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Search of human proteins with 157388935
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157388935 hypothetical protein LOC55026 isoform 3 [Homo
sapiens]
(241 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157388935 hypothetical protein LOC55026 isoform 3 [Homo sapiens] 499 e-142
gi|239757890 PREDICTED: similar to family with sequence similari... 278 4e-75
gi|157388933 hypothetical protein LOC55026 isoform 2 [Homo sapiens] 278 4e-75
gi|157388931 hypothetical protein LOC55026 isoform 1 [Homo sapiens] 278 4e-75
gi|32699048 family with sequence similarity 70, member B [Homo s... 172 2e-43
gi|239750593 PREDICTED: hypothetical protein XP_002347442 [Homo ... 72 6e-13
gi|59806357 submaxillary gland androgen regulated protein 3 homo... 49 4e-06
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 45 6e-05
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 42 6e-04
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 42 6e-04
gi|51173727 Sma- and Mad-related protein 1 [Homo sapiens] 40 0.001
gi|5174509 Sma- and Mad-related protein 1 [Homo sapiens] 40 0.001
gi|55750053 atrophin-1 [Homo sapiens] 40 0.002
gi|55750041 atrophin-1 [Homo sapiens] 40 0.002
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap... 39 0.005
gi|150417989 cyclin K isoform 1 [Homo sapiens] 39 0.005
gi|120952764 mastermind-like domain containing 1 [Homo sapiens] 38 0.007
gi|47778931 SMAD, mothers against DPP homolog 5 [Homo sapiens] 37 0.015
gi|47778929 SMAD, mothers against DPP homolog 5 [Homo sapiens] 37 0.015
gi|47778925 SMAD, mothers against DPP homolog 5 [Homo sapiens] 37 0.015
gi|21361937 proline rich 7 (synaptic) [Homo sapiens] 37 0.015
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.020
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens] 37 0.020
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens] 37 0.020
gi|148613878 acrosin precursor [Homo sapiens] 37 0.020
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 36 0.026
gi|94421475 paternally expressed 10 isoform RF1/2 [Homo sapiens] 36 0.026
gi|166706915 GLIS family zinc finger 1 [Homo sapiens] 36 0.026
gi|15029506 homeobox D8 [Homo sapiens] 36 0.034
gi|169163027 PREDICTED: similar to Putative acrosin-like proteas... 36 0.034
>gi|157388935 hypothetical protein LOC55026 isoform 3 [Homo sapiens]
Length = 241
Score = 499 bits (1285), Expect = e-142
Identities = 241/241 (100%), Positives = 241/241 (100%)
Query: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG
Sbjct: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
Query: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL
Sbjct: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
Query: 121 KPLYANRCHYVPKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHL 180
KPLYANRCHYVPKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHL
Sbjct: 121 KPLYANRCHYVPKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHL 180
Query: 181 PPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYS 240
PPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYS
Sbjct: 181 PPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYS 240
Query: 241 P 241
P
Sbjct: 241 P 241
>gi|239757890 PREDICTED: similar to family with sequence similarity
70, member A [Homo sapiens]
Length = 377
Score = 278 bits (710), Expect = 4e-75
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG
Sbjct: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
Query: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL
Sbjct: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
Query: 121 KPLYANRCHYVPKTSQKEAEE 141
KPLYANRCHYVPKTSQKEAEE
Sbjct: 121 KPLYANRCHYVPKTSQKEAEE 141
Score = 213 bits (543), Expect = 9e-56
Identities = 95/95 (100%), Positives = 95/95 (100%)
Query: 142 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG 201
NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG
Sbjct: 226 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG 285
Query: 202 LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKP 236
LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKP
Sbjct: 286 LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKP 320
>gi|157388933 hypothetical protein LOC55026 isoform 2 [Homo sapiens]
Length = 325
Score = 278 bits (710), Expect = 4e-75
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG
Sbjct: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
Query: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL
Sbjct: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
Query: 121 KPLYANRCHYVPKTSQKEAEE 141
KPLYANRCHYVPKTSQKEAEE
Sbjct: 121 KPLYANRCHYVPKTSQKEAEE 141
Score = 226 bits (575), Expect = 2e-59
Identities = 100/100 (100%), Positives = 100/100 (100%)
Query: 142 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG 201
NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG
Sbjct: 226 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG 285
Query: 202 LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 241
LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP
Sbjct: 286 LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 325
>gi|157388931 hypothetical protein LOC55026 isoform 1 [Homo sapiens]
Length = 349
Score = 278 bits (710), Expect = 4e-75
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG
Sbjct: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
Query: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL
Sbjct: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
Query: 121 KPLYANRCHYVPKTSQKEAEE 141
KPLYANRCHYVPKTSQKEAEE
Sbjct: 121 KPLYANRCHYVPKTSQKEAEE 141
Score = 226 bits (575), Expect = 2e-59
Identities = 100/100 (100%), Positives = 100/100 (100%)
Query: 142 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG 201
NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG
Sbjct: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG 309
Query: 202 LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 241
LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP
Sbjct: 310 LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 349
>gi|32699048 family with sequence similarity 70, member B [Homo
sapiens]
Length = 326
Score = 172 bits (436), Expect = 2e-43
Identities = 83/118 (70%), Positives = 101/118 (85%)
Query: 13 MSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVGGYYPGVILGFGS 72
+ L D +RRK+ S++ +LL+VSVLI+TVGLAATTRT+NVTVGGYYPG+ILGFGS
Sbjct: 9 LGLLDPAEGLSRRKKTSLWFVGSLLLVSVLIVTVGLAATTRTENVTVGGYYPGIILGFGS 68
Query: 73 FLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDLKPLYANRCHY 130
FLGIIG NL+EN+RQMLVA+IVFISFGV+AAFCCAIVDGVFAA+HI+ +PL RC +
Sbjct: 69 FLGIIGINLVENRRQMLVAAIVFISFGVVAAFCCAIVDGVFAAQHIEPRPLTTGRCQF 126
Score = 65.1 bits (157), Expect = 5e-11
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 32/174 (18%)
Query: 73 FLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDLKPLYANRCHYVP 132
F+G+ G + + ++L AS V G+ A V G F D+ PL
Sbjct: 180 FIGVSGCQDVLHLYRLLWASAVLNVLGLFLGIITAAVLGAFK----DMVPL--------- 226
Query: 133 KTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDF--QH 190
+ P +P P Y Q+ +Y + +P +P S+Y Q
Sbjct: 227 ----SQLAYGPAVP----------PQTLYNPAQQILAYAGFRLTPEPVPTCSSYPLPLQP 272
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSS---SAPPRYSPPYYPPFEKPPPYSP 241
FP +P S L+ PSPS S APP Y+P Y+PP EKPPPY+P
Sbjct: 273 CSRFPVAPSSALASSEDLQPPSPSSSGSGLPGQAPPCYAPTYFPPGEKPPPYAP 326
>gi|239750593 PREDICTED: hypothetical protein XP_002347442 [Homo
sapiens]
Length = 135
Score = 71.6 bits (174), Expect = 6e-13
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 13 MSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVGGYYPGVIL 68
+ L D +RRK+ S++ +LL+VSVLI+TVGLAATTRT+NVTVGGYYPG+I+
Sbjct: 9 LGLLDPAEGLSRRKKTSLWFVGSLLLVSVLIVTVGLAATTRTENVTVGGYYPGIIV 64
>gi|59806357 submaxillary gland androgen regulated protein 3 homolog
A precursor [Homo sapiens]
Length = 134
Score = 48.9 bits (115), Expect = 4e-06
Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 165 PQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASP--SPSYMWSSSAP 222
P + T + PPH PPY F P SPP G P S P P + S S P
Sbjct: 40 PPCFPFGTGFVPPPHPPPYGPGRFPP----PLSPPYGPGRIPPSPPPPYGPGRIQSHSLP 95
Query: 223 PRYSPPYYPPFEKPPPYSP 241
P Y P Y P +P PY P
Sbjct: 96 PPYGPGYPQPPSQPRPYPP 114
Score = 29.3 bits (64), Expect = 3.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 206 PQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 241
P + P P + + + P PP Y P PPP SP
Sbjct: 34 PLAPPPPPCFPFGTGFVPPPHPPPYGPGRFPPPLSP 69
Score = 28.5 bits (62), Expect = 5.5
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 198 PPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 241
PP L+ P P + PP Y P +PP PPY P
Sbjct: 31 PPGPLAPPPPPCFPFGTGFVPPPHPPPYGPGRFPP-PLSPPYGP 73
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 45.1 bits (105), Expect = 6e-05
Identities = 39/113 (34%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + N PT Y+ P SY+ S P P YS +
Sbjct: 1613 PSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S PS P+ S P S S SP+ S P YSP P Y P P YSP
Sbjct: 1672 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSYSP 1722
Score = 43.1 bits (100), Expect = 2e-04
Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + + PT Y+ P SY+ S P P YS +
Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSY 1685
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S PS P+ S P S S SP+ S P YSP P Y P P YSP
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSYSP 1736
Score = 43.1 bits (100), Expect = 2e-04
Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + + PT Y+ P SY+ S P P YS +
Sbjct: 1634 PNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSY 1692
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S PS P+ S P S S SP+ S P YSP P Y P P YSP
Sbjct: 1693 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSYSP 1743
Score = 42.7 bits (99), Expect = 3e-04
Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + + PT Y+ P SY+ S P P YS +
Sbjct: 1641 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSY 1699
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S PS P+ S P S S SP+ S P YSP P Y P P YSP
Sbjct: 1700 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPNYSP 1750
Score = 42.0 bits (97), Expect = 5e-04
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + + PT Y+ P SY+ S P P YS +
Sbjct: 1662 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S PS P+ S P S S SP+ S P Y+P P Y P P YSP
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP--TSPSYSP 1771
Score = 42.0 bits (97), Expect = 5e-04
Identities = 37/113 (32%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + N PT Y P SY+ S P P Y+ +
Sbjct: 1725 PSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYT-PTSPSYSPTSPSYSPTSPNYTPTSPNY 1783
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S PS P+ S P S S SPS + P Y+P P Y P P YSP
Sbjct: 1784 SPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSP 1834
Score = 42.0 bits (97), Expect = 5e-04
Identities = 39/120 (32%), Positives = 49/120 (40%), Gaps = 13/120 (10%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYN--------TYYHSPPHLPPY 183
P S +PT P + + N PT Y+ P SY+ T + P P Y
Sbjct: 1732 PSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYS-PTSPSYSPTSPNYTPTSPNYSPTSPSY 1790
Query: 184 SAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S +S PS PS PQS + +PS S + P YSP P Y P P YSP
Sbjct: 1791 SPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTP--TSPSYSP 1848
Score = 41.2 bits (95), Expect = 8e-04
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P + +PT P+ + + N PT Y+ P SY+ S P P YS ++
Sbjct: 1753 PNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYS-PTSPSYSPTSPSYSPTSPSYSPSSPRY 1811
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
+ P+ PS S P S S SP+ + P YSP P Y P P YSP
Sbjct: 1812 TPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTP--TSPKYSP 1862
Score = 40.8 bits (94), Expect = 0.001
Identities = 40/116 (34%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + + PT Y+ P SY+ S P P YS +
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 191 SGVFPSSPPSGLSDEPQSAS---PSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S PS P+ S P S S SPSY S P YSP P Y P P YSP
Sbjct: 1714 SPTSPSYSPTSPSYSPTSPSYSPTSPSY---SPTSPNYSPTSPNYTP--TSPSYSP 1764
Score = 40.8 bits (94), Expect = 0.001
Identities = 36/113 (31%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + + PT Y+ P SY+ S P P YS +
Sbjct: 1690 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S P+ P+ S P S S SP+ + P YSP P Y P P YSP
Sbjct: 1749 SPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP--TSPSYSP 1799
Score = 40.8 bits (94), Expect = 0.001
Identities = 38/116 (32%), Positives = 44/116 (37%), Gaps = 9/116 (7%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHS 191
P S +PT P + N PT Y+ P SY+ SP + P Y Q
Sbjct: 1760 PSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYS-PTSPSYSPT--SPSYSPSSPRYTPQSP 1816
Query: 192 GVFPSSP------PSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 241
PSSP PS P+ SPSY SS SP Y P K P SP
Sbjct: 1817 TYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Score = 40.4 bits (93), Expect = 0.001
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + + P+ Y PQ +Y S P P YS ++
Sbjct: 1781 PNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYT-PQSPTYTPSSPSYSPSSPSYSPTSPKY 1839
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
+ PS PS P S SP+ S P+YSP P Y P P YSP
Sbjct: 1840 TPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP--TTPKYSP 1890
Score = 40.0 bits (92), Expect = 0.002
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYN-TYYHSPPHLPPYSAYDFQH 190
P S +PT P+ + + + PT Y+ P +Y+ T + P P YS +
Sbjct: 1711 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPNYSPTSPNYTPTSPSYSPTSPSY 1769
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S P+ P+ + P S S SP+ S P YSP P Y P + P Y+P
Sbjct: 1770 SPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP--QSPTYTP 1820
Score = 38.9 bits (89), Expect = 0.004
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + + PT Y+ P SY+ S P P YS +
Sbjct: 1669 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSY 1727
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S PS P+ S P S + SP+ + P YSP P Y P P Y+P
Sbjct: 1728 SPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP--TSPNYTP 1778
Score = 38.9 bits (89), Expect = 0.004
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + + PT Y+ P SY+ S P P YS +
Sbjct: 1697 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPNYSPTSPNY 1755
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
+ PS P+ S P S + +P+ S P YSP P Y P P YSP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP--TSPSYSP 1806
Score = 38.5 bits (88), Expect = 0.005
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYN-TYYHSPPHLPPYSAYDFQH 190
P S +PT P+ + + + PT Y+ P SY+ T + P P Y+ +
Sbjct: 1704 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPNYSPTSPNYTPTSPSY 1762
Query: 191 SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S PS P+ + P S + SP+ S P YSP P Y P P Y+P
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP--SSPRYTP 1813
Score = 37.7 bits (86), Expect = 0.009
Identities = 38/116 (32%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + + PT Y+ P SY+ S P P YS +
Sbjct: 1676 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSY 1734
Query: 191 SGVFPSSPPSGLSDEPQSAS---PSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S PS P+ + P S + SPSY S P YSP P Y P P YSP
Sbjct: 1735 SPTSPSYSPTSPNYSPTSPNYTPTSPSY---SPTSPSYSPTSPNYTP--TSPNYSP 1785
Score = 37.0 bits (84), Expect = 0.015
Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQH 190
P S +PT P+ + + + PT Y+ P SY+ S P P YS +
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSY 1741
Query: 191 SGVFPSSPPSGLSDEPQSAS---PSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S P+ P+ + P S S SPSY S P Y+P P Y P P YSP
Sbjct: 1742 SPTSPNYSPTSPNYTPTSPSYSPTSPSY---SPTSPNYTPTSPNYSP--TSPSYSP 1792
Score = 36.2 bits (82), Expect = 0.026
Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 11/123 (8%)
Query: 122 PLYANRCHYVPKTSQKEAEENPTLPALNCSVENTH-PTVSYYAHPQVASYNTYYHSPPHL 180
P Y+ P + +P +P+ ++ ++ PT Y Y P
Sbjct: 1559 PGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT------PQS 1612
Query: 181 PPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPP 238
P YS +S PS P+ + P S S SP+ S P YSP P Y P P
Sbjct: 1613 PSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPS 1670
Query: 239 YSP 241
YSP
Sbjct: 1671 YSP 1673
Score = 36.2 bits (82), Expect = 0.026
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 16/118 (13%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHS 191
P S PT P+ + + + PT Y P +Y+ SP + P +Y
Sbjct: 1746 PNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT-PTSPNYSPT--SPSYSPTSPSYSPTSP 1802
Query: 192 GVFPSSP------PSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
PSSP P+ P + SPSY S P+Y+P P Y P P Y+P
Sbjct: 1803 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSY---SPTSPKYTPTSPSYSP--SSPEYTP 1855
Score = 35.4 bits (80), Expect = 0.045
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHS 191
P+ + + P+ P+ + S + PT Y P SY+ P P Y+ ++S
Sbjct: 1809 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYT-PTSPSYS------PSSPEYTPTSPKYS 1861
Query: 192 GVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPP---YYPPFEKPPPYSP 241
P P+ P S + SP+ S P YSP Y P K P SP
Sbjct: 1862 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSP 1914
Score = 34.7 bits (78), Expect = 0.076
Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 3/113 (2%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHS 191
P S + PT P+ + S PT Y+ T P P YS ++S
Sbjct: 1830 PSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYS 1889
Query: 192 GVFPSSPPSG---LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 241
P+ P+ P+ + SP+Y +S SP Y P K YSP
Sbjct: 1890 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 34.3 bits (77), Expect = 0.099
Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 13/120 (10%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYN--TYYHSP------PHLPPY 183
P S +PT P+ + S P Y P SY+ + +SP P P Y
Sbjct: 1788 PSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYT-PSSPSYSPSSPSYSPTSPKYTPTSPSY 1846
Query: 184 SAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 241
S +++ P P+ P S SP+ S P+YSP P Y P P Y+P
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP--TSPVYTP 1904
Score = 28.9 bits (63), Expect = 4.2
Identities = 26/106 (24%), Positives = 36/106 (33%)
Query: 122 PLYANRCHYVPKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLP 181
P Y+ TS K + +PT T PT S + + Y + P
Sbjct: 1858 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYS 1917
Query: 182 PYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP 227
P S S + + P G + P S SP+ S P SP
Sbjct: 1918 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1963
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 41.6 bits (96), Expect = 6e-04
Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 177 PPHLPPYSAYDFQHSGVF------PSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYY 230
PP PP YD+ F PSS S S S+S S S SSS + PP
Sbjct: 68 PPPQPPPPQYDYPPQSTFKPKAEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPDPPLP 127
Query: 231 PPFEKPPP 238
P F PPP
Sbjct: 128 PAFGAPPP 135
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 41.6 bits (96), Expect = 6e-04
Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 177 PPHLPPYSAYDFQHSGVF------PSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYY 230
PP PP YD+ F PSS S S S+S S S SSS + PP
Sbjct: 68 PPPQPPPPQYDYPPQSTFKPKAEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPDPPLP 127
Query: 231 PPFEKPPP 238
P F PPP
Sbjct: 128 PAFGAPPP 135
>gi|51173727 Sma- and Mad-related protein 1 [Homo sapiens]
Length = 465
Score = 40.4 bits (93), Expect = 0.001
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 26/137 (18%)
Query: 117 HIDLKPLYANRCHYVPKTSQKEA---------EENPTLPALNCSVENTHPTVSYY--AHP 165
H +LKPL C + + QKE E+P LP + P S Y H
Sbjct: 100 HHELKPLEC--CEFPFGSKQKEVCINPYHYKRVESPVLPPVLV------PRHSEYNPQHS 151
Query: 166 QVASYNTYYHSPPHLPPYSAY--DFQ--HSGVFPSSPPSGLSDEPQSASPSPSYMWSSSA 221
+A + + PH+P + + FQ +S FP SP S + P S+S + + +SS
Sbjct: 152 LLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHSPTSSD 211
Query: 222 PPRYSPPYYPPFEKPPP 238
P P+ P + PPP
Sbjct: 212 P---GSPFQMPADTPPP 225
>gi|5174509 Sma- and Mad-related protein 1 [Homo sapiens]
Length = 465
Score = 40.4 bits (93), Expect = 0.001
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 26/137 (18%)
Query: 117 HIDLKPLYANRCHYVPKTSQKEA---------EENPTLPALNCSVENTHPTVSYY--AHP 165
H +LKPL C + + QKE E+P LP + P S Y H
Sbjct: 100 HHELKPLEC--CEFPFGSKQKEVCINPYHYKRVESPVLPPVLV------PRHSEYNPQHS 151
Query: 166 QVASYNTYYHSPPHLPPYSAY--DFQ--HSGVFPSSPPSGLSDEPQSASPSPSYMWSSSA 221
+A + + PH+P + + FQ +S FP SP S + P S+S + + +SS
Sbjct: 152 LLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHSPTSSD 211
Query: 222 PPRYSPPYYPPFEKPPP 238
P P+ P + PPP
Sbjct: 212 P---GSPFQMPADTPPP 225
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 39.7 bits (91), Expect = 0.002
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 154 NTHPTVSYYAHPQVASYNTYYHSPPHL-PPYSAYDFQHSGVFPSSPPSGLSDEPQSASPS 212
++H Y P + S Y P HL PP+S + +G P+ PP S S++
Sbjct: 523 SSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAG--PNGPPVSSSSNSSSSTSQ 580
Query: 213 PSYMWSSSAP---PRYSPPYYPP 232
SY S +P P+ +P +PP
Sbjct: 581 GSYPCSHPSPSQGPQGAPYPFPP 603
Score = 32.3 bits (72), Expect = 0.38
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 176 SPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSAS----------PSPSYMWSSSAPPRY 225
+PP PYS+ + SS S S P AS P P+ + S+ PP+Y
Sbjct: 368 APPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKY 427
Query: 226 SPPYYPP----FEKPPPYSP 241
+ P P + PPP P
Sbjct: 428 TQPSLPSQAVWSQGPPPPPP 447
Score = 29.3 bits (64), Expect = 3.2
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Query: 146 PALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYS---AYDFQHSGVFPSS 197
P + SV N P Y P + S + PP PPY A H G FP S
Sbjct: 414 PPTSLSVSNQPPK---YTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPS 465
Score = 28.9 bits (63), Expect = 4.2
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 13/59 (22%)
Query: 196 SSPPSGLSDEPQSASPS-------------PSYMWSSSAPPRYSPPYYPPFEKPPPYSP 241
SS P + + +S SPS S + A P + PP +PP +PP +P
Sbjct: 118 SSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTP 176
Score = 28.1 bits (61), Expect = 7.1
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 8/71 (11%)
Query: 176 SPPHLPPYSA--------YDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP 227
SP LPP S+ + + S ++ S S SASP P+ S P + P
Sbjct: 355 SPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPP 414
Query: 228 PYYPPFEKPPP 238
P PP
Sbjct: 415 PTSLSVSNQPP 425
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 39.7 bits (91), Expect = 0.002
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 154 NTHPTVSYYAHPQVASYNTYYHSPPHL-PPYSAYDFQHSGVFPSSPPSGLSDEPQSASPS 212
++H Y P + S Y P HL PP+S + +G P+ PP S S++
Sbjct: 523 SSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAG--PNGPPVSSSSNSSSSTSQ 580
Query: 213 PSYMWSSSAP---PRYSPPYYPP 232
SY S +P P+ +P +PP
Sbjct: 581 GSYPCSHPSPSQGPQGAPYPFPP 603
Score = 32.3 bits (72), Expect = 0.38
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 176 SPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSAS----------PSPSYMWSSSAPPRY 225
+PP PYS+ + SS S S P AS P P+ + S+ PP+Y
Sbjct: 368 APPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKY 427
Query: 226 SPPYYPP----FEKPPPYSP 241
+ P P + PPP P
Sbjct: 428 TQPSLPSQAVWSQGPPPPPP 447
Score = 29.3 bits (64), Expect = 3.2
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Query: 146 PALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYS---AYDFQHSGVFPSS 197
P + SV N P Y P + S + PP PPY A H G FP S
Sbjct: 414 PPTSLSVSNQPPK---YTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPS 465
Score = 28.9 bits (63), Expect = 4.2
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 13/59 (22%)
Query: 196 SSPPSGLSDEPQSASPS-------------PSYMWSSSAPPRYSPPYYPPFEKPPPYSP 241
SS P + + +S SPS S + A P + PP +PP +PP +P
Sbjct: 118 SSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTP 176
Score = 28.1 bits (61), Expect = 7.1
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 8/71 (11%)
Query: 176 SPPHLPPYSA--------YDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP 227
SP LPP S+ + + S ++ S S SASP P+ S P + P
Sbjct: 355 SPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPP 414
Query: 228 PYYPPFEKPPP 238
P PP
Sbjct: 415 PTSLSVSNQPP 425
>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sapiens]
Length = 2365
Score = 38.5 bits (88), Expect = 0.005
Identities = 32/106 (30%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Query: 129 HYVPKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQV-ASYNTYYHSP-PHLPPYSAY 186
H P++S + N A + S H + S + P A+Y SP P PP +
Sbjct: 958 HDPPQSSFGPTQYNLPSRATSSSHNPGHQSTSRTSSPVYPAAYGAPLTSPEPSQPPCAVC 1017
Query: 187 DFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPP 232
SSPP L +P P P S PP + PPY PP
Sbjct: 1018 IGHRDAPRASSPPRYLQHDPFPFFPEPRA--PESEPPHHEPPYIPP 1061
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 38.5 bits (88), Expect = 0.005
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 165 PQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPR 224
P + Y P HLP H V+P +PP P ++ P P+ + P
Sbjct: 456 PSYGALPPAYGPPAHLP-------YHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPP 508
Query: 225 YSPPYYPPFEKPPPYSP 241
P Y P F PPP P
Sbjct: 509 PPPTYNPNFPPPPPRLP 525
Score = 29.6 bits (65), Expect = 2.5
Identities = 26/85 (30%), Positives = 29/85 (34%), Gaps = 25/85 (29%)
Query: 157 PTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYM 216
PT Y P + N + PP LPP A P PP GL P S
Sbjct: 502 PTPGYPPPPPTYNPN-FPPPPPRLPPTHAV--------PPHPPPGLGLPPAS-------- 544
Query: 217 WSSSAPPRYSPPYYPPFEKPPPYSP 241
Y PP PP +PP P
Sbjct: 545 --------YPPPAVPPGGQPPVPPP 561
>gi|120952764 mastermind-like domain containing 1 [Homo sapiens]
Length = 774
Score = 38.1 bits (87), Expect = 0.007
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 177 PPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYP-PFEK 235
P LPP + H+ + S + P+PS WS PP SPPY P P
Sbjct: 290 PVALPPLPVPQWHHAHQLKALAASKQGSATKQQGPTPS--WSGLPPPGLSPPYRPVPSPH 347
Query: 236 PPP 238
PPP
Sbjct: 348 PPP 350
>gi|47778931 SMAD, mothers against DPP homolog 5 [Homo sapiens]
Length = 465
Score = 37.0 bits (84), Expect = 0.015
Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 25/139 (17%)
Query: 117 HIDLKPLYANRCHYVPKTSQKEA---------EENPTLPALNCSVENTHPTVSYYAHPQV 167
H +LKPL + C + + QKE E+P LP + N H +
Sbjct: 101 HHELKPL--DICEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHNEFNP----QHSLL 154
Query: 168 ASYNTYYHSPPHLPPYSAY-DFQH---SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPP 223
+ H+ PH+P + + D H + FP SP S P SP+ S +S A
Sbjct: 155 VQFRNLSHNEPHMPQNATFPDSFHQPNNTPFPLSPNS-----PYPPSPASSTYPNSPASS 209
Query: 224 RYSPPYYPPFEKPPP-YSP 241
P+ P + PPP Y P
Sbjct: 210 GPGSPFQLPADTPPPAYMP 228
>gi|47778929 SMAD, mothers against DPP homolog 5 [Homo sapiens]
Length = 465
Score = 37.0 bits (84), Expect = 0.015
Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 25/139 (17%)
Query: 117 HIDLKPLYANRCHYVPKTSQKEA---------EENPTLPALNCSVENTHPTVSYYAHPQV 167
H +LKPL + C + + QKE E+P LP + N H +
Sbjct: 101 HHELKPL--DICEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHNEFNP----QHSLL 154
Query: 168 ASYNTYYHSPPHLPPYSAY-DFQH---SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPP 223
+ H+ PH+P + + D H + FP SP S P SP+ S +S A
Sbjct: 155 VQFRNLSHNEPHMPQNATFPDSFHQPNNTPFPLSPNS-----PYPPSPASSTYPNSPASS 209
Query: 224 RYSPPYYPPFEKPPP-YSP 241
P+ P + PPP Y P
Sbjct: 210 GPGSPFQLPADTPPPAYMP 228
>gi|47778925 SMAD, mothers against DPP homolog 5 [Homo sapiens]
Length = 465
Score = 37.0 bits (84), Expect = 0.015
Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 25/139 (17%)
Query: 117 HIDLKPLYANRCHYVPKTSQKEA---------EENPTLPALNCSVENTHPTVSYYAHPQV 167
H +LKPL + C + + QKE E+P LP + N H +
Sbjct: 101 HHELKPL--DICEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHNEFNP----QHSLL 154
Query: 168 ASYNTYYHSPPHLPPYSAY-DFQH---SGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPP 223
+ H+ PH+P + + D H + FP SP S P SP+ S +S A
Sbjct: 155 VQFRNLSHNEPHMPQNATFPDSFHQPNNTPFPLSPNS-----PYPPSPASSTYPNSPASS 209
Query: 224 RYSPPYYPPFEKPPP-YSP 241
P+ P + PPP Y P
Sbjct: 210 GPGSPFQLPADTPPPAYMP 228
>gi|21361937 proline rich 7 (synaptic) [Homo sapiens]
Length = 274
Score = 37.0 bits (84), Expect = 0.015
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 162 YAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSA 221
++HP V + +H P P A+ H P PP+ LS P+ S S
Sbjct: 91 HSHPHVHVHPLLHHGPAQ-PHAHAHPHPHHHALPHPPPTHLSVPPRPWSYPRQAESDMSK 149
Query: 222 PPRYSPPYYPPFEKPPPYS 240
PP Y E PPPYS
Sbjct: 150 PPCYEEAVLMA-EPPPPYS 167
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 36.6 bits (83), Expect = 0.020
Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Query: 176 SPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSY---MWSSSAPPRYSPP--YY 230
SPP PP S S PS P L+ P PSP M S+ PP +PP
Sbjct: 678 SPPASPPVSP-----SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 732
Query: 231 PPFEKP--PPYSP 241
PP + P PP SP
Sbjct: 733 PPLQVPPSPPASP 745
Score = 32.7 bits (73), Expect = 0.29
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 177 PPHLPPYSAYD-FQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAP--PRYSPPYYPPF 233
PP PP A Q P+SPP P +P+ + AP P SPP PF
Sbjct: 618 PPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF 677
Query: 234 EKP--PPYSP 241
P PP SP
Sbjct: 678 SPPASPPVSP 687
Score = 30.8 bits (68), Expect = 1.1
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 199 PSGLSDEPQSASPSPSYMWSSSAPPRY----SPPYYPPFEKPP 237
P+ L P A+P P S SAPP SPP PP + PP
Sbjct: 328 PATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPP 370
Score = 30.0 bits (66), Expect = 1.9
Identities = 28/106 (26%), Positives = 37/106 (34%), Gaps = 7/106 (6%)
Query: 132 PKTSQKEAEENPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHS 191
P+ + + P L L+ S T A P N P LPP +
Sbjct: 283 PQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPL----A 338
Query: 192 GVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPP 237
P +PPS + PSP S APP + PP + PP
Sbjct: 339 TPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTT---PPMQAPP 381
Score = 29.6 bits (65), Expect = 2.5
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 13/60 (21%)
Query: 195 PSSPPSGLSDEPQSASP-SPSYMWSSSAPPRY---------SPPYYPPFE---KPPPYSP 241
P SPP P ++ P SPS S APP SPP PP PPP +P
Sbjct: 668 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 727
Score = 29.3 bits (64), Expect = 3.2
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 195 PSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPY-YPPFEKP--PPYSP 241
P +PP+ L+ P PSP ++ PP+ P PP + P PP SP
Sbjct: 592 PQAPPA-LASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASP 640
Score = 29.3 bits (64), Expect = 3.2
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 10/67 (14%)
Query: 176 SPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPS----YMWSSSAPPRYSPPY-Y 230
SPP PP S S P P L+ P PSP S++ PPR P
Sbjct: 709 SPPASPPMSP-----SATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAA 763
Query: 231 PPFEKPP 237
PP + PP
Sbjct: 764 PPLQVPP 770
Score = 29.3 bits (64), Expect = 3.2
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 195 PSSPPSGLSDEPQSASPSPSYMWSSSAP--PRYSPPYYPPFEKPPPYSP 241
P +PP+ L+ P A PSP + AP P S P P PPP +P
Sbjct: 786 PQAPPA-LATPPLQALPSPPASFPGQAPFSPSASLP-MSPLATPPPQAP 832
Score = 28.5 bits (62), Expect = 5.5
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 25/70 (35%)
Query: 176 SPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYY--PPF 233
SPP PP A P SPP ASP S S+ PP +PP PP
Sbjct: 666 SPPPSPPVQA---------PFSPP---------ASPPVS---PSATPPSQAPPSLAAPPL 704
Query: 234 EKP--PPYSP 241
+ P PP SP
Sbjct: 705 QVPPSPPASP 714
Score = 28.1 bits (61), Expect = 7.1
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Query: 195 PSSPPSGLSDEPQSASPSPSYMWSSSAPPR--YSPPYYPPFEKPPPYSP 241
P+SPP S P +P P PP SPP P PP P
Sbjct: 711 PASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPP 759
>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
Length = 378
Score = 36.6 bits (83), Expect = 0.020
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 176 SPPHLPPYSAYDFQHS-GVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFE 234
+PP PP+++Y G FP PP G PQ P + + PP + PP
Sbjct: 255 APPPPPPFTSYIVSTPPGGFP--PPQGF---PQGYGAPPQFSFGYGPPPPPPDQFAPPGV 309
Query: 235 KPPPYSP 241
PPP +P
Sbjct: 310 PPPPATP 316
>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
Length = 407
Score = 36.6 bits (83), Expect = 0.020
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 176 SPPHLPPYSAYDFQHS-GVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFE 234
+PP PP+++Y G FP PP G PQ P + + PP + PP
Sbjct: 255 APPPPPPFTSYIVSTPPGGFP--PPQGF---PQGYGAPPQFSFGYGPPPPPPDQFAPPGV 309
Query: 235 KPPPYSP 241
PPP +P
Sbjct: 310 PPPPATP 316
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 36.6 bits (83), Expect = 0.020
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 177 PPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKP 236
PP PP+S H + PP L P +A P P PP SP PP P
Sbjct: 310 PPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPASP--LPPPPPP 367
Query: 237 PPYSP 241
PP +P
Sbjct: 368 PPPTP 372
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 36.2 bits (82), Expect = 0.026
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 178 PHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPP 237
P LP ++ + Q P PP +PQ P PP++ PP+ PP + PP
Sbjct: 568 PFLPTHTQPNLQG----PLHPPLPPPHQPQPQQPQ------QQPPPQHQPPHQPPHQPPP 617
Query: 238 PYSP 241
+ P
Sbjct: 618 QHQP 621
>gi|94421475 paternally expressed 10 isoform RF1/2 [Homo sapiens]
Length = 708
Score = 36.2 bits (82), Expect = 0.026
Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 149 NCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSP------PSGL 202
N +++N +P +S A TY P +P Y Y +P+ P P G
Sbjct: 602 NFTIQNQYPRLSIPNLEDQAHLATYTEFVPQIPGYQTYPTY--AAYPTYPVGFAWYPVGR 659
Query: 203 SDEPQSASPSPSYMWS-----SSAPPRYSPPYYPPFEKPPPYSP 241
+ +S W+ P+Y PP PP PPP P
Sbjct: 660 DGQGRSLYVPVMITWNPHWYRQPPVPQYPPPQPPPPPPPPPPPP 703
>gi|166706915 GLIS family zinc finger 1 [Homo sapiens]
Length = 620
Score = 36.2 bits (82), Expect = 0.026
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 164 HPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPS--SPPSGLSDEPQSASPSPSYMWSSSA 221
HP A+ ++++H P S D G+ SP GL P S
Sbjct: 429 HPLDATTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGLGPPPLPPSSQSHSPGGQPF 488
Query: 222 PPRYSPPYYPPFEKPPP 238
P S P YPPF+ PPP
Sbjct: 489 PTLPSKPSYPPFQSPPP 505
>gi|15029506 homeobox D8 [Homo sapiens]
Length = 290
Score = 35.8 bits (81), Expect = 0.034
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 21/72 (29%)
Query: 178 PHLPPYSAYDFQHSGVFPSSPPSGLSD-----------EPQSASPSPSYMWSSSAPPRYS 226
PH PP + H+ PS PPSG P SP+ +Y +APP
Sbjct: 62 PHAPPQA-----HAHPHPSPPPSGTGCGGREGRGQEYFHPGGGSPAAAYQ---AAPP--P 111
Query: 227 PPYYPPFEKPPP 238
PP+ PP PPP
Sbjct: 112 PPHPPPPPPPPP 123
>gi|169163027 PREDICTED: similar to Putative acrosin-like protease
[Homo sapiens]
Length = 355
Score = 35.8 bits (81), Expect = 0.034
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 177 PPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKP 236
PP PP+S H + PP L P +A P P PP SP PP P
Sbjct: 244 PPIRPPFSHPLSAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPPSP--LPPPPPP 301
Query: 237 PPYSP 241
PP +P
Sbjct: 302 PPPTP 306
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,938,324
Number of Sequences: 37866
Number of extensions: 589039
Number of successful extensions: 5323
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 276
Number of HSP's that attempted gapping in prelim test: 3994
Number of HSP's gapped (non-prelim): 1238
length of query: 241
length of database: 18,247,518
effective HSP length: 99
effective length of query: 142
effective length of database: 14,498,784
effective search space: 2058827328
effective search space used: 2058827328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.