Guide to the Human Genome
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Name: GRIA4 Sequence: fasta or formatted (433aa) NCBI GI: 164419739
Description:

glutamate receptor, ionotrophic, AMPA 4 isoform 3 precursor

Referenced in:

Glutamate

Other entries for this name:
alt mRNA [433aa] glutamate receptor, ionotrophic, AMPA 4 isoform 3 precursor
alt prot [902aa] glutamate receptor, ionotrophic, AMPA 4 isoform 1 precursor
alt prot [884aa] glutamate receptor, ionotrophic, AMPA 4 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         25           2
 C cysteine            1.4          6           1
 D aspartate           5.3         23           1
 E glutamate           4.8         21           2
 F phenylalanine       5.8         25           1
 G glycine             6.9         30           2
 H histidine           2.3         10           1
 I isoleucine          6.9         30           2
 K lysine              3.9         17           2
 L leucine             9.7         42           2
 M methionine          2.5         11           1
 N asparagine          5.5         24           1
 P proline             3.9         17           2
 Q glutamine           4.6         20           1
 R arginine            6.5         28           2
 S serine              6.2         27           2
 T threonine           5.8         25           2
 V valine              7.2         31           3
 W tryptophan          1.4          6           1
 Y tyrosine            3.5         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamate receptor, ionotrophic, AMPA 4 isoform 3 p... 
GRIA4                 1.000   glutamate receptor, ionotrophic, AMPA 4 isoform 3 p...
GRIA4                 0.977   glutamate receptor, ionotrophic, AMPA 4 isoform 2 p...
GRIA4                 0.977   glutamate receptor, ionotrophic, AMPA 4 isoform 1 p...
GRIA3                 0.612   glutamate receptor, ionotrophic, AMPA 3 isoform 2 p...
GRIA3                 0.612   glutamate receptor, ionotrophic, AMPA 3 isoform 1 p...
GRIA2                 0.574   glutamate receptor, ionotropic, AMPA 2 isoform 2 pr...
GRIA2                 0.574   glutamate receptor, ionotropic, AMPA 2 isoform 1 pre...
GRIA2                 0.531   glutamate receptor, ionotropic, AMPA 2 isoform 3 [H...
GRIA1                 0.504   glutamate receptor, ionotropic, AMPA 1 isoform 2 [H...
GRIA1                 0.504   glutamate receptor, ionotropic, AMPA 1 isoform 1 [H...
GRIK3                 0.148   glutamate receptor, ionotropic, kainate 3 precursor ...
GRIK1                 0.141   glutamate receptor, ionotropic, kainate 1 isoform 2 ...
GRIK1                 0.130   glutamate receptor, ionotropic, kainate 1 isoform 1 p...
GRIK2                 0.129   glutamate receptor, ionotropic, kainate 2 isoform 1 ...
GRIK2                 0.129   glutamate receptor, ionotropic, kainate 2 isoform 2 ...
GRIK5                 0.072   glutamate receptor KA2 precursor 
GRID2                 0.070   glutamate receptor, ionotropic, delta 2 
GRIK4                 0.060   glutamate receptor KA1 precursor 
GRID1                 0.052   glutamate receptor, ionotropic, delta 1 precursor [H...
GRIN2B                0.013   N-methyl-D-aspartate receptor subunit 2B precursor ...
TAS1R2                0.005   taste receptor, type 1, member 2 
KIAA0317              0.005   hypothetical protein LOC9870 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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