Guide to the Human Genome
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Search of human proteins with 164419746

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|164419746 nuclear factor of activated T-cells 5 isoform d
[Homo sapiens]
         (1548 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|164419746 nuclear factor of activated T-cells 5 isoform d [Ho...  3043   0.0  
gi|164419744 nuclear factor of activated T-cells 5 isoform b [Ho...  3038   0.0  
gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo...  2991   0.0  
gi|27886520 nuclear factor of activated T-cells 5 isoform a [Hom...  2859   0.0  
gi|27886524 nuclear factor of activated T-cells 5 isoform a [Hom...  2859   0.0  
gi|27886561 nuclear factor of activated T-cells, cytoplasmic, ca...   223   1e-57
gi|27886559 nuclear factor of activated T-cells, cytoplasmic, ca...   223   1e-57
gi|27886555 nuclear factor of activated T-cells, cytoplasmic, ca...   223   1e-57
gi|4758804 nuclear factor of activated T-cells, cytoplasmic, cal...   223   1e-57
gi|27886539 nuclear factor of activated T-cells, cytoplasmic, ca...   221   4e-57
gi|27886541 nuclear factor of activated T-cells, cytoplasmic, ca...   221   4e-57
gi|209862843 nuclear factor of activated T-cells, cytoplasmic, c...   221   4e-57
gi|27502386 nuclear factor of activated T-cells, cytosolic compo...   218   3e-56
gi|19923350 nuclear factor of activated T-cells, cytosolic compo...   218   3e-56
gi|27502393 nuclear factor of activated T-cells, cytosolic compo...   218   3e-56
gi|27502391 nuclear factor of activated T-cells, cytosolic compo...   218   3e-56
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c...   196   1e-49
gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca...   196   1e-49
gi|27502388 nuclear factor of activated T-cells, cytosolic compo...   171   5e-42
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    93   2e-18
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]       86   4e-16
gi|33286444 mastermind-like 2 [Homo sapiens]                           84   1e-15
gi|93141033 PAX interacting protein 1 [Homo sapiens]                   83   2e-15
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]              83   2e-15
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]       80   2e-14
gi|221139761 zinc finger protein 853 [Homo sapiens]                    79   4e-14
gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens]    76   2e-13
gi|62953127 polyhomeotic 1-like [Homo sapiens]                         76   2e-13
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     76   3e-13
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]     76   3e-13

>gi|164419746 nuclear factor of activated T-cells 5 isoform d [Homo
            sapiens]
          Length = 1548

 Score = 3043 bits (7889), Expect = 0.0
 Identities = 1548/1548 (100%), Positives = 1548/1548 (100%)

Query: 1    MPSDFISLLSADLDLESPKSLYSRDSLKLHPSQNFHRAGLLEESVYDLLPKELQLPPSRE 60
            MPSDFISLLSADLDLESPKSLYSRDSLKLHPSQNFHRAGLLEESVYDLLPKELQLPPSRE
Sbjct: 1    MPSDFISLLSADLDLESPKSLYSRDSLKLHPSQNFHRAGLLEESVYDLLPKELQLPPSRE 60

Query: 61   TSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKA 120
            TSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKA
Sbjct: 61   TSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKA 120

Query: 121  MQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDNSRMSCQDE 180
            MQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDNSRMSCQDE
Sbjct: 121  MQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDNSRMSCQDE 180

Query: 181  GCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGVKRRDCEESNM 240
            GCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGVKRRDCEESNM
Sbjct: 181  GCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGVKRRDCEESNM 240

Query: 241  DIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLENQKGTGVKKSPMLCGQYPVKSEGKEL 300
            DIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLENQKGTGVKKSPMLCGQYPVKSEGKEL
Sbjct: 241  DIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLENQKGTGVKKSPMLCGQYPVKSEGKEL 300

Query: 301  KIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHG 360
            KIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHG
Sbjct: 301  KIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHG 360

Query: 361  FYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIA 420
            FYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIA
Sbjct: 361  FYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIA 420

Query: 421  GSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEE 480
            GSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEE
Sbjct: 421  GSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEE 480

Query: 481  VFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPPYHDQHITLPVSV 540
            VFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPPYHDQHITLPVSV
Sbjct: 481  VFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPPYHDQHITLPVSV 540

Query: 541  GIYVVTNAGRSHDVQPFTYTPDPAAGALNVNVKKEISSPARPCSFEEAMKAMKTTGCNLD 600
            GIYVVTNAGRSHDVQPFTYTPDPAAGALNVNVKKEISSPARPCSFEEAMKAMKTTGCNLD
Sbjct: 541  GIYVVTNAGRSHDVQPFTYTPDPAAGALNVNVKKEISSPARPCSFEEAMKAMKTTGCNLD 600

Query: 601  KVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSVGSTQQTLENISNIAG 660
            KVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSVGSTQQTLENISNIAG
Sbjct: 601  KVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSVGSTQQTLENISNIAG 660

Query: 661  NGSFSSPSSSHLPSENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSDA 720
            NGSFSSPSSSHLPSENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSDA
Sbjct: 661  NGSFSSPSSSHLPSENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSDA 720

Query: 721  LLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIFP 780
            LLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIFP
Sbjct: 721  LLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIFP 780

Query: 781  SPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQ 840
            SPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQ
Sbjct: 781  SPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQ 840

Query: 841  EQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQQ 900
            EQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQQ
Sbjct: 841  EQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQQ 900

Query: 901  QQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSALS 960
            QQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSALS
Sbjct: 901  QQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSALS 960

Query: 961  TNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNS 1020
            TNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNS
Sbjct: 961  TNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNS 1020

Query: 1021 VFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQQ 1080
            VFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQQ
Sbjct: 1021 VFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQQ 1080

Query: 1081 SSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTI 1140
            SSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTI
Sbjct: 1081 SSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTI 1140

Query: 1141 AVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQ 1200
            AVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQ
Sbjct: 1141 AVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQ 1200

Query: 1201 QQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQS 1260
            QQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQS
Sbjct: 1201 QQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQS 1260

Query: 1261 NSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQ 1320
            NSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQ
Sbjct: 1261 NSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQ 1320

Query: 1321 QNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQG 1380
            QNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQG
Sbjct: 1321 QNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQG 1380

Query: 1381 SPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFH 1440
            SPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFH
Sbjct: 1381 SPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFH 1440

Query: 1441 NTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNEG 1500
            NTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNEG
Sbjct: 1441 NTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNEG 1500

Query: 1501 QPPVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF 1548
            QPPVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF
Sbjct: 1501 QPPVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF 1548


>gi|164419744 nuclear factor of activated T-cells 5 isoform b [Homo
            sapiens]
          Length = 1549

 Score = 3038 bits (7877), Expect = 0.0
 Identities = 1548/1549 (99%), Positives = 1548/1549 (99%), Gaps = 1/1549 (0%)

Query: 1    MPSDFISLLSADLDLESPKSLYSRDSLKLHPSQNFHRAGLLEESVYDLLPKELQLPPSRE 60
            MPSDFISLLSADLDLESPKSLYSRDSLKLHPSQNFHRAGLLEESVYDLLPKELQLPPSRE
Sbjct: 1    MPSDFISLLSADLDLESPKSLYSRDSLKLHPSQNFHRAGLLEESVYDLLPKELQLPPSRE 60

Query: 61   TSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKA 120
            TSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKA
Sbjct: 61   TSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKA 120

Query: 121  MQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDNSRMSCQDE 180
            MQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDNSRMSCQDE
Sbjct: 121  MQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDNSRMSCQDE 180

Query: 181  GCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGVKRRDCEESNM 240
            GCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGVKRRDCEESNM
Sbjct: 181  GCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGVKRRDCEESNM 240

Query: 241  DIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLENQKGTGVKKSPMLCGQYPVKSEGKEL 300
            DIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLENQKGTGVKKSPMLCGQYPVKSEGKEL
Sbjct: 241  DIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLENQKGTGVKKSPMLCGQYPVKSEGKEL 300

Query: 301  KIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHG 360
            KIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHG
Sbjct: 301  KIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHG 360

Query: 361  FYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIA 420
            FYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIA
Sbjct: 361  FYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIA 420

Query: 421  GSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEE 480
            GSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEE
Sbjct: 421  GSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEE 480

Query: 481  VFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPPYHDQHITLPVSV 540
            VFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPPYHDQHITLPVSV
Sbjct: 481  VFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPPYHDQHITLPVSV 540

Query: 541  GIYVVTNAGRSHDVQPFTYTPDPAA-GALNVNVKKEISSPARPCSFEEAMKAMKTTGCNL 599
            GIYVVTNAGRSHDVQPFTYTPDPAA GALNVNVKKEISSPARPCSFEEAMKAMKTTGCNL
Sbjct: 541  GIYVVTNAGRSHDVQPFTYTPDPAAAGALNVNVKKEISSPARPCSFEEAMKAMKTTGCNL 600

Query: 600  DKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSVGSTQQTLENISNIA 659
            DKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSVGSTQQTLENISNIA
Sbjct: 601  DKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSVGSTQQTLENISNIA 660

Query: 660  GNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSD 719
            GNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSD
Sbjct: 661  GNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSD 720

Query: 720  ALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIF 779
            ALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIF
Sbjct: 721  ALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIF 780

Query: 780  PSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENV 839
            PSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENV
Sbjct: 781  PSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENV 840

Query: 840  QEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQ 899
            QEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQ
Sbjct: 841  QEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQ 900

Query: 900  QQQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSAL 959
            QQQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSAL
Sbjct: 901  QQQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSAL 960

Query: 960  STNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQN 1019
            STNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQN
Sbjct: 961  STNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQN 1020

Query: 1020 SVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQ 1079
            SVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQ
Sbjct: 1021 SVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQ 1080

Query: 1080 QSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQST 1139
            QSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQST
Sbjct: 1081 QSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQST 1140

Query: 1140 IAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAF 1199
            IAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAF
Sbjct: 1141 IAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAF 1200

Query: 1200 QQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQ 1259
            QQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQ
Sbjct: 1201 QQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQ 1260

Query: 1260 SNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQE 1319
            SNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQE
Sbjct: 1261 SNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQE 1320

Query: 1320 QQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQ 1379
            QQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQ
Sbjct: 1321 QQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQ 1380

Query: 1380 GSPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLF 1439
            GSPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLF
Sbjct: 1381 GSPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLF 1440

Query: 1440 HNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNE 1499
            HNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNE
Sbjct: 1441 HNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNE 1500

Query: 1500 GQPPVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF 1548
            GQPPVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF
Sbjct: 1501 GQPPVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF 1549


>gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo
            sapiens]
          Length = 1531

 Score = 2991 bits (7753), Expect = 0.0
 Identities = 1530/1549 (98%), Positives = 1530/1549 (98%), Gaps = 19/1549 (1%)

Query: 1    MPSDFISLLSADLDLESPKSLYSRDSLKLHPSQNFHRAGLLEESVYDLLPKELQLPPSRE 60
            MPSDFISLLSADLDLESPKSLYSR                  ESVYDLLPKELQLPPSRE
Sbjct: 1    MPSDFISLLSADLDLESPKSLYSR------------------ESVYDLLPKELQLPPSRE 42

Query: 61   TSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKA 120
            TSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKA
Sbjct: 43   TSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKA 102

Query: 121  MQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDNSRMSCQDE 180
            MQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDNSRMSCQDE
Sbjct: 103  MQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDNSRMSCQDE 162

Query: 181  GCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGVKRRDCEESNM 240
            GCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGVKRRDCEESNM
Sbjct: 163  GCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGVKRRDCEESNM 222

Query: 241  DIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLENQKGTGVKKSPMLCGQYPVKSEGKEL 300
            DIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLENQKGTGVKKSPMLCGQYPVKSEGKEL
Sbjct: 223  DIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLENQKGTGVKKSPMLCGQYPVKSEGKEL 282

Query: 301  KIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHG 360
            KIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHG
Sbjct: 283  KIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHG 342

Query: 361  FYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIA 420
            FYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIA
Sbjct: 343  FYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIA 402

Query: 421  GSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEE 480
            GSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEE
Sbjct: 403  GSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEE 462

Query: 481  VFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPPYHDQHITLPVSV 540
            VFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPPYHDQHITLPVSV
Sbjct: 463  VFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPPYHDQHITLPVSV 522

Query: 541  GIYVVTNAGRSHDVQPFTYTPDPAA-GALNVNVKKEISSPARPCSFEEAMKAMKTTGCNL 599
            GIYVVTNAGRSHDVQPFTYTPDPAA GALNVNVKKEISSPARPCSFEEAMKAMKTTGCNL
Sbjct: 523  GIYVVTNAGRSHDVQPFTYTPDPAAAGALNVNVKKEISSPARPCSFEEAMKAMKTTGCNL 582

Query: 600  DKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSVGSTQQTLENISNIA 659
            DKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSVGSTQQTLENISNIA
Sbjct: 583  DKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSVGSTQQTLENISNIA 642

Query: 660  GNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSD 719
            GNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSD
Sbjct: 643  GNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSD 702

Query: 720  ALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIF 779
            ALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIF
Sbjct: 703  ALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIF 762

Query: 780  PSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENV 839
            PSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENV
Sbjct: 763  PSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENV 822

Query: 840  QEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQ 899
            QEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQ
Sbjct: 823  QEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQ 882

Query: 900  QQQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSAL 959
            QQQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSAL
Sbjct: 883  QQQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSAL 942

Query: 960  STNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQN 1019
            STNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQN
Sbjct: 943  STNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQN 1002

Query: 1020 SVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQ 1079
            SVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQ
Sbjct: 1003 SVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQ 1062

Query: 1080 QSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQST 1139
            QSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQST
Sbjct: 1063 QSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQST 1122

Query: 1140 IAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAF 1199
            IAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAF
Sbjct: 1123 IAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAF 1182

Query: 1200 QQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQ 1259
            QQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQ
Sbjct: 1183 QQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQ 1242

Query: 1260 SNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQE 1319
            SNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQE
Sbjct: 1243 SNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQE 1302

Query: 1320 QQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQ 1379
            QQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQ
Sbjct: 1303 QQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQ 1362

Query: 1380 GSPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLF 1439
            GSPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLF
Sbjct: 1363 GSPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLF 1422

Query: 1440 HNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNE 1499
            HNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNE
Sbjct: 1423 HNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNE 1482

Query: 1500 GQPPVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF 1548
            GQPPVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF
Sbjct: 1483 GQPPVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF 1531


>gi|27886520 nuclear factor of activated T-cells 5 isoform a [Homo
            sapiens]
          Length = 1455

 Score = 2859 bits (7412), Expect = 0.0
 Identities = 1454/1455 (99%), Positives = 1454/1455 (99%), Gaps = 1/1455 (0%)

Query: 95   MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTP 154
            MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTP
Sbjct: 1    MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTP 60

Query: 155  KRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTE 214
            KRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTE
Sbjct: 61   KRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTE 120

Query: 215  VPRKSRKRNPKQRPGVKRRDCEESNMDIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLE 274
            VPRKSRKRNPKQRPGVKRRDCEESNMDIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLE
Sbjct: 121  VPRKSRKRNPKQRPGVKRRDCEESNMDIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLE 180

Query: 275  NQKGTGVKKSPMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTV 334
            NQKGTGVKKSPMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTV
Sbjct: 181  NQKGTGVKKSPMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTV 240

Query: 335  KLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSN 394
            KLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSN
Sbjct: 241  KLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSN 300

Query: 395  NMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPI 454
            NMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPI
Sbjct: 301  NMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPI 360

Query: 455  LCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDM 514
            LCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDM
Sbjct: 361  LCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDM 420

Query: 515  ELFHQNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTPDPAA-GALNVNVK 573
            ELFHQNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTPDPAA GALNVNVK
Sbjct: 421  ELFHQNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTPDPAAAGALNVNVK 480

Query: 574  KEISSPARPCSFEEAMKAMKTTGCNLDKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEK 633
            KEISSPARPCSFEEAMKAMKTTGCNLDKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEK
Sbjct: 481  KEISSPARPCSFEEAMKAMKTTGCNLDKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEK 540

Query: 634  RSSTIFKTTKSVGSTQQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLT 693
            RSSTIFKTTKSVGSTQQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLT
Sbjct: 541  RSSTIFKTTKSVGSTQQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLT 600

Query: 694  TIQTQDISQPGTFPAVSASSQLPNSDALLQQATQFQTRETQSREILQSDGTVVNLSQLTE 753
            TIQTQDISQPGTFPAVSASSQLPNSDALLQQATQFQTRETQSREILQSDGTVVNLSQLTE
Sbjct: 601  TIQTQDISQPGTFPAVSASSQLPNSDALLQQATQFQTRETQSREILQSDGTVVNLSQLTE 660

Query: 754  ASQQQQQSPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVD 813
            ASQQQQQSPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVD
Sbjct: 661  ASQQQQQSPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVD 720

Query: 814  LVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTR 873
            LVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTR
Sbjct: 721  LVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTR 780

Query: 874  PDNLLPGRAESVHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQAAAQIQSELF 933
            PDNLLPGRAESVHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQAAAQIQSELF
Sbjct: 781  PDNLLPGRAESVHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQAAAQIQSELF 840

Query: 934  PSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQVAT 993
            PSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQVAT
Sbjct: 841  PSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQVAT 900

Query: 994  PGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNS 1053
            PGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNS
Sbjct: 901  PGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNS 960

Query: 1054 GTQQQGNGLFQQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSP 1113
            GTQQQGNGLFQQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSP
Sbjct: 961  GTQQQGNGLFQQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSP 1020

Query: 1114 NPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVA 1173
            NPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVA
Sbjct: 1021 NPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVA 1080

Query: 1174 QEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALG 1233
            QEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALG
Sbjct: 1081 QEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALG 1140

Query: 1234 SLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTM 1293
            SLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTM
Sbjct: 1141 SLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTM 1200

Query: 1294 ATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSL 1353
            ATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSL
Sbjct: 1201 ATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSL 1260

Query: 1354 QNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQDMQQS 1413
            QNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQDMQQS
Sbjct: 1261 QNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQDMQQS 1320

Query: 1414 PLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCS 1473
            PLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCS
Sbjct: 1321 PLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCS 1380

Query: 1474 QLLTSGPATLPDQLMAISQPGQPQNEGQPPVTTLLSQQMPENSPLASSINTNQNIEKIDL 1533
            QLLTSGPATLPDQLMAISQPGQPQNEGQPPVTTLLSQQMPENSPLASSINTNQNIEKIDL
Sbjct: 1381 QLLTSGPATLPDQLMAISQPGQPQNEGQPPVTTLLSQQMPENSPLASSINTNQNIEKIDL 1440

Query: 1534 LVSLQNQGNNLTGSF 1548
            LVSLQNQGNNLTGSF
Sbjct: 1441 LVSLQNQGNNLTGSF 1455


>gi|27886524 nuclear factor of activated T-cells 5 isoform a [Homo
            sapiens]
          Length = 1455

 Score = 2859 bits (7412), Expect = 0.0
 Identities = 1454/1455 (99%), Positives = 1454/1455 (99%), Gaps = 1/1455 (0%)

Query: 95   MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTP 154
            MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTP
Sbjct: 1    MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTP 60

Query: 155  KRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTE 214
            KRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTE
Sbjct: 61   KRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTE 120

Query: 215  VPRKSRKRNPKQRPGVKRRDCEESNMDIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLE 274
            VPRKSRKRNPKQRPGVKRRDCEESNMDIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLE
Sbjct: 121  VPRKSRKRNPKQRPGVKRRDCEESNMDIFDADSAKAPHYVLSQLTTDNKGNSKAGNGTLE 180

Query: 275  NQKGTGVKKSPMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTV 334
            NQKGTGVKKSPMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTV
Sbjct: 181  NQKGTGVKKSPMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTV 240

Query: 335  KLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSN 394
            KLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSN
Sbjct: 241  KLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSN 300

Query: 395  NMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPI 454
            NMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPI
Sbjct: 301  NMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPI 360

Query: 455  LCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDM 514
            LCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDM
Sbjct: 361  LCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDM 420

Query: 515  ELFHQNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTPDPAA-GALNVNVK 573
            ELFHQNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTPDPAA GALNVNVK
Sbjct: 421  ELFHQNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTPDPAAAGALNVNVK 480

Query: 574  KEISSPARPCSFEEAMKAMKTTGCNLDKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEK 633
            KEISSPARPCSFEEAMKAMKTTGCNLDKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEK
Sbjct: 481  KEISSPARPCSFEEAMKAMKTTGCNLDKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEK 540

Query: 634  RSSTIFKTTKSVGSTQQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLT 693
            RSSTIFKTTKSVGSTQQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLT
Sbjct: 541  RSSTIFKTTKSVGSTQQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLT 600

Query: 694  TIQTQDISQPGTFPAVSASSQLPNSDALLQQATQFQTRETQSREILQSDGTVVNLSQLTE 753
            TIQTQDISQPGTFPAVSASSQLPNSDALLQQATQFQTRETQSREILQSDGTVVNLSQLTE
Sbjct: 601  TIQTQDISQPGTFPAVSASSQLPNSDALLQQATQFQTRETQSREILQSDGTVVNLSQLTE 660

Query: 754  ASQQQQQSPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVD 813
            ASQQQQQSPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVD
Sbjct: 661  ASQQQQQSPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVD 720

Query: 814  LVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTR 873
            LVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTR
Sbjct: 721  LVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTR 780

Query: 874  PDNLLPGRAESVHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQAAAQIQSELF 933
            PDNLLPGRAESVHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQAAAQIQSELF
Sbjct: 781  PDNLLPGRAESVHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQAAAQIQSELF 840

Query: 934  PSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQVAT 993
            PSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQVAT
Sbjct: 841  PSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQVAT 900

Query: 994  PGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNS 1053
            PGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNS
Sbjct: 901  PGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNS 960

Query: 1054 GTQQQGNGLFQQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSP 1113
            GTQQQGNGLFQQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSP
Sbjct: 961  GTQQQGNGLFQQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSP 1020

Query: 1114 NPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVA 1173
            NPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVA
Sbjct: 1021 NPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVA 1080

Query: 1174 QEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALG 1233
            QEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALG
Sbjct: 1081 QEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALG 1140

Query: 1234 SLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTM 1293
            SLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTM
Sbjct: 1141 SLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTM 1200

Query: 1294 ATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSL 1353
            ATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSL
Sbjct: 1201 ATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSL 1260

Query: 1354 QNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQDMQQS 1413
            QNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQDMQQS
Sbjct: 1261 QNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQDMQQS 1320

Query: 1414 PLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCS 1473
            PLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCS
Sbjct: 1321 PLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCS 1380

Query: 1474 QLLTSGPATLPDQLMAISQPGQPQNEGQPPVTTLLSQQMPENSPLASSINTNQNIEKIDL 1533
            QLLTSGPATLPDQLMAISQPGQPQNEGQPPVTTLLSQQMPENSPLASSINTNQNIEKIDL
Sbjct: 1381 QLLTSGPATLPDQLMAISQPGQPQNEGQPPVTTLLSQQMPENSPLASSINTNQNIEKIDL 1440

Query: 1534 LVSLQNQGNNLTGSF 1548
            LVSLQNQGNNLTGSF
Sbjct: 1441 LVSLQNQGNNLTGSF 1455


>gi|27886561 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 3 isoform 1 [Homo sapiens]
          Length = 1075

 Score =  223 bits (568), Expect = 1e-57
 Identities = 150/394 (38%), Positives = 216/394 (54%), Gaps = 32/394 (8%)

Query: 299 ELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNE-PVVLQVFVGNDSGR-V 356
           ELKI VQP+T HRA Y TEGSRG+VK  T  G P VKL G+NE P+ LQ+F+G    R +
Sbjct: 432 ELKIEVQPKTHHRAHYETEGSRGAVKASTG-GHPVVKLLGYNEKPINLQMFIGTADDRYL 490

Query: 357 KPHGFYQACRVTGRNT-TPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEA 415
           +PH FYQ  R+TG+   T  +E+ I  T V+E+ L P NNM+ ++DC GILKLRN+D+E 
Sbjct: 491 RPHAFYQVHRITGKTVATASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIEL 550

Query: 416 RIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG--VPEILKKSLHSC 473
           R G     +K+TR RLVFRV+I +  G  L+LQ  S P+ C+Q +   +P I K S++SC
Sbjct: 551 RKGETDIGRKNTRVRLVFRVHIPQPSGKVLSLQIASIPVECSQRSAQELPHIEKYSINSC 610

Query: 474 SVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFHQNHLIVKVPPYHDQ 532
           SV G  E+ + G NFL  +K+IF E   D    W+ E +I  E     H++++VPPYH+ 
Sbjct: 611 SVNGGHEMVVTGSNFLPESKIIFLEKGQDGRPQWEVEGKIIREKCQGAHIVLEVPPYHNP 670

Query: 533 HITLPVSVGIYVVTNAGRSHDVQPFTYTPDPAAGALNVNVKKEI---SSPARPCSF-EEA 588
            +T  V V  Y+     +    Q FTYTP      +    ++EI   S P+ P     + 
Sbjct: 671 AVTAAVQVHFYLCNGKRKKSQSQRFTYTP----VLMKQEHREEIDLSSVPSLPVPHPAQT 726

Query: 589 MKAMKTTGCNLDKVNIIPNALM--TPLIPSSMIKSEDVTPMEVTAEKRSS---------- 636
            +    +GC+ D V     +L+   P   +SM+ S  +  ++   E  S           
Sbjct: 727 QRPSSDSGCSHDSVLSGQRSLICSIPQTYASMVTSSHLPQLQCRDESVSKEQHMIPSPIV 786

Query: 637 -TIFKTTKS--VGSTQQTLENISNIAGNGSFSSP 667
              F+ T +  VGS+ Q ++  +N+  NG    P
Sbjct: 787 HQPFQVTPTPPVGSSYQPMQ--TNVVYNGPTCLP 818



 Score = 43.1 bits (100), Expect = 0.002
 Identities = 85/407 (20%), Positives = 148/407 (36%), Gaps = 68/407 (16%)

Query: 1143 LQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQ 1202
            ++G  + +  Q  +I L   P +N       Q  F+         QS   +      +Q+
Sbjct: 646  VEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYLCNGKRKKSQSQRFTYTPVLMKQE 705

Query: 1203 -------APISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSI 1255
                   + +  +  P  +Q Q      G     V  G          Q+  +     + 
Sbjct: 706  HREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSVLSG----------QRSLICSIPQTY 755

Query: 1256 VAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMAT--MASPKQP-PPNMIFN-PN 1311
             +M ++S   + Q + +   ++Q      I+        T  + S  QP   N+++N P 
Sbjct: 756  ASMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPVGSSYQPMQTNVVYNGPT 815

Query: 1312 QNPM--ANQEQQNQSIFHQQSNMAPM-NQEQQPMQ---FQSQS----------------T 1349
              P+  A+ ++ +  +F Q + ++ + N   QP+    F S +                T
Sbjct: 816  CLPINAASSQEFDSVLFQQDATLSGLVNLGCQPLSSIPFHSSNSGSTGHLLAHTPHSVHT 875

Query: 1350 VSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQD 1409
            +  LQ+ G   S + Q  L  SSP    + G PSSQ Q +T   S +  +   +      
Sbjct: 876  LPHLQSMGYHCSNTGQRSL--SSPVADQITGQPSSQLQPITYGPSHSGSATTASPAASHP 933

Query: 1410 MQQSPLYSPQNNMPGIQ---------GATSSPQPQATLFHNTAGGTMNQLQNSPGSSQQT 1460
            +  SPL  P +  P +Q         G  SSP P AT  H+    T  Q     G S  +
Sbjct: 934  LASSPLSGPPS--PQLQPMPYQSPSSGTASSPSP-ATRMHSGQHSTQAQSTGQGGLSAPS 990

Query: 1461 SGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNEGQPPVTTL 1507
            S +        C  L    PA+ P     +S   +P++  +P   T+
Sbjct: 991  SLI--------CHSL--CDPASFPPDGATVSIKPEPEDR-EPNFATI 1026


>gi|27886559 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 3 isoform 4 [Homo sapiens]
          Length = 1045

 Score =  223 bits (568), Expect = 1e-57
 Identities = 150/394 (38%), Positives = 216/394 (54%), Gaps = 32/394 (8%)

Query: 299 ELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNE-PVVLQVFVGNDSGR-V 356
           ELKI VQP+T HRA Y TEGSRG+VK  T  G P VKL G+NE P+ LQ+F+G    R +
Sbjct: 432 ELKIEVQPKTHHRAHYETEGSRGAVKASTG-GHPVVKLLGYNEKPINLQMFIGTADDRYL 490

Query: 357 KPHGFYQACRVTGRNT-TPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEA 415
           +PH FYQ  R+TG+   T  +E+ I  T V+E+ L P NNM+ ++DC GILKLRN+D+E 
Sbjct: 491 RPHAFYQVHRITGKTVATASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIEL 550

Query: 416 RIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG--VPEILKKSLHSC 473
           R G     +K+TR RLVFRV+I +  G  L+LQ  S P+ C+Q +   +P I K S++SC
Sbjct: 551 RKGETDIGRKNTRVRLVFRVHIPQPSGKVLSLQIASIPVECSQRSAQELPHIEKYSINSC 610

Query: 474 SVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFHQNHLIVKVPPYHDQ 532
           SV G  E+ + G NFL  +K+IF E   D    W+ E +I  E     H++++VPPYH+ 
Sbjct: 611 SVNGGHEMVVTGSNFLPESKIIFLEKGQDGRPQWEVEGKIIREKCQGAHIVLEVPPYHNP 670

Query: 533 HITLPVSVGIYVVTNAGRSHDVQPFTYTPDPAAGALNVNVKKEI---SSPARPCSF-EEA 588
            +T  V V  Y+     +    Q FTYTP      +    ++EI   S P+ P     + 
Sbjct: 671 AVTAAVQVHFYLCNGKRKKSQSQRFTYTP----VLMKQEHREEIDLSSVPSLPVPHPAQT 726

Query: 589 MKAMKTTGCNLDKVNIIPNALM--TPLIPSSMIKSEDVTPMEVTAEKRSS---------- 636
            +    +GC+ D V     +L+   P   +SM+ S  +  ++   E  S           
Sbjct: 727 QRPSSDSGCSHDSVLSGQRSLICSIPQTYASMVTSSHLPQLQCRDESVSKEQHMIPSPIV 786

Query: 637 -TIFKTTKS--VGSTQQTLENISNIAGNGSFSSP 667
              F+ T +  VGS+ Q ++  +N+  NG    P
Sbjct: 787 HQPFQVTPTPPVGSSYQPMQ--TNVVYNGPTCLP 818



 Score = 43.1 bits (100), Expect = 0.002
 Identities = 85/407 (20%), Positives = 148/407 (36%), Gaps = 68/407 (16%)

Query: 1143 LQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQ 1202
            ++G  + +  Q  +I L   P +N       Q  F+         QS   +      +Q+
Sbjct: 646  VEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYLCNGKRKKSQSQRFTYTPVLMKQE 705

Query: 1203 -------APISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSI 1255
                   + +  +  P  +Q Q      G     V  G          Q+  +     + 
Sbjct: 706  HREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSVLSG----------QRSLICSIPQTY 755

Query: 1256 VAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMAT--MASPKQP-PPNMIFN-PN 1311
             +M ++S   + Q + +   ++Q      I+        T  + S  QP   N+++N P 
Sbjct: 756  ASMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPVGSSYQPMQTNVVYNGPT 815

Query: 1312 QNPM--ANQEQQNQSIFHQQSNMAPM-NQEQQPMQ---FQSQS----------------T 1349
              P+  A+ ++ +  +F Q + ++ + N   QP+    F S +                T
Sbjct: 816  CLPINAASSQEFDSVLFQQDATLSGLVNLGCQPLSSIPFHSSNSGSTGHLLAHTPHSVHT 875

Query: 1350 VSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQD 1409
            +  LQ+ G   S + Q  L  SSP    + G PSSQ Q +T   S +  +   +      
Sbjct: 876  LPHLQSMGYHCSNTGQRSL--SSPVADQITGQPSSQLQPITYGPSHSGSATTASPAASHP 933

Query: 1410 MQQSPLYSPQNNMPGIQ---------GATSSPQPQATLFHNTAGGTMNQLQNSPGSSQQT 1460
            +  SPL  P +  P +Q         G  SSP P AT  H+    T  Q     G S  +
Sbjct: 934  LASSPLSGPPS--PQLQPMPYQSPSSGTASSPSP-ATRMHSGQHSTQAQSTGQGGLSAPS 990

Query: 1461 SGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNEGQPPVTTL 1507
            S +        C  L    PA+ P     +S   +P++  +P   T+
Sbjct: 991  SLI--------CHSL--CDPASFPPDGATVSIKPEPEDR-EPNFATI 1026


>gi|27886555 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 3 isoform 3 [Homo sapiens]
          Length = 1065

 Score =  223 bits (568), Expect = 1e-57
 Identities = 150/394 (38%), Positives = 216/394 (54%), Gaps = 32/394 (8%)

Query: 299 ELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNE-PVVLQVFVGNDSGR-V 356
           ELKI VQP+T HRA Y TEGSRG+VK  T  G P VKL G+NE P+ LQ+F+G    R +
Sbjct: 432 ELKIEVQPKTHHRAHYETEGSRGAVKASTG-GHPVVKLLGYNEKPINLQMFIGTADDRYL 490

Query: 357 KPHGFYQACRVTGRNT-TPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEA 415
           +PH FYQ  R+TG+   T  +E+ I  T V+E+ L P NNM+ ++DC GILKLRN+D+E 
Sbjct: 491 RPHAFYQVHRITGKTVATASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIEL 550

Query: 416 RIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG--VPEILKKSLHSC 473
           R G     +K+TR RLVFRV+I +  G  L+LQ  S P+ C+Q +   +P I K S++SC
Sbjct: 551 RKGETDIGRKNTRVRLVFRVHIPQPSGKVLSLQIASIPVECSQRSAQELPHIEKYSINSC 610

Query: 474 SVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFHQNHLIVKVPPYHDQ 532
           SV G  E+ + G NFL  +K+IF E   D    W+ E +I  E     H++++VPPYH+ 
Sbjct: 611 SVNGGHEMVVTGSNFLPESKIIFLEKGQDGRPQWEVEGKIIREKCQGAHIVLEVPPYHNP 670

Query: 533 HITLPVSVGIYVVTNAGRSHDVQPFTYTPDPAAGALNVNVKKEI---SSPARPCSF-EEA 588
            +T  V V  Y+     +    Q FTYTP      +    ++EI   S P+ P     + 
Sbjct: 671 AVTAAVQVHFYLCNGKRKKSQSQRFTYTP----VLMKQEHREEIDLSSVPSLPVPHPAQT 726

Query: 589 MKAMKTTGCNLDKVNIIPNALM--TPLIPSSMIKSEDVTPMEVTAEKRSS---------- 636
            +    +GC+ D V     +L+   P   +SM+ S  +  ++   E  S           
Sbjct: 727 QRPSSDSGCSHDSVLSGQRSLICSIPQTYASMVTSSHLPQLQCRDESVSKEQHMIPSPIV 786

Query: 637 -TIFKTTKS--VGSTQQTLENISNIAGNGSFSSP 667
              F+ T +  VGS+ Q ++  +N+  NG    P
Sbjct: 787 HQPFQVTPTPPVGSSYQPMQ--TNVVYNGPTCLP 818



 Score = 45.4 bits (106), Expect = 4e-04
 Identities = 89/423 (21%), Positives = 155/423 (36%), Gaps = 68/423 (16%)

Query: 1143 LQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQ 1202
            ++G  + +  Q  +I L   P +N       Q  F+         QS   +      +Q+
Sbjct: 646  VEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYLCNGKRKKSQSQRFTYTPVLMKQE 705

Query: 1203 -------APISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSI 1255
                   + +  +  P  +Q Q      G     V  G          Q+  +     + 
Sbjct: 706  HREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSVLSG----------QRSLICSIPQTY 755

Query: 1256 VAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMAT--MASPKQP-PPNMIFN-PN 1311
             +M ++S   + Q + +   ++Q      I+        T  + S  QP   N+++N P 
Sbjct: 756  ASMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPVGSSYQPMQTNVVYNGPT 815

Query: 1312 QNPM--ANQEQQNQSIFHQQSNMAPM-NQEQQPMQ---FQSQS----------------T 1349
              P+  A+ ++ +  +F Q + ++ + N   QP+    F S +                T
Sbjct: 816  CLPINAASSQEFDSVLFQQDATLSGLVNLGCQPLSSIPFHSSNSGSTGHLLAHTPHSVHT 875

Query: 1350 VSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQD 1409
            +  LQ+ G   S + Q  L  SSP    + G PSSQ Q +T   S +  +   +      
Sbjct: 876  LPHLQSMGYHCSNTGQRSL--SSPVADQITGQPSSQLQPITYGPSHSGSATTASPAASHP 933

Query: 1410 MQQSPLYSPQNNMPGIQ---------GATSSPQPQATLFHNTAGGTMNQLQNSPGSSQQT 1460
            +  SPL  P +  P +Q         G  SSP P AT  H+    T  Q     G S  +
Sbjct: 934  LASSPLSGPPS--PQLQPMPYQSPSSGTASSPSP-ATRMHSGQHSTQAQSTGQGGLSAPS 990

Query: 1461 SGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNEGQPPVTTLLSQQMPENSPLAS 1520
            S +        C  L    PA+ P     +S   +P++  +P   T+  Q +  +  L +
Sbjct: 991  SLI--------CHSL--CDPASFPPDGATVSIKPEPEDR-EPNFATIGLQDITLDDDLFT 1039

Query: 1521 SIN 1523
            S N
Sbjct: 1040 SNN 1042


>gi|4758804 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 3 isoform 2 [Homo sapiens]
          Length = 1068

 Score =  223 bits (568), Expect = 1e-57
 Identities = 150/394 (38%), Positives = 216/394 (54%), Gaps = 32/394 (8%)

Query: 299 ELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNE-PVVLQVFVGNDSGR-V 356
           ELKI VQP+T HRA Y TEGSRG+VK  T  G P VKL G+NE P+ LQ+F+G    R +
Sbjct: 432 ELKIEVQPKTHHRAHYETEGSRGAVKASTG-GHPVVKLLGYNEKPINLQMFIGTADDRYL 490

Query: 357 KPHGFYQACRVTGRNT-TPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEA 415
           +PH FYQ  R+TG+   T  +E+ I  T V+E+ L P NNM+ ++DC GILKLRN+D+E 
Sbjct: 491 RPHAFYQVHRITGKTVATASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIEL 550

Query: 416 RIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG--VPEILKKSLHSC 473
           R G     +K+TR RLVFRV+I +  G  L+LQ  S P+ C+Q +   +P I K S++SC
Sbjct: 551 RKGETDIGRKNTRVRLVFRVHIPQPSGKVLSLQIASIPVECSQRSAQELPHIEKYSINSC 610

Query: 474 SVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFHQNHLIVKVPPYHDQ 532
           SV G  E+ + G NFL  +K+IF E   D    W+ E +I  E     H++++VPPYH+ 
Sbjct: 611 SVNGGHEMVVTGSNFLPESKIIFLEKGQDGRPQWEVEGKIIREKCQGAHIVLEVPPYHNP 670

Query: 533 HITLPVSVGIYVVTNAGRSHDVQPFTYTPDPAAGALNVNVKKEI---SSPARPCSF-EEA 588
            +T  V V  Y+     +    Q FTYTP      +    ++EI   S P+ P     + 
Sbjct: 671 AVTAAVQVHFYLCNGKRKKSQSQRFTYTP----VLMKQEHREEIDLSSVPSLPVPHPAQT 726

Query: 589 MKAMKTTGCNLDKVNIIPNALM--TPLIPSSMIKSEDVTPMEVTAEKRSS---------- 636
            +    +GC+ D V     +L+   P   +SM+ S  +  ++   E  S           
Sbjct: 727 QRPSSDSGCSHDSVLSGQRSLICSIPQTYASMVTSSHLPQLQCRDESVSKEQHMIPSPIV 786

Query: 637 -TIFKTTKS--VGSTQQTLENISNIAGNGSFSSP 667
              F+ T +  VGS+ Q ++  +N+  NG    P
Sbjct: 787 HQPFQVTPTPPVGSSYQPMQ--TNVVYNGPTCLP 818



 Score = 43.1 bits (100), Expect = 0.002
 Identities = 85/407 (20%), Positives = 148/407 (36%), Gaps = 68/407 (16%)

Query: 1143 LQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQ 1202
            ++G  + +  Q  +I L   P +N       Q  F+         QS   +      +Q+
Sbjct: 646  VEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYLCNGKRKKSQSQRFTYTPVLMKQE 705

Query: 1203 -------APISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSI 1255
                   + +  +  P  +Q Q      G     V  G          Q+  +     + 
Sbjct: 706  HREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSVLSG----------QRSLICSIPQTY 755

Query: 1256 VAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMAT--MASPKQP-PPNMIFN-PN 1311
             +M ++S   + Q + +   ++Q      I+        T  + S  QP   N+++N P 
Sbjct: 756  ASMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPVGSSYQPMQTNVVYNGPT 815

Query: 1312 QNPM--ANQEQQNQSIFHQQSNMAPM-NQEQQPMQ---FQSQS----------------T 1349
              P+  A+ ++ +  +F Q + ++ + N   QP+    F S +                T
Sbjct: 816  CLPINAASSQEFDSVLFQQDATLSGLVNLGCQPLSSIPFHSSNSGSTGHLLAHTPHSVHT 875

Query: 1350 VSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQD 1409
            +  LQ+ G   S + Q  L  SSP    + G PSSQ Q +T   S +  +   +      
Sbjct: 876  LPHLQSMGYHCSNTGQRSL--SSPVADQITGQPSSQLQPITYGPSHSGSATTASPAASHP 933

Query: 1410 MQQSPLYSPQNNMPGIQ---------GATSSPQPQATLFHNTAGGTMNQLQNSPGSSQQT 1460
            +  SPL  P +  P +Q         G  SSP P AT  H+    T  Q     G S  +
Sbjct: 934  LASSPLSGPPS--PQLQPMPYQSPSSGTASSPSP-ATRMHSGQHSTQAQSTGQGGLSAPS 990

Query: 1461 SGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNEGQPPVTTL 1507
            S +        C  L    PA+ P     +S   +P++  +P   T+
Sbjct: 991  SLI--------CHSL--CDPASFPPDGATVSIKPEPEDR-EPNFATI 1026


>gi|27886539 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 2 isoform B [Homo sapiens]
          Length = 921

 Score =  221 bits (563), Expect = 4e-57
 Identities = 123/284 (43%), Positives = 173/284 (60%), Gaps = 10/284 (3%)

Query: 290 QYPVKSEGK--ELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGH--NEPVVL 345
           ++P+ S+    EL+I VQP+  HRA Y TEGSRG+VK  T  G P V+L G+  N+P+ L
Sbjct: 398 EWPLSSQSGSYELRIEVQPKPHHRAHYETEGSRGAVKAPTG-GHPVVQLHGYMENKPLGL 456

Query: 346 QVFVGNDSGRV-KPHGFYQACRVTGRNTTPCKEVDIEGTT-VIEVGLDPSNNMTLAVDCV 403
           Q+F+G    R+ KPH FYQ  R+TG+  T      I G T V+E+ L+P NNM   +DC 
Sbjct: 457 QIFIGTADERILKPHAFYQVHRITGKTVTTTSYEKIVGNTKVLEIPLEPKNNMRATIDCA 516

Query: 404 GILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG-- 461
           GILKLRNAD+E R G     +K+TR RLVFRV+I    G  ++LQT S+PI C+Q +   
Sbjct: 517 GILKLRNADIELRKGETDIGRKNTRVRLVFRVHIPESSGRIVSLQTASNPIECSQRSAHE 576

Query: 462 VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFHQN 520
           +P + ++   SC V G +++ L G+NF   +KV+F E  +D +  W+ EA +D +    N
Sbjct: 577 LPMVERQDTDSCLVYGGQQMILTGQNFTSESKVVFTEKTTDGQQIWEMEATVDKDKSQPN 636

Query: 521 HLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTPDPA 564
            L V++P Y ++HI  PV V  YV+    +    Q FTY P PA
Sbjct: 637 MLFVEIPEYRNKHIRTPVKVNFYVINGKRKRSQPQHFTYHPVPA 680


>gi|27886541 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 2 isoform C [Homo sapiens]
          Length = 925

 Score =  221 bits (563), Expect = 4e-57
 Identities = 123/284 (43%), Positives = 173/284 (60%), Gaps = 10/284 (3%)

Query: 290 QYPVKSEGK--ELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGH--NEPVVL 345
           ++P+ S+    EL+I VQP+  HRA Y TEGSRG+VK  T  G P V+L G+  N+P+ L
Sbjct: 398 EWPLSSQSGSYELRIEVQPKPHHRAHYETEGSRGAVKAPTG-GHPVVQLHGYMENKPLGL 456

Query: 346 QVFVGNDSGRV-KPHGFYQACRVTGRNTTPCKEVDIEGTT-VIEVGLDPSNNMTLAVDCV 403
           Q+F+G    R+ KPH FYQ  R+TG+  T      I G T V+E+ L+P NNM   +DC 
Sbjct: 457 QIFIGTADERILKPHAFYQVHRITGKTVTTTSYEKIVGNTKVLEIPLEPKNNMRATIDCA 516

Query: 404 GILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG-- 461
           GILKLRNAD+E R G     +K+TR RLVFRV+I    G  ++LQT S+PI C+Q +   
Sbjct: 517 GILKLRNADIELRKGETDIGRKNTRVRLVFRVHIPESSGRIVSLQTASNPIECSQRSAHE 576

Query: 462 VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFHQN 520
           +P + ++   SC V G +++ L G+NF   +KV+F E  +D +  W+ EA +D +    N
Sbjct: 577 LPMVERQDTDSCLVYGGQQMILTGQNFTSESKVVFTEKTTDGQQIWEMEATVDKDKSQPN 636

Query: 521 HLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTPDPA 564
            L V++P Y ++HI  PV V  YV+    +    Q FTY P PA
Sbjct: 637 MLFVEIPEYRNKHIRTPVKVNFYVINGKRKRSQPQHFTYHPVPA 680


>gi|209862843 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 2 isoform D [Homo sapiens]
          Length = 901

 Score =  221 bits (563), Expect = 4e-57
 Identities = 123/284 (43%), Positives = 173/284 (60%), Gaps = 10/284 (3%)

Query: 290 QYPVKSEGK--ELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGH--NEPVVL 345
           ++P+ S+    EL+I VQP+  HRA Y TEGSRG+VK  T  G P V+L G+  N+P+ L
Sbjct: 378 EWPLSSQSGSYELRIEVQPKPHHRAHYETEGSRGAVKAPTG-GHPVVQLHGYMENKPLGL 436

Query: 346 QVFVGNDSGRV-KPHGFYQACRVTGRNTTPCKEVDIEGTT-VIEVGLDPSNNMTLAVDCV 403
           Q+F+G    R+ KPH FYQ  R+TG+  T      I G T V+E+ L+P NNM   +DC 
Sbjct: 437 QIFIGTADERILKPHAFYQVHRITGKTVTTTSYEKIVGNTKVLEIPLEPKNNMRATIDCA 496

Query: 404 GILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG-- 461
           GILKLRNAD+E R G     +K+TR RLVFRV+I    G  ++LQT S+PI C+Q +   
Sbjct: 497 GILKLRNADIELRKGETDIGRKNTRVRLVFRVHIPESSGRIVSLQTASNPIECSQRSAHE 556

Query: 462 VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFHQN 520
           +P + ++   SC V G +++ L G+NF   +KV+F E  +D +  W+ EA +D +    N
Sbjct: 557 LPMVERQDTDSCLVYGGQQMILTGQNFTSESKVVFTEKTTDGQQIWEMEATVDKDKSQPN 616

Query: 521 HLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTPDPA 564
            L V++P Y ++HI  PV V  YV+    +    Q FTY P PA
Sbjct: 617 MLFVEIPEYRNKHIRTPVKVNFYVINGKRKRSQPQHFTYHPVPA 660


>gi|27502386 nuclear factor of activated T-cells, cytosolic
           component 1 isoform C [Homo sapiens]
          Length = 930

 Score =  218 bits (556), Expect = 3e-56
 Identities = 125/284 (44%), Positives = 175/284 (61%), Gaps = 8/284 (2%)

Query: 285 PMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGH--NEP 342
           P L  Q P  S   EL+I VQP++ HRA Y TEGSRG+VK  +  G P V+L G+  NEP
Sbjct: 400 PALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVK-ASAGGHPIVQLHGYLENEP 458

Query: 343 VVLQVFVGNDSGRV-KPHGFYQACRVTGRN-TTPCKEVDIEGTTVIEVGLDPSNNMTLAV 400
           ++LQ+F+G    R+ +PH FYQ  R+TG+  +T   E  +  T V+E+ L P N+M   +
Sbjct: 459 LMLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENSMRAVI 518

Query: 401 DCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPA 460
           DC GILKLRN+D+E R G     +K+TR RLVFRV++ +  G TL+LQ  S+PI C+Q +
Sbjct: 519 DCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQVASNPIECSQRS 578

Query: 461 G--VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELF 517
              +P + K+S  S  V G +++ L G NFL+ +KVIF E   D  + W+ EA+ D +L 
Sbjct: 579 AQELPLVEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLC 638

Query: 518 HQNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTP 561
             N L+V++PP+ +Q IT PV V  YV     +    Q FTY P
Sbjct: 639 KPNSLVVEIPPFRNQRITSPVHVSFYVCNGKRKRSQYQRFTYLP 682



 Score = 31.2 bits (69), Expect = 8.1
 Identities = 44/192 (22%), Positives = 63/192 (32%), Gaps = 35/192 (18%)

Query: 53  LQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYS 112
           L LP +  T  A          G  PPA    D  S   ++  GG    F +S       
Sbjct: 43  LPLPTAHSTLPAPCHNLQTSTPGIIPPA----DHPSGYGAALDGGPAGYFLSSGHTRPDG 98

Query: 113 TSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDN 172
               +S  +++ SC      +N+   + ++                        ED+L +
Sbjct: 99  APALESPRIEITSCLGLYHNNNQFFHDVEV------------------------EDVLPS 134

Query: 173 SRMSCQDEGCGLES-----EQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQR 227
           S+ S       L S     + SC        S   N   SSY  N   P  S + +P Q 
Sbjct: 135 SKRSPSTATLSLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESNYSYPYASPQTSPWQS 194

Query: 228 PGV--KRRDCEE 237
           P V  K  D EE
Sbjct: 195 PCVSPKTTDPEE 206


>gi|19923350 nuclear factor of activated T-cells, cytosolic
           component 1 isoform B [Homo sapiens]
          Length = 825

 Score =  218 bits (556), Expect = 3e-56
 Identities = 125/284 (44%), Positives = 175/284 (61%), Gaps = 8/284 (2%)

Query: 285 PMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGH--NEP 342
           P L  Q P  S   EL+I VQP++ HRA Y TEGSRG+VK  +  G P V+L G+  NEP
Sbjct: 413 PALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVK-ASAGGHPIVQLHGYLENEP 471

Query: 343 VVLQVFVGNDSGRV-KPHGFYQACRVTGRN-TTPCKEVDIEGTTVIEVGLDPSNNMTLAV 400
           ++LQ+F+G    R+ +PH FYQ  R+TG+  +T   E  +  T V+E+ L P N+M   +
Sbjct: 472 LMLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENSMRAVI 531

Query: 401 DCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPA 460
           DC GILKLRN+D+E R G     +K+TR RLVFRV++ +  G TL+LQ  S+PI C+Q +
Sbjct: 532 DCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQVASNPIECSQRS 591

Query: 461 G--VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELF 517
              +P + K+S  S  V G +++ L G NFL+ +KVIF E   D  + W+ EA+ D +L 
Sbjct: 592 AQELPLVEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLC 651

Query: 518 HQNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTP 561
             N L+V++PP+ +Q IT PV V  YV     +    Q FTY P
Sbjct: 652 KPNSLVVEIPPFRNQRITSPVHVSFYVCNGKRKRSQYQRFTYLP 695



 Score = 31.2 bits (69), Expect = 8.1
 Identities = 44/192 (22%), Positives = 63/192 (32%), Gaps = 35/192 (18%)

Query: 53  LQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYS 112
           L LP +  T  A          G  PPA    D  S   ++  GG    F +S       
Sbjct: 56  LPLPTAHSTLPAPCHNLQTSTPGIIPPA----DHPSGYGAALDGGPAGYFLSSGHTRPDG 111

Query: 113 TSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDN 172
               +S  +++ SC      +N+   + ++                        ED+L +
Sbjct: 112 APALESPRIEITSCLGLYHNNNQFFHDVEV------------------------EDVLPS 147

Query: 173 SRMSCQDEGCGLES-----EQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQR 227
           S+ S       L S     + SC        S   N   SSY  N   P  S + +P Q 
Sbjct: 148 SKRSPSTATLSLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESNYSYPYASPQTSPWQS 207

Query: 228 PGV--KRRDCEE 237
           P V  K  D EE
Sbjct: 208 PCVSPKTTDPEE 219


>gi|27502393 nuclear factor of activated T-cells, cytosolic
           component 1 isoform A [Homo sapiens]
          Length = 716

 Score =  218 bits (556), Expect = 3e-56
 Identities = 125/284 (44%), Positives = 175/284 (61%), Gaps = 8/284 (2%)

Query: 285 PMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGH--NEP 342
           P L  Q P  S   EL+I VQP++ HRA Y TEGSRG+VK  +  G P V+L G+  NEP
Sbjct: 413 PALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVK-ASAGGHPIVQLHGYLENEP 471

Query: 343 VVLQVFVGNDSGRV-KPHGFYQACRVTGRN-TTPCKEVDIEGTTVIEVGLDPSNNMTLAV 400
           ++LQ+F+G    R+ +PH FYQ  R+TG+  +T   E  +  T V+E+ L P N+M   +
Sbjct: 472 LMLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENSMRAVI 531

Query: 401 DCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPA 460
           DC GILKLRN+D+E R G     +K+TR RLVFRV++ +  G TL+LQ  S+PI C+Q +
Sbjct: 532 DCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQVASNPIECSQRS 591

Query: 461 G--VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELF 517
              +P + K+S  S  V G +++ L G NFL+ +KVIF E   D  + W+ EA+ D +L 
Sbjct: 592 AQELPLVEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLC 651

Query: 518 HQNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTP 561
             N L+V++PP+ +Q IT PV V  YV     +    Q FTY P
Sbjct: 652 KPNSLVVEIPPFRNQRITSPVHVSFYVCNGKRKRSQYQRFTYLP 695



 Score = 31.2 bits (69), Expect = 8.1
 Identities = 44/192 (22%), Positives = 63/192 (32%), Gaps = 35/192 (18%)

Query: 53  LQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYS 112
           L LP +  T  A          G  PPA    D  S   ++  GG    F +S       
Sbjct: 56  LPLPTAHSTLPAPCHNLQTSTPGIIPPA----DHPSGYGAALDGGPAGYFLSSGHTRPDG 111

Query: 113 TSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDN 172
               +S  +++ SC      +N+   + ++                        ED+L +
Sbjct: 112 APALESPRIEITSCLGLYHNNNQFFHDVEV------------------------EDVLPS 147

Query: 173 SRMSCQDEGCGLES-----EQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQR 227
           S+ S       L S     + SC        S   N   SSY  N   P  S + +P Q 
Sbjct: 148 SKRSPSTATLSLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESNYSYPYASPQTSPWQS 207

Query: 228 PGV--KRRDCEE 237
           P V  K  D EE
Sbjct: 208 PCVSPKTTDPEE 219


>gi|27502391 nuclear factor of activated T-cells, cytosolic
           component 1 isoform E [Homo sapiens]
          Length = 812

 Score =  218 bits (556), Expect = 3e-56
 Identities = 125/284 (44%), Positives = 175/284 (61%), Gaps = 8/284 (2%)

Query: 285 PMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGH--NEP 342
           P L  Q P  S   EL+I VQP++ HRA Y TEGSRG+VK  +  G P V+L G+  NEP
Sbjct: 400 PALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVK-ASAGGHPIVQLHGYLENEP 458

Query: 343 VVLQVFVGNDSGRV-KPHGFYQACRVTGRN-TTPCKEVDIEGTTVIEVGLDPSNNMTLAV 400
           ++LQ+F+G    R+ +PH FYQ  R+TG+  +T   E  +  T V+E+ L P N+M   +
Sbjct: 459 LMLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENSMRAVI 518

Query: 401 DCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPA 460
           DC GILKLRN+D+E R G     +K+TR RLVFRV++ +  G TL+LQ  S+PI C+Q +
Sbjct: 519 DCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQVASNPIECSQRS 578

Query: 461 G--VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELF 517
              +P + K+S  S  V G +++ L G NFL+ +KVIF E   D  + W+ EA+ D +L 
Sbjct: 579 AQELPLVEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLC 638

Query: 518 HQNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTP 561
             N L+V++PP+ +Q IT PV V  YV     +    Q FTY P
Sbjct: 639 KPNSLVVEIPPFRNQRITSPVHVSFYVCNGKRKRSQYQRFTYLP 682



 Score = 31.2 bits (69), Expect = 8.1
 Identities = 44/192 (22%), Positives = 63/192 (32%), Gaps = 35/192 (18%)

Query: 53  LQLPPSRETSVASMSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYS 112
           L LP +  T  A          G  PPA    D  S   ++  GG    F +S       
Sbjct: 43  LPLPTAHSTLPAPCHNLQTSTPGIIPPA----DHPSGYGAALDGGPAGYFLSSGHTRPDG 98

Query: 113 TSVTDSKAMQVESCSSAVGVSNRGVSEKQLTSNTVQQHPSTPKRHTVLYISPPPEDLLDN 172
               +S  +++ SC      +N+   + ++                        ED+L +
Sbjct: 99  APALESPRIEITSCLGLYHNNNQFFHDVEV------------------------EDVLPS 134

Query: 173 SRMSCQDEGCGLES-----EQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQR 227
           S+ S       L S     + SC        S   N   SSY  N   P  S + +P Q 
Sbjct: 135 SKRSPSTATLSLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESNYSYPYASPQTSPWQS 194

Query: 228 PGV--KRRDCEE 237
           P V  K  D EE
Sbjct: 195 PCVSPKTTDPEE 206


>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 4 isoform 1 [Homo sapiens]
          Length = 964

 Score =  196 bits (499), Expect = 1e-49
 Identities = 116/283 (40%), Positives = 165/283 (58%), Gaps = 7/283 (2%)

Query: 285 PMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNE-PV 343
           P L    P + E  EL+I VQP   HRA Y TEGSRG+VK     G P VKL G++E P+
Sbjct: 467 PPLDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVK-AAPGGHPVVKLLGYSEKPL 525

Query: 344 VLQVFVGN-DSGRVKPHGFYQACRVTGRNT-TPCKEVDIEGTTVIEVGLDPSNNMTLAVD 401
            LQ+F+G  D   ++PH FYQ  R+TG+   T   E  + GT V+E+ L P NNM   +D
Sbjct: 526 TLQMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANID 585

Query: 402 CVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG 461
           C GILKLRN+D+E R G     +K+TR RLVFRV++ +  G  +++Q  S PI C+Q + 
Sbjct: 586 CAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSA 645

Query: 462 --VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFH 518
             +P++   S  +CSV+G EE+ L G NFL  +KV+F E   D +  W+ EA ++    +
Sbjct: 646 QELPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSN 705

Query: 519 QNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTP 561
           +  L + VP Y ++ ++ PV V  YV     +    Q F + P
Sbjct: 706 EVTLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLP 748


>gi|27886563 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 4 isoform 2 [Homo sapiens]
          Length = 902

 Score =  196 bits (499), Expect = 1e-49
 Identities = 116/283 (40%), Positives = 165/283 (58%), Gaps = 7/283 (2%)

Query: 285 PMLCGQYPVKSEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNE-PV 343
           P L    P + E  EL+I VQP   HRA Y TEGSRG+VK     G P VKL G++E P+
Sbjct: 404 PPLDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVK-AAPGGHPVVKLLGYSEKPL 462

Query: 344 VLQVFVGN-DSGRVKPHGFYQACRVTGRNT-TPCKEVDIEGTTVIEVGLDPSNNMTLAVD 401
            LQ+F+G  D   ++PH FYQ  R+TG+   T   E  + GT V+E+ L P NNM   +D
Sbjct: 463 TLQMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLEMTLLPENNMAANID 522

Query: 402 CVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG 461
           C GILKLRN+D+E R G     +K+TR RLVFRV++ +  G  +++Q  S PI C+Q + 
Sbjct: 523 CAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVVSVQAASVPIECSQRSA 582

Query: 462 --VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFH 518
             +P++   S  +CSV+G EE+ L G NFL  +KV+F E   D +  W+ EA ++    +
Sbjct: 583 QELPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGPDGKLQWEEEATVNRLQSN 642

Query: 519 QNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTP 561
           +  L + VP Y ++ ++ PV V  YV     +    Q F + P
Sbjct: 643 EVTLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFRFLP 685


>gi|27502388 nuclear factor of activated T-cells, cytosolic
           component 1 isoform D [Homo sapiens]
          Length = 353

 Score =  171 bits (433), Expect = 5e-42
 Identities = 94/223 (42%), Positives = 136/223 (60%), Gaps = 5/223 (2%)

Query: 344 VLQVFVGNDSGRV-KPHGFYQACRVTGRN-TTPCKEVDIEGTTVIEVGLDPSNNMTLAVD 401
           +LQ+F+G    R+ +PH FYQ  R+TG+  +T   E  +  T V+E+ L P N+M   +D
Sbjct: 1   MLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENSMRAVID 60

Query: 402 CVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIMRKDGSTLTLQTPSSPILCTQPAG 461
           C GILKLRN+D+E R G     +K+TR RLVFRV++ +  G TL+LQ  S+PI C+Q + 
Sbjct: 61  CAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQVASNPIECSQRSA 120

Query: 462 --VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSD-ENSWKSEAEIDMELFH 518
             +P + K+S  S  V G +++ L G NFL+ +KVIF E   D  + W+ EA+ D +L  
Sbjct: 121 QELPLVEKQSTDSYPVVGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLCK 180

Query: 519 QNHLIVKVPPYHDQHITLPVSVGIYVVTNAGRSHDVQPFTYTP 561
            N L+V++PP+ +Q IT PV V  YV     +    Q FTY P
Sbjct: 181 PNSLVVEIPPFRNQRITSPVHVSFYVCNGKRKRSQYQRFTYLP 223


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 93.2 bits (230), Expect = 2e-18
 Identities = 226/1026 (22%), Positives = 351/1026 (34%), Gaps = 172/1026 (16%)

Query: 595  TGCNLDKVNIIPNALMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSVGSTQQTLEN 654
            +G  LDK+     A   PL+   +++ E     E+  +++ S   +  +     QQ    
Sbjct: 3229 SGDELDKMESSLVASELPLLIEDLLEHEK---KELQKKQQLSAQLQPAQQQQQQQQQHSL 3285

Query: 655  ISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQ 714
            +S      + S P     PS    QQQ+           ++      QPG  P     +Q
Sbjct: 3286 LSAPGPAQAMSLPHEGSSPSLAGSQQQL-----------SLGLAGARQPG-LPQPLMPTQ 3333

Query: 715  LPNSDALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQI 774
             P        A   Q R   S  ++ + G +++     +A    QQS     +Q +  Q 
Sbjct: 3334 PP--------AHALQQRLAPSMAMVSNQGHMLSGQHGGQAGLVPQQS-----SQPVLSQK 3380

Query: 775  SSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQ-QLSSVLFSAP 833
                 P    +   Q  +QQ  A SF   T      + D++  + +A+   L  +     
Sbjct: 3381 PMGTMPPSMCMKPQQLAMQQQLANSFFPDTDLDKFAAEDIIDPIAKAKMVALKGIKKVMA 3440

Query: 834  DGNENVQEQLSADIFQQVSQIQSGVSPGMFSSTEPTVH------------TRPDNLLPGR 881
             G+  V   ++    QQVS +   +S G  S  +  V             ++P    P  
Sbjct: 3441 QGSIGVAPGMNR---QQVSLLAQRLSGGPSSDLQNHVAAGSGQERSAGDPSQPRPNPPTF 3497

Query: 882  AESV-----HPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSIC--QAAAQIQSELFP 934
            A+ V       Q E  L + QQ  Q Q +V+E    +  + ++++C  Q  A+     FP
Sbjct: 3498 AQGVINEADQRQYEEWLFHTQQLLQMQLKVLEEQIGVHRKSRKALCAKQRTAKKAGREFP 3557

Query: 935  STASANGNL---QQSPVYQQTSHMMSALSTNEDM---------------QMQCELFSSPP 976
               +    L   QQS + +Q   +      + ++               Q Q +  S+  
Sbjct: 3558 EADAEKLKLVTEQQSKIQKQLDQVRKQQKEHTNLMAEYRNKQQQQQQQQQQQQQQHSAVL 3617

Query: 977  AVSGNETSTTTTQQVAT--PGTTMFQTSSSGDGEETGTQAKQ------------IQNSVF 1022
            A+S +++    T+      PG  +        G+  G +                 N+  
Sbjct: 3618 ALSPSQSPRLLTKLPGQLLPGHGLQPPQGPPGGQAGGLRLTPGGMALPGQPGGPFLNTAL 3677

Query: 1023 QTMVQMQHSGDNQ----PQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFL 1078
                Q QHSG       P    F    ++ S+       Q   L  Q   M   Q    L
Sbjct: 3678 AQQQQQQHSGGAGSLAGPSGGFFPGNLALRSLGPDSRLLQERQLQLQQQRMQLAQK---L 3734

Query: 1079 QQSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQS 1138
            QQ    Q Q  H    +A  Q   Q+ QG        +  +Q      + + PP  H   
Sbjct: 3735 QQQQQQQQQQQHLLGQVAIQQ---QQQQGP------GVQTNQALGPKPQGLMPPSSHQGL 3785

Query: 1139 TIAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAA 1198
             +  L     PQ  Q     L  + +  LQ               +   QS   S  Q A
Sbjct: 3786 LVQQLS----PQPPQGPQGMLGPAQVAVLQQQHPGALGPQGPHRQVLMTQSRVLSSPQLA 3841

Query: 1199 FQQQAPISH-IQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVA 1257
             Q Q  + H + T    Q+Q Q  QQG       L  L        QQ  M  S    ++
Sbjct: 3842 QQGQGLMGHRLVTAQQQQQQQQHQQQG---SMAGLSHL--------QQSLMSHSGQPKLS 3890

Query: 1258 MQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMAN 1317
             Q     Q+ QQQQQ QQQQQ QQQQ      Q  +      +Q     +    Q  +  
Sbjct: 3891 AQPMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQ 3950

Query: 1318 QEQQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSES-------SQTPLFH 1370
            Q+QQ Q    QQ       Q+QQ M   +QS   +L +P   Q +           PL H
Sbjct: 3951 QQQQLQQQQQQQQQQFQQQQQQQQMGLLNQS--RTLLSPQQQQQQQVALGPGMPAKPLQH 4008

Query: 1371 -SSP---------------------QIQLVQGSPSSQEQQVTLFLSPASMSALQTSI--- 1405
             SSP                       +  +G  + Q   + +  +P SM+     +   
Sbjct: 4009 FSSPGALGPTLLLTGKEQNTVDPAVSSEATEGPSTHQGGPLAIGTTPESMATEPGEVKPS 4068

Query: 1406 ---NQQDMQQSPLYSPQNNMPGIQGATSSP---QPQATLFHNTAGGTMNQLQNSPGSSQQ 1459
               + Q +   P   PQ +   +Q     P   Q Q +L H   GG+  QL    GSS +
Sbjct: 4069 LSGDSQLLLVQPQPQPQPSSLQLQPPLRLPGQQQQQVSLLHTAGGGSHGQL--GSGSSSE 4126

Query: 1460 TSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQ----PGQPQNEGQPPVTTLLSQQMPEN 1515
             S +           LL     +L DQ  +++Q    P QP  E   P+      Q P+ 
Sbjct: 4127 ASSV---------PHLLAQPSVSLGDQPGSMTQNLLGPQQPMLE--RPMQNNTGPQPPKP 4175

Query: 1516 SPLASS 1521
             P+  S
Sbjct: 4176 GPVLQS 4181



 Score = 81.3 bits (199), Expect = 7e-15
 Identities = 193/856 (22%), Positives = 287/856 (33%), Gaps = 113/856 (13%)

Query: 708  AVSASSQLPNSDA-LLQQATQFQTR-ETQSREILQSDGTVVNLSQLTEASQQQQQSPLQE 765
            A  A  + P +DA  L+  T+ Q++ + Q  ++ +      NL       QQQQQ   Q+
Sbjct: 3549 AKKAGREFPEADAEKLKLVTEQQSKIQKQLDQVRKQQKEHTNLMAEYRNKQQQQQQQQQQ 3608

Query: 766  QAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQL 825
            Q Q     ++ +   SP  +++L   +              G +G + L    +    Q 
Sbjct: 3609 QQQQHSAVLALSPSQSPRLLTKLPGQLLPGHGLQPPQGPPGGQAGGLRLTPGGMALPGQP 3668

Query: 826  SSVLFSAPDGNENVQEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESV 885
                 +     +  Q+          +   +G S G F          PD+ L    +  
Sbjct: 3669 GGPFLNTALAQQQQQQHSGG------AGSLAGPSGGFFPGNLALRSLGPDSRLLQERQLQ 3722

Query: 886  HPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPS------TASA 939
              Q    L+ + QQQQQQQQ  +     V   QQ       Q    L P        +S 
Sbjct: 3723 LQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQGPGVQTNQALGPKPQGLMPPSSH 3782

Query: 940  NGNL--QQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTT 997
             G L  Q SP   Q    M   +    +Q Q      P    G       TQ        
Sbjct: 3783 QGLLVQQLSPQPPQGPQGMLGPAQVAVLQQQHPGALGP---QGPHRQVLMTQSRVLSSPQ 3839

Query: 998  MFQTSSSGDGEETGTQAKQIQNSVFQ---TMVQMQH------SGDNQPQVNLFSSTKSMM 1048
            + Q      G    T  +Q Q    Q   +M  + H      S   QP++    S + M 
Sbjct: 3840 LAQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGLSHLQQSLMSHSGQPKL----SAQPMG 3895

Query: 1049 SVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGS 1108
            S+Q    QQQ     QQ  ++   Q     QQ    Q QL   Q      Q L Q+ Q  
Sbjct: 3896 SLQQLQQQQQ----LQQQQQLQQQQQQQLQQQQQLQQQQLQQQQ----QQQQLQQQQQQQ 3947

Query: 1109 LFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSV---PQDQQSTNIFLSQS-PM 1164
            L      +   Q      +Q Q      Q  + +L  S     PQ QQ   + L    P 
Sbjct: 3948 LQQQQQQLQQQQ----QQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVALGPGMPA 4003

Query: 1165 NNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQG 1224
              LQ         F++P ++ P    +  EQ               P +S E  + P   
Sbjct: 4004 KPLQ--------HFSSPGALGPTLLLTGKEQNTV-----------DPAVSSEATEGPSTH 4044

Query: 1225 LFQPQVALGSLP------PNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQ 1278
               P +A+G+ P      P  +  S  G    SQ  +V  Q        Q Q   +   Q
Sbjct: 4045 QGGP-LAIGTTPESMATEPGEVKPSLSG---DSQLLLVQPQPQPQPSSLQLQPPLRLPGQ 4100

Query: 1279 QQQQQSILF-----SNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMA 1333
            QQQQ S+L      S+    +  +S     P+++  P+ +         Q++   Q  M 
Sbjct: 4101 QQQQVSLLHTAGGGSHGQLGSGSSSEASSVPHLLAQPSVSLGDQPGSMTQNLLGPQQPML 4160

Query: 1334 PMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQI-QL---VQGSPSSQEQQV 1389
                 ++PMQ    +T      PGP        P     P + QL   +QG  +   Q  
Sbjct: 4161 -----ERPMQ---NNTGPQPPKPGPVLQSGQGLPGVGIMPTVGQLRAQLQGVLAKNPQ-- 4210

Query: 1390 TLFLSPASMSALQTSINQQDMQQS-------PLYSPQNNMPGIQGATSSPQPQATLFHNT 1442
               LSP     LQ  + Q+ +QQS       P   P      +QG     QPQ   F   
Sbjct: 4211 LRHLSPQQQQQLQALLMQRQLQQSQAVRQTPPYQEPGTQTSPLQGLLGC-QPQLGGFPGP 4269

Query: 1443 AGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNEGQP 1502
              G + +L    G+  +  G             L++GP   P  +     P  PQ   +P
Sbjct: 4270 QTGPLQEL----GAGPRPQGPPRLPAPPGA---LSTGPVLGP--VHPTPPPSSPQEPKRP 4320

Query: 1503 PVTTLLSQQMPENSPL 1518
                  S Q+P  + L
Sbjct: 4321 SQLPSPSSQLPTEAQL 4336



 Score = 64.7 bits (156), Expect = 7e-10
 Identities = 154/652 (23%), Positives = 222/652 (34%), Gaps = 102/652 (15%)

Query: 704  GTFPAVSASSQL-PNSDALLQQATQFQTRETQSREILQSDGTVVNLSQ----LTEASQQQ 758
            G FP   A   L P+S  L ++  Q Q +  Q  + LQ         Q         QQQ
Sbjct: 3698 GFFPGNLALRSLGPDSRLLQERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQ 3757

Query: 759  QQSPLQEQAQTLQQQISSNIFPSPNS---VSQLQNTIQQLQAGSFTGSTAS-------GS 808
            QQ P  +  Q L  +    + PS +    V QL     Q   G    +  +       G+
Sbjct: 3758 QQGPGVQTNQALGPKPQGLMPPSSHQGLLVQQLSPQPPQGPQGMLGPAQVAVLQQQHPGA 3817

Query: 809  SGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQVSQI--QSGVSPG----- 861
             G     +QVL  Q ++ S    A  G   +  +L     QQ  Q   Q G   G     
Sbjct: 3818 LGPQGPHRQVLMTQSRVLSSPQLAQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGLSHLQ 3877

Query: 862  ---MFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQ 918
               M  S +P +  +P   L    +    Q +  L  QQQQQ QQQQ ++       + Q
Sbjct: 3878 QSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQ 3937

Query: 919  QSI----CQAAAQIQSELFPSTASANGNLQQSPVYQQ---TSHMMSALSTNEDMQMQCEL 971
            Q +     Q   Q Q +L           QQ    QQ    +   + LS  +  Q Q  L
Sbjct: 3938 QQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVAL 3997

Query: 972  -----------FSSP------------------PAVSGNETSTTTTQQ-----VATPGTT 997
                       FSSP                  PAVS   T   +T Q     + T   +
Sbjct: 3998 GPGMPAKPLQHFSSPGALGPTLLLTGKEQNTVDPAVSSEATEGPSTHQGGPLAIGTTPES 4057

Query: 998  M------FQTSSSGDGEETGTQAK-QIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSV 1050
            M       + S SGD +    Q + Q Q S  Q    ++  G  Q QV+L  +       
Sbjct: 4058 MATEPGEVKPSLSGDSQLLLVQPQPQPQPSSLQLQPPLRLPGQQQQQVSLLHTAGGGSHG 4117

Query: 1051 Q-NSGTQQQGNG---LFQQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQ 1106
            Q  SG+  + +    L  Q +  +  Q G+  Q        L  PQ P+ +     Q   
Sbjct: 4118 QLGSGSSSEASSVPHLLAQPSVSLGDQPGSMTQ-------NLLGPQQPMLERP--MQNNT 4168

Query: 1107 GSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSS------VPQDQQSTNIFLS 1160
            G     P P++ S         M P +   ++ +  +   +       PQ QQ     L 
Sbjct: 4169 GPQPPKPGPVLQSGQGLPGVGIM-PTVGQLRAQLQGVLAKNPQLRHLSPQQQQQLQALLM 4227

Query: 1161 QSPMNNLQTNTVAQEAFFAAPNS-ISPLQSTSNSEQQAA---FQQQAPISHIQT-PMLSQ 1215
            Q  +   Q+  V Q   +  P +  SPLQ     + Q       Q  P+  +   P    
Sbjct: 4228 QRQLQ--QSQAVRQTPPYQEPGTQTSPLQGLLGCQPQLGGFPGPQTGPLQELGAGPRPQG 4285

Query: 1216 EQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQ 1267
                P   G       LG + P P P S Q     SQ  + +  S  P++ Q
Sbjct: 4286 PPRLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQ--LPSPSSQLPTEAQ 4335



 Score = 39.7 bits (91), Expect = 0.023
 Identities = 45/165 (27%), Positives = 65/165 (39%), Gaps = 19/165 (11%)

Query: 1167 LQTNTVAQE--AFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQP---- 1220
            +Q NT+ QE     AA  ++ P  S        AF+Q   +S  QTP    +        
Sbjct: 2695 IQRNTLRQEKETAAAAAGAVGPPGSWGAEPSSPAFEQ---LSRGQTPFAGTQDKSSLVGL 2751

Query: 1221 PQQGLFQPQVALGSLPPN-----PMPQSQQGTMFQSQHSIV----AMQSNSPSQEQQQQQ 1271
            P   L  P +  GS P +     P P +   +M  +   +V    A    +P       Q
Sbjct: 2752 PPSKLSGPILGPGSFPSDDRLSRPPPPATPSSMDVNSRQLVGGSQAFYQRAPYPGSLPLQ 2811

Query: 1272 QQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMA 1316
            QQQQQ  QQQQ +   S +  M+    P  P P +      +P+A
Sbjct: 2812 QQQQQLWQQQQATAATSMRFAMSA-RFPSTPGPELGRQALGSPLA 2855



 Score = 34.3 bits (77), Expect = 0.96
 Identities = 72/318 (22%), Positives = 117/318 (36%), Gaps = 48/318 (15%)

Query: 1186 PLQSTSNSEQQAAFQQQA-PISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQ 1244
            P  S+ ++ ++A+F     P +H+ TP              F+ +    +LP  P     
Sbjct: 3172 PFSSSGHTAEKASFGATGGPPAHLLTPSPLSGPGGSSLLEKFELESGALTLPGGPAASGD 3231

Query: 1245 QGTMFQSQHSIVAMQ-----------SNSPSQEQQQ---QQQQQQQQQQQQQQSILFSNQ 1290
            +    +S  S+VA +                Q++QQ   Q Q  QQQQQQQQQ  L S  
Sbjct: 3232 ELDKMES--SLVASELPLLIEDLLEHEKKELQKKQQLSAQLQPAQQQQQQQQQHSLLSAP 3289

Query: 1291 NTMATMASPKQ-PPPNMIFNPNQNPM----ANQEQQNQSIFHQQSNMAPMNQEQQP--MQ 1343
                 M+ P +   P++  +  Q  +    A Q    Q +   Q     + Q   P    
Sbjct: 3290 GPAQAMSLPHEGSSPSLAGSQQQLSLGLAGARQPGLPQPLMPTQPPAHALQQRLAPSMAM 3349

Query: 1344 FQSQSTVSSLQNPG-----PTQSES---SQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSP 1395
              +Q  + S Q+ G     P QS     SQ P+    P + +     + Q+Q    F   
Sbjct: 3350 VSNQGHMLSGQHGGQAGLVPQQSSQPVLSQKPMGTMPPSMCMKPQQLAMQQQLANSFFPD 3409

Query: 1396 ASMSALQTSINQQDMQQSPLYSPQNNMPGI-----QGATS-----SPQPQATLFHNTAGG 1445
              +         +D+      +    + GI     QG+       + Q  + L    +GG
Sbjct: 3410 TDLDKFAA----EDIIDPIAKAKMVALKGIKKVMAQGSIGVAPGMNRQQVSLLAQRLSGG 3465

Query: 1446 TMNQLQN--SPGSSQQTS 1461
              + LQN  + GS Q+ S
Sbjct: 3466 PSSDLQNHVAAGSGQERS 3483



 Score = 32.3 bits (72), Expect = 3.7
 Identities = 59/300 (19%), Positives = 101/300 (33%), Gaps = 30/300 (10%)

Query: 1163 PMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQ 1222
            P   L  + + +    + P   SPL         +   + +P S ++   LS  +  PP 
Sbjct: 470  PPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPS 529

Query: 1223 QGLFQPQVALGSLPPNPMPQS---QQGTMFQSQHSI-------VAMQSNSPSQEQQQQQQ 1272
              L  P     S PP   P S   ++  +      +        +  S  P +       
Sbjct: 530  PALETPL----SPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPP 585

Query: 1273 QQQQQQQQQQQSILF----SNQNTMATMASPKQPPP---NMIFNPNQNPMA-NQEQQNQS 1324
            ++       + S LF     +  +     SP  PPP    +   P  +PM+   E+   S
Sbjct: 586  EESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMS 645

Query: 1325 IFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQ---SESSQTPLFHSSPQIQLVQGS 1381
               + S ++P+    +      +S +S      PT      S  +P    SP     + S
Sbjct: 646  PPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDS 705

Query: 1382 PSSQEQQVTLFLSPASMSALQTSINQQDM---QQSPLYSPQNNMPGIQGATSSP--QPQA 1436
            P+S   + +L   P   S L     +  +    + P  SP+   P +      P   PQA
Sbjct: 706  PASPPPEDSLMSLPLEESPLLPLPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQA 765


>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
          Length = 748

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 103/364 (28%), Positives = 133/364 (36%), Gaps = 55/364 (15%)

Query: 1179 AAPNSISPLQSTS--NSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLP 1236
            A P +   LQ  +    +QQ  FQQQ   +  Q     Q+Q    QQ   Q Q       
Sbjct: 147  ATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVVQQ 206

Query: 1237 PNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQ------------QQQQQQQQQQQQS 1284
               + Q QQ    Q QH I     N    +QQQQQ            QQQQQQQQQQQQ 
Sbjct: 207  QQQLQQQQQ----QQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQ 262

Query: 1285 ILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQF 1344
             L +            QPPP+         M + +        QQ  +A     Q P Q 
Sbjct: 263  ALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQS 322

Query: 1345 QSQSTVSSLQNPGPTQSESSQTPL-FHSSPQ-IQLVQGSPSSQEQQVTLFLSPAS-MSAL 1401
            Q+Q  VS  Q   P Q   +Q PL F  +P  +Q     P  Q+QQ  +  + A+ M A 
Sbjct: 323  QTQPLVSQAQ-ALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQMVAP 381

Query: 1402 QTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNSPGSSQQTS 1461
               ++Q  +      SP   +   Q     PQP                Q    SSQ  S
Sbjct: 382  GVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSP--------------QPGQPSSQPNS 427

Query: 1462 GMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNEGQPPVTTLLSQ--QMPENSPLA 1519
                          ++SGPA  P   +    P QP    Q PVT    Q   +P   PL 
Sbjct: 428  N-------------VSSGPAPSPSSFLPSPSP-QP---SQSPVTARTPQNFSVPSPGPLN 470

Query: 1520 SSIN 1523
            + +N
Sbjct: 471  TPVN 474



 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 84/344 (24%), Positives = 119/344 (34%), Gaps = 32/344 (9%)

Query: 1211 PMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQ 1270
            PM    Q  P   G+    +A+ S          Q    Q Q      Q    +  QQQQ
Sbjct: 122  PMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQ 181

Query: 1271 QQQQQQQQQQQQQSILFSNQ---NTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFH 1327
            QQQQQQQ Q QQ ++    Q        +   +Q   ++I   +QN    Q+QQ Q    
Sbjct: 182  QQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQL--- 238

Query: 1328 QQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQI-QLVQGSPSSQE 1386
            Q+     + Q+QQ  Q Q Q    +LQ   P Q    Q P    S  + Q +Q    +Q 
Sbjct: 239  QRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQH 298

Query: 1387 QQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSP-------------- 1432
             Q         ++  Q S      Q  PL S    +PG    T  P              
Sbjct: 299  HQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPP 358

Query: 1433 -QPQATLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAIS 1491
             QPQ                 +PG     S + +    +   Q+ T  P ++P       
Sbjct: 359  VQPQVQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQT--PQSMPPPPQPSP 416

Query: 1492 QPGQPQNEGQ--------PPVTTLLSQQMPENSPLASSINTNQN 1527
            QPGQP ++          P  ++ L    P+ S    +  T QN
Sbjct: 417  QPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQN 460



 Score = 64.3 bits (155), Expect = 9e-10
 Identities = 95/397 (23%), Positives = 135/397 (34%), Gaps = 41/397 (10%)

Query: 975  PPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDN 1034
            PP  SG    +      ATP T +     +   ++   Q +Q Q +  Q   Q Q     
Sbjct: 130  PPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQF 189

Query: 1035 QPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQQSSHSQAQLFHPQNP 1094
            Q Q +        +  Q    QQQ     QQ   ++ L   N  QQ    Q QL      
Sbjct: 190  QAQQSAMQQQFQAVVQQQQQLQQQQ----QQQQHLIKLHHQN-QQQIQQQQQQL----QR 240

Query: 1095 IADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQS 1154
            IA  Q   Q+ Q             Q         QPPM   Q         ++PQ  Q 
Sbjct: 241  IAQLQLQQQQQQ----QQQQQQQQQQALQAQPPIQQPPMQQPQPP----PSQALPQQLQQ 292

Query: 1155 TNIFLSQSPMNNLQTNTVAQEAFFAAP--NSISPLQSTSNSEQQAAFQQQAPISHIQTPM 1212
             +      P    Q   VAQ      P  +   PL S + +        Q P+  ++ PM
Sbjct: 293  MHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPM 352

Query: 1213 LSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQ 1272
            + Q+    PQ    Q  V          P  Q      SQ S+  + S SP Q+ Q  Q 
Sbjct: 353  VVQQPPVQPQVQQQQTAVQTAQAAQMVAPGVQ-----VSQSSLPMLSSPSPGQQVQTPQS 407

Query: 1273 QQQQQQQQQQQSILFSNQNTMATMA---SPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQ 1329
                 Q   Q     S  N+  +     SP    P+    P+Q+P+  +  QN S+    
Sbjct: 408  MPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSV---- 463

Query: 1330 SNMAPMNQEQQPMQFQSQSTVSSLQNP-GPTQSESSQ 1365
             +  P+N    P         SS+ +P G +Q+E  Q
Sbjct: 464  PSPGPLNTPVNP---------SSVMSPAGSSQAEEQQ 491



 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 70/295 (23%), Positives = 103/295 (34%), Gaps = 25/295 (8%)

Query: 707 PAVSASSQLPNSDALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQ 766
           P    S   P+S A++  AT     + Q   + Q         Q   A QQQQQ   Q+Q
Sbjct: 129 PPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQ 188

Query: 767 AQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLS 826
            Q  Q  +            QLQ   QQ Q                   QQ+ + QQQL 
Sbjct: 189 FQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQ---------QQIQQQQQQLQ 239

Query: 827 SVLFSAPDGNENVQEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVH 886
            +        +  Q+Q      QQ  Q Q  +        +P     P   LP + + +H
Sbjct: 240 RIA-QLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPP----PSQALPQQLQQMH 294

Query: 887 PQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQS---ICQAAAQIQSELFPST----ASA 939
               +T  +Q   Q QQ  V ++  + +    Q+   + QA A     L+         A
Sbjct: 295 ----HTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRA 350

Query: 940 NGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQVATP 994
              +QQ PV  Q     +A+ T +  QM         +     +S +  QQV TP
Sbjct: 351 PMVVQQPPVQPQVQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQTP 405



 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 87/403 (21%), Positives = 130/403 (32%), Gaps = 84/403 (20%)

Query: 893  LSNQQQQQQQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQT 952
            L  QQQQQQ QQQ   +      + QQ   QA      + F +       LQQ    QQ 
Sbjct: 160  LQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQQ--QQQQ 217

Query: 953  SHMMSALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGT 1012
             H++     N+    Q                                            
Sbjct: 218  QHLIKLHHQNQQQIQQ-------------------------------------------- 233

Query: 1013 QAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQ----QGNGLFQQGNE 1068
            Q +Q+Q  + Q  +Q Q     Q Q     + ++   +Q    QQ        L QQ   
Sbjct: 234  QQQQLQR-IAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQ--- 289

Query: 1069 MMSLQSGNFLQQSSHSQAQLFHP---QNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTS 1125
                     LQQ  H+Q     P   Q P+A  Q      Q        P+V SQ     
Sbjct: 290  ---------LQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQS----QTQPLV-SQAQALP 335

Query: 1126 SEQM--QPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNS 1183
             + +  QPP+   ++ + V Q    PQ QQ       Q+ +   Q   +       + +S
Sbjct: 336  GQMLYTQPPLKFVRAPMVVQQPPVQPQVQQ------QQTAVQTAQAAQMVAPGVQVSQSS 389

Query: 1184 ISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQS 1243
            + P+ S+ +  QQ    Q  P     +P   Q  +QP       P  +  S  P+P PQ 
Sbjct: 390  L-PMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQP 448

Query: 1244 QQGTMFQSQHSIVAMQS----NSPSQEQQQQQQQQQQQQQQQQ 1282
             Q  +        ++ S    N+P             Q ++QQ
Sbjct: 449  SQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQ 491



 Score = 41.6 bits (96), Expect = 0.006
 Identities = 84/393 (21%), Positives = 130/393 (33%), Gaps = 42/393 (10%)

Query: 679  QQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSDALLQQATQFQTRETQSREI 738
            QQQ Q + +  +    +Q Q   Q         S+      A++QQ  Q Q ++ Q + +
Sbjct: 161  QQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHL 220

Query: 739  LQSDGTVVNLSQLTEASQQQQ---QSPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQL 795
            ++      N  Q+ +  QQ Q   Q  LQ+Q Q  QQQ             Q Q  IQQ 
Sbjct: 221  IKLHHQ--NQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQ-----QQALQAQPPIQQ- 272

Query: 796  QAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQVSQIQ 855
                        S      +QQ+   Q          P   +N   QL      Q    Q
Sbjct: 273  --PPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQ 330

Query: 856  SGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQQQQQQQVMESSAAMVM 915
            +   PG    T+P        L   RA  V  Q       Q Q QQQQ  V  + AA ++
Sbjct: 331  AQALPGQMLYTQPP-------LKFVRAPMVVQQP----PVQPQVQQQQTAVQTAQAAQMV 379

Query: 916  EMQQSICQAAAQIQSELFPSTASANGNLQQSPVY------QQTSHMMSALSTNEDMQMQC 969
                 + Q++  + S   P            P        Q +S   S +S+        
Sbjct: 380  APGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSS 439

Query: 970  ELFSSPPAVSGNETSTTTTQQVATPGTTMFQT------------SSSGDGEETGTQAKQI 1017
             L S  P  S +  +  T Q  + P      T            SS  + ++   + KQ+
Sbjct: 440  FLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQL 499

Query: 1018 QNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSV 1050
               +      +     N+ +    S  KS++ +
Sbjct: 500  SKYIEPLRRMINKIDKNEDRKKDLSKMKSLLDI 532


>gi|33286444 mastermind-like 2 [Homo sapiens]
          Length = 1156

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 178/712 (25%), Positives = 257/712 (36%), Gaps = 150/712 (21%)

Query: 884  SVHPQSENTLSNQQQQQQQQ---------QQVMESSAAMVMEMQQSICQAAAQIQSELFP 934
            SV P S+  L N      +Q         QQ   S+    + M++ +      I+SE  P
Sbjct: 317  SVPPMSDLELENMINATIKQDDPFNIDLGQQSQRSTPRPSLPMEKIV------IKSEYSP 370

Query: 935  S-TASANGNLQQSPVYQQTSHMM--SALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQV 991
              T   +G+ Q  P     +  M  SALST+  +    +  + P   SG   +  + Q+V
Sbjct: 371  GLTQGPSGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEV 430

Query: 992  ATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQ 1051
            +                    Q KQI  +  Q     QH   +QP       + +  S  
Sbjct: 431  SH-----------------AQQLKQIAANRQQHARMQQHQQQHQPTNWSALPSSAGPSPG 473

Query: 1052 NSGTQQQGNGLFQQGNEMMSLQSGNFLQQSSHS-----QAQLFHPQNPIADAQNLS---- 1102
              G ++  +  F  G +  S QS      +  S      A   +   P A   +L     
Sbjct: 474  PFGQEKIPSPSF--GQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQ 531

Query: 1103 ---QETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFL 1159
               Q+   S  ++P+P +  +   T       P+FH  S  A         +QQ  ++  
Sbjct: 532  QKPQDLSRSFINNPHPAMEPRQGNTK------PLFHFNSDQA---------NQQMPSVLP 576

Query: 1160 SQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQ 1219
            SQ                    N  S L  T   +QQ   QQQ      Q     Q+Q Q
Sbjct: 577  SQ--------------------NKPSLLHYTQQQQQQQQQQQQQ-----QQQQQQQQQQQ 611

Query: 1220 PPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQ 1279
              QQ   Q Q ++ +       Q QQ    Q Q SI A Q     Q+QQQQQQQQQQQQQ
Sbjct: 612  QQQQQQQQQQSSISA-------QQQQ----QQQSSISAQQ-----QQQQQQQQQQQQQQQ 655

Query: 1280 QQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQ 1339
            QQQQ       ++    + P QP       P Q  +  Q+ QNQ I       A M  + 
Sbjct: 656  QQQQQQQQQQPSSQPAQSLPSQPLLRSPL-PLQQKLLLQQMQNQPI-------AGMGYQV 707

Query: 1340 QPMQFQSQSTVSSLQNPGPTQSE-------------SSQTPLFHSS--PQIQLVQGSPSS 1384
               Q Q Q +V   QN GP+ S              +SQ  L +     + Q +Q     
Sbjct: 708  SQQQRQDQHSVVG-QNTGPSPSPNPCSNPNTGSGYMNSQQSLLNQQLMGKKQTLQRQIME 766

Query: 1385 QEQQVTL---FLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFHN 1441
            Q+QQ+ L    L+ A   A Q  IN+   +  P Y  Q    G       P  Q +   +
Sbjct: 767  QKQQLLLQQQMLADAEKIAPQDQINRHLSRPPPDYKDQRRNVG----NMQPTAQYSGGSS 822

Query: 1442 TAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNE-- 1499
            T     NQ   +P S+          +  N S L TS    +P    A+   G   N   
Sbjct: 823  TISLNSNQALANPVSTHTI-------LTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLPC 875

Query: 1500 GQP---PVTTLLSQQMPENSPLASSINTNQNIEKIDLLVSLQNQGNNLTGSF 1548
             QP    VT+ ++Q   + +P    +  NQN   +    +L    NN   +F
Sbjct: 876  NQPNTYSVTSGMNQLTQQRNP--KQLLANQNNPMMPRPPTLGPSNNNNVATF 925



 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 224/1035 (21%), Positives = 359/1035 (34%), Gaps = 193/1035 (18%)

Query: 535  TLPVSVGIYVVTNAGRSHDVQPFTYTPDPAAGALNVNVKKEISSPARPCSFEEAMKAMKT 594
            TLP+S      TN   SH       T  P  G  N+ +K+    P    S  + M    T
Sbjct: 232  TLPMSQAPLRKTNTLPSH-------THSPGNGLFNMGLKEVKKEPGETLSCSKHMDGQMT 284

Query: 595  TGCNLDKVNIIPNA--------LMTPLIPSSMIKSEDVTPMEVTAEKRSSTIFKTTKSVG 646
                  + NI PN         LM P +     +  +++   ++  +  + I  T K   
Sbjct: 285  ------QENIFPNRYGDDPGEQLMDPELQELFNELTNISVPPMSDLELENMINATIK--- 335

Query: 647  STQQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPE-TLTTIQTQDISQPGT 705
              Q    NI    G  S  S     LP E    + +    Y+P  T     +  +  P  
Sbjct: 336  --QDDPFNID--LGQQSQRSTPRPSLPME----KIVIKSEYSPGLTQGPSGSPQLRPPSA 387

Query: 706  FPAVS-ASSQLPNSD---ALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQS 761
             PA S A+S L  S    ++ Q   Q QT    SR  L S   V +  QL + +  +QQ 
Sbjct: 388  GPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRA-LPSWQEVSHAQQLKQIAANRQQH 446

Query: 762  PLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEA 821
               +Q Q   Q  + +  PS    S      +++ + SF   T S  S  +  V      
Sbjct: 447  ARMQQHQQQHQPTNWSALPSSAGPSPGPFGQEKIPSPSFGQQTFSPQSSPMPGVAGGSGQ 506

Query: 822  QQQLSSVLF----SAPDGNENV-QEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPD- 875
             + +++ ++    SA  G+ +V  +Q   D+ +               +T+P  H   D 
Sbjct: 507  SKVMANYMYKAGPSAQGGHLDVLMQQKPQDLSRSFINNPHPAMEPRQGNTKPLFHFNSDQ 566

Query: 876  ------NLLPGRAES-----VHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQA 924
                  ++LP + +         Q +     QQQQQQQQQQ  +       + QQS   A
Sbjct: 567  ANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISA 626

Query: 925  AAQIQSELFPSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNETS 984
              Q Q +   S+ SA    QQ    QQ           +  Q   +   S P+     + 
Sbjct: 627  QQQQQQQ---SSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSP 683

Query: 985  TTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSST 1044
                Q++      M     +G G +   Q +Q Q+SV       Q++G + P  N  S+ 
Sbjct: 684  LPLQQKLLL--QQMQNQPIAGMGYQVSQQQRQDQHSVVG-----QNTGPS-PSPNPCSNP 735

Query: 1045 KSMMSVQNSGTQQQGNGLFQQG--NEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLS 1102
             +     NS          QQ   N+ +  +     +Q    + QL   Q  +ADA+ ++
Sbjct: 736  NTGSGYMNS----------QQSLLNQQLMGKKQTLQRQIMEQKQQLLLQQQMLADAEKIA 785

Query: 1103 QETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQS 1162
             + Q +  H   P    +    +   MQP   +S  +  +   S             +Q+
Sbjct: 786  PQDQINR-HLSRPPPDYKDQRRNVGNMQPTAQYSGGSSTISLNS-------------NQA 831

Query: 1163 PMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQ 1222
              N + T+T+        PN  S L STS+  +               P LS        
Sbjct: 832  LANPVSTHTI------LTPN--SSLLSTSHGTRM--------------PSLS---TAVQN 866

Query: 1223 QGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQ 1282
             G++      G+LP N                    Q N+ S      Q  QQ+  +Q  
Sbjct: 867  MGMY------GNLPCN--------------------QPNTYSVTSGMNQLTQQRNPKQ-- 898

Query: 1283 QSILFSNQNTMATMASPKQPPPNMIFNPNQNPMA--------NQEQQNQSIFHQQSNMAP 1334
               L +NQN      +P  P P  +   N N +A        N +Q   ++ H  ++M P
Sbjct: 899  ---LLANQN------NPMMPRPPTLGPSNNNNVATFGAGSVGNSQQLRPNLTHSMASMPP 949

Query: 1335 MNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLS 1394
              Q    +   S +T  +  +   T  +        +S  ++   G+P++          
Sbjct: 950  --QRTSNVMITSNTTAPNWASQEGTSKQQEAL----TSAGVRFPTGTPAAYTPN------ 997

Query: 1395 PASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNSP 1454
                 +LQ ++  Q   Q  +  P    P +Q      +P   +     G TM  L+   
Sbjct: 998  ----QSLQQAVGSQQFSQRAVAPPNQLTPAVQ-----MRPMNQMSQTLNGQTMGPLRGLN 1048

Query: 1455 GSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQ--PQNEGQPPVTTLLSQQM 1512
                Q S   L     N +Q  T     L      I+QP    P N   P  ++   Q  
Sbjct: 1049 LRPNQLSTQIL----PNLNQSGTG----LNQSRTGINQPPSLTPSNFPSPNQSSRAFQGT 1100

Query: 1513 PENSPLASSINTNQN 1527
              +S LA    + QN
Sbjct: 1101 DHSSDLAFDFLSQQN 1115


>gi|93141033 PAX interacting protein 1 [Homo sapiens]
          Length = 1069

 Score = 83.2 bits (204), Expect = 2e-15
 Identities = 84/307 (27%), Positives = 120/307 (39%), Gaps = 36/307 (11%)

Query: 1093 NPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQ 1152
            N +A  QNL    +  +  + +P V +  + T++  +Q  M    +   +LQ  S P   
Sbjct: 311  NLMAAGQNLQSSERSEMIATWSPAVRTLRNITNNADIQQ-MNRPSNVAHILQTLSAPTKN 369

Query: 1153 QSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPM 1212
                  L Q   ++ Q +T A    F+              +Q    QQQ P+ H+Q   
Sbjct: 370  ------LEQQVNHSQQGHTNANAVLFSQVKVTPETHMLQQQQQAQQQQQQHPVLHLQPQQ 423

Query: 1213 LSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQE------ 1266
            + Q Q Q  QQ   QP       PP+P  Q QQ       H     Q   P Q+      
Sbjct: 424  IMQLQQQQQQQISQQPYP---QQPPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQ 480

Query: 1267 ----QQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQN 1322
                QQQ Q  QQQ   QQQ   L  +Q     +A  +Q          Q+ +  Q+QQ 
Sbjct: 481  LHRPQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQ----------QHSLLQQQQQQ 530

Query: 1323 QSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSP 1382
            Q    QQ  +  M+Q+QQ  Q QSQ+     Q    +Q+   Q P      Q Q  Q  P
Sbjct: 531  QI---QQQQLQRMHQQQQQQQMQSQTAPHLSQT---SQALQHQVPPQQPPQQQQQQQPPP 584

Query: 1383 SSQEQQV 1389
            S Q+ Q+
Sbjct: 585  SPQQHQL 591



 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 96/405 (23%), Positives = 156/405 (38%), Gaps = 49/405 (12%)

Query: 1050 VQNSGTQQQGNGLFQQGNEMMSLQSGN---FLQQSSHSQAQLFHPQNPIADAQNLSQETQ 1106
            V+N     Q  G   + +   S Q G+     Q S  S  +    +    D+ + S E Q
Sbjct: 201  VENEEQDSQNEGSTDEKSSPASSQEGSPSGDQQFSPKSNTEKSKGELMFDDSSDSSPEKQ 260

Query: 1107 G-SLFHSPNPIVHSQTSTTSSEQ-MQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQSPM 1164
              +L  +P  +     +     Q  +P + +  + +  + G+ +P + +   +   Q   
Sbjct: 261  ERNLNWTPAEVPQLAAAKRRLPQGKEPGLINLCANVPPVPGNILPPEVRGNLMAAGQ--- 317

Query: 1165 NNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLS-----QEQAQ 1219
             NLQ++  ++     +P ++  L++ +N+       + + ++HI   + +     ++Q  
Sbjct: 318  -NLQSSERSEMIATWSP-AVRTLRNITNNADIQQMNRPSNVAHILQTLSAPTKNLEQQVN 375

Query: 1220 PPQQGLFQPQVALGSL-----PPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQ 1274
              QQG       L S        + + Q QQ    Q QH ++ +Q     Q QQQQQQQ 
Sbjct: 376  HSQQGHTNANAVLFSQVKVTPETHMLQQQQQAQQQQQQHPVLHLQPQQIMQLQQQQQQQI 435

Query: 1275 QQQ-----------QQQQQQSILFSNQNTMATMASPKQP--PPNMIFNPNQNPMANQEQQ 1321
             QQ           QQQQQQ     +Q +   +  P+Q   PP  +  P Q     Q  Q
Sbjct: 436  SQQPYPQQPPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQLHRPQQQ---LQPFQ 492

Query: 1322 NQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGS 1381
             Q    QQ +    +Q QQ    Q Q   S LQ     Q +  Q    H   Q Q +Q  
Sbjct: 493  QQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQQMQSQ 552

Query: 1382 PSSQEQQVTLFLSPASMSALQTSI-----NQQDMQQSPLYSPQNN 1421
             +    Q +         ALQ  +      QQ  QQ P  SPQ +
Sbjct: 553  TAPHLSQTS--------QALQHQVPPQQPPQQQQQQQPPPSPQQH 589



 Score = 65.1 bits (157), Expect = 5e-10
 Identities = 74/258 (28%), Positives = 95/258 (36%), Gaps = 27/258 (10%)

Query: 1087 QLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQGS 1146
            Q+  P N     Q LS  T+    +    + HSQ   T++  +            +LQ  
Sbjct: 349  QMNRPSNVAHILQTLSAPTK----NLEQQVNHSQQGHTNANAVLFSQVKVTPETHMLQQQ 404

Query: 1147 SVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPIS 1206
               Q QQ  +  L   P   +Q     Q+     P    P    S  +QQ   QQQA   
Sbjct: 405  QQAQQQQQQHPVLHLQPQQIMQLQQQQQQQISQQPYPQQPPHPFSQQQQQ---QQQAHPH 461

Query: 1207 HIQTPMLS--QEQAQPPQQGLFQPQVALGSLPPNPMPQSQ----QGTMFQSQHSIVAMQS 1260
                  L   Q+Q  PPQQ L +PQ  L         Q Q    Q    Q Q      Q 
Sbjct: 462  QFSQQQLQFPQQQLHPPQQ-LHRPQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQ 520

Query: 1261 NSPSQEQQQQQQQQQQ------QQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNP 1314
            +S  Q+QQQQQ QQQQ      QQQQQQ     +   +  + A   Q PP       Q P
Sbjct: 521  HSLLQQQQQQQIQQQQLQRMHQQQQQQQMQSQTAPHLSQTSQALQHQVPP-------QQP 573

Query: 1315 MANQEQQNQSIFHQQSNM 1332
               Q+QQ      QQ  +
Sbjct: 574  PQQQQQQQPPPSPQQHQL 591



 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 73/293 (24%), Positives = 108/293 (36%), Gaps = 24/293 (8%)

Query: 1016 QIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGN--EMMSLQ 1073
            +++ ++      +Q S  ++       + +++ ++ N+   QQ N      +  + +S  
Sbjct: 307  EVRGNLMAAGQNLQSSERSEMIATWSPAVRTLRNITNNADIQQMNRPSNVAHILQTLSAP 366

Query: 1074 SGNFLQQSSHSQ-------AQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSS 1126
            + N  QQ +HSQ       A LF       +   L Q+ Q       +P++H Q      
Sbjct: 367  TKNLEQQVNHSQQGHTNANAVLFSQVKVTPETHMLQQQQQAQQQQQQHPVLHLQPQQIMQ 426

Query: 1127 EQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISP 1186
             Q Q     SQ      Q    P  QQ      +     + Q     Q+          P
Sbjct: 427  LQQQQQQQISQQPYP--QQPPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQLHRP 484

Query: 1187 LQSTSNSEQQAAFQQQAPISHIQTPMLSQEQ-AQPPQQGLF---QPQVALGSLPPNPMPQ 1242
             Q     +QQ A QQQ     +Q   L Q+Q AQ  QQ      Q Q  +       M Q
Sbjct: 485  QQQLQPFQQQHALQQQ--FHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQ 542

Query: 1243 SQQGTMFQSQ------HSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSN 1289
             QQ    QSQ       +  A+Q   P Q Q  QQQQQQQ     QQ  LF +
Sbjct: 543  QQQQQQMQSQTAPHLSQTSQALQHQVPPQ-QPPQQQQQQQPPPSPQQHQLFGH 594



 Score = 44.7 bits (104), Expect = 7e-04
 Identities = 116/579 (20%), Positives = 195/579 (33%), Gaps = 81/579 (13%)

Query: 675  ENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSDALLQQATQFQTRETQ 734
            ENE+Q   Q +    E  +   +Q+ S  G       S+   +   L+   +   + E Q
Sbjct: 202  ENEEQDS-QNEGSTDEKSSPASSQEGSPSGDQQFSPKSNTEKSKGELMFDDSSDSSPEKQ 260

Query: 735  SREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQ 794
             R +  +   V  L+       Q ++  L      +   +  NI P P     L    Q 
Sbjct: 261  ERNLNWTPAEVPQLAAAKRRLPQGKEPGLINLCANVPP-VPGNILP-PEVRGNLMAAGQN 318

Query: 795  LQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQEQLSA---DIFQQV 851
            LQ+   +   A+ S      V+ +            + P    ++ + LSA   ++ QQV
Sbjct: 319  LQSSERSEMIATWSPA----VRTLRNITNNADIQQMNRPSNVAHILQTLSAPTKNLEQQV 374

Query: 852  SQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQQQQQQQ---VME 908
            +  Q G             HT  + +L      V    E  +  QQQQ QQQQQ   V+ 
Sbjct: 375  NHSQQG-------------HTNANAVL---FSQVKVTPETHMLQQQQQAQQQQQQHPVLH 418

Query: 909  SSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQ 968
                 +M++QQ   Q   QI  + +P       + QQ    Q   H  S     + +Q  
Sbjct: 419  LQPQQIMQLQQ---QQQQQISQQPYPQQPPHPFSQQQQQQQQAHPHQFS----QQQLQFP 471

Query: 969  CELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQM 1028
             +    P             QQ+  P              +   Q  Q Q+++ Q   Q+
Sbjct: 472  QQQLHPP-------------QQLHRP--------------QQQLQPFQQQHALQQQFHQL 504

Query: 1029 QHSGDNQPQVNLFSSTKSMMSVQNSG--TQQQGNGLF-QQGNEMMSLQSGNFLQQSSHSQ 1085
            Q     Q Q+       S++  Q      QQQ   +  QQ  + M  Q+   L Q+S + 
Sbjct: 505  QQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQQQQMQSQTAPHLSQTSQAL 564

Query: 1086 AQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAVLQG 1145
                 PQ P    Q             P+P  H       + ++    F      A+   
Sbjct: 565  QHQVPPQQPPQQQQQQQP--------PPSPQQHQLFGHDPAVEIPEEGFLLGCVFAI--- 613

Query: 1146 SSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPI 1205
            +  P+      +  +   +      TV         + +   Q +S   Q    +++   
Sbjct: 614  ADYPEQMSDKQLLATWKRIIQAHGGTVDPTFTSRCTHLLCESQVSSAYAQAIRERKRCVT 673

Query: 1206 SHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQ 1244
            +H    +L +++  PP + L  P     + PP   P SQ
Sbjct: 674  AHWLNTVLKKKKMVPPHRALHFPV----AFPPGGKPCSQ 708


>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
          Length = 2063

 Score = 82.8 bits (203), Expect = 2e-15
 Identities = 201/972 (20%), Positives = 321/972 (33%), Gaps = 151/972 (15%)

Query: 649  QQTLENISNIAGNGSFSSPSSSHLPSENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPA 708
            Q  L N S  +   SF   S +  P+ N+ QQQ+ P+      L     Q +S PG  P 
Sbjct: 420  QPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPM 479

Query: 709  VSASSQLPNSDALLQQAT--------------------------------QFQTRETQSR 736
            V   +  PN   + QQ                                  Q Q   T + 
Sbjct: 480  VQQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTAT 539

Query: 737  EILQSDGTVVNLSQLTEASQQQQQSPLQEQAQT------LQQQISSNIFPSPNSVSQLQN 790
                S    +  +Q  + +  Q   P Q Q Q       + Q     I  + N+     +
Sbjct: 540  TPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTS 599

Query: 791  TIQQLQAGSFTGSTASGS-SGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQ 849
             + Q+   +  G    G  S  + + QQ++ +Q Q+         G  N Q  +     Q
Sbjct: 600  GVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQ-----QQGTLNPQNPMILSRAQ 654

Query: 850  QVSQIQSGVSPGMFS-STEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQQQQQQQVME 908
             + Q Q  V+P   +    P   T P  +L  +   +       +  Q Q   QQ  ++E
Sbjct: 655  LMPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIE 714

Query: 909  SSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMM--SALSTNEDMQ 966
                M  +MQ +  Q   Q QS + P  A     + + P      +M+  +   + + + 
Sbjct: 715  Q--IMTNQMQGNKQQFNTQNQSNVMPGPAQ----IMRGPTPNMQGNMVQFTGQMSGQMLP 768

Query: 967  MQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMV 1026
             Q  + +SP  V G +      Q +  PG +       GD   T      +  S     V
Sbjct: 769  QQGPVNNSPSQVMGIQG-----QVLRPPGPSPHMAQQHGDPATTANN--DVSLSQMMPDV 821

Query: 1027 QMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQQSSHSQA 1086
             +Q +    P V      ++M     SG    G+G+           +GN   Q S  Q 
Sbjct: 822  SIQQTNMVPPHV------QAMQGNSASGNHFSGHGMSFNA-PFSGAPNGN---QMSCGQ- 870

Query: 1087 QLFHPQNPIADAQNLSQETQGSLFHSPNPIVH-------SQTSTTSSEQMQPPMFHSQST 1139
               +P  P+     L+     +L  S     H       + T+    ++ +PP     S 
Sbjct: 871  ---NPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQ 927

Query: 1140 IAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAF 1199
                Q  + P  + +      Q P+   Q   +          S  P    S   +Q   
Sbjct: 928  ----QDLNTPDTRPAGLEEADQPPLPGEQGINLDNSGPKLPEFSNRPPGYPSQPVEQRPL 983

Query: 1200 QQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQ 1259
            QQ  P        L Q  A PPQ             PP   PQ Q           +  Q
Sbjct: 984  QQMPP-------QLMQHVAPPPQ-------------PPQQQPQPQ-----------LPQQ 1012

Query: 1260 SNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQE 1319
               P   Q Q QQQQQQQQQ     ++  +  ++    S    PP    NP+   M  Q+
Sbjct: 1013 QQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQ 1072

Query: 1320 QQNQSIFHQQSNMA--PMNQEQQ--------PMQFQSQSTV--SSLQNPGPTQSESSQTP 1367
              +  +       A  P + ++Q        P+   S+  V   S QNP  +      + 
Sbjct: 1073 SGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASL 1132

Query: 1368 LFHSSPQIQLVQGSPSSQEQQVTLFLS----------PASMSALQTSINQQDMQQSPLYS 1417
               S  +   V G P++    V L  +          P+ +SA Q +  QQ    S   S
Sbjct: 1133 PEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSS 1192

Query: 1418 PQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLT 1477
              ++ P +   T + +P+     +          N P S++ +       I  +  +L  
Sbjct: 1193 HGHHFPNVAAPTQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSE------ISLSPERLNA 1246

Query: 1478 SGPATLPDQLMAISQPGQP------QNEGQPPVTTLLSQQMPENSPLASSINTNQNIEKI 1531
            S     P Q+  I  P +P        +G  P T     Q P N  +  S        K+
Sbjct: 1247 SIAGLFPPQI-NIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKL 1305

Query: 1532 DLLVSLQNQGNN 1543
            D +V    + +N
Sbjct: 1306 DSVVVNSGKQSN 1317



 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 100/396 (25%), Positives = 143/396 (36%), Gaps = 79/396 (19%)

Query: 1183 SISPLQSTSNSEQQAAFQQQAPISHIQTPMLS----QEQAQPPQQGLFQPQVALGSLPPN 1238
            S S +    N E Q    + A  S    P+LS    Q+Q+ P            GSL P 
Sbjct: 191  SSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPS-----------GSLAPP 239

Query: 1239 PMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILF---------SN 1289
              P        Q   +          Q+QQQQQQQQQQQQQQQQQ +             
Sbjct: 240  HHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQP 299

Query: 1290 QNTMATMASPKQPPP----NMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQ 1345
            Q       +P Q P     N + +    P   Q        +Q    AP+    Q  Q Q
Sbjct: 300  QGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQ-QQLQ 358

Query: 1346 SQSTVSSLQNP---------GPTQSESSQT-------PLFHSSPQIQLVQGSPSS----- 1384
            ++ +++++Q P         G  Q+  + T       P   ++PQ++ +QG PS      
Sbjct: 359  ARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPL 418

Query: 1385 QEQQVTLFLSPASMSALQ-------TSINQQDMQQSPLYSPQNNMP-GIQGATSSPQPQA 1436
            Q+  +T     +S S+ Q        ++NQ   Q  P     N +P G Q   SSP    
Sbjct: 419  QQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNP 478

Query: 1437 TLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQP 1496
             +           +Q  P               N   Q L  G   +P +L      GQ 
Sbjct: 479  MVQQGNVPPNFMVMQQQP--------------PNQGPQSLHPGLGGMPKRLPPGFSAGQA 524

Query: 1497 Q---NEGQPPVTTLLSQQMPENSPLASSINTNQNIE 1529
                 +GQ P TT  +   P NS  A  +  NQN++
Sbjct: 525  NPNFMQGQVPSTTATT---PGNSG-APQLQANQNVQ 556



 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 195/887 (21%), Positives = 282/887 (31%), Gaps = 146/887 (16%)

Query: 747  NLSQLTEASQQQQQSPLQEQAQTLQQQISSNIFPSPNSVSQLQNT--------------- 791
            N  QL +  QQQQQ   Q+Q Q  QQQ        P    Q Q                 
Sbjct: 256  NFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVP 315

Query: 792  --IQQLQAGSFTGSTASGSSGSVDL------------VQQVLEAQQQLSSVLFSA----- 832
                QL +G+     A GS G++              +QQ L+A+  L++V   +     
Sbjct: 316  PGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPP 375

Query: 833  -PDGNENVQE------QLSAD---IFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRA 882
             P G++   +      Q+S        Q+  +Q G S       +P +  +     P   
Sbjct: 376  YPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSF 435

Query: 883  ESVHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSTASANGN 942
            +   P S  T+ NQ QQQ   +    +      +   S       +Q    P        
Sbjct: 436  QQGSPASSPTV-NQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMVQQGNVPPNFMV--- 491

Query: 943  LQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTS 1002
            +QQ P  Q    +   L       M   L   PP  S  + +     Q   P TT     
Sbjct: 492  MQQQPPNQGPQSLHPGLG-----GMPKRL---PPGFSAGQ-ANPNFMQGQVPSTTATTPG 542

Query: 1003 SSGDGEETGTQAKQIQNSVF----QTMVQMQHSGDNQPQVNLFSSTKSMMSVQ--NSGTQ 1056
            +SG  +    Q  Q          Q  +Q+ H   N  Q +L     +M + Q   SG  
Sbjct: 543  NSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSGVP 602

Query: 1057 QQG----NGLFQQG--NEMMSLQSGNFLQQSSHSQAQ-LFHPQNPIADAQNLSQETQGSL 1109
            Q       G  QQG  +++M +       Q    Q Q   +PQNP+          QG +
Sbjct: 603  QVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMI-LSRAQLMPQGQM 661

Query: 1110 FHSPNPIVHSQTSTTSSEQMQPP--MFHSQSTIAVLQGSSV--PQDQQSTNIFLSQSPM- 1164
              +P     SQ    S ++M PP  M   Q    +   + +  PQ Q    + L Q+PM 
Sbjct: 662  MVNP----PSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQ----VLLQQNPMI 713

Query: 1165 ----------NNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLS 1214
                      N  Q NT  Q      P  I  ++  + + Q    Q    +S    P   
Sbjct: 714  EQIMTNQMQGNKQQFNTQNQSNVMPGPAQI--MRGPTPNMQGNMVQFTGQMSGQMLPQQG 771

Query: 1215 QEQAQPPQQGLFQPQVALGSLPPNPMPQ--SQQGTMFQSQHSIVAMQSNSPSQEQQQQQQ 1272
                 P Q    Q QV     PP P P    Q G    + ++ V++    P    QQ   
Sbjct: 772  PVNNSPSQVMGIQGQVL---RPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNM 828

Query: 1273 QQQQQQQQQQQSIL---FSNQNTMATMASPKQPPPNMIFNPNQNP--------------M 1315
                 Q  Q  S     FS    M+  A     P     +  QNP              +
Sbjct: 829  VPPHVQAMQGNSASGNHFSGHG-MSFNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLL 887

Query: 1316 ANQEQQNQSIFH-----QQSNMAPMNQEQQPMQFQSQSTVSSLQNPG--PTQSESSQTPL 1368
             N  Q + S  H     +Q+N      +++    + +++   L  P   P   E +  P 
Sbjct: 888  VNLLQSDISAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPP 947

Query: 1369 FHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGA 1428
                  I L    P   E       S          + Q+ +QQ P    Q+  P  Q  
Sbjct: 948  LPGEQGINLDNSGPKLPE------FSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPP 1001

Query: 1429 TSSPQPQATLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTS-------GPA 1481
               PQPQ          +  Q Q      QQ   M +        +L  S       GP 
Sbjct: 1002 QQQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPL 1061

Query: 1482 TLPDQLMAISQPGQ-------PQNEGQPPVTTLLSQQMPENSPLASS 1521
                Q M + Q G              PP        MP N+PL S+
Sbjct: 1062 NPDSQRMPMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSN 1108



 Score = 58.5 bits (140), Expect = 5e-08
 Identities = 164/688 (23%), Positives = 231/688 (33%), Gaps = 126/688 (18%)

Query: 833  PDGNENVQEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENT 892
            P    +  + L + +  Q     SG         +P    R  N  P     +  Q +  
Sbjct: 210  PASQSDAMDPLLSGLHIQQQSHPSGSLAPPHHPMQPVSVNRQMN--PANFPQLQQQQQQQ 267

Query: 893  LSNQQQQQQQQQQVMES--SAAMVMEMQQSICQA-----AAQIQSELFPSTASANGNLQQ 945
               QQQQQQQQQQ  +    A    + QQ   Q       A  Q  + P          Q
Sbjct: 268  QQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQ 327

Query: 946  SPVYQQTSHMMSALSTNEDMQ-------MQCELFSSPPAVSGNETSTTT------TQQVA 992
             P  Q +   +  ++ N+  +       MQ +L + P   +    S         +QQ +
Sbjct: 328  PPPAQGS---LGTMTANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQAS 384

Query: 993  TPGTTMFQTSSSGDGEETGTQAKQIQN--SVFQTMVQMQHSGDNQP--QVNLFSSTKSMM 1048
               T   Q S+   G+ T  Q K +Q   S   T +Q  H  +  P    + F       
Sbjct: 385  QAHTNFPQMSN--PGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPAS 442

Query: 1049 SVQNSGTQQ-------QGNGLFQQGNEMMSLQSGNFLQQSSH--SQAQLFHPQNPIADAQ 1099
            S   + TQQ       Q N L Q   + +S    N + Q  +      +   Q P    Q
Sbjct: 443  SPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMVQQGNVPPNFMVMQQQPPNQGPQ 502

Query: 1100 NLSQETQGSLFHSP--------NP-----IVHSQTSTTSSEQMQPPMFHSQST-IAVLQG 1145
            +L     G     P        NP      V S T+TT      P +  +Q+   A  QG
Sbjct: 503  SLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTATTPGNSGAPQLQANQNVQHAGGQG 562

Query: 1146 SSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFF---AAPNSISPLQSTSNSEQQAAFQQQ 1202
            +  PQ+Q      +S  P N +Q + +          A  S  P  + SN + Q    QQ
Sbjct: 563  AGPPQNQMQ----VSHGPPNMMQPSLMGIHGNMNNQQAGTSGVPQVNLSNMQGQ---PQQ 615

Query: 1203 APISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNS 1262
             P S +   M   +Q  P Q  + Q Q  L   P NPM  S+   M Q Q     M  N 
Sbjct: 616  GPPSQL---MGMHQQIVPSQGQMVQQQGTLN--PQNPMILSRAQLMPQGQ-----MMVNP 665

Query: 1263 PSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQN 1322
            PSQ      Q+    +Q   Q         MA       P   ++    QNPM  Q   N
Sbjct: 666  PSQNLGPSPQRMTPPKQMLSQ----QGPQMMAPHNQMMGPQGQVLL--QQNPMIEQIMTN 719

Query: 1323 QSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSP 1382
            Q           M   +Q    Q+QS V     PGP Q     TP    + Q  +VQ + 
Sbjct: 720  Q-----------MQGNKQQFNTQNQSNVM----PGPAQIMRGPTP----NMQGNMVQFTG 760

Query: 1383 SSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGAT---SSPQPQATLF 1439
                Q +                     QQ P+ +  + + GIQG       P P     
Sbjct: 761  QMSGQMLP--------------------QQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQ 800

Query: 1440 H----NTAGGTMNQLQNSPGSSQQTSGM 1463
            H     TA   ++  Q  P  S Q + M
Sbjct: 801  HGDPATTANNDVSLSQMMPDVSIQQTNM 828


>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
          Length = 788

 Score = 79.7 bits (195), Expect = 2e-14
 Identities = 102/379 (26%), Positives = 143/379 (37%), Gaps = 45/379 (11%)

Query: 1179 AAPNSISPLQSTS--NSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLP 1236
            A P +   LQ  +    +QQ  FQQQ   +  Q     Q+Q    QQ   Q Q       
Sbjct: 147  ATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVVQQ 206

Query: 1237 PNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQ------------QQQQQQQQQQQQS 1284
               + Q QQ    Q QH I     N    +QQQQQ            QQQQQQQQQQQQ 
Sbjct: 207  QQQLQQQQQ----QQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQ 262

Query: 1285 ILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQF 1344
             L +            QPPP+         M + +        QQ  +A     Q P Q 
Sbjct: 263  ALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQS 322

Query: 1345 QSQSTVSSLQNPGPTQSESSQTPL-FHSSPQ-IQLVQGSPSSQEQQVTLFLSPAS----- 1397
            Q+Q  VS  Q   P Q   +Q PL F  +P  +Q     P  Q+QQ  +  + A+     
Sbjct: 323  QTQPLVSQAQ-ALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQQTAVQTAQAAQMVAP 381

Query: 1398 -MSALQTSINQQDMQQSPLYSPQNNMPGIQGAT--SSPQPQATLFHN--------TAGGT 1446
             +  +  ++ Q  M     + P   +  I  ++     QP A +  +        + G  
Sbjct: 382  GVQMITEALAQGGMHIRARFPPTTAVSAIPSSSIPLGRQPMAQVSQSSLPMLSSPSPGQQ 441

Query: 1447 MNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPGQPQNEGQPPVTT 1506
            +   Q+ P   Q +        Q N +  ++SGPA  P   +    P QP    Q PVT 
Sbjct: 442  VQTPQSMPPPPQPSPQPGQPSSQPNSN--VSSGPAPSPSSFLPSPSP-QP---SQSPVTA 495

Query: 1507 LLSQ--QMPENSPLASSIN 1523
               Q   +P   PL + +N
Sbjct: 496  RTPQNFSVPSPGPLNTPVN 514



 Score = 71.2 bits (173), Expect = 7e-12
 Identities = 100/423 (23%), Positives = 151/423 (35%), Gaps = 53/423 (12%)

Query: 975  PPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDN 1034
            PP  SG    +      ATP T +     +   ++   Q +Q Q +  Q   Q Q     
Sbjct: 130  PPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQ----- 184

Query: 1035 QPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSL-----QSGNFLQQSSH-----S 1084
              Q   F + +S M  Q     QQ   L QQ  +   L     Q+   +QQ        +
Sbjct: 185  --QQQQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIA 242

Query: 1085 QAQLFHPQNPIADAQNLSQET-------QGSLFHSPNPIVHSQTSTTSSEQM------QP 1131
            Q QL   Q      Q   Q+        Q      P P   SQ      +QM      QP
Sbjct: 243  QLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQP-PPSQALPQQLQQMHHTQHHQP 301

Query: 1132 PMFHSQSTIAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTS 1191
            P    Q  +A  Q S +P   Q+  +      +      T     F  AP  +       
Sbjct: 302  PPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQP 361

Query: 1192 NSEQQAAFQQQAPISHIQTP---MLSQEQAQPPQ--QGLFQPQVALGSLPPNPMPQSQQG 1246
              +QQ    Q A  + +  P   M+++  AQ     +  F P  A+ ++P + +P  +Q 
Sbjct: 362  QVQQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHIRARFPPTTAVSAIPSSSIPLGRQP 421

Query: 1247 TMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMA---SPKQPP 1303
                SQ S+  + S SP Q+ Q  Q      Q   Q     S  N+  +     SP    
Sbjct: 422  MAQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFL 481

Query: 1304 PNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNP-GPTQSE 1362
            P+    P+Q+P+  +  QN S+     +  P+N    P         SS+ +P G +Q+E
Sbjct: 482  PSPSPQPSQSPVTARTPQNFSV----PSPGPLNTPVNP---------SSVMSPAGSSQAE 528

Query: 1363 SSQ 1365
              Q
Sbjct: 529  EQQ 531



 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 93/389 (23%), Positives = 139/389 (35%), Gaps = 66/389 (16%)

Query: 1180 APNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNP 1239
            AP+S++ + ST+  + Q   QQ A     Q     Q+Q    QQ   Q Q          
Sbjct: 137  APHSMAVV-STATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQ--------QQ 187

Query: 1240 MPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQ---------QQQQQQQ------------Q 1278
              Q+QQ  M Q   ++V  Q     Q+QQQQ         QQQ QQQ            Q
Sbjct: 188  QFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQ 247

Query: 1279 QQQQQSILFSNQNTMATMASP--KQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMN 1336
            QQQQQ      Q   A  A P  +QPP   +  P   P     QQ Q + H Q +  P  
Sbjct: 248  QQQQQQQQQQQQQQQALQAQPPIQQPP---MQQPQPPPSQALPQQLQQMHHTQHHQPPPQ 304

Query: 1337 QEQQPMQFQSQSTVSSLQNPGPTQSESSQTP--LFHSSPQIQLVQGSPSSQEQQVTLFLS 1394
             +Q P+     S +       P  S++   P  + ++ P ++ V+     Q+  V     
Sbjct: 305  PQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPV----- 359

Query: 1395 PASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSPQPQATLFHNTAGGTMNQLQNSP 1454
                   Q  + QQ        + Q   PG+Q  T +   Q  +           +   P
Sbjct: 360  -------QPQVQQQQTAVQTAQAAQMVAPGVQMITEA-LAQGGMHIRARFPPTTAVSAIP 411

Query: 1455 GSSQQTSGMFLFGIQNNCSQLLTS--------GPATLPDQLMAISQPGQPQNEGQ----- 1501
             SS       +  +  +   +L+S         P ++P       QPGQP ++       
Sbjct: 412  SSSIPLGRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSS 471

Query: 1502 ---PPVTTLLSQQMPENSPLASSINTNQN 1527
               P  ++ L    P+ S    +  T QN
Sbjct: 472  GPAPSPSSFLPSPSPQPSQSPVTARTPQN 500



 Score = 61.6 bits (148), Expect = 6e-09
 Identities = 81/311 (26%), Positives = 111/311 (35%), Gaps = 53/311 (17%)

Query: 1221 PQQGLFQPQVALGSLPPNPMPQSQQG-----TMFQSQHSIVAMQSNSPS----------- 1264
            P +G  Q    +GSL     P S  G     T   + HS+  + + +P            
Sbjct: 102  PPRGPGQSLGGMGSLGAMGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQ 161

Query: 1265 QEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQS 1324
            Q+QQQQQ QQQQQ   QQQ      Q   A  ++ +Q    ++    Q     Q+QQ+  
Sbjct: 162  QQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLI 221

Query: 1325 IFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSS 1384
              H Q N   + Q+QQ +Q  +Q  +   Q     Q +  Q  L    P    +Q  P  
Sbjct: 222  KLHHQ-NQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPP----IQQPPMQ 276

Query: 1385 QEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGI-QGATSSPQPQATLFHNTA 1443
            Q Q       P    AL   + Q    Q     PQ   P + Q   S   PQ        
Sbjct: 277  QPQ-------PPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQ-------- 321

Query: 1444 GGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAISQPG-QPQ-NEGQ 1501
                +Q Q     +Q   G  L+          T  P       M + QP  QPQ  + Q
Sbjct: 322  ----SQTQPLVSQAQALPGQMLY----------TQPPLKFVRAPMVVQQPPVQPQVQQQQ 367

Query: 1502 PPVTTLLSQQM 1512
              V T  + QM
Sbjct: 368  TAVQTAQAAQM 378



 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 62/226 (27%), Positives = 84/226 (37%), Gaps = 7/226 (3%)

Query: 1211 PMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQ 1270
            PM    Q  P   G+    +A+ S          Q    Q Q      Q    +  QQQQ
Sbjct: 122  PMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQ 181

Query: 1271 QQQQQQQQQQQQQSILFSNQ---NTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFH 1327
            QQQQQQQ Q QQ ++    Q        +   +Q   ++I   +QN    Q+QQ Q    
Sbjct: 182  QQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQL--- 238

Query: 1328 QQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQI-QLVQGSPSSQE 1386
            Q+     + Q+QQ  Q Q Q    +LQ   P Q    Q P    S  + Q +Q    +Q 
Sbjct: 239  QRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQH 298

Query: 1387 QQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGATSSP 1432
             Q         ++  Q S      Q  PL S    +PG    T  P
Sbjct: 299  HQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPP 344



 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 80/357 (22%), Positives = 131/357 (36%), Gaps = 33/357 (9%)

Query: 679  QQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSDALLQQATQFQTRETQSREI 738
            QQQ Q + +  +    +Q Q   Q         S+      A++QQ  Q Q ++ Q + +
Sbjct: 161  QQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHL 220

Query: 739  LQSDGTVVNLSQLTEASQQQQ---QSPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQL 795
            ++      N  Q+ +  QQ Q   Q  LQ+Q Q  QQQ             Q Q  IQQ 
Sbjct: 221  IKLHHQ--NQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQ-----QQALQAQPPIQQ- 272

Query: 796  QAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQVSQIQ 855
                        S      +QQ+   Q          P   +N   QL      Q    Q
Sbjct: 273  --PPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQ 330

Query: 856  SGVSPGMFSSTEPTV-HTRPDNLLPGRAESVHPQSENTLSNQQQQQQQQQQVMESSAAMV 914
            +   PG    T+P +   R   ++  +   V PQ +     QQQ   Q  Q  +  A  V
Sbjct: 331  AQALPGQMLYTQPPLKFVRAPMVV--QQPPVQPQVQ-----QQQTAVQTAQAAQMVAPGV 383

Query: 915  MEMQQSICQAAAQIQSELFPSTASAN--------GNLQQSPVYQQTSHMMSALSTNEDMQ 966
              + +++ Q    I++   P+TA +         G    + V Q +  M+S+ S  + +Q
Sbjct: 384  QMITEALAQGGMHIRARFPPTTAVSAIPSSSIPLGRQPMAQVSQSSLPMLSSPSPGQQVQ 443

Query: 967  MQCELFSSP-PAVSGNETSTTTTQQVAT---PGTTMFQTSSSGDGEETGTQAKQIQN 1019
                +   P P+    + S+     V++   P  + F  S S    ++   A+  QN
Sbjct: 444  TPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQN 500



 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 64/268 (23%), Positives = 94/268 (35%), Gaps = 25/268 (9%)

Query: 707 PAVSASSQLPNSDALLQQATQFQTRETQSREILQSDGTVVNLSQLTEASQQQQQSPLQEQ 766
           P    S   P+S A++  AT     + Q   + Q         Q   A QQQQQ   Q+Q
Sbjct: 129 PPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQ 188

Query: 767 AQTLQQQISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLS 826
            Q  Q  +            QLQ   QQ Q                   QQ+ + QQQL 
Sbjct: 189 FQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQ---------QQIQQQQQQLQ 239

Query: 827 SVLFSAPDGNENVQEQLSADIFQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVH 886
            +        +  Q+Q      QQ  Q Q  +        +P     P   LP + + +H
Sbjct: 240 RIA-QLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPP----PSQALPQQLQQMH 294

Query: 887 PQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQS---ICQAAAQIQSELFPST----ASA 939
               +T  +Q   Q QQ  V ++  + +    Q+   + QA A     L+         A
Sbjct: 295 ----HTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRA 350

Query: 940 NGNLQQSPVYQQTSHMMSALSTNEDMQM 967
              +QQ PV  Q     +A+ T +  QM
Sbjct: 351 PMVVQQPPVQPQVQQQQTAVQTAQAAQM 378


>gi|221139761 zinc finger protein 853 [Homo sapiens]
          Length = 659

 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 100/400 (25%), Positives = 146/400 (36%), Gaps = 38/400 (9%)

Query: 1005 GDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQ-QGNGLF 1063
            G G +T +       S  +   Q ++S   +P V+       +      G ++ Q   L 
Sbjct: 36   GPGPDTLSGGSGGSESQEEEEPQERNSSPQRPAVSAPVGASEIAEETRPGQRELQLQQLE 95

Query: 1064 QQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNP----IVHS 1119
            QQ       Q     Q   H + Q    Q+       L QE   S+ H        ++H 
Sbjct: 96   QQPEPQQQPQHEQLQQPQPHLELQQQPQQDGQQQLSQLQQEKHQSVHHQELKPELQLMHQ 155

Query: 1120 QTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFA 1179
            Q      +Q+QP     Q  +   Q     Q  Q   +   Q     LQ     Q+    
Sbjct: 156  Q------QQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQE---QLQQQVQEQQLLQQ 206

Query: 1180 APNSISP---LQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLP 1236
                +     LQ     +QQ   QQQ  +   Q  +L Q+Q Q  QQ L Q Q  L    
Sbjct: 207  QQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQAQL---- 262

Query: 1237 PNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATM 1296
                   QQ  + Q Q     +Q     Q+Q+Q QQQQQQQ  QQQQ  L   Q     +
Sbjct: 263  -------QQQLLEQQQ---AQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPPL 312

Query: 1297 ASPKQPPPNMIFNP-NQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQN 1355
               ++    +   P +       EQQ Q +  QQ       QEQ+ +Q + Q  +  L+ 
Sbjct: 313  EPEEEEEVELELMPVDLGSEQELEQQRQELERQQE--LERQQEQRQLQLKLQEELQQLEQ 370

Query: 1356 PGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSP 1395
                Q E  Q  L     Q++L      +Q+Q+V L L+P
Sbjct: 371  ----QLEQQQQQLEQQEVQLELTPVELGAQQQEVQLELTP 406



 Score = 62.4 bits (150), Expect = 3e-09
 Identities = 73/274 (26%), Positives = 102/274 (37%), Gaps = 30/274 (10%)

Query: 1160 SQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQ 1219
            SQ      + N+  Q    +AP   S +   +   Q+    QQ      Q P   + Q Q
Sbjct: 51   SQEEEEPQERNSSPQRPAVSAPVGASEIAEETRPGQRELQLQQLE----QQP---EPQQQ 103

Query: 1220 PPQQGLFQPQVALGSLPPNPMPQSQQ--GTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQ 1277
            P  + L QPQ  L  L   P    QQ    + Q +H  V  Q   P + Q   QQQQ Q 
Sbjct: 104  PQHEQLQQPQPHL-ELQQQPQQDGQQQLSQLQQEKHQSVHHQELKP-ELQLMHQQQQLQP 161

Query: 1278 QQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQ----------QNQSIFH 1327
            QQ Q+Q  L   Q  + T  + +Q    ++    Q     QEQ          Q Q +  
Sbjct: 162  QQVQEQQRLQQQQEQLQTQQAQEQ---QVLQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQ 218

Query: 1328 QQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQI------QLVQGS 1381
            QQ  +     +QQ  Q Q Q  +  LQ  G  Q +  Q        Q+      QL Q  
Sbjct: 219  QQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQAQLQQQLLEQQQAQLQQQL 278

Query: 1382 PSSQEQQVTLFLSPASMSALQTSINQQDMQQSPL 1415
               Q++Q+        +   Q  + QQ +Q  PL
Sbjct: 279  LLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPPL 312



 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 64/270 (23%), Positives = 108/270 (40%), Gaps = 41/270 (15%)

Query: 675 ENEKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSDALLQQATQFQTRETQ 734
           + EK Q +  +   PE     Q Q + QP          Q+     L QQ  Q QT++ Q
Sbjct: 134 QQEKHQSVHHQELKPELQLMHQQQQL-QP---------QQVQEQQRLQQQQEQLQTQQAQ 183

Query: 735 SREILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQQ 794
            +++LQ    +    Q  +  QQQQ+   Q+Q    Q+Q+    F       Q Q  +  
Sbjct: 184 EQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQQQLLL 243

Query: 795 LQAGSFTGSTASGSSGSVDLVQQVLEAQQ-QLSSVLFSAPDGNENVQEQLSADIFQQVSQ 853
           LQ                 L QQ+L+ QQ QL   L         +Q+QL   + QQ  Q
Sbjct: 244 LQQQG-------------QLQQQLLQQQQAQLQQQLLEQQQA--QLQQQL---LLQQQEQ 285

Query: 854 IQSGVSPGMFSSTEPTV---HTRPDNLLPGRAESVHPQ-------SENTLSNQQQQQQQQ 903
           +Q      +    +  +     +P  L P   E V  +       SE  L  Q+Q+ ++Q
Sbjct: 286 LQQQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELMPVDLGSEQELEQQRQELERQ 345

Query: 904 QQV--MESSAAMVMEMQQSICQAAAQIQSE 931
           Q++   +    + +++Q+ + Q   Q++ +
Sbjct: 346 QELERQQEQRQLQLKLQEELQQLEQQLEQQ 375



 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 83/350 (23%), Positives = 114/350 (32%), Gaps = 32/350 (9%)

Query: 1075 GNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMF 1134
            G+  Q+    Q +   PQ P   A   + E           +   Q       Q QP   
Sbjct: 48   GSESQEEEEPQERNSSPQRPAVSAPVGASEIAEETRPGQRELQLQQLEQQPEPQQQPQHE 107

Query: 1135 HSQSTIAVLQGSSVPQ-DQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNS 1193
              Q     L+    PQ D Q     L Q    ++    +  E      +    LQ     
Sbjct: 108  QLQQPQPHLELQQQPQQDGQQQLSQLQQEKHQSVHHQELKPE--LQLMHQQQQLQPQQVQ 165

Query: 1194 EQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQH 1253
            EQQ   QQQ  +   Q    +QEQ    QQ   Q QV    L      Q QQ  + Q Q 
Sbjct: 166  EQQRLQQQQEQLQTQQ----AQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQE 221

Query: 1254 SIVAMQSNSPSQEQQQQQQ----------QQQ--QQQQQQQQSILFSNQNTMATMASPKQ 1301
             +   Q     ++ QQQQQ          QQQ  QQQQ Q Q  L   Q          Q
Sbjct: 222  QLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQ 281

Query: 1302 PPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGPTQS 1361
                      Q     Q+QQ Q +  QQ  +     +  P++ + +  V     P    S
Sbjct: 282  ----------QQEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELMPVDLGS 331

Query: 1362 ESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQDMQ 1411
            E     L     +++  Q     QEQ+         +  L+  + QQ  Q
Sbjct: 332  EQE---LEQQRQELERQQELERQQEQRQLQLKLQEELQQLEQQLEQQQQQ 378



 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 78/327 (23%), Positives = 118/327 (36%), Gaps = 60/327 (18%)

Query: 1000 QTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSM----MSVQNSGT 1055
            Q     DG++   Q  Q+Q    Q++    H  + +P++ L    + +    +  Q    
Sbjct: 119  QQQPQQDGQQ---QLSQLQQEKHQSV----HHQELKPELQLMHQQQQLQPQQVQEQQRLQ 171

Query: 1056 QQQGNGLFQQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSPNP 1115
            QQQ     QQ  E   LQ    LQQ    Q  L   Q  +   Q L Q+ Q         
Sbjct: 172  QQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQEQ--------- 222

Query: 1116 IVHSQTSTTSSEQMQPPMFHSQSTIAVLQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQE 1175
             +  Q      EQ+Q      Q  + +LQ     Q Q      L Q     LQ   + Q+
Sbjct: 223  -LQQQQFQQQQEQLQ-----QQQQLLLLQQQGQLQQQ------LLQQQQAQLQQQLLEQQ 270

Query: 1176 AFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVALGSL 1235
                   +    Q     ++Q   QQQ  +   Q   L Q+Q QPP     + +     L
Sbjct: 271  ------QAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELEL 324

Query: 1236 PPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQ------------QQQQQQQQQQQQQQ 1283
             P  +   Q+  + Q +  +   Q     QEQ+Q            +QQ +QQQQQ +QQ
Sbjct: 325  MPVDLGSEQE--LEQQRQELERQQELERQQEQRQLQLKLQEELQQLEQQLEQQQQQLEQQ 382

Query: 1284 SI--------LFSNQNTMATMASPKQP 1302
             +        L + Q  +    +P QP
Sbjct: 383  EVQLELTPVELGAQQQEVQLELTPVQP 409



 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 76/370 (20%), Positives = 124/370 (33%), Gaps = 48/370 (12%)

Query: 879  PGRAESVHPQSENTLSNQQQQQQQQQQVMESSAAMVMEMQQSICQAAAQIQSELFPSTAS 938
            PG+ E    Q E     QQQ Q +Q Q  +    +  + QQ   Q  +Q+Q E   S   
Sbjct: 84   PGQRELQLQQLEQQPEPQQQPQHEQLQQPQPHLELQQQPQQDGQQQLSQLQQEKHQSVHH 143

Query: 939  ANGNLQQSPVYQQTSHMMSALSTNEDMQMQCELFSSPPAVSGNETSTTTTQQVATPGTTM 998
                 +   ++QQ       +   + +Q Q E           +T     QQV       
Sbjct: 144  QELKPELQLMHQQQQLQPQQVQEQQRLQQQQEQL---------QTQQAQEQQVL------ 188

Query: 999  FQTSSSGDGEETGTQAKQIQNSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQ 1058
                          Q +Q+Q  V +  +  Q     Q Q  L    +    +Q    QQQ
Sbjct: 189  -------------QQQEQLQQQVQEQQLLQQQQEQLQQQQLL----QQQEQLQQQQFQQQ 231

Query: 1059 GNGLFQQGNEMMSLQSGN-----FLQQSSHSQAQLFHPQNPIADAQNLSQETQGSLFHSP 1113
               L QQ   ++  Q G        QQ +  Q QL   Q      Q L Q+ +       
Sbjct: 232  QEQLQQQQQLLLLQQQGQLQQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQ 291

Query: 1114 NPIVHSQTSTTSSEQMQPPMFHSQ-------STIAVLQGSSVPQDQQSTNIFLSQSPMNN 1166
              ++  Q      +Q+QPP    +         + V  GS    +QQ   +   Q     
Sbjct: 292  QQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELMPVDLGSEQELEQQRQELERQQ----E 347

Query: 1167 LQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLF 1226
            L+     ++        +  L+     +QQ   QQ+  +      + +Q+Q    +    
Sbjct: 348  LERQQEQRQLQLKLQEELQQLEQQLEQQQQQLEQQEVQLELTPVELGAQQQEVQLELTPV 407

Query: 1227 QPQVALGSLP 1236
            QP++ L  +P
Sbjct: 408  QPELQLELVP 417



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 70/303 (23%), Positives = 113/303 (37%), Gaps = 35/303 (11%)

Query: 677 EKQQQIQPKAYNPETLTTIQTQDISQPGTFPAVSASSQLPNSDALLQQATQFQTRETQSR 736
           +++ Q+Q     PE     Q + + QP   P +    Q P  D   QQ +Q Q  + QS 
Sbjct: 86  QRELQLQQLEQQPEPQQQPQHEQLQQPQ--PHLELQQQ-PQQDGQ-QQLSQLQQEKHQS- 140

Query: 737 EILQSDGTVVNLSQLTEASQQQQQSPLQEQAQTLQQQISSNIFPSPNSVSQLQNTIQ--- 793
                   V +     E     QQ  LQ Q    QQ++           +Q Q  +Q   
Sbjct: 141 --------VHHQELKPELQLMHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQE 192

Query: 794 QLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQVSQ 853
           QLQ               +   QQ+L+ Q+QL    F      E +Q+Q    + QQ  Q
Sbjct: 193 QLQQQVQEQQLLQQQQEQLQ-QQQLLQQQEQLQQQQFQ--QQQEQLQQQQQLLLLQQQGQ 249

Query: 854 IQSGVSPGMFSSTEPTVHTR-----PDNLLPGRAESVHPQSENTLSNQQQQQQQQQQVME 908
           +Q  +     +  +  +  +        LL  + E +  Q +  L  QQQ+Q QQQQ+  
Sbjct: 250 LQQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQP 309

Query: 909 SSAAMVMEMQQSICQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSALSTNEDMQMQ 968
                 +E ++       +++ EL P    +   L+Q    Q+           E  Q+Q
Sbjct: 310 PP----LEPEEE-----EEVELELMPVDLGSEQELEQQ--RQELERQQELERQQEQRQLQ 358

Query: 969 CEL 971
            +L
Sbjct: 359 LKL 361


>gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens]
          Length = 1420

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 200/959 (20%), Positives = 328/959 (34%), Gaps = 187/959 (19%)

Query: 624  VTPMEVTAEKRSSTIFKTTKSVGSTQQTLENISNIAGNGSFSSPSSSHLPSENE------ 677
            ++P    + K +S  F     V S   +  N     GN SFSS S S L + +E      
Sbjct: 482  ISPRNRGSPKIASHQFSPVAGVHSPMASSGN----TGNHSFSSSSLSALQAISEGVGTSL 537

Query: 678  --KQQQIQPKAYNPETLTTIQTQDIS-QPGTFPAVSASSQLPNSDALLQQATQFQTRETQ 734
                    PK  N   +   Q   +S Q    P      Q P   ++ Q  ++    + +
Sbjct: 538  LSTLSSPGPKLDNSPNMNITQPSKVSNQDSKSPLGFYCDQNPVESSMCQSNSRDHLSDKE 597

Query: 735  SREI-----------LQSDGTVVNLSQLTEASQQQ-----QQSPLQEQAQ------TLQQ 772
            S+E            L+S G    L  LT +S  +       SPL    +      T   
Sbjct: 598  SKESSVEGAENQRGPLESKGHKKLLQLLTCSSDDRGHSSLTNSPLDSSCKESSVSVTSPS 657

Query: 773  QISSNIFPSPNSVSQLQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSA 832
             +SS+     +S S +  ++ Q +         +G+S + ++ +   EA  + +S + S 
Sbjct: 658  GVSSSTSGGVSSTSNMHGSLLQEKHRILHKLLQNGNSPA-EVAKITAEATGKDTSSITSC 716

Query: 833  PDGNENVQEQLSAD-------------------------------IFQQVSQIQSGVSPG 861
             DGN   QEQLS                                 +  ++SQ  S   P 
Sbjct: 717  GDGNVVKQEQLSPKKKENNALLRYLLDRDDPSDALSKELQPQVEGVDNKMSQCTSSTIPS 776

Query: 862  MFSSTEPTVHTRPDNLLPGRAESVHPQS---------ENTLSNQQQQQQQQQQVMESSAA 912
                 +P + T       G  +++              N++S+       +QQV + + +
Sbjct: 777  SSQEKDPKIKTETSEEGSGDLDNLDAILGDLTSSDFYNNSISSNGSHLGTKQQVFQGTNS 836

Query: 913  MVMEMQQSI------CQAAAQIQSELFPSTASANGNLQQSPVYQQTSHMMSALSTNEDMQ 966
            + ++  QS+         A  + S +   ++    N+   P+  +       L  N  M 
Sbjct: 837  LGLKSSQSVQSIRPPYNRAVSLDSPVSVGSSPPVKNISAFPMLPK----QPMLGGNPRMM 892

Query: 967  MQCELFSSPPAVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNSVFQTMV 1026
               E + S     G      T  Q  + G      S +G  E   + +       + T +
Sbjct: 893  DSQENYGSS---MGGPNRNVTVTQTPSSGDWGLPNSKAGRMEPMNSNSMGRPGGDYNTSL 949

Query: 1027 QMQHSGDNQPQVNLFSST----------KSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGN 1076
                 G + P + L S++          +  M     G    G G    G    S Q G+
Sbjct: 950  PRPALGGSIPTLPLRSNSIPGARPVLQQQQQMLQMRPGEIPMGMGANPYGQAAASNQLGS 1009

Query: 1077 F------LQQSSHSQAQLFHPQNPIADA----QNLSQETQGSLFHSPNPIVHSQTSTTSS 1126
            +      ++Q SH        +N + D      NL  ++           + S T  T  
Sbjct: 1010 WPDGMLSMEQVSHGTQNRPLLRNSLDDLVGPPSNLEGQSDERALLDQLHTLLSNTDATGL 1069

Query: 1127 EQMQPPM------------------FHSQSTIAV------LQGSSVPQD---QQSTNIFL 1159
            E++   +                  F  Q    +      L G + P      Q      
Sbjct: 1070 EEIDRALGIPELVNQGQALEPKQDAFQGQEAAVMMDQKAGLYGQTYPAQGPPMQGGFHLQ 1129

Query: 1160 SQSPMNNLQTNTVAQEAFFAAPNS---ISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQE 1216
             QSP  N   N + Q+  F         + ++  +N+ +Q   Q Q     +Q      +
Sbjct: 1130 GQSPSFNSMMNQMNQQGNFPLQGMHPRANIMRPRTNTPKQLRMQLQ---QRLQGQQFLNQ 1186

Query: 1217 QAQPPQQGLFQPQVALGSLPPNPMPQSQQGTM----------------FQSQHSIVAMQS 1260
              Q  +  +  P  A G+    PM Q QQG +                F+ Q   + MQ 
Sbjct: 1187 SRQALELKMENP-TAGGAAVMRPMMQPQQGFLNAQMVAQRSRELLSHHFRQQRVAMMMQQ 1245

Query: 1261 NSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPM---AN 1317
                Q+QQQQQQQQQQQQQQQQQ      Q T A       PPPN+  +P+ + +     
Sbjct: 1246 QQQQQQQQQQQQQQQQQQQQQQQ----QQQQTQAF-----SPPPNVTASPSMDGLLAGPT 1296

Query: 1318 QEQQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNP--GPTQSESSQTPLFHSSPQI 1375
              Q     F  Q N   M Q+  P   +  S  +++ +   GP+Q+   Q P   S  Q 
Sbjct: 1297 MPQAPPQQFPYQPNYG-MGQQPDPAFGRVSSPPNAMMSSRMGPSQNPMMQHPQAASIYQS 1355

Query: 1376 QLVQGSPSS--------QEQQVTLFLSPASMSALQ---TSINQQDMQQSPLYSPQNNMP 1423
              ++G PS          +QQ     +PA  S +    +S +   M  +P+  P + MP
Sbjct: 1356 SEMKGWPSGNLARNSSFSQQQFAHQGNPAVYSMVHMNGSSGHMGQMNMNPM--PMSGMP 1412


>gi|62953127 polyhomeotic 1-like [Homo sapiens]
          Length = 1004

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 168/751 (22%), Positives = 277/751 (36%), Gaps = 104/751 (13%)

Query: 791  TIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQ 850
            T  +  + S  GS++SG S    + Q  L  +Q + ++   A     N  +     + QQ
Sbjct: 3    TESEQNSNSTNGSSSSGGSSRPQIAQMSLYERQAVQAL--QALQRQPNAAQYFHQFMLQQ 60

Query: 851  VSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQQQQQQQV--ME 908
              Q+ +     + +  + T+           A S    S NT + QQQ    Q  +    
Sbjct: 61   --QLSNAQLHSLAAVQQATI-----------AASRQASSPNTSTTQQQTTTTQASINLAT 107

Query: 909  SSAAMVMEMQQSICQAAAQI--QSELFPSTASANGNLQQSPVY--QQTSHMMSALST-NE 963
            +SAA ++   QS+   +A    QS L  +T S   N  Q+ +Y   Q  +++    T   
Sbjct: 108  TSAAQLISRSQSVSSPSATTLTQSVLLGNTTSPPLNQSQAQMYLRPQLGNLLQVNRTLGR 167

Query: 964  DMQMQCELFSSPP-AVSGNETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQNSVF 1022
            ++ +  +L   P  AV+  +    + Q            + +   ++   Q  Q+Q S  
Sbjct: 168  NVPLASQLILMPNGAVAAVQQEVPSAQSPGVHADADQVQNLAVRNQQASAQGPQMQGS-- 225

Query: 1023 QTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFLQQSS 1082
             T   +         ++  SS    ++  +SG   Q   L Q G       SGN +  S 
Sbjct: 226  -TQKAIPPGASPVSSLSQASSQALAVAQASSGATNQSLNLSQAGGG-----SGNSIPGS- 278

Query: 1083 HSQAQLFHPQNPIADAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMFHSQSTIAV 1142
                       P    Q       G L   P+  +   +       +  P+  +Q T+ V
Sbjct: 279  ---------MGPGGGGQ-----AHGGLGQLPSSGMGGGSCPRKGTGVVQPLPAAQ-TVTV 323

Query: 1143 LQGSSVPQDQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQ 1202
             QGS    +  +           + Q N        A P   +P Q+  +S      Q  
Sbjct: 324  SQGSQTEAESAAAK---KAEADGSGQQNVGMNLTRTATP---APSQTLISSATYTQIQPH 377

Query: 1203 APISHIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNS 1262
            + I   Q   L Q+Q       + Q Q+A+           QQ   FQ + S +   +  
Sbjct: 378  SLIQQQQQIHLQQKQV------VIQQQIAI---------HHQQ--QFQHRQSQLLHTATH 420

Query: 1263 PSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQN 1322
                QQQQQQQQQQQQQQQ Q+       T  T   P Q PP     P+Q+    Q    
Sbjct: 421  LQLAQQQQQQQQQQQQQQQPQA-------TTLTAPQPPQVPPTQQVPPSQSQQQAQTLVV 473

Query: 1323 QSIFHQQS-NMAPMNQEQQPMQFQSQSTVSSLQNP--GPTQSESSQTPLFHSSPQIQLVQ 1379
            Q +      ++ P    + P+  QS+  V+ ++ P  G  +  ++Q P  H   Q+   +
Sbjct: 474  QPMLQSSPLSLPPDAAPKPPIPIQSKPPVAPIKPPQLGAAKMSAAQQPPPHIPVQVVGTR 533

Query: 1380 GSPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYS--PQNNMPG-IQGATSSPQPQA 1436
               ++Q Q + L    A++   +         Q+ L S  P +  PG +Q    +  P  
Sbjct: 534  QPGTAQAQALGLAQLAAAVPTSRGMPGTVQSGQAHLASSPPSSQAPGALQECPPTLAPGM 593

Query: 1437 TL------FHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLMAI 1490
            TL       H   GG      +SP  +Q  +  ++  +       L   P TL  +  A 
Sbjct: 594  TLAPVQGTAHVVKGGATT---SSPVVAQVPAAFYMQSVH------LPGKPQTLAVKRKAD 644

Query: 1491 SQPGQPQNEGQPPVTTLLSQQMPENSPLASS 1521
            S+      E +  V+TL S    + SP+A S
Sbjct: 645  SE------EERDDVSTLGSMLPAKASPVAES 669



 Score = 39.7 bits (91), Expect = 0.023
 Identities = 87/371 (23%), Positives = 131/371 (35%), Gaps = 48/371 (12%)

Query: 625 TPMEVTAEKRSSTIFKTTKSVGSTQQTLENISNIAGNGSFSSPSS-------------SH 671
           +P+   ++  S  +     S G+T Q+L N+S   G    S P S               
Sbjct: 235 SPVSSLSQASSQALAVAQASSGATNQSL-NLSQAGGGSGNSIPGSMGPGGGGQAHGGLGQ 293

Query: 672 LPSENEKQQQIQPKAYNP-ETLTTIQTQDISQPGTFPAVSASSQLPNSDALLQQATQFQT 730
           LPS          K     + L   QT  +SQ     A SA+++   +D   QQ      
Sbjct: 294 LPSSGMGGGSCPRKGTGVVQPLPAAQTVTVSQGSQTEAESAAAKKAEADGSGQQNVGMNL 353

Query: 731 RETQSREILQSDGTVVNLSQLTEAS--QQQQQSPLQEQAQTLQQQISSNIFPS-PNSVSQ 787
             T +    Q+  +    +Q+   S  QQQQQ  LQ++   +QQQI+ +      +  SQ
Sbjct: 354 TRTATPAPSQTLISSATYTQIQPHSLIQQQQQIHLQQKQVVIQQQIAIHHQQQFQHRQSQ 413

Query: 788 LQNTIQQLQAGSFTGSTASGSSGSVDLVQQVLEAQQQLSSVLFSAPDGNENVQEQLSADI 847
           L +T   LQ                   QQ  + QQQ  +   +AP   + V        
Sbjct: 414 LLHTATHLQLAQ-----------QQQQQQQQQQQQQQPQATTLTAPQPPQ-VPPTQQVPP 461

Query: 848 FQQVSQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESVHPQSENTLSNQQQQQQQQQQVM 907
            Q   Q Q+ V        +P + + P +L P  A       +  +  Q +      +  
Sbjct: 462 SQSQQQAQTLV-------VQPMLQSSPLSLPPDAA------PKPPIPIQSKPPVAPIKPP 508

Query: 908 ESSAAMVMEMQQSICQAAAQIQSELFPSTASANG-NLQQSPVYQQTSHMMSALSTNEDMQ 966
           +  AA +   QQ       Q+     P TA A    L Q      TS  M     +    
Sbjct: 509 QLGAAKMSAAQQPPPHIPVQVVGTRQPGTAQAQALGLAQLAAAVPTSRGMPGTVQSG--- 565

Query: 967 MQCELFSSPPA 977
            Q  L SSPP+
Sbjct: 566 -QAHLASSPPS 575



 Score = 33.1 bits (74), Expect = 2.1
 Identities = 76/316 (24%), Positives = 127/316 (40%), Gaps = 70/316 (22%)

Query: 1241 PQSQQGTMFQSQ--HSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMAS 1298
            PQ  Q ++++ Q   ++ A+Q    + +   Q   QQQ    Q  S+    Q   AT+A+
Sbjct: 24   PQIAQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQQLSNAQLHSLAAVQQ---ATIAA 80

Query: 1299 PKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQSQSTVSSLQNPGP 1358
             +Q           +P  +  QQ  +      N+A  +  Q   + QS S+        P
Sbjct: 81   SRQA---------SSPNTSTTQQQTTTTQASINLATTSAAQLISRSQSVSS--------P 123

Query: 1359 TQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSP 1418
            + +  +Q+ L  ++        SP   + Q  ++L P   + LQ  +N+   +  PL S 
Sbjct: 124  SATTLTQSVLLGNTT-------SPPLNQSQAQMYLRPQLGNLLQ--VNRTLGRNVPLASQ 174

Query: 1419 QNNMPGIQGATSS-----PQPQATLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCS 1473
               MP   GA ++     P  Q+   H  A    +Q+QN    +QQ S            
Sbjct: 175  LILMP--NGAVAAVQQEVPSAQSPGVHADA----DQVQNLAVRNQQAS------------ 216

Query: 1474 QLLTSGPATLPDQLMAISQPGQPQNEGQPPVTTLLSQQMPENSPL--ASSINTNQNIEKI 1531
                 GP     Q+   +Q   P   G  PV++ LSQ   +   +  ASS  TNQ+   +
Sbjct: 217  ---AQGP-----QMQGSTQKAIP--PGASPVSS-LSQASSQALAVAQASSGATNQS---L 262

Query: 1532 DLLVSLQNQGNNLTGS 1547
            +L  +    GN++ GS
Sbjct: 263  NLSQAGGGSGNSIPGS 278


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 75.9 bits (185), Expect = 3e-13
 Identities = 92/330 (27%), Positives = 126/330 (38%), Gaps = 67/330 (20%)

Query: 1188 QSTSNSEQQAAFQQQAPIS--HIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQ 1245
            QS    +QQ  + QQ P    H Q     Q Q+QPPQ    QP     S  P+  P  Q 
Sbjct: 474  QSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPY---SQQPSQPPHQQS 530

Query: 1246 GTMFQSQHSIVAM--QSNSPSQEQQQQQQQQQQQQQQQQQSILF---------SNQNTMA 1294
               + SQ S      QS  P  + Q Q   QQQQ QQ   S L          S Q+   
Sbjct: 531  PAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQT 590

Query: 1295 TMASPKQPPPNMIFNPNQNPMAN-----------QEQQNQSIFHQQSNMA---------P 1334
              +  + PPP  +   +    A+           QE  N S+  + S++          P
Sbjct: 591  AYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLP 650

Query: 1335 MNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQG-------SPSSQEQ 1387
            M  E       S S +SS Q      ++S  +P  H+SP +  ++G       SP+S  Q
Sbjct: 651  MGTEGALSPGVSTSGISSSQGEQSNPAQSPFSP--HTSPHLPGIRGPSPSPVGSPASVAQ 708

Query: 1388 QVTLFLSPASM---------------SALQTSINQQDMQQSPLYSPQN-NMPGIQGATSS 1431
              +  LSPA++               S +  S+NQ  + Q   Y  +N  MP      SS
Sbjct: 709  SRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMP----QYSS 764

Query: 1432 PQPQATLFHNTAGGTMNQLQNSPGSSQQTS 1461
            PQP + L      G   Q+    GS QQ S
Sbjct: 765  PQPGSALSPRQPSG--GQIHTGMGSYQQNS 792



 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 91/382 (23%), Positives = 141/382 (36%), Gaps = 67/382 (17%)

Query: 1172 VAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVA 1231
            +A + + AA  + +   ++  ++Q++     AP+S   +    Q  A+ PQ     P   
Sbjct: 332  MASQCWGAAAAAAAAAAASGGAQQRS---HHAPMSPGSSGGGGQPLARTPQPS--SPMDQ 386

Query: 1232 LGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQ----QQQQQQQQQQQQQSILF 1287
            +G + P P      GT   SQ      Q   PS  QQ      Q    Q  Q+   ++  
Sbjct: 387  MGKMRPQPYG----GTNPYSQ------QQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQG 436

Query: 1288 SNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQ------SNMAPMNQEQQP 1341
              Q+ M  ++  +Q PP               QQ  S + QQ      +  +P  Q+QQP
Sbjct: 437  RAQSAMGGLSYTQQIPP-------------YGQQGPSGYGQQGQTPYYNQQSPHPQQQQP 483

Query: 1342 MQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSAL 1401
               Q   + +    P   Q   SQ       PQ+Q  Q   S Q  Q     SPA   + 
Sbjct: 484  PYSQQPPSQTPHAQPSYQQQPQSQ------PPQLQSSQPPYSQQPSQPPHQQSPAPYPSQ 537

Query: 1402 QTSINQQDMQQSPLYSPQNNMP------------GIQGATSSPQPQATLFHNTAGGTM-- 1447
            Q++  Q    Q P   PQ   P             +    + PQPQ+     TA      
Sbjct: 538  QSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRF 597

Query: 1448 ---NQLQNSPGSSQQTSGMFLF---GIQNNCSQLLTSGPATLPDQLMAISQ-PGQPQNEG 1500
                +L      SQ +S   +    G Q + +  L S P++LPD   +I   P   +   
Sbjct: 598  PPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGAL 657

Query: 1501 QPPVTT--LLSQQMPENSPLAS 1520
             P V+T  + S Q  +++P  S
Sbjct: 658  SPGVSTSGISSSQGEQSNPAQS 679



 Score = 44.3 bits (103), Expect = 0.001
 Identities = 77/349 (22%), Positives = 117/349 (33%), Gaps = 53/349 (15%)

Query: 1051 QNSGTQQQGNGLFQQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGSLF 1110
            Q+   QQQ     QQ          ++ QQ      QL   Q P +      Q +Q    
Sbjct: 474  QSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQ-----QPSQPPHQ 528

Query: 1111 HSPNPIVHSQTSTTSSEQMQPPMFHSQ---------------STIAVLQGSSVPQDQQST 1155
             SP P    Q++T    Q QPP    Q               ST++       PQ QQS 
Sbjct: 529  QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQ 588

Query: 1156 NIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQ 1215
                SQ      Q   ++Q++F +  +S   + S+   ++      Q+  S +     S 
Sbjct: 589  QTAYSQQRFPPPQ--ELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSI 646

Query: 1216 EQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHS---IVAMQSNSPSQEQQQQQQ 1272
            +      +G   P V+   +  +   QS       S H+   +  ++  SPS        
Sbjct: 647  DDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPS-------- 698

Query: 1273 QQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNM 1332
                       S+  S    ++  A P           NQ P      Q+ SI H   N 
Sbjct: 699  -----PVGSPASVAQSRSGPLSPAAVP----------GNQMPPRPPSGQSDSIMHPSMNQ 743

Query: 1333 APMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGS 1381
            + + Q++  MQ   Q    S   PG     S+ +P   S  QI    GS
Sbjct: 744  SSIAQDRGYMQRNPQMPQYSSPQPG-----SALSPRQPSGGQIHTGMGS 787



 Score = 43.9 bits (102), Expect = 0.001
 Identities = 121/535 (22%), Positives = 173/535 (32%), Gaps = 54/535 (10%)

Query: 793  QQLQAGSFTGSTASGSSGSVDLV-QQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQV 851
            QQ+      G +  G  G      QQ    QQQ        P    + Q         Q 
Sbjct: 449  QQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQP 508

Query: 852  SQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESV--HPQSENTLSNQQQQQQQQQQVMES 909
             Q+QS   P     ++P  H +     P +  +   HPQS+   S  Q Q   QQQ  + 
Sbjct: 509  PQLQSSQPPYSQQPSQPP-HQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQ 567

Query: 910  SAAMVMEMQQSICQAAAQIQSELFPSTASAN------GNLQQSPVYQQTS---HMMSALS 960
             A   +  Q     A  Q QS+    TA +         L Q     Q S    M S+  
Sbjct: 568  PAPSTLSQQ----AAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKG 623

Query: 961  TNEDMQMQCELF-SSPPAVSGN-ETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQ 1018
              EDM +  +   SS P +SG+ +     T+   +PG      S+SG     G Q+   Q
Sbjct: 624  GQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPG-----VSTSGISSSQGEQSNPAQ 678

Query: 1019 NSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFL 1078
             S F         G   P  +   S  S+   ++             GN+M         
Sbjct: 679  -SPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAA----VPGNQMPP------- 726

Query: 1079 QQSSHSQAQLFHP---QNPIA-DAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMF 1134
            +  S     + HP   Q+ IA D   + +  Q   + SP P         S  Q+   M 
Sbjct: 727  RPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMG 786

Query: 1135 HSQSTIAVLQGSSVPQ-DQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNS 1193
              Q       GS  PQ  Q        + P  N   N     A  A    I+P+ +    
Sbjct: 787  SYQQN---SMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMA--GGINPMGAGGQM 841

Query: 1194 EQQAAFQQQAPISHIQTPMLSQ-EQAQPPQQGLFQPQVALGSL-PPNPMPQSQQGTMFQS 1251
              Q        +   +    S   +   P      PQV  G   PP  M +  Q T    
Sbjct: 842  HGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAM 901

Query: 1252 QHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNM 1306
              +  ++Q+  P      Q           Q        N+MA M +P+ PP +M
Sbjct: 902  HVAANSIQNRPPGYPNMNQGGMMGTGPPYGQ------GINSMAGMINPQGPPYSM 950



 Score = 43.1 bits (100), Expect = 0.002
 Identities = 53/211 (25%), Positives = 74/211 (35%), Gaps = 43/211 (20%)

Query: 1230 VALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSN 1289
            ++ G+  PN MP +    M+            SPS+     QQQQQQQQ+       FS 
Sbjct: 1300 MSTGAPQPNLMPSNPDSGMY------------SPSR--YPPQQQQQQQQRHDSYGNQFST 1345

Query: 1290 QNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQSQST 1349
            Q T          P    F   Q  M  Q+QQN           PM+    P   + +  
Sbjct: 1346 QGT----------PSGSPFPSQQTTMYQQQQQNYK--------RPMDGTYGPPAKRHEGE 1387

Query: 1350 VSSL-QNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLF--LSPASMSALQTSIN 1406
            + S+  + G  Q +  Q P     P  Q     PS Q+     +    PA+ +A      
Sbjct: 1388 MYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAA----- 1442

Query: 1407 QQDMQQSPLYSPQNNMPGIQGATSSPQPQAT 1437
                ++ P   PQN  P   G      P  T
Sbjct: 1443 ---TERRPAGGPQNQFPFQFGRDRVSAPPGT 1470


>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
          Length = 2068

 Score = 75.9 bits (185), Expect = 3e-13
 Identities = 92/330 (27%), Positives = 126/330 (38%), Gaps = 67/330 (20%)

Query: 1188 QSTSNSEQQAAFQQQAPIS--HIQTPMLSQEQAQPPQQGLFQPQVALGSLPPNPMPQSQQ 1245
            QS    +QQ  + QQ P    H Q     Q Q+QPPQ    QP     S  P+  P  Q 
Sbjct: 474  QSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPY---SQQPSQPPHQQS 530

Query: 1246 GTMFQSQHSIVAM--QSNSPSQEQQQQQQQQQQQQQQQQQSILF---------SNQNTMA 1294
               + SQ S      QS  P  + Q Q   QQQQ QQ   S L          S Q+   
Sbjct: 531  PAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQT 590

Query: 1295 TMASPKQPPPNMIFNPNQNPMAN-----------QEQQNQSIFHQQSNMA---------P 1334
              +  + PPP  +   +    A+           QE  N S+  + S++          P
Sbjct: 591  AYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLP 650

Query: 1335 MNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQG-------SPSSQEQ 1387
            M  E       S S +SS Q      ++S  +P  H+SP +  ++G       SP+S  Q
Sbjct: 651  MGTEGALSPGVSTSGISSSQGEQSNPAQSPFSP--HTSPHLPGIRGPSPSPVGSPASVAQ 708

Query: 1388 QVTLFLSPASM---------------SALQTSINQQDMQQSPLYSPQN-NMPGIQGATSS 1431
              +  LSPA++               S +  S+NQ  + Q   Y  +N  MP      SS
Sbjct: 709  SRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMP----QYSS 764

Query: 1432 PQPQATLFHNTAGGTMNQLQNSPGSSQQTS 1461
            PQP + L      G   Q+    GS QQ S
Sbjct: 765  PQPGSALSPRQPSG--GQIHTGMGSYQQNS 792



 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 91/382 (23%), Positives = 141/382 (36%), Gaps = 67/382 (17%)

Query: 1172 VAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQEQAQPPQQGLFQPQVA 1231
            +A + + AA  + +   ++  ++Q++     AP+S   +    Q  A+ PQ     P   
Sbjct: 332  MASQCWGAAAAAAAAAAASGGAQQRS---HHAPMSPGSSGGGGQPLARTPQPS--SPMDQ 386

Query: 1232 LGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQ----QQQQQQQQQQQQQSILF 1287
            +G + P P      GT   SQ      Q   PS  QQ      Q    Q  Q+   ++  
Sbjct: 387  MGKMRPQPYG----GTNPYSQ------QQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQG 436

Query: 1288 SNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQ------SNMAPMNQEQQP 1341
              Q+ M  ++  +Q PP               QQ  S + QQ      +  +P  Q+QQP
Sbjct: 437  RAQSAMGGLSYTQQIPP-------------YGQQGPSGYGQQGQTPYYNQQSPHPQQQQP 483

Query: 1342 MQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGSPSSQEQQVTLFLSPASMSAL 1401
               Q   + +    P   Q   SQ       PQ+Q  Q   S Q  Q     SPA   + 
Sbjct: 484  PYSQQPPSQTPHAQPSYQQQPQSQ------PPQLQSSQPPYSQQPSQPPHQQSPAPYPSQ 537

Query: 1402 QTSINQQDMQQSPLYSPQNNMP------------GIQGATSSPQPQATLFHNTAGGTM-- 1447
            Q++  Q    Q P   PQ   P             +    + PQPQ+     TA      
Sbjct: 538  QSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRF 597

Query: 1448 ---NQLQNSPGSSQQTSGMFLF---GIQNNCSQLLTSGPATLPDQLMAISQ-PGQPQNEG 1500
                +L      SQ +S   +    G Q + +  L S P++LPD   +I   P   +   
Sbjct: 598  PPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGAL 657

Query: 1501 QPPVTT--LLSQQMPENSPLAS 1520
             P V+T  + S Q  +++P  S
Sbjct: 658  SPGVSTSGISSSQGEQSNPAQS 679



 Score = 44.3 bits (103), Expect = 0.001
 Identities = 77/349 (22%), Positives = 117/349 (33%), Gaps = 53/349 (15%)

Query: 1051 QNSGTQQQGNGLFQQGNEMMSLQSGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGSLF 1110
            Q+   QQQ     QQ          ++ QQ      QL   Q P +      Q +Q    
Sbjct: 474  QSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQ-----QPSQPPHQ 528

Query: 1111 HSPNPIVHSQTSTTSSEQMQPPMFHSQ---------------STIAVLQGSSVPQDQQST 1155
             SP P    Q++T    Q QPP    Q               ST++       PQ QQS 
Sbjct: 529  QSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQ 588

Query: 1156 NIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNSEQQAAFQQQAPISHIQTPMLSQ 1215
                SQ      Q   ++Q++F +  +S   + S+   ++      Q+  S +     S 
Sbjct: 589  QTAYSQQRFPPPQ--ELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSI 646

Query: 1216 EQAQPPQQGLFQPQVALGSLPPNPMPQSQQGTMFQSQHS---IVAMQSNSPSQEQQQQQQ 1272
            +      +G   P V+   +  +   QS       S H+   +  ++  SPS        
Sbjct: 647  DDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPS-------- 698

Query: 1273 QQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNM 1332
                       S+  S    ++  A P           NQ P      Q+ SI H   N 
Sbjct: 699  -----PVGSPASVAQSRSGPLSPAAVP----------GNQMPPRPPSGQSDSIMHPSMNQ 743

Query: 1333 APMNQEQQPMQFQSQSTVSSLQNPGPTQSESSQTPLFHSSPQIQLVQGS 1381
            + + Q++  MQ   Q    S   PG     S+ +P   S  QI    GS
Sbjct: 744  SSIAQDRGYMQRNPQMPQYSSPQPG-----SALSPRQPSGGQIHTGMGS 787



 Score = 43.9 bits (102), Expect = 0.001
 Identities = 121/535 (22%), Positives = 173/535 (32%), Gaps = 54/535 (10%)

Query: 793  QQLQAGSFTGSTASGSSGSVDLV-QQVLEAQQQLSSVLFSAPDGNENVQEQLSADIFQQV 851
            QQ+      G +  G  G      QQ    QQQ        P    + Q         Q 
Sbjct: 449  QQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQP 508

Query: 852  SQIQSGVSPGMFSSTEPTVHTRPDNLLPGRAESV--HPQSENTLSNQQQQQQQQQQVMES 909
             Q+QS   P     ++P  H +     P +  +   HPQS+   S  Q Q   QQQ  + 
Sbjct: 509  PQLQSSQPPYSQQPSQPP-HQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQ 567

Query: 910  SAAMVMEMQQSICQAAAQIQSELFPSTASAN------GNLQQSPVYQQTS---HMMSALS 960
             A   +  Q     A  Q QS+    TA +         L Q     Q S    M S+  
Sbjct: 568  PAPSTLSQQ----AAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKG 623

Query: 961  TNEDMQMQCELF-SSPPAVSGN-ETSTTTTQQVATPGTTMFQTSSSGDGEETGTQAKQIQ 1018
              EDM +  +   SS P +SG+ +     T+   +PG      S+SG     G Q+   Q
Sbjct: 624  GQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPG-----VSTSGISSSQGEQSNPAQ 678

Query: 1019 NSVFQTMVQMQHSGDNQPQVNLFSSTKSMMSVQNSGTQQQGNGLFQQGNEMMSLQSGNFL 1078
             S F         G   P  +   S  S+   ++             GN+M         
Sbjct: 679  -SPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAA----VPGNQMPP------- 726

Query: 1079 QQSSHSQAQLFHP---QNPIA-DAQNLSQETQGSLFHSPNPIVHSQTSTTSSEQMQPPMF 1134
            +  S     + HP   Q+ IA D   + +  Q   + SP P         S  Q+   M 
Sbjct: 727  RPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMG 786

Query: 1135 HSQSTIAVLQGSSVPQ-DQQSTNIFLSQSPMNNLQTNTVAQEAFFAAPNSISPLQSTSNS 1193
              Q       GS  PQ  Q        + P  N   N     A  A    I+P+ +    
Sbjct: 787  SYQQN---SMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMA--GGINPMGAGGQM 841

Query: 1194 EQQAAFQQQAPISHIQTPMLSQ-EQAQPPQQGLFQPQVALGSL-PPNPMPQSQQGTMFQS 1251
              Q        +   +    S   +   P      PQV  G   PP  M +  Q T    
Sbjct: 842  HGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAM 901

Query: 1252 QHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNM 1306
              +  ++Q+  P      Q           Q        N+MA M +P+ PP +M
Sbjct: 902  HVAANSIQNRPPGYPNMNQGGMMGTGPPYGQ------GINSMAGMINPQGPPYSM 950



 Score = 35.8 bits (81), Expect = 0.33
 Identities = 39/147 (26%), Positives = 51/147 (34%), Gaps = 27/147 (18%)

Query: 1230 VALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSN 1289
            ++ G+  PN MP +    M+            SPS+     QQQQQQQQ+       FS 
Sbjct: 1300 MSTGAPQPNLMPSNPDSGMY------------SPSR--YPPQQQQQQQQRHDSYGNQFST 1345

Query: 1290 QNTMATMASPKQPPPNMIFNPNQNPMANQEQQNQSIFHQQSNMAPMNQEQQPMQFQSQST 1349
            Q T          P    F   Q  M  Q+QQ  S         PM     P +     +
Sbjct: 1346 QGT----------PSGSPFPSQQTTMYQQQQQVSS---PAPLPRPMENRTSPSKSPFLHS 1392

Query: 1350 VSSLQNPGPTQSESSQTPLFHSSPQIQ 1376
               +Q  GP    S   P     P I+
Sbjct: 1393 GMKMQKAGPPVPASHIAPAPVQPPMIR 1419


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.307    0.121    0.332 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,274,539
Number of Sequences: 37866
Number of extensions: 2989208
Number of successful extensions: 29731
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 538
Number of HSP's that attempted gapping in prelim test: 14215
Number of HSP's gapped (non-prelim): 6104
length of query: 1548
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1433
effective length of database: 13,892,928
effective search space: 19908565824
effective search space used: 19908565824
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 69 (31.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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