Search of human proteins with 156416005

Search of human proteins with 156416005

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156416005 COMM domain containing 9 isoform 1 [Homo sapiens]
         (198 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156416005 COMM domain containing 9 isoform 1 [Homo sapiens]        377   e-105
gi|156416007 COMM domain containing 9 isoform 2 [Homo sapiens]        280   7e-76
gi|45545435 COMM domain containing 2 [Homo sapiens]                    39   0.004
gi|8923458 COMM domain containing 8 [Homo sapiens]                     38   0.005
gi|6912278 COMM domain containing 3 [Homo sapiens]                     38   0.006
gi|124487382 COMM domain containing 5 [Homo sapiens]                   37   0.011
gi|154800418 COMM domain containing 5 [Homo sapiens]                   37   0.011
gi|19923430 COMM domain containing 5 [Homo sapiens]                    37   0.011
gi|169166962 PREDICTED: similar to COMM domain containing 5 [Hom...    35   0.042
gi|169166771 PREDICTED: similar to COMM domain containing 5 [Hom...    35   0.042
gi|169166418 PREDICTED: similar to COMM domain containing 5 [Hom...    35   0.042
gi|7706663 COMM domain containing 10 [Homo sapiens]                    33   0.12 
gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-l...    30   1.3  
gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-l...    30   1.3  
gi|155030202 RAP1, GTP-GDP dissociation stimulator 1 isoform 6 [...    30   1.3  
gi|155030200 RAP1, GTP-GDP dissociation stimulator 1 isoform 5 [...    30   1.3  
gi|155030198 RAP1, GTP-GDP dissociation stimulator 1 isoform 4 [...    30   1.3  
gi|155030196 RAP1, GTP-GDP dissociation stimulator 1 isoform 3 [...    30   1.3  
gi|155030194 RAP1, GTP-GDP dissociation stimulator 1 isoform 2 [...    30   1.3  
gi|155030192 RAP1, GTP-GDP dissociation stimulator 1 isoform 1 [...    30   1.3  
gi|194306650 SET domain and mariner transposase fusion [Homo sap...    30   1.3  
gi|151101369 COMM domain containing 7 isoform 1 [Homo sapiens]         30   1.3  
gi|4505541 USO1 homolog, vesicle docking protein [Homo sapiens]        29   3.0  
gi|27436978 potassium voltage-gated channel, Isk-related family,...    29   3.0  
gi|14211935 testes development-related NYD-SP18 [Homo sapiens]         29   3.0  
gi|94536786 hypothetical protein LOC79091 [Homo sapiens]               29   3.0  
gi|46276887 WD repeat domain 78 isoform 1 [Homo sapiens]               28   3.9  
gi|46276885 WD repeat domain 78 isoform 2 [Homo sapiens]               28   3.9  
gi|6678676 component of oligomeric golgi complex 2 isoform 1 [Ho...    28   5.1  
gi|22749079 MURR1 [Homo sapiens]                                       28   5.1  

>gi|156416005 COMM domain containing 9 isoform 1 [Homo sapiens]
          Length = 198

 Score =  377 bits (968), Expect = e-105
 Identities = 198/198 (100%), Positives = 198/198 (100%)

Query: 1   MAALTAEHFAALQSLLKASSKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEEL 60
           MAALTAEHFAALQSLLKASSKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEEL
Sbjct: 1   MAALTAEHFAALQSLLKASSKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEEL 60

Query: 61  LQALHRLTRLVAFRDLSSAEAILALFPENFHQNLKNLLTKIILEHVSTWRTEAQANQISL 120
           LQALHRLTRLVAFRDLSSAEAILALFPENFHQNLKNLLTKIILEHVSTWRTEAQANQISL
Sbjct: 61  LQALHRLTRLVAFRDLSSAEAILALFPENFHQNLKNLLTKIILEHVSTWRTEAQANQISL 120

Query: 121 PRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQEDPSLCGDKPSISAVTVELSKETLDT 180
           PRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQEDPSLCGDKPSISAVTVELSKETLDT
Sbjct: 121 PRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQEDPSLCGDKPSISAVTVELSKETLDT 180

Query: 181 MLDGLGRIRDQLSAVASK 198
           MLDGLGRIRDQLSAVASK
Sbjct: 181 MLDGLGRIRDQLSAVASK 198


>gi|156416007 COMM domain containing 9 isoform 2 [Homo sapiens]
          Length = 156

 Score =  280 bits (715), Expect = 7e-76
 Identities = 156/198 (78%), Positives = 156/198 (78%), Gaps = 42/198 (21%)

Query: 1   MAALTAEHFAALQSLLKASSKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEEL 60
           MAALTAEHFAALQSLLK                                          L
Sbjct: 1   MAALTAEHFAALQSLLK------------------------------------------L 18

Query: 61  LQALHRLTRLVAFRDLSSAEAILALFPENFHQNLKNLLTKIILEHVSTWRTEAQANQISL 120
           LQALHRLTRLVAFRDLSSAEAILALFPENFHQNLKNLLTKIILEHVSTWRTEAQANQISL
Sbjct: 19  LQALHRLTRLVAFRDLSSAEAILALFPENFHQNLKNLLTKIILEHVSTWRTEAQANQISL 78

Query: 121 PRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQEDPSLCGDKPSISAVTVELSKETLDT 180
           PRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQEDPSLCGDKPSISAVTVELSKETLDT
Sbjct: 79  PRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQEDPSLCGDKPSISAVTVELSKETLDT 138

Query: 181 MLDGLGRIRDQLSAVASK 198
           MLDGLGRIRDQLSAVASK
Sbjct: 139 MLDGLGRIRDQLSAVASK 156


>gi|45545435 COMM domain containing 2 [Homo sapiens]
          Length = 199

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 24/116 (20%), Positives = 56/116 (48%)

Query: 41  KLLDVTCSSLSVTQEEAEELLQALHRLTRLVAFRDLSSAEAILALFPENFHQNLKNLLTK 100
           K+ +     L+V+ +  +  ++ L  L    +   +S  +   ++F   F + L  LL +
Sbjct: 42  KIYEGAARKLNVSSDTVQHGVEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQ 101

Query: 101 IILEHVSTWRTEAQANQISLPRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQED 156
           + L++    RT       SLP   +L+WR+D++ +S S+ +   P   +++ + ++
Sbjct: 102 LYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLNQN 157


>gi|8923458 COMM domain containing 8 [Homo sapiens]
          Length = 183

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 7/68 (10%)

Query: 118 ISLPRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQEDPSLCGDKPSISAVTVELSKET 177
           IS  +L D DW+V +  SSD I+ + +P   L + ++E+         +   ++E+S+E 
Sbjct: 112 ISSAQLQDFDWQVKLALSSDKIAALRMPLLSLHLDVKEN-------GEVKPYSIEMSREE 164

Query: 178 LDTMLDGL 185
           L  ++  L
Sbjct: 165 LQNLIQSL 172


>gi|6912278 COMM domain containing 3 [Homo sapiens]
          Length = 195

 Score = 37.7 bits (86), Expect = 0.006
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 119 SLPRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQEDPSLCGDKPSISAVTVELSKETL 178
           SLP + D+ WR++ +  ++ + RM  P  L+ + +Q       D PS   ++   S E L
Sbjct: 121 SLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNT-----DSPSYPEISFSCSMEQL 175

Query: 179 DTMLDGLGRIRD 190
               D +G+++D
Sbjct: 176 Q---DLVGKLKD 184


>gi|124487382 COMM domain containing 5 [Homo sapiens]
          Length = 224

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 15/43 (34%), Positives = 26/43 (60%)

Query: 113 AQANQISLPRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQE 155
           AQ     LP + D  WRVD+  S+ +++R   P+ L+Q+K+ +
Sbjct: 142 AQQQGAWLPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSD 184


>gi|154800418 COMM domain containing 5 [Homo sapiens]
          Length = 224

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 15/43 (34%), Positives = 26/43 (60%)

Query: 113 AQANQISLPRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQE 155
           AQ     LP + D  WRVD+  S+ +++R   P+ L+Q+K+ +
Sbjct: 142 AQQQGAWLPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSD 184


>gi|19923430 COMM domain containing 5 [Homo sapiens]
          Length = 224

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 15/43 (34%), Positives = 26/43 (60%)

Query: 113 AQANQISLPRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQE 155
           AQ     LP + D  WRVD+  S+ +++R   P+ L+Q+K+ +
Sbjct: 142 AQQQGAWLPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSD 184


>gi|169166962 PREDICTED: similar to COMM domain containing 5 [Homo
           sapiens]
          Length = 273

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 17/157 (10%)

Query: 10  AALQSLLKASSKDVVRQLCQESFSS-SALGLKKLLDVTCSSLSVTQEEAEELLQALHRLT 68
           AA+  LL   ++ + R+L +   SS      ++ +     S ++ QE    LL  +H L 
Sbjct: 83  AAMDQLLGDLNRSMFRKLLKFVVSSLQGEDCREAVQCLGVSTNLPQEWLGALLAGMHTLL 142

Query: 69  RLVAFRDLSSAEAILALFPENFHQNLKNL---------LTKIIL-EHVSTWRTEAQANQI 118
           +       +S      L P  F   L+ L         L  ++         + AQ    
Sbjct: 143 QQALHLPPTS------LKPNTFRDQLQELCIPQDLVGDLASVVFGSQRPLLDSVAQQQGA 196

Query: 119 SLPRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQE 155
            LP + D  W VD+  S+ +++R   P  L+Q+K+ +
Sbjct: 197 WLPHVADFQWWVDVTISTSALARFLQPRVLMQLKLSD 233


>gi|169166771 PREDICTED: similar to COMM domain containing 5 [Homo
           sapiens]
          Length = 273

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 17/157 (10%)

Query: 10  AALQSLLKASSKDVVRQLCQESFSS-SALGLKKLLDVTCSSLSVTQEEAEELLQALHRLT 68
           AA+  LL   ++ + R+L +   SS      ++ +     S ++ QE    LL  +H L 
Sbjct: 83  AAMDQLLGDLNRSMFRKLLKFVVSSLQGEDCREAVQCLGVSTNLPQEWLGALLAGMHTLL 142

Query: 69  RLVAFRDLSSAEAILALFPENFHQNLKNL---------LTKIIL-EHVSTWRTEAQANQI 118
           +       +S      L P  F   L+ L         L  ++         + AQ    
Sbjct: 143 QQALHLPPTS------LKPNTFRDQLQELCIPQDLVGDLASVVFGSQRPLLDSVAQQQGA 196

Query: 119 SLPRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQE 155
            LP + D  W VD+  S+ +++R   P  L+Q+K+ +
Sbjct: 197 WLPHVADFQWWVDVTISTSALARFLQPRVLMQLKLSD 233


>gi|169166418 PREDICTED: similar to COMM domain containing 5 [Homo
           sapiens]
          Length = 273

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 17/157 (10%)

Query: 10  AALQSLLKASSKDVVRQLCQESFSS-SALGLKKLLDVTCSSLSVTQEEAEELLQALHRLT 68
           AA+  LL   ++ + R+L +   SS      ++ +     S ++ QE    LL  +H L 
Sbjct: 83  AAMDQLLGDLNRSMFRKLLKFVVSSLQGEDCREAVQCLGVSTNLPQEWLGALLAGMHTLL 142

Query: 69  RLVAFRDLSSAEAILALFPENFHQNLKNL---------LTKIIL-EHVSTWRTEAQANQI 118
           +       +S      L P  F   L+ L         L  ++         + AQ    
Sbjct: 143 QQALHLPPTS------LKPNTFRDQLQELCIPQDLVGDLASVVFGSQRPLLDSVAQQQGA 196

Query: 119 SLPRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQE 155
            LP + D  W VD+  S+ +++R   P  L+Q+K+ +
Sbjct: 197 WLPHVADFQWWVDVTISTSALARFLQPRVLMQLKLSD 233


>gi|7706663 COMM domain containing 10 [Homo sapiens]
          Length = 202

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 28/160 (17%)

Query: 55  EEAEELLQALHRLTRLVAFRDLSSA-EAILALFPENFHQNLKNLLTKIILEH-------- 105
           EE EE LQA   L +    +DL    E I  +  +  + N+K    +  LE+        
Sbjct: 51  EEEEEKLQAAFSLEK----QDLHLVLETISFILEQAVYHNVKPAALQQQLENIHLRQDKA 106

Query: 106 ---VSTWRTEAQAN------QISLP-RLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQE 155
              V+TW +  Q        +I  P +L  + W+++++ +  + +++  P  +LQ+ +  
Sbjct: 107 EAFVNTWSSMGQETVEKFRQRILAPCKLETVGWQLNLQMAHSAQAKLKSPQAVLQLGVNN 166

Query: 156 DPSLCGDKPSISAVTVELSKETLDTMLDGLGRIRDQLSAV 195
           +     D  S+  V VE S + L    + L  I+ QL ++
Sbjct: 167 E-----DSKSLEKVLVEFSHKELFDFYNKLETIQAQLDSL 201


>gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 2 [Homo sapiens]
          Length = 602

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 9/128 (7%)

Query: 16  LKASSKDVVRQLCQESFSSSALG-LKKLLDVTCSSLSVTQEEAEELLQALHRLTRLVAFR 74
           LK   K V  QL +E  +++     K++L+V   +L++ +EE    L  + R  R   F 
Sbjct: 102 LKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQLQTLNIQKEELNTDLYHMKRSLRY--FE 159

Query: 75  DLSSAEAILALFPENFHQNLKNLLTKIILEHVSTWRTEAQANQISLPRLVDLDWRVDIKT 134
           + S   A+           L+++L+ ++         + +ANQ+S P     +W+++   
Sbjct: 160 EKSKDLAVRLQHSLQRKGELESVLSDVMATQ------KKKANQLSSPSKAGTEWKLEQSM 213

Query: 135 SSDSISRM 142
             +++ ++
Sbjct: 214 REEALLKV 221


>gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 632

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 9/128 (7%)

Query: 16  LKASSKDVVRQLCQESFSSSALG-LKKLLDVTCSSLSVTQEEAEELLQALHRLTRLVAFR 74
           LK   K V  QL +E  +++     K++L+V   +L++ +EE    L  + R  R   F 
Sbjct: 103 LKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQLQTLNIQKEELNTDLYHMKRSLRY--FE 160

Query: 75  DLSSAEAILALFPENFHQNLKNLLTKIILEHVSTWRTEAQANQISLPRLVDLDWRVDIKT 134
           + S   A+           L+++L+ ++         + +ANQ+S P     +W+++   
Sbjct: 161 EKSKDLAVRLQHSLQRKGELESVLSDVMATQ------KKKANQLSSPSKAGTEWKLEQSM 214

Query: 135 SSDSISRM 142
             +++ ++
Sbjct: 215 REEALLKV 222


>gi|155030202 RAP1, GTP-GDP dissociation stimulator 1 isoform 6
           [Homo sapiens]
          Length = 516

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 2   AALTAEHFAALQSLLKAS-SKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEEL 60
           A +  E    L +L++ S SKDV++ + Q        G+K L+ +  S   + Q EA   
Sbjct: 369 AGVMGESNRLLSALIRHSKSKDVIKTIVQSG------GIKHLVTMATSEHVIMQNEALVA 422

Query: 61  LQALHRLTRLVAFRDLSSAEAILAL 85
           L  +  L    A +DL SA+ +  L
Sbjct: 423 LALIAALELGTAEKDLESAKLVQIL 447


>gi|155030200 RAP1, GTP-GDP dissociation stimulator 1 isoform 5
           [Homo sapiens]
          Length = 558

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 2   AALTAEHFAALQSLLKAS-SKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEEL 60
           A +  E    L +L++ S SKDV++ + Q        G+K L+ +  S   + Q EA   
Sbjct: 411 AGVMGESNRLLSALIRHSKSKDVIKTIVQSG------GIKHLVTMATSEHVIMQNEALVA 464

Query: 61  LQALHRLTRLVAFRDLSSAEAILAL 85
           L  +  L    A +DL SA+ +  L
Sbjct: 465 LALIAALELGTAEKDLESAKLVQIL 489


>gi|155030198 RAP1, GTP-GDP dissociation stimulator 1 isoform 4
           [Homo sapiens]
          Length = 559

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 2   AALTAEHFAALQSLLKAS-SKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEEL 60
           A +  E    L +L++ S SKDV++ + Q        G+K L+ +  S   + Q EA   
Sbjct: 412 AGVMGESNRLLSALIRHSKSKDVIKTIVQSG------GIKHLVTMATSEHVIMQNEALVA 465

Query: 61  LQALHRLTRLVAFRDLSSAEAILAL 85
           L  +  L    A +DL SA+ +  L
Sbjct: 466 LALIAALELGTAEKDLESAKLVQIL 490


>gi|155030196 RAP1, GTP-GDP dissociation stimulator 1 isoform 3
           [Homo sapiens]
          Length = 607

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 2   AALTAEHFAALQSLLKAS-SKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEEL 60
           A +  E    L +L++ S SKDV++ + Q        G+K L+ +  S   + Q EA   
Sbjct: 460 AGVMGESNRLLSALIRHSKSKDVIKTIVQSG------GIKHLVTMATSEHVIMQNEALVA 513

Query: 61  LQALHRLTRLVAFRDLSSAEAILAL 85
           L  +  L    A +DL SA+ +  L
Sbjct: 514 LALIAALELGTAEKDLESAKLVQIL 538


>gi|155030194 RAP1, GTP-GDP dissociation stimulator 1 isoform 2
           [Homo sapiens]
          Length = 607

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 2   AALTAEHFAALQSLLKAS-SKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEEL 60
           A +  E    L +L++ S SKDV++ + Q        G+K L+ +  S   + Q EA   
Sbjct: 460 AGVMGESNRLLSALIRHSKSKDVIKTIVQSG------GIKHLVTMATSEHVIMQNEALVA 513

Query: 61  LQALHRLTRLVAFRDLSSAEAILAL 85
           L  +  L    A +DL SA+ +  L
Sbjct: 514 LALIAALELGTAEKDLESAKLVQIL 538


>gi|155030192 RAP1, GTP-GDP dissociation stimulator 1 isoform 1
           [Homo sapiens]
          Length = 608

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 2   AALTAEHFAALQSLLKAS-SKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEEL 60
           A +  E    L +L++ S SKDV++ + Q        G+K L+ +  S   + Q EA   
Sbjct: 461 AGVMGESNRLLSALIRHSKSKDVIKTIVQSG------GIKHLVTMATSEHVIMQNEALVA 514

Query: 61  LQALHRLTRLVAFRDLSSAEAILAL 85
           L  +  L    A +DL SA+ +  L
Sbjct: 515 LALIAALELGTAEKDLESAKLVQIL 539


>gi|194306650 SET domain and mariner transposase fusion [Homo
           sapiens]
          Length = 684

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 154 QEDPSLCGDKPSISAVTVELSKETLDTMLD 183
           +++PS+CG  PS+      L+ ET+  MLD
Sbjct: 318 EKEPSMCGSAPSVFPSCKRLTLETMKMMLD 347


>gi|151101369 COMM domain containing 7 isoform 1 [Homo sapiens]
          Length = 200

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 22/155 (14%)

Query: 4   LTAEHFAALQSLL---KASSKDVVRQLCQ--ESFSSSALGLKKLLDVTCSSLSVTQEEAE 58
           L A+ F+AL  +L       K+V R L Q  E  +++ + L  L  +  S L V     +
Sbjct: 25  LGAQQFSALTEVLFHFLTEPKEVERFLAQLSEFATTNQISLGSLRSIVKSLLLVPNGALK 84

Query: 59  ELLQALHRLTRLVAFRDLSSAEAILALFPENFHQNLKNLLTKIILEHVSTWRTEAQANQI 118
           + L A       +    L  +E     F E + QN   L         + W   A    +
Sbjct: 85  KSLTAKQVQADFIT---LGLSEEKATYFSEKWKQNAPTL---------ARW---AIGQTL 129

Query: 119 SLPRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKI 153
            + +L+D++W+  + + S  + +  V +  LQ+K+
Sbjct: 130 MINQLIDMEWKFGVTSGSSELEK--VGSIFLQLKL 162


>gi|4505541 USO1 homolog, vesicle docking protein [Homo sapiens]
          Length = 962

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 9/68 (13%)

Query: 12  LQSLLKASSKDVVRQLCQESFSSSALGLKKLLDVTCSSLSVTQEEAEELLQALHR----L 67
           L SLLK     V     Q+    S +G+ +L+D+   S  V + +   LLQAL R    +
Sbjct: 146 LTSLLKQLGPQV-----QQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAI 200

Query: 68  TRLVAFRD 75
            ++VAF +
Sbjct: 201 QKIVAFEN 208


>gi|27436978 potassium voltage-gated channel, Isk-related family,
           member 2 [Homo sapiens]
          Length = 123

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 89  NFHQNLKNLLTKIILEHVSTWRTEAQANQISLPRLVDLD 127
           NF Q L+++  +I + ++  WR    A Q +L   VD +
Sbjct: 6   NFTQTLEDVFRRIFITYMDNWRQNTTAEQEALQAKVDAE 44


>gi|14211935 testes development-related NYD-SP18 [Homo sapiens]
          Length = 344

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 21/88 (23%), Positives = 37/88 (42%)

Query: 42  LLDVTCSSLSVTQEEAEELLQALHRLTRLVAFRDLSSAEAILALFPENFHQNLKNLLTKI 101
           L+   CSS S   +  ++ LQA      L+       +EA+  +F +   QN  +  +  
Sbjct: 216 LVPKNCSSPSGDSKLVQKKLQASQPSESLIQLMTKGESEALSQIFADLHQQNQLSFRSSR 275

Query: 102 ILEHVSTWRTEAQANQISLPRLVDLDWR 129
            +E       +  + + S+P   DL WR
Sbjct: 276 KVETNKNSSGKDSSREDSIPCTCDLRWR 303


>gi|94536786 hypothetical protein LOC79091 [Homo sapiens]
          Length = 404

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 34  SSALGLKKLLDVTCSSLSVTQEEAEELLQALHRLTRLVAFRDLSSAEAILALFPENF-HQ 92
           ++ L ++K L+ T   L VT E  +     LH L +L   +     E + A FP+   ++
Sbjct: 329 TAILSVEKRLNFTLRHLDVTCEAYDHFRSCLHALEQLADGKLRFVVEPVEASFPQLLVYE 388

Query: 93  NLKNL-LTKIILEHVS 107
            L+ L L KII E V+
Sbjct: 389 RLQQLELWKIIAEPVT 404


>gi|46276887 WD repeat domain 78 isoform 1 [Homo sapiens]
          Length = 848

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 5/71 (7%)

Query: 32  FSSSALGLKKLLDVTCSSLSVTQEEAEELLQALHRLTRLVAFRDLSSAEAI--LALFPEN 89
           F+ S LG      V+ SS+S ++  AE+L +  ++  RL +F DL    A     +  E+
Sbjct: 175 FTRSVLGSST---VSKSSVSASESIAEDLEEPSYKRERLTSFTDLQVIRAAPEKIVTKED 231

Query: 90  FHQNLKNLLTK 100
             +N++ +LT+
Sbjct: 232 LEKNIEIILTE 242


>gi|46276885 WD repeat domain 78 isoform 2 [Homo sapiens]
          Length = 545

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 5/71 (7%)

Query: 32  FSSSALGLKKLLDVTCSSLSVTQEEAEELLQALHRLTRLVAFRDLSSAEAI--LALFPEN 89
           F+ S LG      V+ SS+S ++  AE+L +  ++  RL +F DL    A     +  E+
Sbjct: 175 FTRSVLGSST---VSKSSVSASESIAEDLEEPSYKRERLTSFTDLQVIRAAPEKIVTKED 231

Query: 90  FHQNLKNLLTK 100
             +N++ +LT+
Sbjct: 232 LEKNIEIILTE 242


>gi|6678676 component of oligomeric golgi complex 2 isoform 1 [Homo
           sapiens]
          Length = 738

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 16/55 (29%), Positives = 28/55 (50%)

Query: 48  SSLSVTQEEAEELLQALHRLTRLVAFRDLSSAEAILALFPENFHQNLKNLLTKII 102
           + L   QE+  ELL+ +     ++ F++ SS  A L     +F   + +L +KII
Sbjct: 518 ADLDKLQEQLPELLEIIKPKLEMIGFKNFSSISAALEDSQSSFSACVPSLSSKII 572


>gi|22749079 MURR1 [Homo sapiens]
          Length = 190

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 14/77 (18%)

Query: 126 LDWRVDIKTSSDSISRMAVPTCLLQMKI----QEDPSLCGDKPSISAVTVELSKETLDTM 181
           L WRVD K+ S   +++  P  ++++++    QE   LC          +E  +  ++ +
Sbjct: 122 LSWRVDGKSQSRHSAQIHTPVAIIELELGKYGQESEFLC----------LEFDEVKVNQI 171

Query: 182 LDGLGRIRDQLSAVASK 198
           L  L  + + +S + S+
Sbjct: 172 LKTLSEVEESISTLISQ 188


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.128    0.347 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,925,087
Number of Sequences: 37866
Number of extensions: 210228
Number of successful extensions: 664
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 642
Number of HSP's gapped (non-prelim): 41
length of query: 198
length of database: 18,247,518
effective HSP length: 97
effective length of query: 101
effective length of database: 14,574,516
effective search space: 1472026116
effective search space used: 1472026116
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.