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Search of human proteins with 160707905
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|160707905 similar to solute carrier family 35, member E2
[Homo sapiens]
(405 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|160707905 similar to solute carrier family 35, member E2 [Hom... 787 0.0
gi|33469137 solute carrier family 35, member E2 [Homo sapiens] 388 e-108
gi|164607128 solute carrier family 35, member E1 [Homo sapiens] 124 1e-28
gi|56699411 solute carrier family 35, member E2 [Homo sapiens] 84 2e-16
gi|47827222 solute carrier family 35, member E4 [Homo sapiens] 75 8e-14
gi|27881499 solute carrier family 35, member C2 isoform a [Homo ... 69 1e-11
gi|21314776 solute carrier family 35, member C2 isoform a [Homo ... 69 1e-11
gi|223029426 solute carrier family 35, member D2 [Homo sapiens] 55 1e-07
gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens] 53 6e-07
gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens] 53 6e-07
gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens] 53 6e-07
gi|27881496 solute carrier family 35, member C2 isoform b [Homo ... 52 1e-06
gi|5453621 solute carrier family 35 (CMP-sialic acid transporter... 45 9e-05
gi|5032213 solute carrier family 35, member B1 [Homo sapiens] 35 0.093
gi|14249528 solute carrier family 35, member B4 [Homo sapiens] 35 0.12
gi|109948265 solute carrier family 35, member A2 isoform c [Homo... 35 0.16
gi|5032211 solute carrier family 35, member A2 isoform a [Homo s... 35 0.16
gi|187761334 hypothetical protein LOC57828 [Homo sapiens] 31 1.8
gi|4503391 dopamine receptor D5 [Homo sapiens] 31 1.8
gi|145580590 hepatitis C virus F protein-binding protein 2 [Homo... 31 1.8
gi|62632750 ATPase, class VI, type 11B [Homo sapiens] 30 3.9
gi|187828564 BEN domain containing 5 [Homo sapiens] 30 5.1
gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens] 30 5.1
gi|23397492 transmembrane protein 20 isoform 2 [Homo sapiens] 30 5.1
>gi|160707905 similar to solute carrier family 35, member E2 [Homo
sapiens]
Length = 405
Score = 787 bits (2033), Expect = 0.0
Identities = 405/405 (100%), Positives = 405/405 (100%)
Query: 1 MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITE 60
MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITE
Sbjct: 1 MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITE 60
Query: 61 TTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGC 120
TTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGC
Sbjct: 61 TTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGC 120
Query: 121 VKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP 180
VKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP
Sbjct: 121 VKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP 180
Query: 181 IFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNV 240
IFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNV
Sbjct: 181 IFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNV 240
Query: 241 FSKKLLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLL 300
FSKKLLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLL
Sbjct: 241 FSKKLLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLL 300
Query: 301 LTDGVLFHLQSVTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALV 360
LTDGVLFHLQSVTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALV
Sbjct: 301 LTDGVLFHLQSVTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALV 360
Query: 361 TVGVLLYNKARQHQQEALQSLAAATGRAPDDTVEPLLPQDPRQHP 405
TVGVLLYNKARQHQQEALQSLAAATGRAPDDTVEPLLPQDPRQHP
Sbjct: 361 TVGVLLYNKARQHQQEALQSLAAATGRAPDDTVEPLLPQDPRQHP 405
>gi|33469137 solute carrier family 35, member E2 [Homo sapiens]
Length = 266
Score = 388 bits (997), Expect = e-108
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITE 60
MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITE
Sbjct: 1 MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITE 60
Query: 61 TTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGC 120
TTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGC
Sbjct: 61 TTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGC 120
Query: 121 VKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP 180
VKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP
Sbjct: 121 VKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP 180
Query: 181 IFTVIMSRMILGEYTG 196
IFTVIMSRMILGEYTG
Sbjct: 181 IFTVIMSRMILGEYTG 196
>gi|164607128 solute carrier family 35, member E1 [Homo sapiens]
Length = 410
Score = 124 bits (312), Expect = 1e-28
Identities = 84/250 (33%), Positives = 134/250 (53%), Gaps = 5/250 (2%)
Query: 139 PPNFLMT-MLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGL 197
PP F +L + ++ V VS+ V VS+A TVK++ PI+ V++SR+I+ E
Sbjct: 104 PPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQST 163
Query: 198 LVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPE 257
V LSLIP++ G+ L T TE+SF++ G +AL+ + LQN+FSKK+L R
Sbjct: 164 KVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDS--RIHHLR 221
Query: 258 LQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLLL-TDGVLFHLQSVTAYA 316
L AV ++P V + S ++ Y LLLL G Q+V A++
Sbjct: 222 LLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFS 281
Query: 317 LMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALVTVGVLLYNKAR-QHQQ 375
++ +SP+++SVA+ K + I +S+I+ N +TS + +G +GV LYNK + Q
Sbjct: 282 ILNLVSPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQ 341
Query: 376 EALQSLAAAT 385
+A + L T
Sbjct: 342 QARKHLLPVT 351
>gi|56699411 solute carrier family 35, member E2 [Homo sapiens]
Length = 313
Score = 84.3 bits (207), Expect = 2e-16
Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 18/317 (5%)
Query: 69 GVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGCVKTLVPCC 128
G W A L L S C +FLNK+I + G P+M + T +G L C
Sbjct: 10 GHWRIAAGLLFNL--LVSICIVFLNKWIY-VYHGFPNMSLTLVHFVVTWLG----LYICQ 62
Query: 129 LYQHKARLSYPPN--FLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIM 186
A S PP+ L+ + F G + F + SL+N + + K+ + +
Sbjct: 63 KLDIFAPKSLPPSRLLLLALSFCGFVVFTNL-----SLQNNTIGTYQLAKAMTTPVIIAI 117
Query: 187 SRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNVFSKKLL 246
+ + L+LIP+ G+ L + ++ FN LG A ++ L V+
Sbjct: 118 QTFCYQKTFSTRIQLTLIPITLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQVWVGA-- 175
Query: 247 SGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLLLTDGVL 306
+ + ++ +L +Y + + AML+ A FF PV G G ++ +L++L GV+
Sbjct: 176 KQHELQVNSMQLLYYQAPMSSAMLLVAVPFFE--PVFGEGGIFGPWSVSALLMVLLSGVI 233
Query: 307 FHLQSVTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALVTVGVLL 366
+ +++ Y ++G SPVT+++ K ++++ ++F + ++ A+G G+L
Sbjct: 234 AFMVNLSIYWIIGNTSPVTYNMFGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGILA 293
Query: 367 YNKARQHQQEALQSLAA 383
Y + +QE +S A
Sbjct: 294 YTHFKLSEQEGSRSKLA 310
>gi|47827222 solute carrier family 35, member E4 [Homo sapiens]
Length = 350
Score = 75.5 bits (184), Expect = 8e-14
Identities = 78/315 (24%), Positives = 138/315 (43%), Gaps = 23/315 (7%)
Query: 73 SRALLYLTLWFFFSFCTLFLNKYILSLLG-GEPSMLGAVQMLSTTVIGCVKTLVPCCLYQ 131
+R + +W LNK+I ++ G G P +L A+ ML + C
Sbjct: 47 ARVAMAALVWLLAGASMSSLNKWIFTVHGFGRPLLLSALHML-VAALAC----------H 95
Query: 132 HKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMIL 191
AR P +L + L ++ G V L+ V + A+ V ++ P+FT+ +S ++L
Sbjct: 96 RGARRPMPGGTRCRVLLLSLTFGTSMACGNVGLRAVPLDLAQLVTTTTPLFTLALSALLL 155
Query: 192 GEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNVFSKKLLSGDKY 251
G L ++ P+ G A A E G L+ + L++V LL +
Sbjct: 156 GRRHHPLQLAAMGPLCLGAACSLAGEFRTPPTGCGFLLAATCLRGLKSVQQSALLQEE-- 213
Query: 252 RFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLLLTDGVLFHLQS 311
R A L + TS + +L A + V G + + + + +L +L L +
Sbjct: 214 RLDAVTLLYATSLPSFCLLAGAAL----VLEAGVAPPPTAGDSRLWACILLSCLLSVLYN 269
Query: 312 VTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALVTVGVLLYNKAR 371
+ +++L+ S +T V + ++ LS ++FG+++++LS VG AL G+ LY
Sbjct: 270 LASFSLLALTSALTVHVLGNLTVVGNLILSRLLFGSRLSALSYVGIALTLSGMFLY---- 325
Query: 372 QHQQEALQSLAAATG 386
H E + S AA G
Sbjct: 326 -HNCEFVASWAARRG 339
>gi|27881499 solute carrier family 35, member C2 isoform a [Homo
sapiens]
Length = 365
Score = 68.6 bits (166), Expect = 1e-11
Identities = 93/356 (26%), Positives = 148/356 (41%), Gaps = 39/356 (10%)
Query: 70 VWSSRALLYLTLWFF-FSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVI----GCVKTL 124
+W + L L L ++ FS F NK++ M ML VI + L
Sbjct: 11 LWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMT----MLHLAVIFLFSALSRAL 66
Query: 125 VPCCLYQHKARLSYP-------PNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKS 177
V C ++ + LS+ P L T L VGL + S V VS KS
Sbjct: 67 VQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNW--------SFLYVTVSLYTMTKS 118
Query: 178 SAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCL 237
SA +F +I S + E + L ++ + GGL + T FNV GF+ L + + +
Sbjct: 119 SAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGI 178
Query: 238 QNVFSKKLLSGDKYRFSAP-ELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDV 296
+ ++ LL + P + F+ L P F + + S K F + QD
Sbjct: 179 RWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLH-LSTSEKIFRF-QDT 236
Query: 297 VLLLLTDGVLFHLQSVTAYA-------LMGKISPVTFSVASTVKHALSIWLSVIVFGNKI 349
LLL G LF L + A+ L+ + S +T S+A K ++ L+ + G++I
Sbjct: 237 GLLLRVLGSLF-LGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQI 295
Query: 350 TSLSAVGTALVTVGVLLY--NKARQHQQEALQSLAAATGRAPDDTVEPLLPQDPRQ 403
+ L+ +G AL G+ L+ KA + + G +PD +E LL R+
Sbjct: 296 SLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPD--LELLLRSSQRE 349
>gi|21314776 solute carrier family 35, member C2 isoform a [Homo
sapiens]
Length = 365
Score = 68.6 bits (166), Expect = 1e-11
Identities = 93/356 (26%), Positives = 148/356 (41%), Gaps = 39/356 (10%)
Query: 70 VWSSRALLYLTLWFF-FSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVI----GCVKTL 124
+W + L L L ++ FS F NK++ M ML VI + L
Sbjct: 11 LWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMT----MLHLAVIFLFSALSRAL 66
Query: 125 VPCCLYQHKARLSYP-------PNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKS 177
V C ++ + LS+ P L T L VGL + S V VS KS
Sbjct: 67 VQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNW--------SFLYVTVSLYTMTKS 118
Query: 178 SAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCL 237
SA +F +I S + E + L ++ + GGL + T FNV GF+ L + + +
Sbjct: 119 SAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGI 178
Query: 238 QNVFSKKLLSGDKYRFSAP-ELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDV 296
+ ++ LL + P + F+ L P F + + S K F + QD
Sbjct: 179 RWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLH-LSTSEKIFRF-QDT 236
Query: 297 VLLLLTDGVLFHLQSVTAYA-------LMGKISPVTFSVASTVKHALSIWLSVIVFGNKI 349
LLL G LF L + A+ L+ + S +T S+A K ++ L+ + G++I
Sbjct: 237 GLLLRVLGSLF-LGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQI 295
Query: 350 TSLSAVGTALVTVGVLLY--NKARQHQQEALQSLAAATGRAPDDTVEPLLPQDPRQ 403
+ L+ +G AL G+ L+ KA + + G +PD +E LL R+
Sbjct: 296 SLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPD--LELLLRSSQRE 349
>gi|223029426 solute carrier family 35, member D2 [Homo sapiens]
Length = 337
Score = 54.7 bits (130), Expect = 1e-07
Identities = 66/302 (21%), Positives = 130/302 (43%), Gaps = 17/302 (5%)
Query: 73 SRALLYLTLWFF--FSFCTLFLNKYILSLLG-GEPSMLGAVQMLSTTVIGCVKTLVPCCL 129
SR L+ F+ SF + +NK +L+ G P LG QM +T +I V L
Sbjct: 23 SRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIH 82
Query: 130 YQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRM 189
+ + F + +L+VG + GL S +++ ++ T+++ +
Sbjct: 83 FPDFDKKIPVKLFPLPLLYVG-----NHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETI 137
Query: 190 ILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNVFSKKLLSGD 249
ILG+ L + LS+ ++ G + ++++FN+ G+ +I V++K+ + D
Sbjct: 138 ILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKM--D 195
Query: 250 KYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLL--LTDGVLF 307
+ FY A M++P + + + F+ ++VV +L L L
Sbjct: 196 PKELGKYGVLFYN---ACFMIIPTLIISVSTGDL-QQATEFNQWKNVVFILQFLLSCFLG 251
Query: 308 HLQSVTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITS-LSAVGTALVTVGVLL 366
L + S +T +V +K+ ++ +++ G+ I S L+ VG + G L
Sbjct: 252 FLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLR 311
Query: 367 YN 368
Y+
Sbjct: 312 YS 313
>gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens]
Length = 364
Score = 52.8 bits (125), Expect = 6e-07
Identities = 72/315 (22%), Positives = 133/315 (42%), Gaps = 36/315 (11%)
Query: 77 LYLTLWFFFSFCTLFLNKYIL---SLLGGEPSMLGAVQMLSTTVIGC--VKTLVPCCLYQ 131
L ++L++ S +FLNKY+L SL P + Q L TT++ C + L CC
Sbjct: 43 LVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLL-CKGLSALAACC--- 98
Query: 132 HKARLSYPPNFLMTMLFVGLMRFATVVLGLVS-----LKNVAVSFAETVKSSAPIFTVIM 186
+ +P L + ++ + V +G+++ LK V V+F +S +F V++
Sbjct: 99 -PGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLL 157
Query: 187 SRMILGEYTGLLVNLSLIPVMGGLALCT---ATEISFNVLGFSAALSTNIMDCLQNVFSK 243
S ++L + T L+ ++GG L E + + LG + ++ L +++
Sbjct: 158 SYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTT 217
Query: 244 KLL---SGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVI---GRSGKSFSYNQDVV 297
K+L G +R L FY + A + +P + ++ + + G + +
Sbjct: 218 KVLPAVDGSIWR-----LTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWG---- 268
Query: 298 LLLLTDGVLFHLQSVTAYALMGKI-SPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVG 356
++T G LF L K SP+T +V+ T K L+V+ + + L
Sbjct: 269 --MMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTS 326
Query: 357 TALVTVGVLLYNKAR 371
+V G Y R
Sbjct: 327 NMMVLGGSSAYTWVR 341
>gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens]
Length = 351
Score = 52.8 bits (125), Expect = 6e-07
Identities = 72/315 (22%), Positives = 133/315 (42%), Gaps = 36/315 (11%)
Query: 77 LYLTLWFFFSFCTLFLNKYIL---SLLGGEPSMLGAVQMLSTTVIGC--VKTLVPCCLYQ 131
L ++L++ S +FLNKY+L SL P + Q L TT++ C + L CC
Sbjct: 30 LVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLL-CKGLSALAACC--- 85
Query: 132 HKARLSYPPNFLMTMLFVGLMRFATVVLGLVS-----LKNVAVSFAETVKSSAPIFTVIM 186
+ +P L + ++ + V +G+++ LK V V+F +S +F V++
Sbjct: 86 -PGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLL 144
Query: 187 SRMILGEYTGLLVNLSLIPVMGGLALCT---ATEISFNVLGFSAALSTNIMDCLQNVFSK 243
S ++L + T L+ ++GG L E + + LG + ++ L +++
Sbjct: 145 SYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTT 204
Query: 244 KLL---SGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVI---GRSGKSFSYNQDVV 297
K+L G +R L FY + A + +P + ++ + + G + +
Sbjct: 205 KVLPAVDGSIWR-----LTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWG---- 255
Query: 298 LLLLTDGVLFHLQSVTAYALMGKI-SPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVG 356
++T G LF L K SP+T +V+ T K L+V+ + + L
Sbjct: 256 --MMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTS 313
Query: 357 TALVTVGVLLYNKAR 371
+V G Y R
Sbjct: 314 NMMVLGGSSAYTWVR 328
>gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens]
Length = 351
Score = 52.8 bits (125), Expect = 6e-07
Identities = 72/315 (22%), Positives = 133/315 (42%), Gaps = 36/315 (11%)
Query: 77 LYLTLWFFFSFCTLFLNKYIL---SLLGGEPSMLGAVQMLSTTVIGC--VKTLVPCCLYQ 131
L ++L++ S +FLNKY+L SL P + Q L TT++ C + L CC
Sbjct: 30 LVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLL-CKGLSALAACC--- 85
Query: 132 HKARLSYPPNFLMTMLFVGLMRFATVVLGLVS-----LKNVAVSFAETVKSSAPIFTVIM 186
+ +P L + ++ + V +G+++ LK V V+F +S +F V++
Sbjct: 86 -PGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLL 144
Query: 187 SRMILGEYTGLLVNLSLIPVMGGLALCT---ATEISFNVLGFSAALSTNIMDCLQNVFSK 243
S ++L + T L+ ++GG L E + + LG + ++ L +++
Sbjct: 145 SYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTT 204
Query: 244 KLL---SGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVI---GRSGKSFSYNQDVV 297
K+L G +R L FY + A + +P + ++ + + G + +
Sbjct: 205 KVLPAVDGSIWR-----LTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWG---- 255
Query: 298 LLLLTDGVLFHLQSVTAYALMGKI-SPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVG 356
++T G LF L K SP+T +V+ T K L+V+ + + L
Sbjct: 256 --MMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTS 313
Query: 357 TALVTVGVLLYNKAR 371
+V G Y R
Sbjct: 314 NMMVLGGSSAYTWVR 328
>gi|27881496 solute carrier family 35, member C2 isoform b [Homo
sapiens]
Length = 344
Score = 51.6 bits (122), Expect = 1e-06
Identities = 89/356 (25%), Positives = 140/356 (39%), Gaps = 60/356 (16%)
Query: 70 VWSSRALLYLTLWFF-FSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVI----GCVKTL 124
+W + L L L ++ FS F NK++ M ML VI + L
Sbjct: 11 LWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMT----MLHLAVIFLFSALSRAL 66
Query: 125 VPCCLYQHKARLSYP-------PNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKS 177
V C ++ + LS+ P L T L VGL + S V VS KS
Sbjct: 67 VQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNW--------SFLYVTVSLYTMTKS 118
Query: 178 SAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCL 237
SA +F +I S L+ L + FNV GF+ L + + +
Sbjct: 119 SAVLFILIFS---------LIFKLEELSTQ------------FNVEGFALVLGASFIGGI 157
Query: 238 QNVFSKKLLSGDKYRFSAP-ELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDV 296
+ ++ LL + P + F+ L P F + + S K F + QD
Sbjct: 158 RWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLH-LSTSEKIFRF-QDT 215
Query: 297 VLLLLTDGVLFHLQSVTAYAL-------MGKISPVTFSVASTVKHALSIWLSVIVFGNKI 349
LLL G LF L + A+ L + + S +T S+A K ++ L+ + G++I
Sbjct: 216 GLLLRVLGSLF-LGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQI 274
Query: 350 TSLSAVGTALVTVGVLLY--NKARQHQQEALQSLAAATGRAPDDTVEPLLPQDPRQ 403
+ L+ +G AL G+ L+ KA + + G +PD +E LL R+
Sbjct: 275 SLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPD--LELLLRSSQRE 328
>gi|5453621 solute carrier family 35 (CMP-sialic acid transporter),
member A1 [Homo sapiens]
Length = 337
Score = 45.4 bits (106), Expect = 9e-05
Identities = 49/170 (28%), Positives = 71/170 (41%), Gaps = 15/170 (8%)
Query: 222 VLGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVP 281
+LGF A + V+ +K+L +Q Y S V + A V+ +D
Sbjct: 175 LLGFGAIAIAVLCSGFAGVYFEKVLKSSDTSLWVRNIQMYLSGIIVTL---AGVYLSDGA 231
Query: 282 VIGRSGKSFSYNQDV--VLLLLTDGVLFHLQSV--TAYALMGKISPVTFSVASTVKHALS 337
I G + Y V V+ L + G L+ V T + G FS A+ + LS
Sbjct: 232 EIKEKGFFYGYTYYVWFVIFLASVGGLYTSVVVKYTDNIMKG------FSAAAAI--VLS 283
Query: 338 IWLSVIVFGNKITSLSAVGTALVTVGVLLYNKARQHQQEALQSLAAATGR 387
SV++FG +IT A+GT LV V + LY RQ Q A+ R
Sbjct: 284 TIASVMLFGLQITLTFALGTLLVCVSIYLYGLPRQDTTSIQQGETASKER 333
>gi|5032213 solute carrier family 35, member B1 [Homo sapiens]
Length = 322
Score = 35.4 bits (80), Expect = 0.093
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 323 PVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALVTVGV 364
P+T S+ +T + +I SVI+F N I+ + VGT LV +G+
Sbjct: 266 PLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLVFLGL 307
>gi|14249528 solute carrier family 35, member B4 [Homo sapiens]
Length = 331
Score = 35.0 bits (79), Expect = 0.12
Identities = 52/253 (20%), Positives = 99/253 (39%), Gaps = 35/253 (13%)
Query: 143 LMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLS 202
++TM F +VV N+A+ +S + I +I+ +IL + + S
Sbjct: 69 MVTMFFT-----VSVVNNYALNLNIAMPLHMIFRSGSLIANMILGIIILKKRYSIFKYTS 123
Query: 203 LIPVMGGLALCT---------ATEISFN---------VLGFSAALSTNIMDCLQNVFSKK 244
+ V G+ +CT + +S N +LG A +M +F +
Sbjct: 124 IALVSVGIFICTFMSAKQVTSQSSLSENDGFQAFVWWLLGIGALTFALLMSARMGIFQET 183
Query: 245 LLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLLLTDG 304
L ++ + E FY A + V D V+ KS Y V+ + L
Sbjct: 184 LYK--RFGKHSKEALFYNHALPLPGFVFLASDIYDHAVL--FNKSELYEIPVIGVTLPIM 239
Query: 305 VLFHLQSVTA--------YALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVG 356
+ L ++ + L + + +T ++ T++ +S+ S++ F N T +G
Sbjct: 240 WFYLLMNIITQYVCIRGVFILTTECASLTVTLVVTLRKFVSLIFSILYFQNPFTLWHWLG 299
Query: 357 TALVTVGVLLYNK 369
T V +G L+Y +
Sbjct: 300 TLFVFIGTLMYTE 312
>gi|109948265 solute carrier family 35, member A2 isoform c [Homo
sapiens]
Length = 393
Score = 34.7 bits (78), Expect = 0.16
Identities = 54/255 (21%), Positives = 100/255 (39%), Gaps = 26/255 (10%)
Query: 159 LGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEI 218
L V++ N+ + + + T + S ++L L SL+ + G+A+ A +
Sbjct: 128 LQYVAISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQA 187
Query: 219 SFNV---------LGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVAM 269
G +A +++ + V+ +K+L G LQ A+ +
Sbjct: 188 GGGGPRPLDQNPGAGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGL 247
Query: 270 LVPARVFFTDVPVIGRSGKSFSYNQ---DVVLLLLTDGVLFHLQSVTAYALMGKISPVTF 326
+ +++ + + G F Y VVL G+L + V YA +
Sbjct: 248 V---GLWWAEGTAVATRGFFFGYTPAVWGVVLNQAFGGLLVAV--VVKYA-----DNILK 297
Query: 327 SVASTVKHALSIWLSVIVFGNKITSLSAVGTALVTVGVLLYNKARQHQQEALQSLAAATG 386
A+++ LS S+ +FG + L A+G LV V LY+ R A +++A+A+
Sbjct: 298 GFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYLYSLPR----GAAKAIASASA 353
Query: 387 RAPDDTVEPLLPQDP 401
A V P P
Sbjct: 354 SASGPCVHQQPPGQP 368
>gi|5032211 solute carrier family 35, member A2 isoform a [Homo
sapiens]
Length = 396
Score = 34.7 bits (78), Expect = 0.16
Identities = 54/255 (21%), Positives = 100/255 (39%), Gaps = 26/255 (10%)
Query: 159 LGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEI 218
L V++ N+ + + + T + S ++L L SL+ + G+A+ A +
Sbjct: 128 LQYVAISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQA 187
Query: 219 SFNV---------LGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVAM 269
G +A +++ + V+ +K+L G LQ A+ +
Sbjct: 188 GGGGPRPLDQNPGAGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGL 247
Query: 270 LVPARVFFTDVPVIGRSGKSFSYNQ---DVVLLLLTDGVLFHLQSVTAYALMGKISPVTF 326
+ +++ + + G F Y VVL G+L + V YA +
Sbjct: 248 V---GLWWAEGTAVATRGFFFGYTPAVWGVVLNQAFGGLLVAV--VVKYA-----DNILK 297
Query: 327 SVASTVKHALSIWLSVIVFGNKITSLSAVGTALVTVGVLLYNKARQHQQEALQSLAAATG 386
A+++ LS S+ +FG + L A+G LV V LY+ R A +++A+A+
Sbjct: 298 GFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYLYSLPR----GAAKAIASASA 353
Query: 387 RAPDDTVEPLLPQDP 401
A V P P
Sbjct: 354 SASGPCVHQQPPGQP 368
>gi|187761334 hypothetical protein LOC57828 [Homo sapiens]
Length = 1159
Score = 31.2 bits (69), Expect = 1.8
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 19/145 (13%)
Query: 55 TVTITETTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLS 114
T TI +T ES L + ++ + Y T ++ TL+ G+ +
Sbjct: 294 TATIYDTIATESTLFIRQNQLVYYFT----GTYTTLYERNR------------GSGSWIR 337
Query: 115 TTVIGCVKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAET 174
C+K L P +Y H Y L T G + F T+ G VS + + ++
Sbjct: 338 VLASECIKKLCP--VYFHSNGSEYIMA-LTTGKHEGYVHFGTIRDGQVSFEMLPRQWSVC 394
Query: 175 VKSSAPIFTVIMSRMILGEYTGLLV 199
+ ++I S I GEYT LL+
Sbjct: 395 EQIGVTTCSIIWSEYIAGEYTLLLL 419
>gi|4503391 dopamine receptor D5 [Homo sapiens]
Length = 477
Score = 31.2 bits (69), Expect = 1.8
Identities = 46/196 (23%), Positives = 73/196 (37%), Gaps = 32/196 (16%)
Query: 138 YPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGL 197
Y P +M + + + R A V + +S A A++ +SSA R + + T +
Sbjct: 235 YIPVAIMIVTYTRIYRIAQVQIRRISSLERAAEHAQSCRSSAACAPDTSLRASIKKETKV 294
Query: 198 LVNLSLIPVMGGLALCTATEISFNVL-------------GFSAALSTNIMDCLQNVFSKK 244
L LS+I MG C N + GF T + ++
Sbjct: 295 LKTLSVI--MGVFVCCWLPFFILNCMVPFCSGHPEGPPAGFPCVSETTFDVFVWFGWANS 352
Query: 245 LLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPV--IGRSGKSFSYNQDVVLLLLT 302
L+ Y F+A + + A L+ F + PV + S + SYNQD+V
Sbjct: 353 SLNPVIYAFNADFQKVF------AQLLGCSHFCSRTPVETVNISNELISYNQDIV----- 401
Query: 303 DGVLFHLQSVTAYALM 318
FH + AY M
Sbjct: 402 ----FHKEIAAAYIHM 413
>gi|145580590 hepatitis C virus F protein-binding protein 2 [Homo
sapiens]
Length = 938
Score = 31.2 bits (69), Expect = 1.8
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 224 GFSAALSTNIMDCLQNVF--SKKLLSGDKYRFSAPELQFYTSAAAVAMLVPARV-FFTDV 280
GF LS N+ D + SK L SG + FS E FY +A+L + + F
Sbjct: 86 GFGFLLSLNLSDMGHKIGTKSKDLPSGPEKHFSWKECLFYIIILVLALLETSLLHHFAGF 145
Query: 281 PVIGRSGKSFSYNQDVVLLLLTDGVLFHLQSV 312
I +S +++LL+ +L +QSV
Sbjct: 146 SQISKSNSQAIVGYGLMILLIILWILREIQSV 177
>gi|62632750 ATPase, class VI, type 11B [Homo sapiens]
Length = 1177
Score = 30.0 bits (66), Expect = 3.9
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 53 VLTVTITETTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQM 112
V+ +T+T +E+ W + + + ++ F+F F +LF + LG + +Q+
Sbjct: 1008 VMVITVTVKMALETHFWTWINHLVTWGSIIFYFVF-SLFYGGILWPFLGSQNMYFVFIQL 1066
Query: 113 LST-TVIGCVKTLVPCCLY 130
LS+ + + +V CL+
Sbjct: 1067 LSSGSAWFAIILMVVTCLF 1085
>gi|187828564 BEN domain containing 5 [Homo sapiens]
Length = 421
Score = 29.6 bits (65), Expect = 5.1
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 11 EELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVL 54
EEL G E P R+P WG+L H+++ + A+ + +V+
Sbjct: 45 EELGAGPESPP--RAPRDWGALLLHKAQILALAEDKSDLENSVM 86
>gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens]
Length = 365
Score = 29.6 bits (65), Expect = 5.1
Identities = 23/111 (20%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 83 FFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGCVKTLVPCCLYQHKARLSYPPNF 142
F FS +LF+ K + AV++ + + + ++PC +Y+ K P
Sbjct: 80 FLFSVGSLFVKKV---------QDVHAVEISAFRCVFQMLVVIPCLIYR-KTGFIGPKGQ 129
Query: 143 LMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGE 193
+ ++ G++ ++L + + ++++ A + S+P+FT I + + L E
Sbjct: 130 RIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKE 180
>gi|23397492 transmembrane protein 20 isoform 2 [Homo sapiens]
Length = 364
Score = 29.6 bits (65), Expect = 5.1
Identities = 23/111 (20%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 83 FFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGCVKTLVPCCLYQHKARLSYPPNF 142
F FS +LF+ K + AV++ + + + ++PC +Y+ K P
Sbjct: 79 FLFSVGSLFVKKV---------QDVHAVEISAFRCVFQMLVVIPCLIYR-KTGFIGPKGQ 128
Query: 143 LMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGE 193
+ ++ G++ ++L + + ++++ A + S+P+FT I + + L E
Sbjct: 129 RIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKE 179
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,623,158
Number of Sequences: 37866
Number of extensions: 527064
Number of successful extensions: 1313
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1287
Number of HSP's gapped (non-prelim): 26
length of query: 405
length of database: 18,247,518
effective HSP length: 105
effective length of query: 300
effective length of database: 14,271,588
effective search space: 4281476400
effective search space used: 4281476400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.