Guide to the Human Genome
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Name: SLC23A2 Sequence: fasta or formatted (650aa) NCBI GI: 40316845
Description:

solute carrier family 23 (nucleobase transporters), member 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt mRNA [650aa] solute carrier family 23 (nucleobase transporters), member 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         50           2
 C cysteine            2.2         14           1
 D aspartate           3.7         24           1
 E glutamate           3.4         22           2
 F phenylalanine       6.0         39           2
 G glycine             9.8         64           2
 H histidine           0.9          6           1
 I isoleucine          8.0         52           2
 K lysine              4.3         28           2
 L leucine            11.4         74           2
 M methionine          2.5         16           2
 N asparagine          3.1         20           1
 P proline             5.4         35           4
 Q glutamine           2.8         18           1
 R arginine            3.1         20           2
 S serine              7.7         50           3
 T threonine           7.2         47           2
 V valine              6.0         39           2
 W tryptophan          1.7         11           1
 Y tyrosine            3.2         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 23 (nucleobase transporters), ... 
SLC23A2               1.000   solute carrier family 23 (nucleobase transporters), ...
SLC23A1               0.593   solute carrier family 23 (nucleobase transporters), ...
SLC23A1               0.588   solute carrier family 23 (nucleobase transporters), ...
SLC23A3               0.198   solute carrier family 23 (nucleobase transporters),...
SLC23A3               0.198   solute carrier family 23 (nucleobase transporters),...
SLC23A3               0.063   solute carrier family 23 (nucleobase transporters),...
ND6                   0.007   NADH dehydrogenase subunit 6 
ND6                   0.007   NADH dehydrogenase subunit 6 
SLC16A2               0.005   solute carrier family 16, member 2 
SLC16A10              0.005   solute carrier family 16, member 10 
NNT                   0.005   nicotinamide nucleotide transhydrogenase 
NNT                   0.005   nicotinamide nucleotide transhydrogenase 
UBAC2                 0.005   UBA domain containing 2 isoform 1 
S1PR2                 0.004   endothelial differentiation, sphingolipid G-protein...
TMEM79                0.004   transmembrane protein 79 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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