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Search of human proteins with 157694520
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157694520 enoyl Coenzyme A hydratase domain containing 1
isoform 3 [Homo sapiens]
(226 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isof... 447 e-126
gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isof... 447 e-126
gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isof... 447 e-126
gi|157694522 enoyl Coenzyme A hydratase domain containing 1 isof... 95 6e-20
gi|50593027 enoyl Coenzyme A hydratase domain containing 1 isofo... 95 6e-20
gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... 89 2e-18
gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... 64 8e-11
gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas... 62 4e-10
gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ... 61 9e-10
gi|20127408 mitochondrial trifunctional protein, alpha subunit p... 58 8e-09
gi|221307494 chromodomain protein, Y chromosome-like isoform a [... 53 2e-07
gi|221136756 chromodomain protein, Y chromosome-like isoform d [... 53 2e-07
gi|221136753 chromodomain protein, Y chromosome-like isoform d [... 53 2e-07
gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor... 50 1e-06
gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo... 50 1e-06
gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s... 50 1e-06
gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s... 50 1e-06
gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Hom... 48 6e-06
gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] 47 2e-05
gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] 47 2e-05
gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] 39 0.003
gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [... 39 0.004
gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [... 39 0.004
gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Hom... 36 0.023
gi|35493868 otoferlin isoform b [Homo sapiens] 32 0.58
gi|35493860 otoferlin isoform d [Homo sapiens] 32 0.58
gi|26051246 tumor necrosis factor ligand superfamily, member 13 ... 30 1.3
gi|4507599 tumor necrosis factor ligand superfamily, member 13 i... 30 1.3
gi|26051248 tumor necrosis factor ligand superfamily, member 13 ... 30 1.3
gi|169216272 PREDICTED: hypothetical protein [Homo sapiens] 30 1.3
>gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isoform
3 [Homo sapiens]
Length = 226
Score = 447 bits (1150), Expect = e-126
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 1 MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLT 60
MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLT
Sbjct: 1 MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLT 60
Query: 61 RFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVE 120
RFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVE
Sbjct: 61 RFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVE 120
Query: 121 IIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIR 180
IIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIR
Sbjct: 121 IIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIR 180
Query: 181 ALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAKKGKFNK 226
ALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAKKGKFNK
Sbjct: 181 ALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAKKGKFNK 226
>gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isoform
1 [Homo sapiens]
Length = 301
Score = 447 bits (1150), Expect = e-126
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 1 MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLT 60
MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLT
Sbjct: 76 MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLT 135
Query: 61 RFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVE 120
RFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVE
Sbjct: 136 RFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVE 195
Query: 121 IIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIR 180
IIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIR
Sbjct: 196 IIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIR 255
Query: 181 ALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAKKGKFNK 226
ALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAKKGKFNK
Sbjct: 256 ALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAKKGKFNK 301
>gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isoform
5 [Homo sapiens]
Length = 307
Score = 447 bits (1150), Expect = e-126
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 1 MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLT 60
MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLT
Sbjct: 82 MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLT 141
Query: 61 RFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVE 120
RFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVE
Sbjct: 142 RFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVE 201
Query: 121 IIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIR 180
IIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIR
Sbjct: 202 IIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIR 261
Query: 181 ALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAKKGKFNK 226
ALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAKKGKFNK
Sbjct: 262 ALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAKKGKFNK 307
>gi|157694522 enoyl Coenzyme A hydratase domain containing 1
isoform 4 [Homo sapiens]
Length = 70
Score = 94.7 bits (234), Expect = 6e-20
Identities = 47/52 (90%), Positives = 47/52 (90%)
Query: 1 MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVC 52
MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPE C
Sbjct: 1 MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPETSFNKC 52
>gi|50593027 enoyl Coenzyme A hydratase domain containing 1 isoform
2 [Homo sapiens]
Length = 145
Score = 94.7 bits (234), Expect = 6e-20
Identities = 47/52 (90%), Positives = 47/52 (90%)
Query: 1 MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVC 52
MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPE C
Sbjct: 76 MMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKSLGTPETSFNKC 127
>gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase
precursor [Homo sapiens]
Length = 339
Score = 89.4 bits (220), Expect = 2e-18
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 4/203 (1%)
Query: 2 MLQLLEKVIE-LENWTEGKGLIVRG-AKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTL 59
++++L K ++ L++ + + +I+R F +G+DL + + E G V ++ +
Sbjct: 107 LIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSK-IRAVI 165
Query: 60 TRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLV 119
LP+ ++A + G ALGGG E ACD R+ +K+ V ++ IIP GGT RL
Sbjct: 166 NDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLP 225
Query: 120 EIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDE-TKSLEEAQEWLKQFIQGPPEV 178
IG A +++ A LD K A +G++ VL+ + E + +A + ++F+ P
Sbjct: 226 RAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVA 285
Query: 179 IRALKKSVCSGRELYLEEALQNE 201
+R K ++ G E+ L L E
Sbjct: 286 MRVAKLAINQGMEVDLVTGLAIE 308
>gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase [Homo sapiens]
Length = 723
Score = 64.3 bits (155), Expect = 8e-11
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Query: 19 KGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWAL 78
K +++ GA+ FS+G+D+ + T + + + + R VA +QG A
Sbjct: 46 KAIVICGAEGKFSAGADIRGFSAPRT------FGLTLGHVVDEIQRNEKPVVAAIQGMAF 99
Query: 79 GGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLD 138
GGG E C +R+ E+++ +G++P GT L + G AL +++ ++
Sbjct: 100 GGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRIL 159
Query: 139 SKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCS 188
+ AL +G++++V+ S +EEA + ++ P E R K + S
Sbjct: 160 ADEALKLGILDKVVNSD----PVEEAIRFAQRVSDQPLESRRLCNKPIQS 205
>gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1
precursor [Homo sapiens]
Length = 290
Score = 62.0 bits (149), Expect = 4e-10
Identities = 47/186 (25%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 21 LIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGG 80
+++ G F++G+D+ +++L + + + + LT+ ++ P+I A V G+A GG
Sbjct: 85 IVLTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQ-VKKPVI--AAVNGYAFGG 141
Query: 81 GAEFTTACDFRLMTPESKIRFVHKEM--GIIPSWGGTTRLVEIIGSRQALKVLSGALKLD 138
G E CD ++ K +F E+ G IP GGT RL +G A++++ ++
Sbjct: 142 GCELAMMCD--IIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRIS 199
Query: 139 SKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEAL 198
+++A G+V ++ +EEA + ++ V+ K+SV + E+ L E
Sbjct: 200 AQDAKQAGLVSKICPVE---TLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGS 256
Query: 199 QNERDL 204
+ E+ L
Sbjct: 257 KLEKKL 262
>gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein
[Homo sapiens]
Length = 328
Score = 60.8 bits (146), Expect = 9e-10
Identities = 48/206 (23%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 4 QLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVKS--LGTPEDGMA-VCMFMQNTLT 60
+++E ++ + + +++ GA F++G DL + S L D +A + ++++ +T
Sbjct: 88 EMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARISWYLRDIIT 147
Query: 61 RFM-------RLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWG 113
R+ R P +A V G +GGG + TACD R ++ + ++G+ G
Sbjct: 148 RYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVG 207
Query: 114 GTTRLVEIIGSRQALKVLS-GALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFI 172
RL ++IG++ + L+ A K+ + AL G+V V D+ L+ A +
Sbjct: 208 TLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVF--PDKEVMLDAALALAAEIS 265
Query: 173 QGPPEVIRALKKSVCSGRELYLEEAL 198
P +++ K ++ R+ + E+L
Sbjct: 266 SKSPVAVQSTKVNLLYSRDHSVAESL 291
>gi|20127408 mitochondrial trifunctional protein, alpha subunit
precursor [Homo sapiens]
Length = 763
Score = 57.8 bits (138), Expect = 8e-09
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 21 LIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGG 80
+++ F +G+D+N + + T ++ + Q + + + VA + G LGG
Sbjct: 89 VLISSKPGCFIAGADINMLAACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGG 148
Query: 81 GAEFTTACDFRLMTPESKIRFVHKE--MGIIPSWGGTTRLVEIIGSRQALKVLSGALKLD 138
G E +C +R+ T + K E +G +P GGT RL +++G AL ++ +
Sbjct: 149 GLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIR 208
Query: 139 SKNALNIGMVEEVLQ------SSDETKSLEEAQEWLKQFIQG 174
+ A +G+V+++++ E +++E +E F +G
Sbjct: 209 ADRAKKMGLVDQLVEPLGPGLKPPEERTIEYLEEVAITFAKG 250
>gi|221307494 chromodomain protein, Y chromosome-like isoform a
[Homo sapiens]
Length = 544
Score = 53.1 bits (126), Expect = 2e-07
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 3/166 (1%)
Query: 55 MQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGG 114
++N + F++ + V G A+G GA CD ++ + + G P
Sbjct: 373 IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS 432
Query: 115 TTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQG 174
T +I+G A ++L KL ++ A G+V +V T +E +K+
Sbjct: 433 TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFT---QEVMVRIKELASC 489
Query: 175 PPEVIRALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAK 220
P V+ K V ++ LE+A + E ++L +WG ++++ K
Sbjct: 490 NPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLK 535
>gi|221136756 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 53.1 bits (126), Expect = 2e-07
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 3/166 (1%)
Query: 55 MQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGG 114
++N + F++ + V G A+G GA CD ++ + + G P
Sbjct: 241 IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS 300
Query: 115 TTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQG 174
T +I+G A ++L KL ++ A G+V +V T +E +K+
Sbjct: 301 TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFT---QEVMVRIKELASC 357
Query: 175 PPEVIRALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAK 220
P V+ K V ++ LE+A + E ++L +WG ++++ K
Sbjct: 358 NPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLK 403
>gi|221136753 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 53.1 bits (126), Expect = 2e-07
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 3/166 (1%)
Query: 55 MQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGG 114
++N + F++ + V G A+G GA CD ++ + + G P
Sbjct: 241 IRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCS 300
Query: 115 TTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQG 174
T +I+G A ++L KL ++ A G+V +V T +E +K+
Sbjct: 301 TVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFT---QEVMVRIKELASC 357
Query: 175 PPEVIRALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAK 220
P V+ K V ++ LE+A + E ++L +WG ++++ K
Sbjct: 358 NPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLK 403
>gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b
[Homo sapiens]
Length = 554
Score = 50.4 bits (119), Expect = 1e-06
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 6/207 (2%)
Query: 17 EGKGLIVRGAKNTFSSGSDLNA-VKSLGTPEDGMAVCMF--MQNTLTRFMRLPLISVALV 73
+ K ++ A + F G D VK L + ++ M ++N + F++ V V
Sbjct: 328 DSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSV 387
Query: 74 QGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSG 133
G A+G GA CD ++ + + G P + +++G A ++L
Sbjct: 388 NGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIA 447
Query: 134 ALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELY 193
KL ++ A G+V +V + T +E +K+ P V+ K V +L
Sbjct: 448 GRKLTAREACAKGLVSQVFLTGTFT---QEVMIQIKELASYNPIVLEECKALVRCNIKLE 504
Query: 194 LEEALQNERDLLGTVWGGPANLEAIAK 220
LE+A + E ++L +W +E++ K
Sbjct: 505 LEQANERECEVLRKIWSSAQGIESMLK 531
>gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform
a [Homo sapiens]
Length = 540
Score = 50.4 bits (119), Expect = 1e-06
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 6/207 (2%)
Query: 17 EGKGLIVRGAKNTFSSGSDLNA-VKSLGTPEDGMAVCMF--MQNTLTRFMRLPLISVALV 73
+ K ++ A + F G D VK L + ++ M ++N + F++ V V
Sbjct: 328 DSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSV 387
Query: 74 QGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSG 133
G A+G GA CD ++ + + G P + +++G A ++L
Sbjct: 388 NGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIA 447
Query: 134 ALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELY 193
KL ++ A G+V +V + T +E +K+ P V+ K V +L
Sbjct: 448 GRKLTAREACAKGLVSQVFLTGTFT---QEVMIQIKELASYNPIVLEECKALVRCNIKLE 504
Query: 194 LEEALQNERDLLGTVWGGPANLEAIAK 220
LE+A + E ++L +W +E++ K
Sbjct: 505 LEQANERECEVLRKIWSSAQGIESMLK 531
>gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo
sapiens]
Length = 554
Score = 50.4 bits (119), Expect = 1e-06
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 6/207 (2%)
Query: 17 EGKGLIVRGAKNTFSSGSDLNA-VKSLGTPEDGMAVCMF--MQNTLTRFMRLPLISVALV 73
+ K ++ A + F G D VK L + ++ M ++N + F++ V V
Sbjct: 328 DSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSV 387
Query: 74 QGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSG 133
G A+G GA CD ++ + + G P + +++G A ++L
Sbjct: 388 NGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIA 447
Query: 134 ALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELY 193
KL ++ A G+V +V + T +E +K+ P V+ K V +L
Sbjct: 448 GRKLTAREACAKGLVSQVFLTGTFT---QEVMIQIKELASYNPIVLEECKALVRCNIKLE 504
Query: 194 LEEALQNERDLLGTVWGGPANLEAIAK 220
LE+A + E ++L +W +E++ K
Sbjct: 505 LEQANERECEVLRKIWSSAQGIESMLK 531
>gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo
sapiens]
Length = 540
Score = 50.4 bits (119), Expect = 1e-06
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 6/207 (2%)
Query: 17 EGKGLIVRGAKNTFSSGSDLNA-VKSLGTPEDGMAVCMF--MQNTLTRFMRLPLISVALV 73
+ K ++ A + F G D VK L + ++ M ++N + F++ V V
Sbjct: 328 DSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSV 387
Query: 74 QGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSG 133
G A+G GA CD ++ + + G P + +++G A ++L
Sbjct: 388 NGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIA 447
Query: 134 ALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELY 193
KL ++ A G+V +V + T +E +K+ P V+ K V +L
Sbjct: 448 GRKLTAREACAKGLVSQVFLTGTFT---QEVMIQIKELASYNPIVLEECKALVRCNIKLE 504
Query: 194 LEEALQNERDLLGTVWGGPANLEAIAK 220
LE+A + E ++L +W +E++ K
Sbjct: 505 LEQANERECEVLRKIWSSAQGIESMLK 531
>gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Homo
sapiens]
Length = 302
Score = 48.1 bits (113), Expect = 6e-06
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
Query: 2 MLQLLEKVIELENWTEGKGLIVRGAK-NTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLT 60
+ +L+ + +LEN +G+I+ + FS+G DL + +P +Q
Sbjct: 75 LTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGR-SPAHYAGYWKAVQELWL 133
Query: 61 RFMRLPLISVALVQGWALGGGAEFTTACDFRLM--TPESKIRFVHKEMGIIPSWGGTTRL 118
R + L+ V+ + G GG CD+R++ P I ++GII + L
Sbjct: 134 RLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTL 193
Query: 119 VEIIGSRQALKVLSGALKLDSKNALNIGMVEEVL-QSSDETKSLEEAQEWL 168
IG R A + L L AL +G+V++V+ + ++ +L +W+
Sbjct: 194 ENTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWM 244
>gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]
Length = 541
Score = 46.6 bits (109), Expect = 2e-05
Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Query: 55 MQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGG 114
++N + F++ V V G A+G GA CD ++ + + G P
Sbjct: 370 IKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCS 429
Query: 115 TTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQG 174
+ +++G A ++L KL ++ A G+V +V + T +E +K+
Sbjct: 430 SITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFT---QEVMIQIKELASY 486
Query: 175 PPEVIRALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAK 220
V+ K V +L LE+A + E ++L +W +E++ K
Sbjct: 487 NAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLK 532
>gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]
Length = 541
Score = 46.6 bits (109), Expect = 2e-05
Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Query: 55 MQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGG 114
++N + F++ V V G A+G GA CD ++ + + G P
Sbjct: 370 IKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCS 429
Query: 115 TTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQG 174
+ +++G A ++L KL ++ A G+V +V + T +E +K+
Sbjct: 430 SITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFT---QEVMIQIKELASY 486
Query: 175 PPEVIRALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAK 220
V+ K V +L LE+A + E ++L +W +E++ K
Sbjct: 487 NAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLK 532
>gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens]
Length = 506
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/205 (20%), Positives = 87/205 (42%), Gaps = 6/205 (2%)
Query: 17 EGKGLIVRGAKNTFSSGSDLNAV---KSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALV 73
+ K L++ + F SG D + + S ++ + +++ + F++ V +
Sbjct: 294 DSKLLLLSAVGSVFCSGLDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAI 353
Query: 74 QGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSG 133
G ALG GA CD + ++ + + + + P+ + +I+G A ++L
Sbjct: 354 NGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFC 413
Query: 134 ALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELY 193
KL ++ A + G+V +V T +E +K+ V+ K V S +
Sbjct: 414 GRKLTAQEACSRGLVSQVFW---PTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSV 470
Query: 194 LEEALQNERDLLGTVWGGPANLEAI 218
LE+ + E +L +W L+++
Sbjct: 471 LEDVNEKECLMLKQLWSSSKGLDSL 495
>gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2
[Homo sapiens]
Length = 338
Score = 38.9 bits (89), Expect = 0.004
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 9/168 (5%)
Query: 1 MMLQLLEKVIELENWTEGKGLIVRGAKN-TFSSGSDLNAVKSLGTPEDGMAVCMF----M 55
M+ Q+ ++ + E E +I++GA F +G D+ + + +A F M
Sbjct: 64 MIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYM 123
Query: 56 QNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGT 115
N + P VAL+ G +GGG + FR+ T + +G+ P GG
Sbjct: 124 LNNAVGSCQKPY--VALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGG 181
Query: 116 TRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEE 163
L + G L+G +L ++ G+ + S++ LEE
Sbjct: 182 YFLPRLQGKLGYFLALTG-FRLKGRDVYRAGIATHFV-DSEKLAMLEE 227
>gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1
[Homo sapiens]
Length = 386
Score = 38.9 bits (89), Expect = 0.004
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 9/168 (5%)
Query: 1 MMLQLLEKVIELENWTEGKGLIVRGAKN-TFSSGSDLNAVKSLGTPEDGMAVCMF----M 55
M+ Q+ ++ + E E +I++GA F +G D+ + + +A F M
Sbjct: 64 MIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYM 123
Query: 56 QNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGT 115
N + P VAL+ G +GGG + FR+ T + +G+ P GG
Sbjct: 124 LNNAVGSCQKPY--VALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGG 181
Query: 116 TRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEE 163
L + G L+G +L ++ G+ + S++ LEE
Sbjct: 182 YFLPRLQGKLGYFLALTG-FRLKGRDVYRAGIATHFV-DSEKLAMLEE 227
>gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Homo
sapiens]
Length = 261
Score = 36.2 bits (82), Expect = 0.023
Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 34/200 (17%)
Query: 4 QLLEKVIELENWTEGKGLIVR-GAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLTRF 62
+LLE + +L + + L+ R G K F +G+DL + + E G+ V
Sbjct: 63 ELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGVFV----------- 111
Query: 63 MRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVEII 122
RL + + +G + G++P GGT RL +
Sbjct: 112 QRLRGLMNDIASSAVMG---------------------LIETTRGLLPGAGGTQRLPRCL 150
Query: 123 GSRQALKVLSGALKLDSKNALNIGMVEE-VLQSSDETKSLEEAQEWLKQFIQGPPEVIRA 181
G A +++ +L A +G+V V Q+ + + + A+ ++ + P +R
Sbjct: 151 GVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEGDAAYQRARALAQEILPQAPIAVRL 210
Query: 182 LKKSVCSGRELYLEEALQNE 201
K ++ G E+ + + E
Sbjct: 211 GKVAIDRGTEVDIASGMAIE 230
>gi|35493868 otoferlin isoform b [Homo sapiens]
Length = 1230
Score = 31.6 bits (70), Expect = 0.58
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 12/113 (10%)
Query: 110 PSWGGTTRLVEIIGSRQALKVLSGALKLD--SKNALNIGMVEEVLQSSDETKSLEEAQE- 166
PSW T +V + +K L +KLD S+ + + + EE + + K E E
Sbjct: 492 PSWNTTGEVVVTMEPEVPIKKLETMVKLDATSEAVVKVDVAEEEKEKKKKKKGTAEEPEE 551
Query: 167 ---------WLKQFIQGPPEVIRALKKSVCSGRELYLEEALQNERDLLGTVWG 210
W ++ + L++ SG +L +E + N L G++ G
Sbjct: 552 EEPDESMLDWWSKYFASIDTMKEQLRQQEPSGIDLEEKEEVDNTEGLKGSMKG 604
>gi|35493860 otoferlin isoform d [Homo sapiens]
Length = 1230
Score = 31.6 bits (70), Expect = 0.58
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 12/113 (10%)
Query: 110 PSWGGTTRLVEIIGSRQALKVLSGALKLD--SKNALNIGMVEEVLQSSDETKSLEEAQE- 166
PSW T +V + +K L +KLD S+ + + + EE + + K E E
Sbjct: 492 PSWNTTGEVVVTMEPEVPIKKLETMVKLDATSEAVVKVDVAEEEKEKKKKKKGTAEEPEE 551
Query: 167 ---------WLKQFIQGPPEVIRALKKSVCSGRELYLEEALQNERDLLGTVWG 210
W ++ + L++ SG +L +E + N L G++ G
Sbjct: 552 EEPDESMLDWWSKYFASIDTMKEQLRQQEPSGIDLEEKEEVDNTEGLKGSMKG 604
>gi|26051246 tumor necrosis factor ligand superfamily, member 13
isoform beta proprotein [Homo sapiens]
Length = 234
Score = 30.4 bits (67), Expect = 1.3
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 63 MRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTR 117
+R P +SVAL W GA AC L+T +++++ + +E+ + GG ++
Sbjct: 22 VREPALSVALWLSWGAALGA---VACAMALLTQQTELQSLRREVSRLQGTGGPSQ 73
>gi|4507599 tumor necrosis factor ligand superfamily, member 13
isoform alpha proprotein [Homo sapiens]
Length = 250
Score = 30.4 bits (67), Expect = 1.3
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 63 MRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTR 117
+R P +SVAL W GA AC L+T +++++ + +E+ + GG ++
Sbjct: 22 VREPALSVALWLSWGAALGA---VACAMALLTQQTELQSLRREVSRLQGTGGPSQ 73
>gi|26051248 tumor necrosis factor ligand superfamily, member 13
isoform gamma proprotein [Homo sapiens]
Length = 247
Score = 30.4 bits (67), Expect = 1.3
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 63 MRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTR 117
+R P +SVAL W GA AC L+T +++++ + +E+ + GG ++
Sbjct: 22 VREPALSVALWLSWGAALGA---VACAMALLTQQTELQSLRREVSRLQGTGGPSQ 73
>gi|169216272 PREDICTED: hypothetical protein [Homo sapiens]
Length = 753
Score = 30.4 bits (67), Expect = 1.3
Identities = 37/127 (29%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 115 TTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQ- 173
TT + + + L V S + + + ALN+ V + QSS E S +A LK
Sbjct: 278 TTEVPNTLKTLSTLNVPSTSETVSTSKALNMSKVSSISQSSLEDSSTSKATTTLKTLSSS 337
Query: 174 ---GPPEVIRALK-----------KSVCSGRELYLEEALQNERDLLG--TVWGGPANLEA 217
G +V RALK + YLE L N + LG WG AN
Sbjct: 338 EALGVSKVWRALKGLSTFKPYRTLNCLIMFEHGYLEYKLVNYDNPLGYALFWGPKAN--- 394
Query: 218 IAKKGKF 224
+K KF
Sbjct: 395 --QKNKF 399
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,210,259
Number of Sequences: 37866
Number of extensions: 329056
Number of successful extensions: 950
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 910
Number of HSP's gapped (non-prelim): 44
length of query: 226
length of database: 18,247,518
effective HSP length: 99
effective length of query: 127
effective length of database: 14,498,784
effective search space: 1841345568
effective search space used: 1841345568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.