Guide to the Human Genome
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Name: SLC23A3 Sequence: fasta or formatted (493aa) NCBI GI: 158635944
Description:

solute carrier family 23 (nucleobase transporters), member 3 isoform 1

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [610aa] solute carrier family 23 (nucleobase transporters), member 3 isof...
alt prot [618aa] solute carrier family 23 (nucleobase transporters), member 3 isof...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         32           2
 C cysteine            3.7         18           1
 D aspartate           1.6          8           1
 E glutamate           3.7         18           2
 F phenylalanine       4.3         21           2
 G glycine             9.7         48           2
 H histidine           3.2         16           2
 I isoleucine          2.4         12           1
 K lysine              0.8          4           1
 L leucine            17.6         87           4
 M methionine          2.2         11           2
 N asparagine          1.6          8           1
 P proline            10.3         51           3
 Q glutamine           5.7         28           2
 R arginine            3.9         19           1
 S serine             11.2         55           2
 T threonine           3.7         18           2
 V valine              5.7         28           3
 W tryptophan          1.6          8           1
 Y tyrosine            0.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 23 (nucleobase transporters),... 
SLC23A3               0.444   solute carrier family 23 (nucleobase transporters),...
SLC23A3               0.441   solute carrier family 23 (nucleobase transporters),...
SLC23A2               0.082   solute carrier family 23 (nucleobase transporters), ...
SLC23A2               0.082   solute carrier family 23 (nucleobase transporters), ...
SLC23A1               0.080   solute carrier family 23 (nucleobase transporters), ...
SLC23A1               0.075   solute carrier family 23 (nucleobase transporters), ...
POU2F3                0.008   POU transcription factor 
PTPN5                 0.008   protein-tyrosine-phosphatase non-receptor 5 isoform ...
PTPN5                 0.008   protein-tyrosine-phosphatase non-receptor 5 isoform ...
SEMA4G                0.008   semaphorin 4G 
ZNF142                0.008   zinc finger protein 142 
MAP6                  0.008   microtubule-associated protein 6 isoform 1 
TIGD5                 0.007   tigger transposable element derived 5 
OR1M1                 0.007   olfactory receptor, family 1, subfamily M, member 1 ...
TMEM198               0.007   transmembrane protein 198 
LOC100289092          0.007   PREDICTED: hypothetical protein isoform 3 
LOC100289092          0.007   PREDICTED: hypothetical protein isoform 2 
LOC100289092          0.007   PREDICTED: hypothetical protein isoform 1 
LOC100289092          0.007   PREDICTED: hypothetical protein XP_002343476 isofor...
LOC100289092          0.007   PREDICTED: hypothetical protein XP_002343475 isofor...
LOC100289092          0.007   PREDICTED: hypothetical protein XP_002343474 isofor...
TNFRSF25              0.007   tumor necrosis factor receptor superfamily, member 2...
RASSF1                0.006   Ras association domain family 1 isoform D 
RASSF1                0.006   Ras association domain family 1 isoform A 
GPR172B               0.006   G protein-coupled receptor 172B 
GPR172B               0.006   G protein-coupled receptor 172B 
LOC388553             0.006   PREDICTED: similar to hCG1645909 
LOC388553             0.006   PREDICTED: similar to hCG1645909 
LOC388553             0.006   PREDICTED: similar to hCG1645909 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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