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Search of human proteins with 157427661
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157427661 hypothetical protein LOC205147 [Homo sapiens]
(861 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157427665 hypothetical protein LOC205147 [Homo sapiens] 1763 0.0
gi|157427663 hypothetical protein LOC205147 [Homo sapiens] 1763 0.0
gi|157427661 hypothetical protein LOC205147 [Homo sapiens] 1763 0.0
gi|157427667 hypothetical protein LOC205147 [Homo sapiens] 1763 0.0
gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens] 112 1e-24
gi|40288199 hypothetical protein LOC219287 isoform 2 [Homo sapiens] 84 4e-16
gi|124244056 family with sequence similarity 123B [Homo sapiens] 79 1e-14
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 44 5e-04
gi|91208420 bassoon protein [Homo sapiens] 44 8e-04
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 42 0.002
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 41 0.005
gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens] 41 0.005
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 41 0.005
gi|169217315 PREDICTED: hypothetical protein [Homo sapiens] 40 0.007
gi|113430659 PREDICTED: hypothetical protein [Homo sapiens] 40 0.007
gi|113430177 PREDICTED: hypothetical protein [Homo sapiens] 40 0.007
gi|113430175 PREDICTED: hypothetical protein [Homo sapiens] 40 0.007
gi|38373682 pleckstrin homology domain containing family G membe... 40 0.007
gi|111154084 pleckstrin homology domain containing family G memb... 40 0.007
gi|111154088 pleckstrin homology domain containing family G memb... 40 0.007
gi|111154080 pleckstrin homology domain containing family G memb... 40 0.007
gi|111154078 pleckstrin homology domain containing family G memb... 40 0.007
gi|6912492 mitogen-activated protein kinase 8 interacting protei... 40 0.007
gi|7706537 mitogen-activated protein kinase 8 interacting protei... 40 0.007
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 39 0.016
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 39 0.021
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 39 0.021
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 39 0.021
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 39 0.021
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 39 0.021
>gi|157427665 hypothetical protein LOC205147 [Homo sapiens]
Length = 861
Score = 1763 bits (4567), Expect = 0.0
Identities = 861/861 (100%), Positives = 861/861 (100%)
Query: 1 MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQ 60
MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQ
Sbjct: 1 MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQ 60
Query: 61 EYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGS 120
EYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGS
Sbjct: 61 EYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGS 120
Query: 121 PGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAE 180
PGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAE
Sbjct: 121 PGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAE 180
Query: 181 GKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVAS 240
GKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVAS
Sbjct: 181 GKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVAS 240
Query: 241 LQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQ 300
LQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQ
Sbjct: 241 LQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQ 300
Query: 301 NEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRS 360
NEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRS
Sbjct: 301 NEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRS 360
Query: 361 GSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD 420
GSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD
Sbjct: 361 GSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD 420
Query: 421 ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLS 480
ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLS
Sbjct: 421 ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLS 480
Query: 481 QGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAP 540
QGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAP
Sbjct: 481 QGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAP 540
Query: 541 TEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDAS 600
TEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDAS
Sbjct: 541 TEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDAS 600
Query: 601 REEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP 660
REEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP
Sbjct: 601 REEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP 660
Query: 661 GHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQK 720
GHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQK
Sbjct: 661 GHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQK 720
Query: 721 QSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTE 780
QSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTE
Sbjct: 721 QSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTE 780
Query: 781 AVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE 840
AVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE
Sbjct: 781 AVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE 840
Query: 841 GLLCGQPEVGASGPAMAEPHL 861
GLLCGQPEVGASGPAMAEPHL
Sbjct: 841 GLLCGQPEVGASGPAMAEPHL 861
>gi|157427663 hypothetical protein LOC205147 [Homo sapiens]
Length = 861
Score = 1763 bits (4567), Expect = 0.0
Identities = 861/861 (100%), Positives = 861/861 (100%)
Query: 1 MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQ 60
MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQ
Sbjct: 1 MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQ 60
Query: 61 EYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGS 120
EYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGS
Sbjct: 61 EYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGS 120
Query: 121 PGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAE 180
PGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAE
Sbjct: 121 PGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAE 180
Query: 181 GKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVAS 240
GKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVAS
Sbjct: 181 GKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVAS 240
Query: 241 LQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQ 300
LQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQ
Sbjct: 241 LQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQ 300
Query: 301 NEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRS 360
NEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRS
Sbjct: 301 NEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRS 360
Query: 361 GSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD 420
GSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD
Sbjct: 361 GSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD 420
Query: 421 ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLS 480
ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLS
Sbjct: 421 ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLS 480
Query: 481 QGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAP 540
QGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAP
Sbjct: 481 QGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAP 540
Query: 541 TEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDAS 600
TEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDAS
Sbjct: 541 TEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDAS 600
Query: 601 REEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP 660
REEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP
Sbjct: 601 REEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP 660
Query: 661 GHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQK 720
GHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQK
Sbjct: 661 GHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQK 720
Query: 721 QSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTE 780
QSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTE
Sbjct: 721 QSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTE 780
Query: 781 AVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE 840
AVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE
Sbjct: 781 AVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE 840
Query: 841 GLLCGQPEVGASGPAMAEPHL 861
GLLCGQPEVGASGPAMAEPHL
Sbjct: 841 GLLCGQPEVGASGPAMAEPHL 861
>gi|157427661 hypothetical protein LOC205147 [Homo sapiens]
Length = 861
Score = 1763 bits (4567), Expect = 0.0
Identities = 861/861 (100%), Positives = 861/861 (100%)
Query: 1 MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQ 60
MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQ
Sbjct: 1 MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQ 60
Query: 61 EYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGS 120
EYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGS
Sbjct: 61 EYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGS 120
Query: 121 PGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAE 180
PGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAE
Sbjct: 121 PGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAE 180
Query: 181 GKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVAS 240
GKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVAS
Sbjct: 181 GKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVAS 240
Query: 241 LQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQ 300
LQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQ
Sbjct: 241 LQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQ 300
Query: 301 NEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRS 360
NEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRS
Sbjct: 301 NEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRS 360
Query: 361 GSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD 420
GSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD
Sbjct: 361 GSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD 420
Query: 421 ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLS 480
ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLS
Sbjct: 421 ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLS 480
Query: 481 QGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAP 540
QGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAP
Sbjct: 481 QGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAP 540
Query: 541 TEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDAS 600
TEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDAS
Sbjct: 541 TEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDAS 600
Query: 601 REEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP 660
REEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP
Sbjct: 601 REEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP 660
Query: 661 GHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQK 720
GHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQK
Sbjct: 661 GHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQK 720
Query: 721 QSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTE 780
QSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTE
Sbjct: 721 QSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTE 780
Query: 781 AVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE 840
AVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE
Sbjct: 781 AVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE 840
Query: 841 GLLCGQPEVGASGPAMAEPHL 861
GLLCGQPEVGASGPAMAEPHL
Sbjct: 841 GLLCGQPEVGASGPAMAEPHL 861
>gi|157427667 hypothetical protein LOC205147 [Homo sapiens]
Length = 861
Score = 1763 bits (4567), Expect = 0.0
Identities = 861/861 (100%), Positives = 861/861 (100%)
Query: 1 MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQ 60
MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQ
Sbjct: 1 MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQ 60
Query: 61 EYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGS 120
EYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGS
Sbjct: 61 EYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGS 120
Query: 121 PGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAE 180
PGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAE
Sbjct: 121 PGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAE 180
Query: 181 GKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVAS 240
GKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVAS
Sbjct: 181 GKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVAS 240
Query: 241 LQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQ 300
LQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQ
Sbjct: 241 LQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQ 300
Query: 301 NEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRS 360
NEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRS
Sbjct: 301 NEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRS 360
Query: 361 GSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD 420
GSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD
Sbjct: 361 GSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD 420
Query: 421 ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLS 480
ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLS
Sbjct: 421 ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLS 480
Query: 481 QGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAP 540
QGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAP
Sbjct: 481 QGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAP 540
Query: 541 TEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDAS 600
TEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDAS
Sbjct: 541 TEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDAS 600
Query: 601 REEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP 660
REEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP
Sbjct: 601 REEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP 660
Query: 661 GHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQK 720
GHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQK
Sbjct: 661 GHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQK 720
Query: 721 QSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTE 780
QSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTE
Sbjct: 721 QSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTE 780
Query: 781 AVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE 840
AVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE
Sbjct: 781 AVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE 840
Query: 841 GLLCGQPEVGASGPAMAEPHL 861
GLLCGQPEVGASGPAMAEPHL
Sbjct: 841 GLLCGQPEVGASGPAMAEPHL 861
>gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens]
Length = 671
Score = 112 bits (281), Expect = 1e-24
Identities = 131/459 (28%), Positives = 183/459 (39%), Gaps = 112/459 (24%)
Query: 4 KRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWS--VLPGGQQRPHS---EKGPQASPS 58
KRG + S ++ H K D A A A EG P +LPG E+ P+A+
Sbjct: 191 KRGLRGLFSGMRW-HRK--DKRAKAEAAEGRAPGGGLILPGSLTASLECVKEETPRAARE 247
Query: 59 AQEYDRCPNKGAQLDPKGGPAA----LCGATFKPVRKCKTHDSMSGAGRATAATGQLVGS 114
+E P++ A DP G PA A P R C+ + ++ G A G
Sbjct: 248 PEE----PSQDAPRDPAGEPAGGEEVPAPADRAPARSCREAEGLAHPGDTGARGEDAAGH 303
Query: 115 ASFPGSPGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDL 174
PG R + +P K++P
Sbjct: 304 RRAEPGPGEVRTAEDASRTGAVP-----VKTVPL-------------------------- 332
Query: 175 ASLAAEGKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRAL 234
+ +EG S +P P DP A + P P D +C +
Sbjct: 333 --VDSEGGSGRAPAAP-DP------ASVDPPSDPSADRIC------------------LM 365
Query: 235 CEDVASLQSFDSLTGCGEVFAD--ESSVPSLELN-EGPESPTQAAQGLESKVPRG-PLQG 290
DV SL+SFDSLTGCG++ AD E + PS + + GP P L K P QG
Sbjct: 366 FSDVTSLKSFDSLTGCGDIIADQEEEAGPSCDKHVPGPGKPA-----LSKKNPGVVAYQG 420
Query: 291 SVEQLASPAQNEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAEL 350
E++ASP + + + FWD ++++ Q GP +G + + L+T + E
Sbjct: 421 GGEEMASPDEVDDTYLQEFWDMLSQTEEQ------GP--EPQEGAAKVAAALETKVVPET 472
Query: 351 PLCPCRDPRSGSKASSI----------------DTGTPKSEQPESVSTSDEGYYDSFSPG 394
P R + ASS+ + P+ EQ E V SDEGY+DS +PG
Sbjct: 473 PK-DTRCVEAAKDASSVKRRRLNRIPIEPHPKEEPKHPEKEQQEGVPNSDEGYWDSTTPG 531
Query: 395 LEEDKKEAESPGTPAATFPRDSYSGDALYELFHDPSEGP 433
EED S A PRDSYSGDALY+L+ DP P
Sbjct: 532 PEED----SSSSGKKAGIPRDSYSGDALYDLYADPDGSP 566
>gi|40288199 hypothetical protein LOC219287 isoform 2 [Homo sapiens]
Length = 552
Score = 84.3 bits (207), Expect = 4e-16
Identities = 69/205 (33%), Positives = 96/205 (46%), Gaps = 38/205 (18%)
Query: 249 GCGEVFAD--ESSVPSLELN-EGPESPTQAAQGLESKVPRG-PLQGSVEQLASPAQNEAS 304
GCG++ AD E + PS + + GP P L K P QG E++ASP + + +
Sbjct: 261 GCGDIIADQEEEAGPSCDKHVPGPGKPA-----LSKKNPGVVAYQGGGEEMASPDEVDDT 315
Query: 305 DFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRSGSKA 364
FWD ++++ Q GP +G + + L+T + E P R + A
Sbjct: 316 YLQEFWDMLSQTEEQ------GP--EPQEGAAKVAAALETKVVPETPK-DTRCVEAAKDA 366
Query: 365 SSI----------------DTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTP 408
SS+ + P+ EQ E V SDEGY+DS +PG EED S
Sbjct: 367 SSVKRRRLNRIPIEPHPKEEPKHPEKEQQEGVPNSDEGYWDSTTPGPEED----SSSSGK 422
Query: 409 AATFPRDSYSGDALYELFHDPSEGP 433
A PRDSYSGDALY+L+ DP P
Sbjct: 423 KAGIPRDSYSGDALYDLYADPDGSP 447
>gi|124244056 family with sequence similarity 123B [Homo sapiens]
Length = 1135
Score = 79.3 bits (194), Expect = 1e-14
Identities = 71/229 (31%), Positives = 90/229 (39%), Gaps = 44/229 (19%)
Query: 237 DVASLQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLA 296
DV SL+SFDSLTGCG++ A E + S+ + G + QG E++A
Sbjct: 315 DVTSLKSFDSLTGCGDIIA-EQDMDSMTDSMASGGQRANRDGTKRSSCLVTYQGGGEEMA 373
Query: 297 SP-----------------------AQNEASDFTRFWDSVNRSVRQQQRALLGPWLS-GP 332
P + E D W++ R P S G
Sbjct: 374 LPDDDDEEEEEEEEVELEEEEEEVKEEEEDDDLEYLWETAQMYPRPNMNLGYHPTTSPGH 433
Query: 333 QGTDRDQSRLDTAGLAELPLCPCRDPRSGSKASSIDTGTPKSEQPESVSTSDEGYYDSFS 392
G GLA L TP+S+Q ES SDEGYYDS +
Sbjct: 434 HGYMLLDPVRSYPGLAPGELL-----------------TPQSDQQESAPNSDEGYYDSTT 476
Query: 393 PGLEEDKKEAESPGTPAATFPRDSYSGDALYELFHDPSEGPLGPSPDDD 441
PG E+D EA PRDSYSGDALYE F++P + P DD
Sbjct: 477 PGFEDDSGEALGL-VRRDCLPRDSYSGDALYE-FYEPDDSLENSPPGDD 523
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 44.3 bits (103), Expect = 5e-04
Identities = 64/258 (24%), Positives = 78/258 (30%), Gaps = 41/258 (15%)
Query: 518 PRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGL 577
PR P PPG G P AP G + GG AP + PG G
Sbjct: 793 PRGSPGERGETGPPGPAGFPGAP--------GQNGEPGGKGERGAPGEKGEGGPPGVAGP 844
Query: 578 LAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPST 637
G A QG + RG G ++ A G N P P
Sbjct: 845 PGGSGPAGPPGPQGV----------KGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPG 894
Query: 638 WPCSQKEPGPPGVLGCFRGPWRPGHGGDTLDA-EPMLAGCVARVAALKISSNEQPPAAWP 696
S + GPPG G P PG G DA +P G P A P
Sbjct: 895 PSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKG--------------SPGAQGP 940
Query: 697 PRQDMGSGLFGQRWARGPDMLEQKQSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLR 756
P G+ G ARG + P M G P + + + LS R
Sbjct: 941 PGAPGPLGIAGITGARG--------LAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGER 992
Query: 757 VEPTGLGVQAWASVEDQP 774
P G+ A +P
Sbjct: 993 GPPGPQGLPGLAGTAGEP 1010
Score = 41.2 bits (95), Expect = 0.004
Identities = 96/385 (24%), Positives = 122/385 (31%), Gaps = 79/385 (20%)
Query: 327 PWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRSGSKASSIDTGTPKSEQPESVSTSDEG 386
P ++GP+G+ ++ G A P P ++ G K G P V+ G
Sbjct: 788 PGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGG 847
Query: 387 YYDSFSPGLEEDKKEAESPGTP-AATFP-RDSYSGDALYELFHDP--------SEGPLGP 436
+ PG + K E SPG P AA FP G P +GP GP
Sbjct: 848 SGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGP 907
Query: 437 SPDDDLCVSESLSGP--------------ALGT-----PLSICSFRVGAEENLAP----- 472
+ + S +SGP A G PL I GA P
Sbjct: 908 AGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGI-TGARGLAGPPGMPG 966
Query: 473 ---APGPDLLSQGFLQSSWK-GKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPA 528
+PGP QG S K G L S R P P+ P A
Sbjct: 967 PRGSPGP----QGVKGESGKPGANGL---------------SGERGPPGPQGLPGLAGTA 1007
Query: 529 APPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLA--------G 580
PG G P ++ L GR+G G +P HPG G + G
Sbjct: 1008 GEPGRDGNP--GSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRG 1065
Query: 581 ESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSG-KNKAPVPSTWP 639
ES G A SR A + RG + T +G K P P
Sbjct: 1066 ESGPAGPAGAPGPAGSRGAPGPQGPRG---------DKGETGERGAAGIKGHRGFPGN-P 1115
Query: 640 CSQKEPGPPGVLGCFRGPWRPGHGG 664
+ PGP G G P G G
Sbjct: 1116 GAPGSPGPAGQQGAIGSPGPAGPRG 1140
Score = 34.3 bits (77), Expect = 0.51
Identities = 37/153 (24%), Positives = 53/153 (34%), Gaps = 9/153 (5%)
Query: 512 LRRGPTPRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAH 571
LR G P P A PPG GA P G +G+ + GG +
Sbjct: 694 LRGGAGPPGPEGGKGAAGPPGPPGAAGTP-----GLQGMPGERGGLGSPGPKGDKGEPGG 748
Query: 572 PGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNK 631
PG G+ + G T G ++ G + GL + + G+
Sbjct: 749 PGADGVPGKDGPR--GPTGPIGPPGPAGQPGDKGEGGAPGLPGI--AGPRGSPGERGETG 804
Query: 632 APVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGG 664
P P+ +P + + G PG G P G GG
Sbjct: 805 PPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGG 837
Score = 33.5 bits (75), Expect = 0.87
Identities = 41/162 (25%), Positives = 55/162 (33%), Gaps = 15/162 (9%)
Query: 515 GPTPRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGT 574
G P PG+P P G GAP AP K G G + G + AP + PG
Sbjct: 647 GGPPGENGKPGEPG-PKGDAGAPGAPGGK--GDAGAPGERGPPGLAGAPGLRGGAGPPGP 703
Query: 575 TGLL----------AGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTT 624
G A + L G G L + + +G G +
Sbjct: 704 EGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGD--KGEPGGPGADGVPGKDGPR 761
Query: 625 DTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGGDT 666
+G P P+ P + E G PG+ G PG G+T
Sbjct: 762 GPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGET 803
Score = 32.7 bits (73), Expect = 1.5
Identities = 39/149 (26%), Positives = 48/149 (32%), Gaps = 13/149 (8%)
Query: 517 TPRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTG 576
+P P + G+P PPGSQG P G G + G V P + PG G
Sbjct: 541 SPGGPGSDGKPG-PPGSQGESGRP-----GPPGPSGPRGQPGVMGFPGPKGNDGAPGKNG 594
Query: 577 LLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPS 636
G G QG + E +G + T G P
Sbjct: 595 ERGGPG---GPGPQGPP----GKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTG 647
Query: 637 TWPCSQKEPGPPGVLGCFRGPWRPGHGGD 665
P +PG PG G P PG GD
Sbjct: 648 GPPGENGKPGEPGPKGDAGAPGAPGGKGD 676
Score = 32.0 bits (71), Expect = 2.5
Identities = 41/158 (25%), Positives = 52/158 (32%), Gaps = 12/158 (7%)
Query: 519 RAPPTPGQPAAPPGSQGAPRAPTEK-LGGREGLASDAGGATVCSAPS------RQELWAH 571
R PP P PG +G P + G G + G A + P +
Sbjct: 413 RGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGE 472
Query: 572 PGTTGL--LAGESKALG--GATQGTGTLS-RDASREEETRGHSEGLFSSMESAATSTTDT 626
PG GL AGE A G G G + + E G + ++ E
Sbjct: 473 PGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGG 532
Query: 627 SGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGG 664
G P P S +PGPPG G P PG G
Sbjct: 533 PGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSG 570
Score = 30.4 bits (67), Expect = 7.3
Identities = 44/166 (26%), Positives = 54/166 (32%), Gaps = 28/166 (16%)
Query: 515 GPT-PRAPPT---PGQPAAPPGSQGAPRAPTEK-LGGREGLASDAGGATVCSAPSRQELW 569
GP+ P PP P PA G G P P E+ L G G+ AG P +
Sbjct: 210 GPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAG------IPGFPGMK 263
Query: 570 AHPGTTGL-----------LAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMES 618
H G G L GE+ L G G + + E R G +
Sbjct: 264 GHRGFDGRNGEKGETGAPGLKGEN-GLPGENGAPGPMGPRGAPGERGRPGLPG-----AA 317
Query: 619 AATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGG 664
A G + P P P + PG PG G PG G
Sbjct: 318 GARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNG 363
Score = 30.0 bits (66), Expect = 9.6
Identities = 42/161 (26%), Positives = 50/161 (31%), Gaps = 26/161 (16%)
Query: 518 PRAPPTPGQ--PAAPPGSQGAPRAPTEK----------------LGGREGLASDAGGATV 559
P +P G+ PA PGS GAP E + G G + G A +
Sbjct: 344 PGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGI 403
Query: 560 CSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESA 619
AP PG G A + L G G A E RG
Sbjct: 404 PGAPGLMGARGPPGPAG--ANGAPGLRGGAGEPG--KNGAKGEPGPRGERGEAGIPGVPG 459
Query: 620 ATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP 660
A G P + P + E G PG FRGP P
Sbjct: 460 AKGEDGKDGSPGEPGANGLPGAAGERGAPG----FRGPAGP 496
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 43.5 bits (101), Expect = 8e-04
Identities = 77/300 (25%), Positives = 108/300 (36%), Gaps = 63/300 (21%)
Query: 185 PSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELL---ADASFGLCRALCEDVASL 241
P P++PG +AF P G G + S L AD+ L + +A L
Sbjct: 3096 PGASYPAEPGLPNQQAFRPTGHYAGQTPM--PTTQSTLFPVPADSRAPLQKPRQTSLADL 3153
Query: 242 QSFDSLTGCGEVFADE----SSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLAS 297
+ + EV A SS PS GP + QG +VPR +GSV Q +
Sbjct: 3154 EQ--KVPTNYEVIASPVVPMSSAPSETSYSGPAVSSGYEQGKVPEVPRAGDRGSVSQSPA 3211
Query: 298 PAQNEASDFTRF------------------WDSVNRSVRQQQRALLGPWLSGPQGTDRDQ 339
P S +T DS + + Q+ LGP SG G + +
Sbjct: 3212 PTYPSDSHYTSLEQNVPRNYVMIDDISELTKDSTSTAPDSQRLEPLGPGSSGRPGKEPGE 3271
Query: 340 SRLDTAGLAELPLCPCRDPRSGSKASSIDTGTPKSEQPESVSTSDEGYYDSFSP-GLEED 398
G+ + P PC R G +SE+ DS+ P G
Sbjct: 3272 -----PGVLDGPTLPCCYAR----------GEEESEE------------DSYDPRGKGGH 3304
Query: 399 KKEAESPGTPAATFPRDSYSGDALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLS 458
+ ES G PA+T Y GD+ Y H GP P S+SL+ A+ + S
Sbjct: 3305 LRSMESNGRPAST----HYYGDSDYR--HGARVEKYGPGPMGPKHPSKSLAPAAISSKRS 3358
Score = 38.1 bits (87), Expect = 0.035
Identities = 95/383 (24%), Positives = 140/383 (36%), Gaps = 74/383 (19%)
Query: 283 VPRGPLQGSVEQL--------ASPAQNEASDFTRFWDSVNRS-------VRQQQRALLGP 327
VP P G E L AS + SD D ++ S V+Q+ L
Sbjct: 652 VPEAPKGGEAEDLVGKPYSQDASRSPQSLSDTGYSSDGISSSQSEITGVVQQEVEQLDSA 711
Query: 328 WLSGPQGTDRDQSRLDTAGLAELPLCPCRD--PRSGSKASSIDTGTPKSEQPESVSTSDE 385
++GP S + G + PL + P SK S TG + ++P S+S + E
Sbjct: 712 GVTGPHPPS--PSEIHKVGSSMRPLLQAQGLAPSERSKPLSSGTGEEQKQRPHSLSITPE 769
Query: 386 GYY--DSFSPGLEEDKKEAE------SPGTPAATFPRDSYSGDALYELFHDPSEGPLGPS 437
+ + LEED+ AE T ++ D + ++ D SEG L P
Sbjct: 770 AFDSDEELEDILEEDEDSAEWRRRREQQDTAESS---DDFGSQLRHDYVEDSSEGGLSPL 826
Query: 438 PDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLKL 497
P PA L+ F + L + D L + +S +G L
Sbjct: 827 PPQP---------PARAAELTDEDFM--RRQILEMSAEEDNLEEDDTATSGRG----LAK 871
Query: 498 CDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAPT--EKLGGREGLASDAG 555
T+ + GP PR P+ +PAA P + A T E+L G A
Sbjct: 872 HGTQ-----------KGGPRPRPEPSQ-EPAALPKRRLPHNATTGYEELLPEGGSAEATD 919
Query: 556 GATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTG-TLSRD---------ASREEET 605
G+ R+ +TG G LG QG +L R+ S E+ +
Sbjct: 920 GSGTLQGGLRRFKTIELNSTGSY-GHELDLG---QGPDPSLDREPELEMESLTGSPEDRS 975
Query: 606 RG-HSEGLFSSMESAATSTTDTS 627
RG HS L +S S + T+ TS
Sbjct: 976 RGEHSSTLPASTPSYTSGTSPTS 998
Score = 33.1 bits (74), Expect = 1.1
Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 521 PPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAG 580
PP PG P PG P + + +L +E L G S +Q PG
Sbjct: 58 PPVPG-PGPGPGPGPGPGSTSRRLDPKEPL----GNQRAASPTPKQASATTPGHES--PR 110
Query: 581 ESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPC 640
E++A G A Q R + T+ S + +T T+ S AP+PS+ C
Sbjct: 111 ETRAQGPAGQEADGPRRTLQVDSRTQRSGRSPSVSPDRGSTPTSPYSVPQIAPLPSSTLC 170
Score = 31.2 bits (69), Expect = 4.3
Identities = 38/159 (23%), Positives = 52/159 (32%), Gaps = 21/159 (13%)
Query: 516 PTPRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTT 575
P + P TP A P G PR G AS AG S S + H TT
Sbjct: 1373 PFSQGPGTPATTAVAPCPAGLPR-------GYMTPASPAGSERSPSPSSTAHSYGHSPTT 1425
Query: 576 GLLAGESKALGGATQGTGTLSRDASREEETRGHSEG----------LFSS----MESAAT 621
+++ L A G R A + + EG F+S + ++
Sbjct: 1426 ANYGSQTEDLPQAPSGLAAAGRAAREKPLSASDGEGGTPQPSRAYSYFASSSPPLSPSSP 1485
Query: 622 STTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRP 660
S + T K +T S + P P R P P
Sbjct: 1486 SESPTFSPGKMGPRATAEFSTQTPSPAPASDMPRSPGAP 1524
Score = 30.0 bits (66), Expect = 9.6
Identities = 39/148 (26%), Positives = 55/148 (37%), Gaps = 12/148 (8%)
Query: 510 SWLRRGPTPRAPPTPGQ-PAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQEL 568
S+ P +P +P + P PG G PRA E A + AP+ +
Sbjct: 1471 SYFASSSPPLSPSSPSESPTFSPGKMG-PRATAEFSTQTPSPAPASDMPRSPGAPTPSPM 1529
Query: 569 WAH-------PGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAAT 621
A P T L+ ES A TL+ DAS + H+ S + S
Sbjct: 1530 VAQGTQTPHRPSTPRLVWQESSQ--EAPFMVITLASDASSQTRMV-HASASTSPLCSPTE 1586
Query: 622 STTDTSGKNKAPVPSTWPCSQKEPGPPG 649
+ T G ++ PS + PGPPG
Sbjct: 1587 TQPTTHGYSQTTPPSVSQLPPEPPGPPG 1614
Score = 30.0 bits (66), Expect = 9.6
Identities = 33/97 (34%), Positives = 41/97 (42%), Gaps = 21/97 (21%)
Query: 515 GPTPRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHP-G 573
GP P PP Q GS+G +AP + GR A A G P+ + A P G
Sbjct: 3830 GPQPAGPPRAEQ---TNGSKGTAKAPQQ---GRAPQAQPAPG----PGPAGVKAGARPGG 3879
Query: 574 TTGLLAGE---------SKAL-GGATQGTGTLSRDAS 600
T G AG+ SK L GGA + G L+ S
Sbjct: 3880 TPGAPAGQPGADGESVFSKILPGGAAEQAGKLTEAVS 3916
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 42.4 bits (98), Expect = 0.002
Identities = 47/186 (25%), Positives = 63/186 (33%), Gaps = 23/186 (12%)
Query: 513 RRG-PTPRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAG------GATVCSAPSR 565
R+G P P PP P P PG +G P P + G +G + G G P
Sbjct: 1366 RKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGL 1425
Query: 566 QELWAHPGTTGLLA--GESKALGGATQGT-GTLSRDASREEE-------------TRGHS 609
L PG G + G+ G + G G + S E+ RG
Sbjct: 1426 PGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFP 1485
Query: 610 EGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGGDTLDA 669
L + E +G P + P ++ GPPG G PG GD
Sbjct: 1486 GPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVV 1545
Query: 670 EPMLAG 675
P +AG
Sbjct: 1546 GPAVAG 1551
Score = 36.6 bits (83), Expect = 0.10
Identities = 56/208 (26%), Positives = 66/208 (31%), Gaps = 48/208 (23%)
Query: 516 PTPRAPPTPGQPAAPPGSQGAPRAPTEKLGGR-EGLASDAGGATVCSAPSRQELWAHPGT 574
P PR P P P G P AP + +GG GL G P + PG
Sbjct: 1331 PGPRGDPGERGPRGPKGE---PGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGP 1387
Query: 575 TGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPV 634
G A+ G G E G EG AP
Sbjct: 1388 RGPPGLPGTAMKGDKGDRG--------ERGPPGPGEG------------------GIAPG 1421
Query: 635 PSTWPCSQKEPGPPGVLGCFRGPWRPGHGGDTLDAEPMLAGCVARVAALKISSNEQ---- 690
P PGP G +G P + G GD+ D P L G S EQ
Sbjct: 1422 EPGLPGLPGSPGPQGPVG---PPGKKGEKGDSEDGAPGLPGQPG-------SPGEQGPRG 1471
Query: 691 PPAAWPPRQDMG----SGLFGQRWARGP 714
PP A P+ D G G G++ RGP
Sbjct: 1472 PPGAIGPKGDRGFPGPLGEAGEKGERGP 1499
Score = 33.5 bits (75), Expect = 0.87
Identities = 43/156 (27%), Positives = 50/156 (32%), Gaps = 40/156 (25%)
Query: 518 PRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGL 577
P +P PG P P G G AP + + G G + G A G G
Sbjct: 2277 PGSPGLPG-PVGPKGEPGPTGAPGQAVVGLPGAKGEKG--------------APGGLAGD 2321
Query: 578 LAGESKALGG-ATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPS 636
L GE A G G +A R E E G+ AP P
Sbjct: 2322 LVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGE----------------DGQKGAPGPK 2365
Query: 637 TW--------PCSQKEPGPPGVLGCFRGPWRPGHGG 664
+ P S PGPPGV G P PG G
Sbjct: 2366 GFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPG 2401
Score = 32.7 bits (73), Expect = 1.5
Identities = 43/158 (27%), Positives = 54/158 (34%), Gaps = 29/158 (18%)
Query: 518 PRAPPTPGQPAAPPGSQGAPRAPTEK----------------LGGREGLASDAGGATVCS 561
P A PG P +P G G P EK + G GL + G
Sbjct: 2589 PGAAGIPGDPGSP-GKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAG 2647
Query: 562 APSRQELWAHPGTTGL--LAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESA 619
P R L H G G + G+S GA G + R + + +G +
Sbjct: 2648 PPGRPGLAGHKGEMGEPGVPGQS----GAPGKEGLIGPKGDRGFDGQPGPKG-----DQG 2698
Query: 620 ATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGP 657
T G P PS S PGPPG +G RGP
Sbjct: 2699 EKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGP-RGP 2735
Score = 30.8 bits (68), Expect = 5.6
Identities = 41/155 (26%), Positives = 50/155 (32%), Gaps = 27/155 (17%)
Query: 518 PRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGL 577
P+ PP P PPG QG P P G +G + G P + L PG+
Sbjct: 1885 PQGPPGLPGPVGPPG-QGFPGVPGGT--GPKGDRGETGSKGEQGLPGERGLRGEPGSVPN 1941
Query: 578 LAGESKALGGATQGTGTLSRDASRE-EETRGHSEGLFSSMESAATSTTDTSGKNKAPVPS 636
+ + G + A RE ET S G F + SG
Sbjct: 1942 VDRLLETAG--------IKASALREIVETWDESSGSFLPVPERRRGPKGDSG-------- 1985
Query: 637 TWPCSQKEPGPPGVLGCFRGPWRPGHGGDTLDAEP 671
E GPPG G P G GD D P
Sbjct: 1986 -------EQGPPGKEGPIGFPGERGLKGDRGDPGP 2013
Score = 30.0 bits (66), Expect = 9.6
Identities = 53/213 (24%), Positives = 66/213 (30%), Gaps = 27/213 (12%)
Query: 519 RAPPTPGQPAAPPGSQGAPRAPTEKLG----GREGLASDAGGATVCSAPSRQELWAHPGT 574
R PP P A PG G P P G GR G + G R PGT
Sbjct: 2024 RGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGT 2083
Query: 575 TGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPV 634
G + G G S E+ G + S D K V
Sbjct: 2084 PGPPGPPGPKVSVDEPGPG-----LSGEQGPPG-----LKGAKGEPGSNGDQGPKGDRGV 2133
Query: 635 PSTWPCSQKEPGPPGVLGCFRGPWRPGHGGDT-LDAEPMLAGCVARVAALKISSNEQPPA 693
P + EPGP G G P PG G + +P L G + + PP
Sbjct: 2134 PGI-KGDRGEPGPRGQDG---NPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPG 2189
Query: 694 AWPPRQDMGSGLFGQRWARGPDMLEQKQSSSSP 726
A GL G +GP L+ + + P
Sbjct: 2190 A--------PGLAGPAGPQGPSGLKGEPGETGP 2214
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 40.8 bits (94), Expect = 0.005
Identities = 62/210 (29%), Positives = 78/210 (37%), Gaps = 32/210 (15%)
Query: 516 PTPRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTT 575
P R P PA P G+ GAP G +G DAG AP Q PG
Sbjct: 682 PGERGVQGPPGPAGPRGANGAP--------GNDGAKGDAGAP---GAPGSQ---GAPGLQ 727
Query: 576 GLLAGESKALG-----GATQGTGTLSRDASREEE-TRGHSEGLFSSMESAATSTTDTSGK 629
G+ GE A G G G D S ++ RG + + + A SG
Sbjct: 728 GM-PGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGP 786
Query: 630 NKAPVPSTW---PCSQKEPGPPGVLGCFRGPWRPGHGGDT-LDAEPMLAGCVARVAALKI 685
+ P+ P + EPGPPG G F GP PG G EP AG
Sbjct: 787 SGPAGPTGARGAPGDRGEPGPPGPAG-FAGP--PGADGQPGAKGEPGDAGAKGDAGPPGP 843
Query: 686 SSNEQPPAAWPPRQDMGS-GLFGQRWARGP 714
+ PP P ++G+ G G R + GP
Sbjct: 844 AGPAGPPG---PIGNVGAPGAKGARGSAGP 870
Score = 37.7 bits (86), Expect = 0.046
Identities = 56/232 (24%), Positives = 74/232 (31%), Gaps = 47/232 (20%)
Query: 518 PRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAP------SRQELWAH 571
P P PG P P G+ G P AP K G G + G V P ++
Sbjct: 417 PSGPQGPGGPPGPKGNSGEPGAPGSK--GDTGAKGEPGPVGVQGPPGPAGEEGKRGARGE 474
Query: 572 PGTTGLLAGESKALGGATQG-------------------TGTLSRDASREEETRGHSEGL 612
PG TGL + G ++G G S E R GL
Sbjct: 475 PGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGL 534
Query: 613 FSSME-SAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLG-----CFRGP----WRPGH 662
+ + + + GK P P+ PGPPG G F GP PG
Sbjct: 535 PGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGK 594
Query: 663 GGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGP 714
G+ P G V + + PP +G G+R +GP
Sbjct: 595 AGER--GVPGPPGAVGPAGKDGEAGAQGPPGP--------AGPAGERGEQGP 636
Score = 37.0 bits (84), Expect = 0.079
Identities = 42/186 (22%), Positives = 60/186 (32%), Gaps = 7/186 (3%)
Query: 488 WKGKECLLKLCDTELAITMGIV-SWLRRGPTPRAPPTPGQPAAPPGSQGAPRAPTEKLGG 546
WK + C + +CD + ++ + P P P P GS+ T + G
Sbjct: 53 WKPEPCRICVCDNGKVLCDDVICDETKNCPGAEVPEGECCPVCPDGSESPTDQETTGVEG 112
Query: 547 REGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETR 606
+G G P R + PG G G +E++
Sbjct: 113 PKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKST 172
Query: 607 GHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCF--RG-PWRPGHG 663
G G+ + G AP P + EPG PG G RG P PG
Sbjct: 173 G---GISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKN 229
Query: 664 GDTLDA 669
GD +A
Sbjct: 230 GDDGEA 235
Score = 35.0 bits (79), Expect = 0.30
Identities = 50/201 (24%), Positives = 59/201 (29%), Gaps = 15/201 (7%)
Query: 521 PPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLA- 579
PP P A PPG+ G P G +G DAG P PG G +
Sbjct: 807 PPGPAGFAGPPGADGQP--------GAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGA 858
Query: 580 -GESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTW 638
G A G A T A+ G S G P+
Sbjct: 859 PGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGR 918
Query: 639 PCSQKEPGPPGVLGCFRGPWRPGHGGDTLDAEPMLAGCVARVAALKISSNEQ-----PPA 693
P PGPPG G P G G P V L E+ P
Sbjct: 919 PGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGP 978
Query: 694 AWPPRQDMGSGLFGQRWARGP 714
+ P + SG G+R GP
Sbjct: 979 SGEPGKQGPSGASGERGPPGP 999
Score = 34.3 bits (77), Expect = 0.51
Identities = 57/237 (24%), Positives = 73/237 (30%), Gaps = 16/237 (6%)
Query: 516 PTPRAPPTPGQPAAPPGSQGAPRAPTEK-LGGREGLASDAGGATVCSAPSRQELWAHPGT 574
P R PP P PG+ G P + G +G DAG A P PG
Sbjct: 241 PGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQ 300
Query: 575 TGL--LAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKA 632
G L GE + GA G D + G +
Sbjct: 301 MGPRGLPGE-RGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQG 359
Query: 633 PVPSTWPCSQK-EPGPPGVLGCFRGPWRPGHGGDT----LDAEPMLAGCVARVAALKISS 687
P S P + EPGPPG G PG G + P +AG A S
Sbjct: 360 PRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSG 419
Query: 688 NEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQKQSSSSPSMTTIHGLPYSASTQDQR 744
+ P PP SG G ++G + P + G P A + +R
Sbjct: 420 PQGP--GGPPGPKGNSGEPGAPGSKG-----DTGAKGEPGPVGVQGPPGPAGEEGKR 469
Score = 34.3 bits (77), Expect = 0.51
Identities = 56/200 (28%), Positives = 66/200 (33%), Gaps = 26/200 (13%)
Query: 519 RAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLL 578
+ PP P PA G QG +P G +GL AG P Q + PG G
Sbjct: 619 QGPPGPAGPAGERGEQGPAGSP-----GFQGLPGPAGPPGEAGKPGEQGV---PGDLG-A 669
Query: 579 AGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTW 638
G S A G R E +G + A G AP
Sbjct: 670 PGPSGARG---------ERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGA--- 717
Query: 639 PCSQKEPGPPGVLGCFRGPWRPGHGGDTLDAEPMLA-GCVARVAALKISSNEQPPAAWPP 697
P SQ PG G+ G PG GD DA P A G + ++ PP
Sbjct: 718 PGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGA 777
Query: 698 RQDMG----SGLFGQRWARG 713
D G SG G ARG
Sbjct: 778 PGDKGESGPSGPAGPTGARG 797
Score = 32.3 bits (72), Expect = 1.9
Identities = 44/157 (28%), Positives = 52/157 (33%), Gaps = 23/157 (14%)
Query: 521 PPTPGQPAAPPGSQGA--------PRAPTEKLG-----GREGLASDAGGATVCSAPSRQE 567
PP P PA PPG GA P+ P G G G AG A P
Sbjct: 333 PPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGAD- 391
Query: 568 LWAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTS 627
PG G A + + GA G +R S + G +S E A + +
Sbjct: 392 --GQPGAKG--ANGAPGIAGAPGFPG--ARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDT 445
Query: 628 GKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGG 664
G P P Q PGP G G PG G
Sbjct: 446 GAKGEPGPVG---VQGPPGPAGEEGKRGARGEPGPTG 479
Score = 31.6 bits (70), Expect = 3.3
Identities = 55/207 (26%), Positives = 66/207 (31%), Gaps = 32/207 (15%)
Query: 518 PRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGL 577
P PP P PG+ G AP G G AG V P ++ PG G
Sbjct: 924 PPGPPGPAGEKGSPGADGPAGAP-----GTPGPQGIAGQRGVVGLPGQRGERGFPGLPGP 978
Query: 578 LA-----GESKALG-----GATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTS 627
G S A G G G E +EG S +
Sbjct: 979 SGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEG--SPGRDGSPGAKGDR 1036
Query: 628 GKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGGDTLDAEPMLAGCVARVAALKISS 687
G+ P P + PGP G G + G G+T A P AG V V A
Sbjct: 1037 GETGPAGPPGAPGAPGAPGPVGPAG------KSGDRGETGPAGP--AGPVGPVGA----- 1083
Query: 688 NEQPPAAWPPRQDMG-SGLFGQRWARG 713
P PR D G +G G R +G
Sbjct: 1084 -RGPAGPQGPRGDKGETGEQGDRGIKG 1109
Score = 31.6 bits (70), Expect = 3.3
Identities = 43/160 (26%), Positives = 50/160 (31%), Gaps = 13/160 (8%)
Query: 513 RRGPTPRAPPTPGQPAAPPGSQGAPRAP-TEKLGGREGLASDAGGATVCSAPSRQELWAH 571
R P P PP P G +GAP A + G G D G P
Sbjct: 994 RGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGA 1053
Query: 572 PGTTGLLA-----GESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDT 626
PG G GE+ G A +R + + RG +
Sbjct: 1054 PGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGF 1113
Query: 627 SGKNKAPVPSTWPCSQKEPGPPGVLGCF--RGPWRPGHGG 664
SG P P P S E GP G G RGP PG G
Sbjct: 1114 SGLQGPPGP---PGSPGEQGPSGASGPAGPRGP--PGSAG 1148
Score = 31.2 bits (69), Expect = 4.3
Identities = 49/203 (24%), Positives = 64/203 (31%), Gaps = 23/203 (11%)
Query: 521 PPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAG 580
PP P PA PPG G AP G +G AG P PG +G AG
Sbjct: 840 PPGPAGPAGPPGPIGNVGAP-----GAKGARGSAGPPGATGFPGAAGRVGPPGPSG-NAG 893
Query: 581 ESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPC 640
G A + G + RG + E +G+ +P
Sbjct: 894 PPGPPGPAGKEGG---------KGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAG 944
Query: 641 SQKEPGPPGVLGCFRGPWRPGHGGDT-LDAEPMLAGCVARVAALKISSNEQPPA------ 693
+ PGP G+ G PG G+ P +G + S PP
Sbjct: 945 APGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPG 1004
Query: 694 -AWPPRQDMGSGLFGQRWARGPD 715
A PP + G G + G D
Sbjct: 1005 LAGPPGESGREGAPGAEGSPGRD 1027
>gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens]
Length = 1388
Score = 40.8 bits (94), Expect = 0.005
Identities = 89/359 (24%), Positives = 134/359 (37%), Gaps = 43/359 (11%)
Query: 257 ESSVPSLELNEGPESPTQAAQGLESKVPRGPLQG---SVEQLASPAQNEA---SDFTRFW 310
E+ V + P SP + + VP G L+ S+ Q +SP Q +D
Sbjct: 271 EAKVEPINTPPTPSSPFEDMELSGEPVPEGTLETTNMSIIQHSSPKQGSGEILNDTLEGV 330
Query: 311 DSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRSGSKASSIDTG 370
SV+ + G +L + AGLAE+P+ + ++ASS+ TG
Sbjct: 331 HSVDGDPITDSGSGAGAFLDI---AEEKNLAATAAGLAEVPISTAGE----AEASSVPTG 383
Query: 371 TPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPA---ATFPRD-SYSGDALYELF 426
P ++S S E + +PG + +++ A + A A+ P + SG A EL
Sbjct: 384 GP------TLSMSTENPEEGVTPGPDNEERLAATAAGEAEALASMPGEVEASGVAPGELD 437
Query: 427 HDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPG-----PDLLSQ 481
S LG +SL+ A T +S+ +F E + P G + +
Sbjct: 438 LSMSAQSLGEEATVGPSSEDSLTTAAAATEVSLSTFE-DEEASGVPTDGLAPLTATMAPE 496
Query: 482 GFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAPT 541
+ S +E L E IT G P P PP P AP + A
Sbjct: 497 RAVTSGPGDEEDLAAATTEEPLITAG--GEESGSPPPDGPPLPLPTVAP--ERWITPAQR 552
Query: 542 EKLG-----GREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALG-GATQGTGT 594
E +G G +G DAG P E G T E LG G+ G+G+
Sbjct: 553 EHVGMKGQAGPKGEKGDAGE----ELPGPPEPSGPVGPTAGAEAEGSGLGWGSDVGSGS 607
Score = 36.2 bits (82), Expect = 0.13
Identities = 133/580 (22%), Positives = 189/580 (32%), Gaps = 125/580 (21%)
Query: 188 GDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVASLQSFDSL 247
GDP G + AFL D+ + + LA + GL ++
Sbjct: 335 GDPITDSGSGAGAFL-------------DIAEEKNLAATAAGLAEVPISTAGEAEASSVP 381
Query: 248 TGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLAS-PAQNEASDF 306
TG G + + P + GP++ + A G E LAS P + EAS
Sbjct: 382 TG-GPTLSMSTENPEEGVTPGPDNEERLA---------ATAAGEAEALASMPGEVEASGV 431
Query: 307 TRFWDSVNRSVRQQ-QRALLGPWLSGPQGT-------------DRDQSRLDTAGLAELP- 351
++ S + + A +GP T D + S + T GLA L
Sbjct: 432 APGELDLSMSAQSLGEEATVGPSSEDSLTTAAAATEVSLSTFEDEEASGVPTDGLAPLTA 491
Query: 352 -LCPCRDPRSGSKASSIDTGTPKSEQP-------ESVSTSDEGY---YDSFSPGLEEDKK 400
+ P R SG D +E+P ES S +G + +P
Sbjct: 492 TMAPERAVTSGP-GDEEDLAAATTEEPLITAGGEESGSPPPDGPPLPLPTVAPERWITPA 550
Query: 401 EAESPGTPAATFPRDSYSGDALYELFHDPS-EGPLGPSPDDDLCVSESLSGPALGTPLSI 459
+ E G P+ GDA EL P GP+GP+ G LG +
Sbjct: 551 QREHVGMKGQAGPKGE-KGDAGEELPGPPEPSGPVGPT------AGAEAEGSGLGWGSDV 603
Query: 460 CSFR---VGAEENLAPAPGPDLLSQGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGP 516
S VG+E+ L PGP G + T++ + GP
Sbjct: 604 GSGSGDLVGSEQLLRGPPGPP---------GPPGLPGIPGKPGTDVFM----------GP 644
Query: 517 T-------PRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELW 569
P P P P PG GA P K G +G G P + L
Sbjct: 645 PGSPGEDGPAGEPGPPGPEGQPGVDGATGLPGMK--GEKGARGPNGSVGEKGDPGNRGLP 702
Query: 570 AHPGTTGLLAGESKALG-------------GATQGTGTLSRDASREEETRGHSEGLFSSM 616
PG G AG +G G T G G + E G ++ L
Sbjct: 703 GPPGKKG-QAGPPGVMGPPGPPGPPGPPGPGCTMGLG------FEDTEGSGSTQLLNEPK 755
Query: 617 ESAATSTTDTSGK--NKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGGDTLDAEPMLA 674
S T+ G+ ++ P GPPG RGP PGH +L+
Sbjct: 756 LSRPTAAIGLKGEKGDRGPKGERGMDGASIVGPPGP----RGP--PGH-------IKVLS 802
Query: 675 GCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGP 714
+ + ++ ++ P PP D GL G RGP
Sbjct: 803 NSLINITHGFMNFSDIPELVGPPGPDGLPGLPGFPGPRGP 842
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 40.8 bits (94), Expect = 0.005
Identities = 55/224 (24%), Positives = 73/224 (32%), Gaps = 43/224 (19%)
Query: 515 GPTPRAPPTPGQPAA--------PPGSQGAPRAPTEK----LGGREGLASDAGGATVCSA 562
GP P P PG+P PPG QG P K G++G A + G A +
Sbjct: 1332 GP-PGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGG 1390
Query: 563 PSRQELWA------------HPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSE 610
P + HPG G S L G G + + R
Sbjct: 1391 PGKSGSMGPVGPPGPAGERGHPGAPG--PSGSPGLPGVPGSMGDMVNYDEIKRFIRQEII 1448
Query: 611 GLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGGDTLDAE 670
+F + TS + P + PGPPG G P RPG G
Sbjct: 1449 KMFDERMAYYTS--------RMQFPMEMAAAPGRPGPPGKDG---APGRPGAPG-----S 1492
Query: 671 PMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGP 714
P L G + R + P + D+G G+ G+ GP
Sbjct: 1493 PGLPGQIGREGRQGLPGVRGLPGTKGEKGDIGIGIAGENGLPGP 1536
Score = 38.5 bits (88), Expect = 0.027
Identities = 53/169 (31%), Positives = 62/169 (36%), Gaps = 46/169 (27%)
Query: 516 PTPRAPP-TPGQPAAP--PGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELW--- 569
P P+ PP PG P P PG QG P L G+ GL ++ G S P Q L
Sbjct: 903 PGPQGPPGIPGPPGPPGVPGLQGVP--GNNGLPGQPGLTAELG-----SLPIEQHLLKSI 955
Query: 570 ---------AHPGTTGLLAGESKALGGATQGTGT-------LSRDASREEETRG-HSEGL 612
AHPG L+ K G G LS + R EE RG +SEG
Sbjct: 956 CGDCVQGQRAHPGY--LVEKGEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGDNSEG- 1012
Query: 613 FSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPG 661
G P P P + E GPPG+ G P PG
Sbjct: 1013 ----------DPGCVGSPGLPGPPGLPGQRGEEGPPGMRG---SPGPPG 1048
Score = 33.9 bits (76), Expect = 0.66
Identities = 51/187 (27%), Positives = 62/187 (33%), Gaps = 32/187 (17%)
Query: 515 GPTPRAPPTP-GQPAAP--PGSQG--APRAPTEKLGGREGLASDA-GGATVCSAPSRQEL 568
GP R P G+P AP PG QG PR P G + S GAT P +
Sbjct: 783 GPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASV 842
Query: 569 WAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSG 628
PG G G T GT R E+ E + S D
Sbjct: 843 SGPPGRDGQQ--------GQTGLRGTPGEKGPRGEKGEPG--------ECSCPSQGDLIF 886
Query: 629 KNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPG-------HGGDTLDAEPMLAGCVARVA 681
P W S +PGP G G P PG G + L +P G A +
Sbjct: 887 SGMPGAPGLWMGSSWQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGLPGQP---GLTAELG 943
Query: 682 ALKISSN 688
+L I +
Sbjct: 944 SLPIEQH 950
Score = 33.9 bits (76), Expect = 0.66
Identities = 42/151 (27%), Positives = 47/151 (31%), Gaps = 13/151 (8%)
Query: 516 PTPRAPPTPGQPAAPPGSQGAPRAP-TEKLGGREGLASDAGGATVCSAPSRQELWAHPGT 574
P R P P P PPG GA +P L G GL G P + +PG
Sbjct: 1038 PGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPGQP---GYPGA 1094
Query: 575 TGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAA----TSTTDTSGKN 630
TG L G G + E SEGL A SG+
Sbjct: 1095 TG-----PPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEK 1149
Query: 631 KAPVPSTWPCSQKEPGPPGVLGCFRGPWRPG 661
P PGPPG G P PG
Sbjct: 1150 GDQGFQGQPGFPGPPGPPGFPGKVGSPGPPG 1180
Score = 31.6 bits (70), Expect = 3.3
Identities = 36/154 (23%), Positives = 48/154 (31%), Gaps = 4/154 (2%)
Query: 518 PRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGL 577
P+ P P PPG G P G +G G + P + HPG G
Sbjct: 1283 PQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAGLPGQPGPPGHPGPPG- 1341
Query: 578 LAGESKALG--GATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVP 635
G A G G G + + +G A + PV
Sbjct: 1342 EPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVG 1401
Query: 636 STWPCSQK-EPGPPGVLGCFRGPWRPGHGGDTLD 668
P ++ PG PG G P PG GD ++
Sbjct: 1402 PPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVN 1435
Score = 31.2 bits (69), Expect = 4.3
Identities = 67/273 (24%), Positives = 83/273 (30%), Gaps = 51/273 (18%)
Query: 518 PRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGL 577
P P P P P G +GA P E L G V + P PG G
Sbjct: 609 PAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQD--GDVRVVALPGPSGEKGEPGPPGF 666
Query: 578 -------LAGESKALG--------GATQGTGTLSRDASREEE-------TRGHSEGLFSS 615
AGE G G GT R E +G ++
Sbjct: 667 GLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTA 726
Query: 616 MESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGGDTLDAEPMLAG 675
S + TD +G+ P P + E GP GV RPG G +P L G
Sbjct: 727 CPSLQGTVTDMAGRPGQPGP------KGEQGPEGV-------GRPGKPG-----QPGLPG 768
Query: 676 CVARVAALKISSNEQPP--AAWPPRQDMGS-------GLFGQRWARGPDMLEQKQSSSSP 726
+ PP P+ + G+ GL G R GP + Q S
Sbjct: 769 VQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGV 828
Query: 727 SMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEP 759
T P AS RD Q + LR P
Sbjct: 829 KGATGPVGPPGASVSGPPGRDGQQGQTGLRGTP 861
>gi|169217315 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 40.4 bits (93), Expect = 0.007
Identities = 53/210 (25%), Positives = 75/210 (35%), Gaps = 35/210 (16%)
Query: 455 TPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLKLCDTELAITMGIVSWLRR 514
TP ++CS R GA +AP PG + ++ + C LC + MG+
Sbjct: 757 TPGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPC--ALCGKGSQVGMGVA----- 809
Query: 515 GPTPRAPPTPGQPAAPPGSQGAPRAPTE----KLGGR--EGLASDAGGATVCSAPSRQEL 568
PTPG G APT ++G R G+A AG +P R+ +
Sbjct: 810 -------PTPGALRRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAV 862
Query: 569 WAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSG 628
PGT G+T G L D S + + G S S A
Sbjct: 863 APTPGTLHCDGSRKCTATGST--PGALPGDRSGVSKATAPAPGALCSERSRAR------- 913
Query: 629 KNKAPVP------STWPCSQKEPGPPGVLG 652
++ AP P +W P P +LG
Sbjct: 914 RSIAPTPCLLCGDRSWVGMGIAPTPGALLG 943
Score = 32.3 bits (72), Expect = 1.9
Identities = 81/324 (25%), Positives = 113/324 (34%), Gaps = 40/324 (12%)
Query: 338 DQSRLDTAGLAELPLCPCRDPRSGSKASSIDTGTPKSEQ--------PESVSTSDEGYYD 389
D+SR TA + P C D S+A + GT SE+ P + +G
Sbjct: 746 DRSRELTA-IDPTPGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPCALCGKGSQV 804
Query: 390 SF----SPG-LEEDKKEAESP--GTPAATFPRDSYSGDALY----ELFHD--PSEGPLGP 436
+PG L D+ +A TP+A F S G + L D P + P
Sbjct: 805 GMGVAPTPGALRRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAVAP 864
Query: 437 SPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLK 496
+P C TP ++ R G + APAPG + + S CL
Sbjct: 865 TPGTLHCDGSRKCTATGSTPGALPGDRSGVSKATAPAPGALCSERSRARRSIAPTPCL-- 922
Query: 497 LCDTELAITMGIV---SWLRRGPTPRAPPTPGQPAAPPGSQGAPR---APTEKLGGREG- 549
LC + MGI L G + + P A G + R APT + +G
Sbjct: 923 LCGDRSWVGMGIAPTPGALLGGKSRKCRAIAITPGALRGGRSQKRRVVAPTPEALHGDGS 982
Query: 550 -----LASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGT-GTLSRDASREE 603
+A G S+P+ + PG L G+ A T GTL DAS
Sbjct: 983 WTYMAIAPTPGALHGDSSPAHTSIIPSPGA---LHGDGPPAHMAFPSTPGTLHGDASHAH 1039
Query: 604 ETRGHSEGLFSSMESAATSTTDTS 627
+ G S A + T S
Sbjct: 1040 MAIAPTPGTMRGDSSTARTATAPS 1063
>gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 40.4 bits (93), Expect = 0.007
Identities = 53/210 (25%), Positives = 75/210 (35%), Gaps = 35/210 (16%)
Query: 455 TPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLKLCDTELAITMGIVSWLRR 514
TP ++CS R GA +AP PG + ++ + C LC + MG+
Sbjct: 757 TPGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPC--ALCGKGSQVGMGVA----- 809
Query: 515 GPTPRAPPTPGQPAAPPGSQGAPRAPTE----KLGGR--EGLASDAGGATVCSAPSRQEL 568
PTPG G APT ++G R G+A AG +P R+ +
Sbjct: 810 -------PTPGALRRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAV 862
Query: 569 WAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSG 628
PGT G+T G L D S + + G S S A
Sbjct: 863 APTPGTLHCDGSRKCTATGST--PGALPGDRSGVSKATAPAPGALCSERSRAR------- 913
Query: 629 KNKAPVP------STWPCSQKEPGPPGVLG 652
++ AP P +W P P +LG
Sbjct: 914 RSIAPTPCLLCGDRSWVGMGIAPTPGALLG 943
Score = 32.3 bits (72), Expect = 1.9
Identities = 81/324 (25%), Positives = 113/324 (34%), Gaps = 40/324 (12%)
Query: 338 DQSRLDTAGLAELPLCPCRDPRSGSKASSIDTGTPKSEQ--------PESVSTSDEGYYD 389
D+SR TA + P C D S+A + GT SE+ P + +G
Sbjct: 746 DRSRELTA-IDPTPGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPCALCGKGSQV 804
Query: 390 SF----SPG-LEEDKKEAESP--GTPAATFPRDSYSGDALY----ELFHD--PSEGPLGP 436
+PG L D+ +A TP+A F S G + L D P + P
Sbjct: 805 GMGVAPTPGALRRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAVAP 864
Query: 437 SPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLK 496
+P C TP ++ R G + APAPG + + S CL
Sbjct: 865 TPGTLHCDGSRKCTATGSTPGALPGDRSGVSKATAPAPGALCSERSRARRSIAPTPCL-- 922
Query: 497 LCDTELAITMGIV---SWLRRGPTPRAPPTPGQPAAPPGSQGAPR---APTEKLGGREG- 549
LC + MGI L G + + P A G + R APT + +G
Sbjct: 923 LCGDRSWVGMGIAPTPGALLGGKSRKCRAIAITPGALRGGRSQKRRVVAPTPEALHGDGS 982
Query: 550 -----LASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGT-GTLSRDASREE 603
+A G S+P+ + PG L G+ A T GTL DAS
Sbjct: 983 WTYMAIAPTPGALHGDSSPAHTSIIPSPGA---LHGDGPPAHMAFPSTPGTLHGDASHAH 1039
Query: 604 ETRGHSEGLFSSMESAATSTTDTS 627
+ G S A + T S
Sbjct: 1040 MAIAPTPGTMRGDSSTARTATAPS 1063
>gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2028
Score = 40.4 bits (93), Expect = 0.007
Identities = 53/210 (25%), Positives = 75/210 (35%), Gaps = 35/210 (16%)
Query: 455 TPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLKLCDTELAITMGIVSWLRR 514
TP ++CS R GA +AP PG + ++ + C LC + MG+
Sbjct: 725 TPGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPC--ALCGKGSQVGMGVA----- 777
Query: 515 GPTPRAPPTPGQPAAPPGSQGAPRAPTE----KLGGR--EGLASDAGGATVCSAPSRQEL 568
PTPG G APT ++G R G+A AG +P R+ +
Sbjct: 778 -------PTPGALRRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAV 830
Query: 569 WAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSG 628
PGT G+T G L D S + + G S S A
Sbjct: 831 APTPGTLHCDGSRKCTATGST--PGALPGDRSGVSKATAPAPGALCSERSRAR------- 881
Query: 629 KNKAPVP------STWPCSQKEPGPPGVLG 652
++ AP P +W P P +LG
Sbjct: 882 RSIAPTPCLLCGDRSWVGMGIAPTPGALLG 911
Score = 32.3 bits (72), Expect = 1.9
Identities = 81/324 (25%), Positives = 113/324 (34%), Gaps = 40/324 (12%)
Query: 338 DQSRLDTAGLAELPLCPCRDPRSGSKASSIDTGTPKSEQ--------PESVSTSDEGYYD 389
D+SR TA + P C D S+A + GT SE+ P + +G
Sbjct: 714 DRSRELTA-IDPTPGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPCALCGKGSQV 772
Query: 390 SF----SPG-LEEDKKEAESP--GTPAATFPRDSYSGDALY----ELFHD--PSEGPLGP 436
+PG L D+ +A TP+A F S G + L D P + P
Sbjct: 773 GMGVAPTPGALRRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAVAP 832
Query: 437 SPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLK 496
+P C TP ++ R G + APAPG + + S CL
Sbjct: 833 TPGTLHCDGSRKCTATGSTPGALPGDRSGVSKATAPAPGALCSERSRARRSIAPTPCL-- 890
Query: 497 LCDTELAITMGIV---SWLRRGPTPRAPPTPGQPAAPPGSQGAPR---APTEKLGGREG- 549
LC + MGI L G + + P A G + R APT + +G
Sbjct: 891 LCGDRSWVGMGIAPTPGALLGGKSRKCRAIAITPGALRGGRSQKRRVVAPTPEALHGDGS 950
Query: 550 -----LASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGT-GTLSRDASREE 603
+A G S+P+ + PG L G+ A T GTL DAS
Sbjct: 951 WTYMAIAPTPGALHGDSSPAHTSIIPSPGA---LHGDGPPAHMAFPSTPGTLHGDASHAH 1007
Query: 604 ETRGHSEGLFSSMESAATSTTDTS 627
+ G S A + T S
Sbjct: 1008 MAIAPTPGTMRGDSSTARTATAPS 1031
>gi|113430175 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1934
Score = 40.4 bits (93), Expect = 0.007
Identities = 53/210 (25%), Positives = 75/210 (35%), Gaps = 35/210 (16%)
Query: 455 TPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLKLCDTELAITMGIVSWLRR 514
TP ++CS R GA +AP PG + ++ + C LC + MG+
Sbjct: 631 TPGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPC--ALCGKGSQVGMGVA----- 683
Query: 515 GPTPRAPPTPGQPAAPPGSQGAPRAPTE----KLGGR--EGLASDAGGATVCSAPSRQEL 568
PTPG G APT ++G R G+A AG +P R+ +
Sbjct: 684 -------PTPGALRRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAV 736
Query: 569 WAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSG 628
PGT G+T G L D S + + G S S A
Sbjct: 737 APTPGTLHCDGSRKCTATGST--PGALPGDRSGVSKATAPAPGALCSERSRAR------- 787
Query: 629 KNKAPVP------STWPCSQKEPGPPGVLG 652
++ AP P +W P P +LG
Sbjct: 788 RSIAPTPCLLCGDRSWVGMGIAPTPGALLG 817
Score = 32.3 bits (72), Expect = 1.9
Identities = 81/324 (25%), Positives = 113/324 (34%), Gaps = 40/324 (12%)
Query: 338 DQSRLDTAGLAELPLCPCRDPRSGSKASSIDTGTPKSEQ--------PESVSTSDEGYYD 389
D+SR TA + P C D S+A + GT SE+ P + +G
Sbjct: 620 DRSRELTA-IDPTPGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPCALCGKGSQV 678
Query: 390 SF----SPG-LEEDKKEAESP--GTPAATFPRDSYSGDALY----ELFHD--PSEGPLGP 436
+PG L D+ +A TP+A F S G + L D P + P
Sbjct: 679 GMGVAPTPGALRRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAVAP 738
Query: 437 SPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLK 496
+P C TP ++ R G + APAPG + + S CL
Sbjct: 739 TPGTLHCDGSRKCTATGSTPGALPGDRSGVSKATAPAPGALCSERSRARRSIAPTPCL-- 796
Query: 497 LCDTELAITMGIV---SWLRRGPTPRAPPTPGQPAAPPGSQGAPR---APTEKLGGREG- 549
LC + MGI L G + + P A G + R APT + +G
Sbjct: 797 LCGDRSWVGMGIAPTPGALLGGKSRKCRAIAITPGALRGGRSQKRRVVAPTPEALHGDGS 856
Query: 550 -----LASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGT-GTLSRDASREE 603
+A G S+P+ + PG L G+ A T GTL DAS
Sbjct: 857 WTYMAIAPTPGALHGDSSPAHTSIIPSPGA---LHGDGPPAHMAFPSTPGTLHGDASHAH 913
Query: 604 ETRGHSEGLFSSMESAATSTTDTS 627
+ G S A + T S
Sbjct: 914 MAIAPTPGTMRGDSSTARTATAPS 937
>gi|38373682 pleckstrin homology domain containing family G member 5
isoform a [Homo sapiens]
Length = 1006
Score = 40.4 bits (93), Expect = 0.007
Identities = 74/298 (24%), Positives = 113/298 (37%), Gaps = 35/298 (11%)
Query: 372 PKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGDALYELFHDPSE 431
P S+QP +E + EE+++E E GT AA+ P + H S+
Sbjct: 695 PGSQQPLQSLEEEEDEQEEEEEE-EEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASD 753
Query: 432 GPLGPSPDDDLCVSESLSGPALGT-PLSICSFRVGAEENLAPA-PGPDLLSQGFLQSSWK 489
G + ++LS P + P S S + A P +LL G +
Sbjct: 754 GSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTSELLPLGPVD---- 809
Query: 490 GKECLLKLCDTELAITMGIVSWLRRGP----TPRAPPTPGQPAAPPGSQGAPRAPTEKLG 545
G+ C + L+ T + ++ GP PRAP +P P+ PP + R P + L
Sbjct: 810 GRSCSMDSAYGTLSPT-SLQDFVAPGPMAELVPRAPESPRVPSPPPSPRLRRRTPVQLLS 868
Query: 546 GREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKAL----------GGATQGTGTL 595
L A++ +L A GT G + S++L G TQG+
Sbjct: 869 CPPHLLKSKSEASLL------QLLAGAGTHGTPSAPSRSLSELCLAVPAPGIRTQGSPQE 922
Query: 596 SRDA--SREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPS-TWPCSQKEPGPPGV 650
+ + R + G GL + A + K +PS P Q EP PPGV
Sbjct: 923 AGPSWDCRGAPSPGSGPGLVGCL---AGEPAGSHRKRCGDLPSGASPRVQPEP-PPGV 976
>gi|111154084 pleckstrin homology domain containing family G member 5
isoform b [Homo sapiens]
Length = 1083
Score = 40.4 bits (93), Expect = 0.007
Identities = 74/298 (24%), Positives = 113/298 (37%), Gaps = 35/298 (11%)
Query: 372 PKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGDALYELFHDPSE 431
P S+QP +E + EE+++E E GT AA+ P + H S+
Sbjct: 772 PGSQQPLQSLEEEEDEQEEEEEE-EEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASD 830
Query: 432 GPLGPSPDDDLCVSESLSGPALGT-PLSICSFRVGAEENLAPA-PGPDLLSQGFLQSSWK 489
G + ++LS P + P S S + A P +LL G +
Sbjct: 831 GSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTSELLPLGPVD---- 886
Query: 490 GKECLLKLCDTELAITMGIVSWLRRGP----TPRAPPTPGQPAAPPGSQGAPRAPTEKLG 545
G+ C + L+ T + ++ GP PRAP +P P+ PP + R P + L
Sbjct: 887 GRSCSMDSAYGTLSPT-SLQDFVAPGPMAELVPRAPESPRVPSPPPSPRLRRRTPVQLLS 945
Query: 546 GREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKAL----------GGATQGTGTL 595
L A++ +L A GT G + S++L G TQG+
Sbjct: 946 CPPHLLKSKSEASLL------QLLAGAGTHGTPSAPSRSLSELCLAVPAPGIRTQGSPQE 999
Query: 596 SRDA--SREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPS-TWPCSQKEPGPPGV 650
+ + R + G GL + A + K +PS P Q EP PPGV
Sbjct: 1000 AGPSWDCRGAPSPGSGPGLVGCL---AGEPAGSHRKRCGDLPSGASPRVQPEP-PPGV 1053
>gi|111154088 pleckstrin homology domain containing family G member
5 isoform a [Homo sapiens]
Length = 1006
Score = 40.4 bits (93), Expect = 0.007
Identities = 74/298 (24%), Positives = 113/298 (37%), Gaps = 35/298 (11%)
Query: 372 PKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGDALYELFHDPSE 431
P S+QP +E + EE+++E E GT AA+ P + H S+
Sbjct: 695 PGSQQPLQSLEEEEDEQEEEEEE-EEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASD 753
Query: 432 GPLGPSPDDDLCVSESLSGPALGT-PLSICSFRVGAEENLAPA-PGPDLLSQGFLQSSWK 489
G + ++LS P + P S S + A P +LL G +
Sbjct: 754 GSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTSELLPLGPVD---- 809
Query: 490 GKECLLKLCDTELAITMGIVSWLRRGP----TPRAPPTPGQPAAPPGSQGAPRAPTEKLG 545
G+ C + L+ T + ++ GP PRAP +P P+ PP + R P + L
Sbjct: 810 GRSCSMDSAYGTLSPT-SLQDFVAPGPMAELVPRAPESPRVPSPPPSPRLRRRTPVQLLS 868
Query: 546 GREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKAL----------GGATQGTGTL 595
L A++ +L A GT G + S++L G TQG+
Sbjct: 869 CPPHLLKSKSEASLL------QLLAGAGTHGTPSAPSRSLSELCLAVPAPGIRTQGSPQE 922
Query: 596 SRDA--SREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPS-TWPCSQKEPGPPGV 650
+ + R + G GL + A + K +PS P Q EP PPGV
Sbjct: 923 AGPSWDCRGAPSPGSGPGLVGCL---AGEPAGSHRKRCGDLPSGASPRVQPEP-PPGV 976
>gi|111154080 pleckstrin homology domain containing family G member
5 isoform a [Homo sapiens]
Length = 1006
Score = 40.4 bits (93), Expect = 0.007
Identities = 74/298 (24%), Positives = 113/298 (37%), Gaps = 35/298 (11%)
Query: 372 PKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGDALYELFHDPSE 431
P S+QP +E + EE+++E E GT AA+ P + H S+
Sbjct: 695 PGSQQPLQSLEEEEDEQEEEEEE-EEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASD 753
Query: 432 GPLGPSPDDDLCVSESLSGPALGT-PLSICSFRVGAEENLAPA-PGPDLLSQGFLQSSWK 489
G + ++LS P + P S S + A P +LL G +
Sbjct: 754 GSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTSELLPLGPVD---- 809
Query: 490 GKECLLKLCDTELAITMGIVSWLRRGP----TPRAPPTPGQPAAPPGSQGAPRAPTEKLG 545
G+ C + L+ T + ++ GP PRAP +P P+ PP + R P + L
Sbjct: 810 GRSCSMDSAYGTLSPT-SLQDFVAPGPMAELVPRAPESPRVPSPPPSPRLRRRTPVQLLS 868
Query: 546 GREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKAL----------GGATQGTGTL 595
L A++ +L A GT G + S++L G TQG+
Sbjct: 869 CPPHLLKSKSEASLL------QLLAGAGTHGTPSAPSRSLSELCLAVPAPGIRTQGSPQE 922
Query: 596 SRDA--SREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPS-TWPCSQKEPGPPGV 650
+ + R + G GL + A + K +PS P Q EP PPGV
Sbjct: 923 AGPSWDCRGAPSPGSGPGLVGCL---AGEPAGSHRKRCGDLPSGASPRVQPEP-PPGV 976
>gi|111154078 pleckstrin homology domain containing family G member 5
isoform c [Homo sapiens]
Length = 1062
Score = 40.4 bits (93), Expect = 0.007
Identities = 74/298 (24%), Positives = 113/298 (37%), Gaps = 35/298 (11%)
Query: 372 PKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGDALYELFHDPSE 431
P S+QP +E + EE+++E E GT AA+ P + H S+
Sbjct: 751 PGSQQPLQSLEEEEDEQEEEEEE-EEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASD 809
Query: 432 GPLGPSPDDDLCVSESLSGPALGT-PLSICSFRVGAEENLAPA-PGPDLLSQGFLQSSWK 489
G + ++LS P + P S S + A P +LL G +
Sbjct: 810 GSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTSELLPLGPVD---- 865
Query: 490 GKECLLKLCDTELAITMGIVSWLRRGP----TPRAPPTPGQPAAPPGSQGAPRAPTEKLG 545
G+ C + L+ T + ++ GP PRAP +P P+ PP + R P + L
Sbjct: 866 GRSCSMDSAYGTLSPT-SLQDFVAPGPMAELVPRAPESPRVPSPPPSPRLRRRTPVQLLS 924
Query: 546 GREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKAL----------GGATQGTGTL 595
L A++ +L A GT G + S++L G TQG+
Sbjct: 925 CPPHLLKSKSEASLL------QLLAGAGTHGTPSAPSRSLSELCLAVPAPGIRTQGSPQE 978
Query: 596 SRDA--SREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPS-TWPCSQKEPGPPGV 650
+ + R + G GL + A + K +PS P Q EP PPGV
Sbjct: 979 AGPSWDCRGAPSPGSGPGLVGCL---AGEPAGSHRKRCGDLPSGASPRVQPEP-PPGV 1032
>gi|6912492 mitogen-activated protein kinase 8 interacting protein 2
isoform 1 [Homo sapiens]
Length = 824
Score = 40.4 bits (93), Expect = 0.007
Identities = 67/286 (23%), Positives = 103/286 (36%), Gaps = 49/286 (17%)
Query: 373 KSEQPESVSTSDEGY--YDSFSPGLEEDKKEAESPGTPAATFPRDSYSGDALYELFHDPS 430
+SEQP + + + + ++ EED ++ E GD E P+
Sbjct: 64 RSEQPHPICSFQDDFQEFEMIDDNEEEDDEDEEEEEEEEEGDGEGQEGGDPGSEA---PA 120
Query: 431 EGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKG 490
GPL PSP S+ P P ++ +GA+++L G DL+ +SW+
Sbjct: 121 PGPLIPSP--------SVEEPHKHRPTTLRLTTLGAQDSLNNNGGFDLVRP----ASWQ- 167
Query: 491 KECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGL 550
E A+ LR P P P P G+Q R + G R
Sbjct: 168 ----------ETALCSPAPEALRELPGP----LPATDTGPGGAQSPVRPGCDCEGNRPAE 213
Query: 551 ASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSE 610
GG ++PS + PG L S G + + LS S E+ G
Sbjct: 214 PPAPGG----TSPS-----SDPGIEADLRSRSSGGRGGRRSSQELSSPGSDSEDAGGARL 264
Query: 611 GLFSS------MESAATSTTDTSGKNKAPVPSTWPCSQ--KEPGPP 648
G S +E ++ + +SG++ S S EP PP
Sbjct: 265 GRMISSISETELELSSDGGSSSSGRSSHLTNSIEEASSPASEPEPP 310
>gi|7706537 mitogen-activated protein kinase 8 interacting protein 2
isoform 2 [Homo sapiens]
Length = 797
Score = 40.4 bits (93), Expect = 0.007
Identities = 67/286 (23%), Positives = 103/286 (36%), Gaps = 49/286 (17%)
Query: 373 KSEQPESVSTSDEGY--YDSFSPGLEEDKKEAESPGTPAATFPRDSYSGDALYELFHDPS 430
+SEQP + + + + ++ EED ++ E GD E P+
Sbjct: 37 RSEQPHPICSFQDDFQEFEMIDDNEEEDDEDEEEEEEEEEGDGEGQEGGDPGSEA---PA 93
Query: 431 EGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKG 490
GPL PSP S+ P P ++ +GA+++L G DL+ +SW+
Sbjct: 94 PGPLIPSP--------SVEEPHKHRPTTLRLTTLGAQDSLNNNGGFDLVRP----ASWQ- 140
Query: 491 KECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGL 550
E A+ LR P P P P G+Q R + G R
Sbjct: 141 ----------ETALCSPAPEALRELPGP----LPATDTGPGGAQSPVRPGCDCEGNRPAE 186
Query: 551 ASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSE 610
GG ++PS + PG L S G + + LS S E+ G
Sbjct: 187 PPAPGG----TSPS-----SDPGIEADLRSRSSGGRGGRRSSQELSSPGSDSEDAGGARL 237
Query: 611 GLFSS------MESAATSTTDTSGKNKAPVPSTWPCSQ--KEPGPP 648
G S +E ++ + +SG++ S S EP PP
Sbjct: 238 GRMISSISETELELSSDGGSSSSGRSSHLTNSIEEASSPASEPEPP 283
>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
Length = 1073
Score = 39.3 bits (90), Expect = 0.016
Identities = 124/515 (24%), Positives = 156/515 (30%), Gaps = 95/515 (18%)
Query: 187 PGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGL-CRALCEDVA-SLQSF 244
PGD PG R F P G DGL S LL+ L + +C D
Sbjct: 518 PGDKGSPGSRGLPGFPGPQGPAGRDGL------SSLLSPGDINLLAKDVCNDCPPGPPGL 571
Query: 245 DSLTGCGEVFADESSVPSLELNEGPESPTQAA--QGLESKVPRGPLQGSVEQLASPAQNE 302
L G F + VP EG E A GL QGS + + +
Sbjct: 572 PGLPG----FKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGE-- 625
Query: 303 ASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRSGS 362
V + Q + P GP G AG A P + G
Sbjct: 626 ----------VGQKGDQGHPGV--PGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGP 673
Query: 363 KASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRD-----SY 417
+G P E D PG + +A PG P R +
Sbjct: 674 PGPQGPSGLPGIPGEEGKEGRDG------KPGPPGEPGKAGEPGLPGPEGARGPPGFKGH 727
Query: 418 SGDALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGT----PLSICSFRVGAEENLAP- 472
+GD+ + GP G S L E L G T P R +N +P
Sbjct: 728 TGDS-------GAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPG 780
Query: 473 APGPDLLSQGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPG 532
+PG S Q KG+ + G+ +L PR PP PG
Sbjct: 781 SPGEPGPSGTPGQKGSKGENG-----------SPGLPGFLG----PRGPPGEPGEKGVPG 825
Query: 533 SQGAPRAPTEK----LGGREGLASDAGGATVCSAPSRQELWAHPGTTGL-----LAGESK 583
+G P P E G G+ D G P + H G TGL L GE+
Sbjct: 826 KEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENG 885
Query: 584 ALG-----GATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTW 638
+G G G S E R E L +E+ P+
Sbjct: 886 PVGPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMP------PAYM 939
Query: 639 PCSQKEPGPPGV---------LGCFRGPWRPGHGG 664
SQ PGPPG G P RPG GG
Sbjct: 940 KSSQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGG 974
Score = 34.7 bits (78), Expect = 0.39
Identities = 57/222 (25%), Positives = 66/222 (29%), Gaps = 53/222 (23%)
Query: 521 PPTPGQPAAP--PGSQGAPRAPTEKLG--GREGLASDAGGATVCSAPSRQELWAHPGTTG 576
P PG+P PG G P+ PT G G+EG G A AP H G G
Sbjct: 358 PGLPGEPGLQGRPGELG-PQGPTGPPGAKGQEGAHGAPGAAGNPGAPG------HVGAPG 410
Query: 577 LLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPS 636
GA GT +D R E+ EG
Sbjct: 411 PSGPPGSV--GAPGLRGTPGKDGERGEKGAAGEEG------------------------- 443
Query: 637 TWPCSQKEPGPPGVLGCFRGPWRPGHGGDTLDAEPMLAGCVARVAALKISSNEQP---PA 693
PGP G G P PG G D EP L G L + P
Sbjct: 444 -------SPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKGDRGAPGIPG 496
Query: 694 AWPPRQDMGSGLFGQRWARGPDMLEQKQSSSSPSMTTIHGLP 735
+ R D G G+ G GP SP + G P
Sbjct: 497 SPGSRGDPGIGVAGPPGPSGP-----PGDKGSPGSRGLPGFP 533
Score = 30.8 bits (68), Expect = 5.6
Identities = 43/170 (25%), Positives = 54/170 (31%), Gaps = 28/170 (16%)
Query: 521 PPTPGQPAAP--PGSQGAPRAPTEKLGGREGLASDAGGATVCSAP-------SRQELWA- 570
P PG P P G +G P P + G EG +AG + P S+ E A
Sbjct: 566 PGPPGLPGLPGFKGDKGVPGKPGRE--GTEGKKGEAGPPGLPGPPGIAGPQGSQGERGAD 623
Query: 571 ----------HPGTTGLLAGESK----ALGGATQGTGTLSRDASREEETRGHSEGLFSSM 616
HPG G + G G S +E +G S
Sbjct: 624 GEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQG--PSG 681
Query: 617 ESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGGDT 666
G++ P P P EPG PG G P GH GD+
Sbjct: 682 LPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDS 731
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 38.9 bits (89), Expect = 0.021
Identities = 70/327 (21%), Positives = 113/327 (34%), Gaps = 61/327 (18%)
Query: 359 RSGSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESP-GTPAATFPRDSY 417
R + +++ + P S S S E EE++ EAE+ TP S
Sbjct: 63 RKAEEDAALQAKKTRVSDPISTSESSE----------EEEEAEAETAKATPRLASTNSSV 112
Query: 418 SGDALYELFHDPSE---------GPLGPSPDDDLCVSESLSG--------PALGTPLSIC 460
G L + ++ G P P V+ LSG P+ T L
Sbjct: 113 LGADLPSSMKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSE 172
Query: 461 SFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRA 520
+ G+ A P ++S G SS + D E+ + I+ +
Sbjct: 173 TEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEVKASEKILQVRAASAPAKG 232
Query: 521 PPTPGQPAAPPGSQGAPRAPT---------------------EKLGGREGLASDAGGAT- 558
P G APPG GA + T E + L + A G T
Sbjct: 233 TPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTS 292
Query: 559 ---VCSAPSRQE-----LWAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSE 610
SAP+++ A PG TG +++A G + + + S ++ EEE ++
Sbjct: 293 QVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQA-GKREEDSQSSSEESDSEEEAPAQAK 351
Query: 611 --GLFSSMESAATSTTDTSGKNKAPVP 635
G + +A+ ++ K AP P
Sbjct: 352 PSGKAPQVRAASAPAKESPRKGAAPAP 378
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 38.9 bits (89), Expect = 0.021
Identities = 76/349 (21%), Positives = 118/349 (33%), Gaps = 71/349 (20%)
Query: 359 RSGSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESP-GTPAATFPRDSY 417
R + +++ + P S S S E EE++ EAE+ TP S
Sbjct: 63 RKAEEDAALQAKKTRVSDPISTSESSE----------EEEEAEAETAKATPRLASTNSSV 112
Query: 418 SGDALYELFHDPSE---------GPLGPSPDDDLCVSESLSG--------PALGTPLSIC 460
G L + ++ G P P V+ LSG P+ T L
Sbjct: 113 LGADLPSSMKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSE 172
Query: 461 SFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLKLCDTE-------LAITMGIVSWLR 513
+ G+ A P ++S G SS + D E + VS +
Sbjct: 173 TEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVS-TK 231
Query: 514 RGPTPRAPPTPGQPA---------APPGSQGAPRAPTEKLGGREGLASD----------- 553
P +A P PG+ A P ++ A + E EG S+
Sbjct: 232 ESPARKAAPAPGKVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQV 291
Query: 554 ----------AGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDASREE 603
A A P + A PG G +A ++KA G + + + S ++S E
Sbjct: 292 KASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKA-GKPEEDSESSSEESSDSE 350
Query: 604 ETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLG 652
E ++ L +++ A+ T G AP + P P PPG G
Sbjct: 351 EETPAAKAL---LQAKASGKTSQVGAASAPAKES-PRKGAAPAPPGKTG 395
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 38.9 bits (89), Expect = 0.021
Identities = 76/349 (21%), Positives = 118/349 (33%), Gaps = 71/349 (20%)
Query: 359 RSGSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESP-GTPAATFPRDSY 417
R + +++ + P S S S E EE++ EAE+ TP S
Sbjct: 63 RKAEEDAALQAKKTRVSDPISTSESSE----------EEEEAEAETAKATPRLASTNSSV 112
Query: 418 SGDALYELFHDPSE---------GPLGPSPDDDLCVSESLSG--------PALGTPLSIC 460
G L + ++ G P P V+ LSG P+ T L
Sbjct: 113 LGADLPSSMKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSE 172
Query: 461 SFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLKLCDTE-------LAITMGIVSWLR 513
+ G+ A P ++S G SS + D E + VS +
Sbjct: 173 TEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVS-TK 231
Query: 514 RGPTPRAPPTPGQPA---------APPGSQGAPRAPTEKLGGREGLASD----------- 553
P +A P PG+ A P ++ A + E EG S+
Sbjct: 232 ESPARKAAPAPGKVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQV 291
Query: 554 ----------AGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDASREE 603
A A P + A PG G +A ++KA G + + + S ++S E
Sbjct: 292 KASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKA-GKPEEDSESSSEESSDSE 350
Query: 604 ETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLG 652
E ++ L +++ A+ T G AP + P P PPG G
Sbjct: 351 EETPAAKAL---LQAKASGKTSQVGAASAPAKES-PRKGAAPAPPGKTG 395
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
[Homo sapiens]
Length = 1411
Score = 38.9 bits (89), Expect = 0.021
Identities = 70/327 (21%), Positives = 113/327 (34%), Gaps = 61/327 (18%)
Query: 359 RSGSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESP-GTPAATFPRDSY 417
R + +++ + P S S S E EE++ EAE+ TP S
Sbjct: 63 RKAEEDAALQAKKTRVSDPISTSESSE----------EEEEAEAETAKATPRLASTNSSV 112
Query: 418 SGDALYELFHDPSE---------GPLGPSPDDDLCVSESLSG--------PALGTPLSIC 460
G L + ++ G P P V+ LSG P+ T L
Sbjct: 113 LGADLPSSMKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSE 172
Query: 461 SFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRA 520
+ G+ A P ++S G SS + D E+ + I+ +
Sbjct: 173 TEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEVKASEKILQVRAASAPAKG 232
Query: 521 PPTPGQPAAPPGSQGAPRAPT---------------------EKLGGREGLASDAGGAT- 558
P G APPG GA + T E + L + A G T
Sbjct: 233 TPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTS 292
Query: 559 ---VCSAPSRQE-----LWAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSE 610
SAP+++ A PG TG +++A G + + + S ++ EEE ++
Sbjct: 293 QVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQA-GKREEDSQSSSEESDSEEEAPAQAK 351
Query: 611 --GLFSSMESAATSTTDTSGKNKAPVP 635
G + +A+ ++ K AP P
Sbjct: 352 PSGKAPQVRAASAPAKESPRKGAAPAP 378
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
[Homo sapiens]
Length = 1450
Score = 38.9 bits (89), Expect = 0.021
Identities = 76/349 (21%), Positives = 118/349 (33%), Gaps = 71/349 (20%)
Query: 359 RSGSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESP-GTPAATFPRDSY 417
R + +++ + P S S S E EE++ EAE+ TP S
Sbjct: 63 RKAEEDAALQAKKTRVSDPISTSESSE----------EEEEAEAETAKATPRLASTNSSV 112
Query: 418 SGDALYELFHDPSE---------GPLGPSPDDDLCVSESLSG--------PALGTPLSIC 460
G L + ++ G P P V+ LSG P+ T L
Sbjct: 113 LGADLPSSMKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSE 172
Query: 461 SFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLKLCDTE-------LAITMGIVSWLR 513
+ G+ A P ++S G SS + D E + VS +
Sbjct: 173 TEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVS-TK 231
Query: 514 RGPTPRAPPTPGQPA---------APPGSQGAPRAPTEKLGGREGLASD----------- 553
P +A P PG+ A P ++ A + E EG S+
Sbjct: 232 ESPARKAAPAPGKVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQV 291
Query: 554 ----------AGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDASREE 603
A A P + A PG G +A ++KA G + + + S ++S E
Sbjct: 292 KASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKA-GKPEEDSESSSEESSDSE 350
Query: 604 ETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLG 652
E ++ L +++ A+ T G AP + P P PPG G
Sbjct: 351 EETPAAKAL---LQAKASGKTSQVGAASAPAKES-PRKGAAPAPPGKTG 395
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.130 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,685,166
Number of Sequences: 37866
Number of extensions: 2567708
Number of successful extensions: 14897
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 442
Number of HSP's that attempted gapping in prelim test: 12156
Number of HSP's gapped (non-prelim): 2959
length of query: 861
length of database: 18,247,518
effective HSP length: 111
effective length of query: 750
effective length of database: 14,044,392
effective search space: 10533294000
effective search space used: 10533294000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.