Guide to the Human Genome
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Name: GPR172B Sequence: fasta or formatted (448aa) NCBI GI: 157388951
Description:

G protein-coupled receptor 172B

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt mRNA [448aa] G protein-coupled receptor 172B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         52           3
 C cysteine            2.7         12           2
 D aspartate           1.1          5           1
 E glutamate           3.6         16           4
 F phenylalanine       4.7         21           2
 G glycine            10.0         45           3
 H histidine           2.2         10           2
 I isoleucine          1.3          6           1
 K lysine              1.1          5           1
 L leucine            18.3         82           5
 M methionine          1.8          8           1
 N asparagine          1.3          6           1
 P proline             9.2         41           3
 Q glutamine           3.1         14           1
 R arginine            2.2         10           1
 S serine              7.6         34           2
 T threonine           4.5         20           2
 V valine             10.7         48           3
 W tryptophan          1.6          7           1
 Y tyrosine            1.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 172B 
GPR172B               1.000   G protein-coupled receptor 172B 
GPR172A               0.843   G protein-coupled receptor 172A 
C20orf54              0.316   hypothetical protein LOC113278 
MAST4                 0.015   microtubule associated serine/threonine kinase famil...
ANKRD34A              0.012   ankyrin repeat domain 34 
KCNH3                 0.012   potassium voltage-gated channel, subfamily H (eag-re...
ADCY7                 0.010   adenylate cyclase 7 
HNRNPUL2              0.009   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
SELV                  0.009   selenoprotein V 
POU2F1                0.008   POU class 2 homeobox 1 
MAP3K6                0.008   mitogen-activated protein kinase kinase kinase 6 [Ho...
PAXIP1                0.008   PAX interacting protein 1 
SCAF1                 0.008   SR-related CTD-associated factor 1 
MAP1A                 0.008   microtubule-associated protein 1A 
C12orf68              0.008   hypothetical protein LOC387856 
PRCC                  0.008   papillary renal cell carcinoma translocation-associa...
KLHL14                0.008   kelch-like 14 
PRCC                  0.008   papillary renal cell carcinoma translocation-associa...
SLC23A3               0.007   solute carrier family 23 (nucleobase transporters),...
TMEM198               0.007   transmembrane protein 198 
DNHD1                 0.007   dynein heavy chain domain 1 isoform 1 
ZFHX2                 0.007   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.007   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.007   PREDICTED: zinc finger homeobox 2 
MAST2                 0.006   microtubule associated serine/threonine kinase 2 [H...
PRKCSH                0.006   protein kinase C substrate 80K-H isoform 2 
MFSD9                 0.006   major facilitator superfamily domain containing 9 [...
SLC5A10               0.006   solute carrier family 5 (sodium/glucose cotransport...
SLC5A10               0.006   solute carrier family 5 (sodium/glucose cotransport...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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