TNFSF13 29597

Name: TNFSF13	Sequence: fasta or formatted (250aa)		NCBI GI: 4507599
Description: tumor necrosis factor ligand superfamily, member 13 isoform alpha proprotein		Referenced in: TNF and Related Signals
Other entries for this name: alt prot [234aa] tumor necrosis factor ligand superfamily, member 13 isoform beta ... alt prot [247aa] tumor necrosis factor ligand superfamily, member 13 isoform gamma...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 21 2 C cysteine 1.2 3 1 D aspartate 3.2 8 2 E glutamate 4.4 11 1 F phenylalanine 2.8 7 1 G glycine 9.6 24 2 H histidine 2.4 6 1 I isoleucine 2.4 6 2 K lysine 3.2 8 2 L leucine 11.2 28 2 M methionine 2.4 6 1 N asparagine 2.4 6 1 P proline 6.4 16 2 Q glutamine 8.0 20 2 R arginine 7.6 19 2 S serine 8.8 22 2 T threonine 4.0 10 1 V valine 7.2 18 2 W tryptophan 2.0 5 1 Y tyrosine 2.4 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tumor necrosis factor ligand superfamily, member 13 i... TNFSF13 0.985 tumor necrosis factor ligand superfamily, member 13 ... TNFSF13 0.911 tumor necrosis factor ligand superfamily, member 13 ... TNFSF12-TNFSF13 0.640 TNFSF12-TNFSF13 protein TNFSF13B 0.137 tumor necrosis factor superfamily, member 13b isoform... TNFSF13B 0.121 tumor necrosis factor superfamily, member 13b isofo... EDA 0.048 ectodysplasin A isoform EDA-A1 EDA 0.046 ectodysplasin A isoform EDA-A2 TNF 0.025 tumor necrosis factor alpha SUPT6H 0.017 suppressor of Ty 6 homolog LTA 0.012 lymphotoxin alpha precursor LTA 0.012 lymphotoxin alpha precursor ECHDC1 0.010 enoyl Coenzyme A hydratase domain containing 1 isof... ECHDC1 0.010 enoyl Coenzyme A hydratase domain containing 1 isof... ECHDC1 0.010 enoyl Coenzyme A hydratase domain containing 1 isof... LOC100293792 0.010 PREDICTED: hypothetical protein LOC100290918 0.010 PREDICTED: hypothetical protein XP_002346524 LOC100288640 0.010 PREDICTED: hypothetical protein XP_002342362 SLCO2B1 0.010 solute carrier organic anion transporter family, me... SLCO2B1 0.010 solute carrier organic anion transporter family, me... SLCO2B1 0.010 solute carrier organic anion transporter family, memb... BRCA1 0.010 breast cancer 1, early onset isoform 3 BRCA1 0.010 breast cancer 1, early onset isoform 1 USP53 0.010 ubiquitin specific protease 53 EOMES 0.010 eomesodermin FREM1 0.010 FRAS1 related extracellular matrix 1 MYH14 0.008 myosin, heavy chain 14 isoform 1 MYH14 0.008 myosin, heavy chain 14 isoform 2 MYH14 0.008 myosin, heavy chain 14 isoform 3 RBM39 0.008 RNA binding motif protein 39 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.