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Search of human proteins with 158635944
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|158635944 solute carrier family 23 (nucleobase
transporters), member 3 isoform 1 [Homo sapiens]
(493 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|158635944 solute carrier family 23 (nucleobase transporters),... 1010 0.0
gi|222080105 solute carrier family 23 (nucleobase transporters),... 462 e-130
gi|222080107 solute carrier family 23 (nucleobase transporters),... 459 e-129
gi|44680148 solute carrier family 23 (nucleobase transporters), ... 106 4e-23
gi|40316845 solute carrier family 23 (nucleobase transporters), ... 106 4e-23
gi|44680145 solute carrier family 23 (nucleobase transporters), ... 104 2e-22
gi|44680143 solute carrier family 23 (nucleobase transporters), ... 99 9e-21
gi|148664218 POU transcription factor [Homo sapiens] 33 0.45
gi|90652859 protein-tyrosine-phosphatase non-receptor 5 isoform ... 33 0.59
gi|90652853 protein-tyrosine-phosphatase non-receptor 5 isoform ... 33 0.59
gi|28872814 semaphorin 4G [Homo sapiens] 33 0.59
gi|157676340 zinc finger protein 142 [Homo sapiens] 33 0.77
gi|48375173 microtubule-associated protein 6 isoform 1 [Homo sap... 33 0.77
gi|144922631 tigger transposable element derived 5 [Homo sapiens] 32 1.0
gi|52218828 olfactory receptor, family 1, subfamily M, member 1 ... 32 1.0
gi|52353302 transmembrane protein 198 [Homo sapiens] 32 1.0
gi|239751047 PREDICTED: hypothetical protein isoform 3 [Homo sap... 32 1.3
gi|239751045 PREDICTED: hypothetical protein isoform 2 [Homo sap... 32 1.3
gi|239751043 PREDICTED: hypothetical protein isoform 1 [Homo sap... 32 1.3
gi|239745488 PREDICTED: hypothetical protein XP_002343476 isofor... 32 1.3
gi|239745486 PREDICTED: hypothetical protein XP_002343475 isofor... 32 1.3
gi|239745484 PREDICTED: hypothetical protein XP_002343474 isofor... 32 1.3
gi|23200021 tumor necrosis factor receptor superfamily, member 2... 32 1.7
gi|25777684 Ras association domain family 1 isoform D [Homo sapi... 31 2.3
gi|20149588 Ras association domain family 1 isoform A [Homo sapi... 31 2.3
gi|157388953 G protein-coupled receptor 172B [Homo sapiens] 31 2.3
gi|157388951 G protein-coupled receptor 172B [Homo sapiens] 31 2.3
gi|169213965 PREDICTED: similar to hCG1645909 [Homo sapiens] 31 2.9
gi|239751822 PREDICTED: similar to hCG1645909 [Homo sapiens] 31 2.9
gi|239746313 PREDICTED: similar to hCG1645909 [Homo sapiens] 31 2.9
>gi|158635944 solute carrier family 23 (nucleobase transporters),
member 3 isoform 1 [Homo sapiens]
Length = 493
Score = 1010 bits (2612), Expect = 0.0
Identities = 493/493 (100%), Positives = 493/493 (100%)
Query: 1 MSRSPLNPSQLRSVGSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMA 60
MSRSPLNPSQLRSVGSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMA
Sbjct: 1 MSRSPLNPSQLRSVGSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMA 60
Query: 61 SLLCVSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLI 120
SLLCVSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLI
Sbjct: 61 SLLCVSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLI 120
Query: 121 PALVLTSQKLPRAIQTPGNSSLMLHLCRGPSCHGLGHWNTSLQEVSGAVVVSGLLQGMMG 180
PALVLTSQKLPRAIQTPGNSSLMLHLCRGPSCHGLGHWNTSLQEVSGAVVVSGLLQGMMG
Sbjct: 121 PALVLTSQKLPRAIQTPGNSSLMLHLCRGPSCHGLGHWNTSLQEVSGAVVVSGLLQGMMG 180
Query: 181 LLGSPGHVFPHCGPLVLAPSLVVAGLSAHREVAQFCFTHWGLALLTWAPASFMCAPGGEL 240
LLGSPGHVFPHCGPLVLAPSLVVAGLSAHREVAQFCFTHWGLALLTWAPASFMCAPGGEL
Sbjct: 181 LLGSPGHVFPHCGPLVLAPSLVVAGLSAHREVAQFCFTHWGLALLTWAPASFMCAPGGEL 240
Query: 241 QRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQAGSQQVAHLVGLLCVGLGLSPRLAQLLT 300
QRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQAGSQQVAHLVGLLCVGLGLSPRLAQLLT
Sbjct: 241 QRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQAGSQQVAHLVGLLCVGLGLSPRLAQLLT 300
Query: 301 TIPLPVVGGVLGVTQAVVLSAGFSSFYLADIDSGRNIFIVGFSIFMALLLPRWFREAPVL 360
TIPLPVVGGVLGVTQAVVLSAGFSSFYLADIDSGRNIFIVGFSIFMALLLPRWFREAPVL
Sbjct: 301 TIPLPVVGGVLGVTQAVVLSAGFSSFYLADIDSGRNIFIVGFSIFMALLLPRWFREAPVL 360
Query: 361 FSTGWSPLDVLLHSLLTQPIFLAGLSGFLLENTIPGTQLERGLGQGLPSPFTAQEARMPQ 420
FSTGWSPLDVLLHSLLTQPIFLAGLSGFLLENTIPGTQLERGLGQGLPSPFTAQEARMPQ
Sbjct: 361 FSTGWSPLDVLLHSLLTQPIFLAGLSGFLLENTIPGTQLERGLGQGLPSPFTAQEARMPQ 420
Query: 421 KPREKAAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPGDEEGGSSEPEEMADLLPGSGEP 480
KPREKAAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPGDEEGGSSEPEEMADLLPGSGEP
Sbjct: 421 KPREKAAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPGDEEGGSSEPEEMADLLPGSGEP 480
Query: 481 CPESSREGFRSQK 493
CPESSREGFRSQK
Sbjct: 481 CPESSREGFRSQK 493
>gi|222080105 solute carrier family 23 (nucleobase transporters),
member 3 isoform 2 [Homo sapiens]
Length = 610
Score = 462 bits (1189), Expect = e-130
Identities = 225/225 (100%), Positives = 225/225 (100%)
Query: 1 MSRSPLNPSQLRSVGSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMA 60
MSRSPLNPSQLRSVGSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMA
Sbjct: 1 MSRSPLNPSQLRSVGSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMA 60
Query: 61 SLLCVSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLI 120
SLLCVSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLI
Sbjct: 61 SLLCVSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLI 120
Query: 121 PALVLTSQKLPRAIQTPGNSSLMLHLCRGPSCHGLGHWNTSLQEVSGAVVVSGLLQGMMG 180
PALVLTSQKLPRAIQTPGNSSLMLHLCRGPSCHGLGHWNTSLQEVSGAVVVSGLLQGMMG
Sbjct: 121 PALVLTSQKLPRAIQTPGNSSLMLHLCRGPSCHGLGHWNTSLQEVSGAVVVSGLLQGMMG 180
Query: 181 LLGSPGHVFPHCGPLVLAPSLVVAGLSAHREVAQFCFTHWGLALL 225
LLGSPGHVFPHCGPLVLAPSLVVAGLSAHREVAQFCFTHWGLALL
Sbjct: 181 LLGSPGHVFPHCGPLVLAPSLVVAGLSAHREVAQFCFTHWGLALL 225
Score = 459 bits (1180), Expect = e-129
Identities = 249/335 (74%), Positives = 259/335 (77%), Gaps = 7/335 (2%)
Query: 165 VSGAVVVSGLLQGMMGLLGSPGHVFPHCGPL---VLAPSLVVAGLS---AHREVAQFCFT 218
VS V S + Q + +P PH G +L P + AG+S A + C+
Sbjct: 277 VSAFVGFSVIPQELSAPTKAPWIWLPHPGEWNWPLLTPRALAAGISMALAASTSSLGCYA 336
Query: 219 HWGLALLTWAPASFMCAPGGELQRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQAGSQQV 278
G L P C+ G L+ L L P G L QAGSQQV
Sbjct: 337 LCGRLLHLPPPPPHACSRGLSLEGLGSVLAGLLGSPMGTASSFPNVGKVG-LIQAGSQQV 395
Query: 279 AHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLADIDSGRNIF 338
AHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLADIDSGRNIF
Sbjct: 396 AHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLADIDSGRNIF 455
Query: 339 IVGFSIFMALLLPRWFREAPVLFSTGWSPLDVLLHSLLTQPIFLAGLSGFLLENTIPGTQ 398
IVGFSIFMALLLPRWFREAPVLFSTGWSPLDVLLHSLLTQPIFLAGLSGFLLENTIPGTQ
Sbjct: 456 IVGFSIFMALLLPRWFREAPVLFSTGWSPLDVLLHSLLTQPIFLAGLSGFLLENTIPGTQ 515
Query: 399 LERGLGQGLPSPFTAQEARMPQKPREKAAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPG 458
LERGLGQGLPSPFTAQEARMPQKPREKAAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPG
Sbjct: 516 LERGLGQGLPSPFTAQEARMPQKPREKAAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPG 575
Query: 459 DEEGGSSEPEEMADLLPGSGEPCPESSREGFRSQK 493
DEEGGSSEPEEMADLLPGSGEPCPESSREGFRSQK
Sbjct: 576 DEEGGSSEPEEMADLLPGSGEPCPESSREGFRSQK 610
>gi|222080107 solute carrier family 23 (nucleobase transporters),
member 3 isoform 3 [Homo sapiens]
Length = 618
Score = 459 bits (1180), Expect = e-129
Identities = 249/335 (74%), Positives = 259/335 (77%), Gaps = 7/335 (2%)
Query: 165 VSGAVVVSGLLQGMMGLLGSPGHVFPHCGPL---VLAPSLVVAGLS---AHREVAQFCFT 218
VS V S + Q + +P PH G +L P + AG+S A + C+
Sbjct: 285 VSAFVGFSVIPQELSAPTKAPWIWLPHPGEWNWPLLTPRALAAGISMALAASTSSLGCYA 344
Query: 219 HWGLALLTWAPASFMCAPGGELQRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQAGSQQV 278
G L P C+ G L+ L L P G L QAGSQQV
Sbjct: 345 LCGRLLHLPPPPPHACSRGLSLEGLGSVLAGLLGSPMGTASSFPNVGKVG-LIQAGSQQV 403
Query: 279 AHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLADIDSGRNIF 338
AHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLADIDSGRNIF
Sbjct: 404 AHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLADIDSGRNIF 463
Query: 339 IVGFSIFMALLLPRWFREAPVLFSTGWSPLDVLLHSLLTQPIFLAGLSGFLLENTIPGTQ 398
IVGFSIFMALLLPRWFREAPVLFSTGWSPLDVLLHSLLTQPIFLAGLSGFLLENTIPGTQ
Sbjct: 464 IVGFSIFMALLLPRWFREAPVLFSTGWSPLDVLLHSLLTQPIFLAGLSGFLLENTIPGTQ 523
Query: 399 LERGLGQGLPSPFTAQEARMPQKPREKAAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPG 458
LERGLGQGLPSPFTAQEARMPQKPREKAAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPG
Sbjct: 524 LERGLGQGLPSPFTAQEARMPQKPREKAAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPG 583
Query: 459 DEEGGSSEPEEMADLLPGSGEPCPESSREGFRSQK 493
DEEGGSSEPEEMADLLPGSGEPCPESSREGFRSQK
Sbjct: 584 DEEGGSSEPEEMADLLPGSGEPCPESSREGFRSQK 618
Score = 454 bits (1167), Expect = e-127
Identities = 224/233 (96%), Positives = 225/233 (96%), Gaps = 8/233 (3%)
Query: 1 MSRSPLNPSQLRSVGSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMA 60
MSRSPLNPSQLRSVGSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMA
Sbjct: 1 MSRSPLNPSQLRSVGSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMA 60
Query: 61 SLLCVSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLI 120
SLLCVSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLI
Sbjct: 61 SLLCVSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLI 120
Query: 121 PALVLTSQKLPRAIQTPGN--------SSLMLHLCRGPSCHGLGHWNTSLQEVSGAVVVS 172
PALVLTSQKLPRAIQTPGN +SLMLHLCRGPSCHGLGHWNTSLQEVSGAVVVS
Sbjct: 121 PALVLTSQKLPRAIQTPGNCEHRARARASLMLHLCRGPSCHGLGHWNTSLQEVSGAVVVS 180
Query: 173 GLLQGMMGLLGSPGHVFPHCGPLVLAPSLVVAGLSAHREVAQFCFTHWGLALL 225
GLLQGMMGLLGSPGHVFPHCGPLVLAPSLVVAGLSAHREVAQFCFTHWGLALL
Sbjct: 181 GLLQGMMGLLGSPGHVFPHCGPLVLAPSLVVAGLSAHREVAQFCFTHWGLALL 233
>gi|44680148 solute carrier family 23 (nucleobase transporters),
member 2 [Homo sapiens]
Length = 650
Score = 106 bits (265), Expect = 4e-23
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
Query: 44 PWGLSCLLALQHVLVMASLLCVSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTW 103
PW L L LQH L S LL ++ G ++ SQL+ + FF G++T+LQT
Sbjct: 98 PWYLCIFLGLQHYLTCFSGTIAVPFLLADAMCVGYDQWATSQLIGTIFFCVGITTLLQTT 157
Query: 104 MGSRLPLVQAPSLEFLIPALVLTSQKLPRAIQTP-----GNSSLMLHLCRGPSCHGLGHW 158
G RLPL QA + FL PA + S + T G + L+ H W
Sbjct: 158 FGCRLPLFQASAFAFLAPARAILSLDKWKCNTTDVSVANGTAELL---------HTEHIW 208
Query: 159 NTSLQEVSGAVVVSGLLQGMMGLLGSPGHVFPHCGPLVLAPSLVVAGLSAHREVAQFCFT 218
++E+ GA+++S L++ ++GLLG PG + + GPL + P++ + GLS + +
Sbjct: 209 YPRIREIQGAIIMSSLIEVVIGLLGLPGALLKYIGPLTITPTVALIGLSGFQAAGERAGK 268
Query: 219 HWGLALLT 226
HWG+A+LT
Sbjct: 269 HWGIAMLT 276
Score = 99.8 bits (247), Expect = 5e-21
Identities = 49/134 (36%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 270 LTQAGSQQVAHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLA 329
+T+ GS++V L + LG+ + + L ++P PV+G + ++ + G S+
Sbjct: 450 ITKVGSRRVIQCGAALMLALGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFI 509
Query: 330 DIDSGRNIFIVGFSIFMALLLPRWFREAPVLFSTGWSPLDVLLHSLLTQPIFLAGLSGFL 389
D++S RN+F++GFSIF L+LP + R+ P++ TG + +D +L+ LLT +F+ G F+
Sbjct: 510 DLNSSRNLFVLGFSIFFGLVLPSYLRQNPLV--TGITGIDQVLNVLLTTAMFVGGCVAFI 567
Query: 390 LENTIPGTQLERGL 403
L+NTIPGT ERG+
Sbjct: 568 LDNTIPGTPEERGI 581
>gi|40316845 solute carrier family 23 (nucleobase transporters),
member 2 [Homo sapiens]
Length = 650
Score = 106 bits (265), Expect = 4e-23
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
Query: 44 PWGLSCLLALQHVLVMASLLCVSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTW 103
PW L L LQH L S LL ++ G ++ SQL+ + FF G++T+LQT
Sbjct: 98 PWYLCIFLGLQHYLTCFSGTIAVPFLLADAMCVGYDQWATSQLIGTIFFCVGITTLLQTT 157
Query: 104 MGSRLPLVQAPSLEFLIPALVLTSQKLPRAIQTP-----GNSSLMLHLCRGPSCHGLGHW 158
G RLPL QA + FL PA + S + T G + L+ H W
Sbjct: 158 FGCRLPLFQASAFAFLAPARAILSLDKWKCNTTDVSVANGTAELL---------HTEHIW 208
Query: 159 NTSLQEVSGAVVVSGLLQGMMGLLGSPGHVFPHCGPLVLAPSLVVAGLSAHREVAQFCFT 218
++E+ GA+++S L++ ++GLLG PG + + GPL + P++ + GLS + +
Sbjct: 209 YPRIREIQGAIIMSSLIEVVIGLLGLPGALLKYIGPLTITPTVALIGLSGFQAAGERAGK 268
Query: 219 HWGLALLT 226
HWG+A+LT
Sbjct: 269 HWGIAMLT 276
Score = 99.8 bits (247), Expect = 5e-21
Identities = 49/134 (36%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 270 LTQAGSQQVAHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLA 329
+T+ GS++V L + LG+ + + L ++P PV+G + ++ + G S+
Sbjct: 450 ITKVGSRRVIQCGAALMLALGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFI 509
Query: 330 DIDSGRNIFIVGFSIFMALLLPRWFREAPVLFSTGWSPLDVLLHSLLTQPIFLAGLSGFL 389
D++S RN+F++GFSIF L+LP + R+ P++ TG + +D +L+ LLT +F+ G F+
Sbjct: 510 DLNSSRNLFVLGFSIFFGLVLPSYLRQNPLV--TGITGIDQVLNVLLTTAMFVGGCVAFI 567
Query: 390 LENTIPGTQLERGL 403
L+NTIPGT ERG+
Sbjct: 568 LDNTIPGTPEERGI 581
>gi|44680145 solute carrier family 23 (nucleobase transporters),
member 1 isoform a [Homo sapiens]
Length = 598
Score = 104 bits (260), Expect = 2e-22
Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 26 PAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMASLLCVSHLLLLCSLSPGGLSYSPSQ 85
P P P + PW L LL QH L S LL +L G + SQ
Sbjct: 22 PLPTEPKFDMLYKIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEALCVGHDQHMVSQ 81
Query: 86 LLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLIPA---LVLTSQKLPRAIQTPGNSSL 142
L+ + F G++T++QT +G RLPL QA + FL+PA L L K P + GN SL
Sbjct: 82 LIGTIFTCVGITTLIQTTVGIRLPLFQASAFAFLVPAKAILALERWKCPPEEEIYGNWSL 141
Query: 143 MLHLCRGPSCHGLGHWNTSLQEVSGAVVVSGLLQGMMGLLGSPGHVFPHCGPLVLAPSLV 202
L+ W+ ++EV GA++VS +++ ++GLLG PG + + GPL + P++
Sbjct: 142 PLNTSH--------IWHPRIREVQGAIMVSSVVEVVIGLLGLPGALLNYIGPLTVTPTVS 193
Query: 203 VAGLSAHREVAQFCFTHWGLA 223
+ GLS + +HWG++
Sbjct: 194 LIGLSVFQAAGDRAGSHWGIS 214
Score = 94.4 bits (233), Expect = 2e-19
Identities = 46/136 (33%), Positives = 78/136 (57%)
Query: 270 LTQAGSQQVAHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLA 329
+T+ GS++V + + LG + L ++P P++GG+ ++ + G S+
Sbjct: 391 ITKVGSRRVVQYGAAIMLVLGTIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFV 450
Query: 330 DIDSGRNIFIVGFSIFMALLLPRWFREAPVLFSTGWSPLDVLLHSLLTQPIFLAGLSGFL 389
D++S RN+F++GFS+F L LP + P +TG +D +L LLT +F+ G F+
Sbjct: 451 DMNSSRNLFVLGFSMFFGLTLPNYLESNPGAINTGILEVDQILIVLLTTEMFVGGCLAFI 510
Query: 390 LENTIPGTQLERGLGQ 405
L+NT+PG+ ERGL Q
Sbjct: 511 LDNTVPGSPEERGLIQ 526
>gi|44680143 solute carrier family 23 (nucleobase transporters),
member 1 isoform b [Homo sapiens]
Length = 602
Score = 99.0 bits (245), Expect = 9e-21
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 26 PAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMASLLCVSHLLLLCSLSPGGLSYSPSQ 85
P P P + PW L LL QH L S LL +L G + SQ
Sbjct: 22 PLPTEPKFDMLYKIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEALCVGHDQHMVSQ 81
Query: 86 LLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLIPA---LVLTSQKLPRAIQTPGNSSL 142
L+ + F G++T++QT +G RLPL QA + FL+PA L L K P + GN SL
Sbjct: 82 LIGTIFTCVGITTLIQTTVGIRLPLFQASAFAFLVPAKAILALERWKCPPEEEIYGNWSL 141
Query: 143 MLHLCRGPSCHGLGHWNTSLQE----VSGAVVVSGLLQGMMGLLGSPGHVFPHCGPLVLA 198
L+ W+ ++E V GA++VS +++ ++GLLG PG + + GPL +
Sbjct: 142 PLNTSH--------IWHPRIREVGLHVQGAIMVSSVVEVVIGLLGLPGALLNYIGPLTVT 193
Query: 199 PSLVVAGLSAHREVAQFCFTHWGLA 223
P++ + GLS + +HWG++
Sbjct: 194 PTVSLIGLSVFQAAGDRAGSHWGIS 218
Score = 94.4 bits (233), Expect = 2e-19
Identities = 46/136 (33%), Positives = 78/136 (57%)
Query: 270 LTQAGSQQVAHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLA 329
+T+ GS++V + + LG + L ++P P++GG+ ++ + G S+
Sbjct: 395 ITKVGSRRVVQYGAAIMLVLGTIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFV 454
Query: 330 DIDSGRNIFIVGFSIFMALLLPRWFREAPVLFSTGWSPLDVLLHSLLTQPIFLAGLSGFL 389
D++S RN+F++GFS+F L LP + P +TG +D +L LLT +F+ G F+
Sbjct: 455 DMNSSRNLFVLGFSMFFGLTLPNYLESNPGAINTGILEVDQILIVLLTTEMFVGGCLAFI 514
Query: 390 LENTIPGTQLERGLGQ 405
L+NT+PG+ ERGL Q
Sbjct: 515 LDNTVPGSPEERGLIQ 530
>gi|148664218 POU transcription factor [Homo sapiens]
Length = 436
Score = 33.5 bits (75), Expect = 0.45
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 372 LHSLLTQPIFLAGLSGFLLENTIPGTQ-LERGLGQGLPSPFTAQEARMPQKPREKAAQVY 430
L L+ P L +S FLL T PG Q L+ L LP P +PQ A+Q +
Sbjct: 94 LQQLVLVPGHLQSVSQFLLSQTQPGQQGLQPNL---LPFPQQQSGLLLPQTGPGLASQAF 150
Query: 431 RLP-FPIQNLCPCIPQPLHCLCPLPEDPGDEEGGSSEPEEMADL 473
P P +L P + H P+P+ GG+ EP ++ +L
Sbjct: 151 GHPGLPGSSLEPHLEASQH--LPVPKHL-PSSGGADEPSDLEEL 191
>gi|90652859 protein-tyrosine-phosphatase non-receptor 5 isoform a
[Homo sapiens]
Length = 565
Score = 33.1 bits (74), Expect = 0.59
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 15/130 (11%)
Query: 15 GSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMASLLCV---SHLLLL 71
G QD+ +PPP P +P + DP P G A H L + S LC+ S LL
Sbjct: 48 GLQDSQREMPPPPPPSPPS---DPAQKPPPRG-----AGSHSLTVRSSLCLFAASQFLLA 99
Query: 72 CSL----SPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLIPALVLTS 127
C + G + + L SS + W+ S V + L FL LVL +
Sbjct: 100 CGVLWFSGYGHIWSQNATNLVSSLLTLLKQLEPTAWLDSGTWGVPSLLLVFLSVGLVLVT 159
Query: 128 QKLPRAIQTP 137
+ ++TP
Sbjct: 160 TLVWHLLRTP 169
>gi|90652853 protein-tyrosine-phosphatase non-receptor 5 isoform a
[Homo sapiens]
Length = 565
Score = 33.1 bits (74), Expect = 0.59
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 15/130 (11%)
Query: 15 GSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMASLLCV---SHLLLL 71
G QD+ +PPP P +P + DP P G A H L + S LC+ S LL
Sbjct: 48 GLQDSQREMPPPPPPSPPS---DPAQKPPPRG-----AGSHSLTVRSSLCLFAASQFLLA 99
Query: 72 CSL----SPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLIPALVLTS 127
C + G + + L SS + W+ S V + L FL LVL +
Sbjct: 100 CGVLWFSGYGHIWSQNATNLVSSLLTLLKQLEPTAWLDSGTWGVPSLLLVFLSVGLVLVT 159
Query: 128 QKLPRAIQTP 137
+ ++TP
Sbjct: 160 TLVWHLLRTP 169
>gi|28872814 semaphorin 4G [Homo sapiens]
Length = 843
Score = 33.1 bits (74), Expect = 0.59
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 451 CPLPEDPGDEEGGSSEPEEMADLLPGSGEPCP 482
CP ED GD+EG ++PG G P P
Sbjct: 739 CPGEEDEGDDEGAGGLEGSCLQIIPGEGAPAP 770
>gi|157676340 zinc finger protein 142 [Homo sapiens]
Length = 1687
Score = 32.7 bits (73), Expect = 0.77
Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 16/118 (13%)
Query: 390 LENTIPGTQLERGLGQGLPSPFTAQEA-------------RMPQKPREKAAQVYRLPF-P 435
L+ +PGTQ G P P +QEA R P++ E A V P P
Sbjct: 908 LQPVLPGTQASEDTESGKPPP-ASQEAELLLPKDAPLELPREPEETEEPLATVSGSPVPP 966
Query: 436 IQNLCPCIPQPLHCLCPLPEDPGDEEGGSSEPEEMADLLPGSGEPCPESSREGFRSQK 493
N P HC P+P G+ + + D +P +G P + + R ++
Sbjct: 967 AGNSLPTEAPKKHCFDPVP-PAGNSSPTEAPKKHHLDPVPPAGNSSPTEALKKHRFEQ 1023
>gi|48375173 microtubule-associated protein 6 isoform 1 [Homo
sapiens]
Length = 813
Score = 32.7 bits (73), Expect = 0.77
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 392 NTIPGTQLERGLGQGLPSPFTAQEARMPQKPREKAAQVYRLPFPIQNLCPCIPQPLHCLC 451
+ +PG L +G G + P Q + +P P++ + P P+++ +P+PL
Sbjct: 465 SVVPG--LLKGQGPMVQEPLKKQGSVVPGPPKDLGPMI---PLPVKDQDHTVPEPLKNES 519
Query: 452 PLPEDPGDEEGGS--SEPEEMADLLPG----SGEPCPESSRE 487
P+ P ++G S P+ + ++P G PES ++
Sbjct: 520 PVISAPVKDQGPSVPVPPKNQSPMVPAKVKDQGSVVPESLKD 561
>gi|144922631 tigger transposable element derived 5 [Homo sapiens]
Length = 593
Score = 32.3 bits (72), Expect = 1.0
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 19/129 (14%)
Query: 366 SPLDVLLHSLLTQPIFLAGLSGFLLENTIPGTQLERGLGQGLPSPF---TAQEARMPQKP 422
SPLD + +L ++LAGLS L++ +ER GL + F +++
Sbjct: 395 SPLDFMRSFMLKDMLYLAGLSWDLVQ----AGSIERCWLLGLRAAFEPRPGEDSAGQPAQ 450
Query: 423 REKAAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPG-----DEEGGSSE--PEEMADLLP 475
E+AA+ R+ + +L L C PE+ D++GG E EE+ LP
Sbjct: 451 AEEAAEHSRVLSDLTHLA-----ALAYKCLAPEEVAEWLHLDDDGGPPEGCREEVGPALP 505
Query: 476 GSGEPCPES 484
+ P P S
Sbjct: 506 PAAPPAPAS 514
>gi|52218828 olfactory receptor, family 1, subfamily M, member 1
[Homo sapiens]
Length = 313
Score = 32.3 bits (72), Expect = 1.0
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 39 LCGSLPWGLSCLLALQHVLVMASLL-CVSHLL--LLCSLSP 76
L G+L W SC ++L H+L+MA L+ C SH + C L+P
Sbjct: 144 LVGAL-WAFSCFISLTHILLMARLVFCGSHEVPHYFCDLTP 183
>gi|52353302 transmembrane protein 198 [Homo sapiens]
Length = 360
Score = 32.3 bits (72), Expect = 1.0
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 270 LTQAGSQQVAHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLA 329
L+ S +A +GLLC GL +A L+ ++ L +VG +LG+ A G + +Y
Sbjct: 90 LSAGASAGIALGIGLLC---GL---VAMLVRSVGLFLVGLLLGLLLAAAALLGSAPYYQP 143
Query: 330 DIDSGRNIFIVGFSIFMALLLPRWFREAPVL 360
G ++G + ALL RW R L
Sbjct: 144 GSVWGPLGLLLGGGLLCALLTLRWPRPLTTL 174
>gi|239751047 PREDICTED: hypothetical protein isoform 3 [Homo
sapiens]
Length = 196
Score = 32.0 bits (71), Expect = 1.3
Identities = 45/170 (26%), Positives = 58/170 (34%), Gaps = 41/170 (24%)
Query: 146 LCRGPS-CHGLGHWNTSLQEVSGAVVVSGLLQGMMGLLGSPGHVFPHCGPLVLAPSLVVA 204
L RGP C G SL S + L G G GS G F PL L + A
Sbjct: 8 LGRGPVVCDG------SLSRASACTIKDAL--GQQGS-GSMGEGFRP--PLSLPSPISRA 56
Query: 205 GLSAHREVAQFCFTH----WGLALLTWAPAS-------------------------FMCA 235
GL + V + H W L L W P+S +
Sbjct: 57 GLGGLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTPASPPDPAPWASE 116
Query: 236 PGGELQRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQAGSQQVAHLVGLL 285
PG + T S ++G+ + PPP F CL+ A + A G L
Sbjct: 117 PGAMASSNSTTGTSSTTGTSSSGTPPPPAFSFSCLSLAAAAAAAATSGAL 166
>gi|239751045 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 196
Score = 32.0 bits (71), Expect = 1.3
Identities = 45/170 (26%), Positives = 58/170 (34%), Gaps = 41/170 (24%)
Query: 146 LCRGPS-CHGLGHWNTSLQEVSGAVVVSGLLQGMMGLLGSPGHVFPHCGPLVLAPSLVVA 204
L RGP C G SL S + L G G GS G F PL L + A
Sbjct: 8 LGRGPVVCDG------SLSRASACTIKDAL--GQQGS-GSMGEGFRP--PLSLPSPISRA 56
Query: 205 GLSAHREVAQFCFTH----WGLALLTWAPAS-------------------------FMCA 235
GL + V + H W L L W P+S +
Sbjct: 57 GLGGLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTPASPPDPAPWASE 116
Query: 236 PGGELQRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQAGSQQVAHLVGLL 285
PG + T S ++G+ + PPP F CL+ A + A G L
Sbjct: 117 PGAMASSNSTTGTSSTTGTSSSGTPPPPAFSFSCLSLAAAAAAAATSGAL 166
>gi|239751043 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 196
Score = 32.0 bits (71), Expect = 1.3
Identities = 45/170 (26%), Positives = 58/170 (34%), Gaps = 41/170 (24%)
Query: 146 LCRGPS-CHGLGHWNTSLQEVSGAVVVSGLLQGMMGLLGSPGHVFPHCGPLVLAPSLVVA 204
L RGP C G SL S + L G G GS G F PL L + A
Sbjct: 8 LGRGPVVCDG------SLSRASACTIKDAL--GQQGS-GSMGEGFRP--PLSLPSPISRA 56
Query: 205 GLSAHREVAQFCFTH----WGLALLTWAPAS-------------------------FMCA 235
GL + V + H W L L W P+S +
Sbjct: 57 GLGGLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTPASPPDPAPWASE 116
Query: 236 PGGELQRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQAGSQQVAHLVGLL 285
PG + T S ++G+ + PPP F CL+ A + A G L
Sbjct: 117 PGAMASSNSTTGTSSTTGTSSSGTPPPPAFSFSCLSLAAAAAAAATSGAL 166
>gi|239745488 PREDICTED: hypothetical protein XP_002343476 isoform 3
[Homo sapiens]
Length = 196
Score = 32.0 bits (71), Expect = 1.3
Identities = 45/170 (26%), Positives = 58/170 (34%), Gaps = 41/170 (24%)
Query: 146 LCRGPS-CHGLGHWNTSLQEVSGAVVVSGLLQGMMGLLGSPGHVFPHCGPLVLAPSLVVA 204
L RGP C G SL S + L G G GS G F PL L + A
Sbjct: 8 LGRGPVVCDG------SLSRASACTIKDAL--GQQGS-GSMGEGFRP--PLSLPSPISRA 56
Query: 205 GLSAHREVAQFCFTH----WGLALLTWAPAS-------------------------FMCA 235
GL + V + H W L L W P+S +
Sbjct: 57 GLGGLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTPASPPDPAPWASE 116
Query: 236 PGGELQRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQAGSQQVAHLVGLL 285
PG + T S ++G+ + PPP F CL+ A + A G L
Sbjct: 117 PGAMASSNSTTGTSSTTGTSSSGTPPPPAFSFSCLSLAAAAAAAATSGAL 166
>gi|239745486 PREDICTED: hypothetical protein XP_002343475 isoform 2
[Homo sapiens]
Length = 196
Score = 32.0 bits (71), Expect = 1.3
Identities = 45/170 (26%), Positives = 58/170 (34%), Gaps = 41/170 (24%)
Query: 146 LCRGPS-CHGLGHWNTSLQEVSGAVVVSGLLQGMMGLLGSPGHVFPHCGPLVLAPSLVVA 204
L RGP C G SL S + L G G GS G F PL L + A
Sbjct: 8 LGRGPVVCDG------SLSRASACTIKDAL--GQQGS-GSMGEGFRP--PLSLPSPISRA 56
Query: 205 GLSAHREVAQFCFTH----WGLALLTWAPAS-------------------------FMCA 235
GL + V + H W L L W P+S +
Sbjct: 57 GLGGLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTPASPPDPAPWASE 116
Query: 236 PGGELQRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQAGSQQVAHLVGLL 285
PG + T S ++G+ + PPP F CL+ A + A G L
Sbjct: 117 PGAMASSNSTTGTSSTTGTSSSGTPPPPAFSFSCLSLAAAAAAAATSGAL 166
>gi|239745484 PREDICTED: hypothetical protein XP_002343474 isoform 1
[Homo sapiens]
Length = 196
Score = 32.0 bits (71), Expect = 1.3
Identities = 45/170 (26%), Positives = 58/170 (34%), Gaps = 41/170 (24%)
Query: 146 LCRGPS-CHGLGHWNTSLQEVSGAVVVSGLLQGMMGLLGSPGHVFPHCGPLVLAPSLVVA 204
L RGP C G SL S + L G G GS G F PL L + A
Sbjct: 8 LGRGPVVCDG------SLSRASACTIKDAL--GQQGS-GSMGEGFRP--PLSLPSPISRA 56
Query: 205 GLSAHREVAQFCFTH----WGLALLTWAPAS-------------------------FMCA 235
GL + V + H W L L W P+S +
Sbjct: 57 GLGGLKRVERVGLAHTKEYWLLMALGWPPSSPSPPSGDCCSCTIGGTPASPPDPAPWASE 116
Query: 236 PGGELQRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQAGSQQVAHLVGLL 285
PG + T S ++G+ + PPP F CL+ A + A G L
Sbjct: 117 PGAMASSNSTTGTSSTTGTSSSGTPPPPAFSFSCLSLAAAAAAAATSGAL 166
>gi|23200021 tumor necrosis factor receptor superfamily, member 25
isoform 1 precursor [Homo sapiens]
Length = 426
Score = 31.6 bits (70), Expect = 1.7
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 234 CAPGGELQRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQAGSQQVAHLVGLLCVGLGLSP 293
C G L RH L S CLP HG GC++ L +P
Sbjct: 141 CLDCGALHRHTRLLCSRRDTDCGTCLPGFYEHGDGCVSCPTPPP----------SLAGAP 190
Query: 294 RLAQLLTTIPLPVVGGVLGVTQAVVLSAG 322
+ + +PL V GG +GV VL AG
Sbjct: 191 -WGAVQSAVPLSVAGGRVGVFWVQVLLAG 218
>gi|25777684 Ras association domain family 1 isoform D [Homo
sapiens]
Length = 344
Score = 31.2 bits (69), Expect = 2.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 28 PQNPSTHSWDPLCGSLPWGL 47
P P+TH+W LCG WG+
Sbjct: 56 PAGPATHTWCDLCGDFIWGV 75
>gi|20149588 Ras association domain family 1 isoform A [Homo
sapiens]
Length = 340
Score = 31.2 bits (69), Expect = 2.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 28 PQNPSTHSWDPLCGSLPWGL 47
P P+TH+W LCG WG+
Sbjct: 56 PAGPATHTWCDLCGDFIWGV 75
>gi|157388953 G protein-coupled receptor 172B [Homo sapiens]
Length = 448
Score = 31.2 bits (69), Expect = 2.3
Identities = 92/348 (26%), Positives = 115/348 (33%), Gaps = 78/348 (22%)
Query: 5 PLNPSQLRSVGSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMASLLC 64
P+ Q+ SV LAPL H P+ G L + L LV+A C
Sbjct: 80 PIQVVQVLSVVGTALLAPL---------WHHVAPVAGQL----HSVAFLTLALVLAMACC 126
Query: 65 VSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLIPALV 124
S++ L LS + P L S F G+S +L L LVQ PA
Sbjct: 127 TSNVTFLPFLS-----HLPPPFLRSFFLGQGLSALLPCV----LALVQGVGRLECPPA-- 175
Query: 125 LTSQKLPRAIQTPGNSSLMLHLC-RGPSCHGLGHWNTSLQEVSGAVVVSGLLQGMMGL-- 181
T G S L R P+ W + V+ A GLL + L
Sbjct: 176 ----------PTNGTSGPPLDFPERFPA--STFFWALTALLVTSAAAFRGLLLLLPSLPS 223
Query: 182 -----------LGSPG-----HVFPHCGPLVLAPSLVVAGLSAHREVAQFCFTHWG---L 222
LGSPG PL PS + A F+ G L
Sbjct: 224 VTTGGSGPELQLGSPGAEEEEKEEEEALPLQEPPSQAAGTIPGPDPEAHQLFSAHGAFLL 283
Query: 223 ALLTWAPA----------SFMCAPGGELQRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQ 272
L+ + A SF C P G L H +L GS N L G C +
Sbjct: 284 GLMAFTSAVTNGVLPSVQSFSCLPYGRLAYHLAVVL----GSAANPLACFLAMGVLCRSL 339
Query: 273 AGSQQVAHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLS 320
AG LVGL +G+ L L P P + G VVLS
Sbjct: 340 AG------LVGLSLLGMLFGAYLMALAILSPCPPLVGTTAGVVLVVLS 381
>gi|157388951 G protein-coupled receptor 172B [Homo sapiens]
Length = 448
Score = 31.2 bits (69), Expect = 2.3
Identities = 92/348 (26%), Positives = 115/348 (33%), Gaps = 78/348 (22%)
Query: 5 PLNPSQLRSVGSQDALAPLPPPAPQNPSTHSWDPLCGSLPWGLSCLLALQHVLVMASLLC 64
P+ Q+ SV LAPL H P+ G L + L LV+A C
Sbjct: 80 PIQVVQVLSVVGTALLAPL---------WHHVAPVAGQL----HSVAFLTLALVLAMACC 126
Query: 65 VSHLLLLCSLSPGGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLIPALV 124
S++ L LS + P L S F G+S +L L LVQ PA
Sbjct: 127 TSNVTFLPFLS-----HLPPPFLRSFFLGQGLSALLPCV----LALVQGVGRLECPPA-- 175
Query: 125 LTSQKLPRAIQTPGNSSLMLHLC-RGPSCHGLGHWNTSLQEVSGAVVVSGLLQGMMGL-- 181
T G S L R P+ W + V+ A GLL + L
Sbjct: 176 ----------PTNGTSGPPLDFPERFPA--STFFWALTALLVTSAAAFRGLLLLLPSLPS 223
Query: 182 -----------LGSPG-----HVFPHCGPLVLAPSLVVAGLSAHREVAQFCFTHWG---L 222
LGSPG PL PS + A F+ G L
Sbjct: 224 VTTGGSGPELQLGSPGAEEEEKEEEEALPLQEPPSQAAGTIPGPDPEAHQLFSAHGAFLL 283
Query: 223 ALLTWAPA----------SFMCAPGGELQRHQLTLLSLSSGSFRNCLPPPRHHGFGCLTQ 272
L+ + A SF C P G L H +L GS N L G C +
Sbjct: 284 GLMAFTSAVTNGVLPSVQSFSCLPYGRLAYHLAVVL----GSAANPLACFLAMGVLCRSL 339
Query: 273 AGSQQVAHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLS 320
AG LVGL +G+ L L P P + G VVLS
Sbjct: 340 AG------LVGLSLLGMLFGAYLMALAILSPCPPLVGTTAGVVLVVLS 381
>gi|169213965 PREDICTED: similar to hCG1645909 [Homo sapiens]
Length = 591
Score = 30.8 bits (68), Expect = 2.9
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 15/83 (18%)
Query: 420 QKPREK-----AAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPGDEEGGSSEPEEMADLL 474
QKPR+K + R P P ++L P+ L + P P+ G GG++ P D
Sbjct: 127 QKPRKKKLTQASESQTRTPKPRRSLALNKPEKL--VAPSPDQKGSGTGGTTTPPRCPD-- 182
Query: 475 PGSGEPCPESS-----REGFRSQ 492
G P P SS R+G +SQ
Sbjct: 183 -SCGHPRPASSSPPGDRKGGQSQ 204
>gi|239751822 PREDICTED: similar to hCG1645909 [Homo sapiens]
Length = 591
Score = 30.8 bits (68), Expect = 2.9
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 15/83 (18%)
Query: 420 QKPREK-----AAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPGDEEGGSSEPEEMADLL 474
QKPR+K + R P P ++L P+ L + P P+ G GG++ P D
Sbjct: 127 QKPRKKKLTQASESQTRTPKPRRSLALNKPEKL--VAPSPDQKGSGTGGTTTPPRCPD-- 182
Query: 475 PGSGEPCPESS-----REGFRSQ 492
G P P SS R+G +SQ
Sbjct: 183 -SCGHPRPASSSPPGDRKGGQSQ 204
>gi|239746313 PREDICTED: similar to hCG1645909 [Homo sapiens]
Length = 591
Score = 30.8 bits (68), Expect = 2.9
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 15/83 (18%)
Query: 420 QKPREK-----AAQVYRLPFPIQNLCPCIPQPLHCLCPLPEDPGDEEGGSSEPEEMADLL 474
QKPR+K + R P P ++L P+ L + P P+ G GG++ P D
Sbjct: 127 QKPRKKKLTQASESQTRTPKPRRSLALNKPEKL--VAPSPDQKGSGTGGTTTPPRCPD-- 182
Query: 475 PGSGEPCPESS-----REGFRSQ 492
G P P SS R+G +SQ
Sbjct: 183 -SCGHPRPASSSPPGDRKGGQSQ 204
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,397,477
Number of Sequences: 37866
Number of extensions: 1306183
Number of successful extensions: 5034
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 4991
Number of HSP's gapped (non-prelim): 80
length of query: 493
length of database: 18,247,518
effective HSP length: 106
effective length of query: 387
effective length of database: 14,233,722
effective search space: 5508450414
effective search space used: 5508450414
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.