Guide to the Human Genome
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Name: COMMD7 Sequence: fasta or formatted (200aa) NCBI GI: 151101369
Description:

COMM domain containing 7 isoform 1

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt prot [199aa] COMM domain containing 7 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         12           1
 C cysteine            1.5          3           1
 D aspartate           2.0          4           1
 E glutamate           9.0         18           2
 F phenylalanine       6.0         12           1
 G glycine             6.0         12           2
 H histidine           1.5          3           1
 I isoleucine          4.0          8           1
 K lysine              6.5         13           2
 L leucine            13.5         27           3
 M methionine          3.0          6           1
 N asparagine          3.5          7           1
 P proline             3.0          6           1
 Q glutamine           7.5         15           2
 R arginine            3.0          6           1
 S serine              7.5         15           2
 T threonine           7.0         14           2
 V valine              6.5         13           2
 W tryptophan          1.5          3           1
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   COMM domain containing 7 isoform 1 
COMMD7                0.981   COMM domain containing 7 isoform 2 
COMMD4                0.065   COMM domain containing 4 
COMMD6                0.038   COMM domain containing 6 isoform b 
COMMD6                0.022   COMM domain containing 6 isoform a 
LOC100129218          0.016   PREDICTED: hypothetical protein 
LOC100129218          0.016   PREDICTED: hypothetical protein 
LOC100129218          0.016   PREDICTED: hypothetical protein 
COMMD9                0.013   COMM domain containing 9 isoform 1 
LOC646670             0.008   PREDICTED: similar to COMM domain containing 4 [Hom...
OTOA                  0.008   otoancorin isoform 3 
OTOA                  0.008   otoancorin isoform 2 
OTOA                  0.008   otoancorin isoform 1 
TRABD                 0.008   TraB domain containing 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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