGGTATRQNNWPPLPSF 115
+A A LN + +EL RR + L A +W P F
Sbjct: 128 SAAAPFPHGDSALNEQEKELQRRLKRLYPAVDEQETPLPRSWSPKDKF 175
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 38.1 bits (87), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 9 NPFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKL 49
N + P + P PPP PP P P PPP PS P +L
Sbjct: 1984 NTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSAPPQVQL 2024
Score = 37.0 bits (84), Expect = 0.023
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 10 PFAEPSELDNPFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSP 51
P P+ + P Q PP PP P P PPP P P P
Sbjct: 1979 PVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSAPP 2020
Score = 30.8 bits (68), Expect = 1.7
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 20 PFQPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEE 79
P +P PP P P PPP PS LS + + S + + +K++E
Sbjct: 3109 PTKPLLQTPPPPPPPPPPP------PSSSLSGQQTEQQNKESEKKQTKPNKVKKIKEEEL 3162
Query: 80 LNRKAEELDRRERELQHA 97
K E+ ++E ++ A
Sbjct: 3163 EATKPEKHPKKEEKISSA 3180
Score = 28.5 bits (62), Expect = 8.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 14 PSELDNPFQPPPAYEPPAPAPLPP-PSAPSLQPSRKLSPT 52
P +P PPP PP P PLPP P PS K+ T
Sbjct: 1949 PISPSSPETPPP---PPPPPPLPPAPPQPSSMGPVKIPNT 1985
>gi|169215927 PREDICTED: hypothetical protein [Homo sapiens]
Length = 357
Score = 37.7 bits (86), Expect = 0.014
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 24 PPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNR- 82
PP PA LPP P+ SR+L P ++ GS ST A AAT ELL + ++ NR
Sbjct: 11 PPIVIQPARRSLPPIVTPA---SRRLGPRGGRHLGSVST---AMAATQELLLQLQKDNRD 64
Query: 83 ---KAEELDRRERELQ 95
+ +EL++ R L+
Sbjct: 65 GRQRKQELEKLMRGLE 80
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,338,544
Number of Sequences: 37866
Number of extensions: 716431
Number of successful extensions: 17728
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 524
Number of HSP's that attempted gapping in prelim test: 10634
Number of HSP's gapped (non-prelim): 4971
length of query: 321
length of database: 18,247,518
effective HSP length: 102
effective length of query: 219
effective length of database: 14,385,186
effective search space: 3150355734
effective search space used: 3150355734
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.