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Search of human proteins with 155722983
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|155722983 TNF receptor-associated protein 1 [Homo sapiens]
(704 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|155722983 TNF receptor-associated protein 1 [Homo sapiens] 1378 0.0
gi|4507677 heat shock protein 90kDa beta, member 1 [Homo sapiens] 325 1e-88
gi|154146191 heat shock 90kDa protein 1, alpha isoform 2 [Homo s... 196 5e-50
gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo s... 196 5e-50
gi|20149594 heat shock 90kDa protein 1, beta [Homo sapiens] 196 6e-50
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 37 0.063
gi|74048554 cancer susceptibility candidate 5 isoform 2 [Homo sa... 33 1.2
gi|74048514 cancer susceptibility candidate 5 isoform 1 [Homo sa... 33 1.2
gi|33188445 microfilament and actin filament cross-linker protei... 32 2.0
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 32 2.6
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 32 2.6
gi|212286181 parvin, gamma [Homo sapiens] 31 3.4
gi|212286179 parvin, gamma [Homo sapiens] 31 3.4
gi|11545879 parvin, gamma [Homo sapiens] 31 3.4
gi|190684699 nudix (nucleoside diphosphate linked moiety X)-type... 31 3.4
gi|4502395 beclin 1 [Homo sapiens] 31 4.5
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 30 5.9
gi|42741679 ATPase, H+ transporting, lysosomal V0 subunit A2 [Ho... 30 5.9
gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens] 30 5.9
gi|239752942 PREDICTED: hypothetical protein [Homo sapiens] 30 7.7
gi|239747476 PREDICTED: hypothetical protein XP_002347543 [Homo ... 30 7.7
gi|239741348 PREDICTED: hypothetical protein XP_002342180 [Homo ... 30 7.7
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 30 7.7
gi|51230412 GTPase activating Rap/RanGAP domain-like 1 isoform 2... 30 7.7
gi|51226124 GTPase activating Rap/RanGAP domain-like 1 isoform 1... 30 7.7
gi|221139761 zinc finger protein 853 [Homo sapiens] 30 10.0
gi|242247001 clathrin, heavy polypeptide-like 1 isoform 2 [Homo ... 30 10.0
gi|242246985 clathrin, heavy polypeptide-like 1 isoform 1 [Homo ... 30 10.0
gi|21735548 centrosomal protein 2 [Homo sapiens] 30 10.0
gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2... 30 10.0
>gi|155722983 TNF receptor-associated protein 1 [Homo sapiens]
Length = 704
Score = 1378 bits (3566), Expect = 0.0
Identities = 704/704 (100%), Positives = 704/704 (100%)
Query: 1 MARELRALLLWGRRLRPLLRAPALAAVPGGKPILCPRRTTAQLGPRRNPAWSLQAGRLFS 60
MARELRALLLWGRRLRPLLRAPALAAVPGGKPILCPRRTTAQLGPRRNPAWSLQAGRLFS
Sbjct: 1 MARELRALLLWGRRLRPLLRAPALAAVPGGKPILCPRRTTAQLGPRRNPAWSLQAGRLFS 60
Query: 61 TQTAEDKEEPLHSIISSTESVQGSTSKHEFQAETKKLLDIVARSLYSEKEVFIRELISNA 120
TQTAEDKEEPLHSIISSTESVQGSTSKHEFQAETKKLLDIVARSLYSEKEVFIRELISNA
Sbjct: 61 TQTAEDKEEPLHSIISSTESVQGSTSKHEFQAETKKLLDIVARSLYSEKEVFIRELISNA 120
Query: 121 SDALEKLRHKLVSDGQALPEMEIHLQTNAEKGTITIQDTGIGMTQEELVSNLGTIARSGS 180
SDALEKLRHKLVSDGQALPEMEIHLQTNAEKGTITIQDTGIGMTQEELVSNLGTIARSGS
Sbjct: 121 SDALEKLRHKLVSDGQALPEMEIHLQTNAEKGTITIQDTGIGMTQEELVSNLGTIARSGS 180
Query: 181 KAFLDALQNQAEASSKIIGQFGVGFYSAFMVADRVEVYSRSAAPGSLGYQWLSDGSGVFE 240
KAFLDALQNQAEASSKIIGQFGVGFYSAFMVADRVEVYSRSAAPGSLGYQWLSDGSGVFE
Sbjct: 181 KAFLDALQNQAEASSKIIGQFGVGFYSAFMVADRVEVYSRSAAPGSLGYQWLSDGSGVFE 240
Query: 241 IAEASGVRTGTKIIIHLKSDCKEFSSEARVRDVVTKYSNFVSFPLYLNGRRMNTLQAIWM 300
IAEASGVRTGTKIIIHLKSDCKEFSSEARVRDVVTKYSNFVSFPLYLNGRRMNTLQAIWM
Sbjct: 241 IAEASGVRTGTKIIIHLKSDCKEFSSEARVRDVVTKYSNFVSFPLYLNGRRMNTLQAIWM 300
Query: 301 MDPKDVREWQHEEFYRYVAQAHDKPRYTLHYKTDAPLNIRSIFYVPDMKPSMFDVSRELG 360
MDPKDVREWQHEEFYRYVAQAHDKPRYTLHYKTDAPLNIRSIFYVPDMKPSMFDVSRELG
Sbjct: 301 MDPKDVREWQHEEFYRYVAQAHDKPRYTLHYKTDAPLNIRSIFYVPDMKPSMFDVSRELG 360
Query: 361 SSVALYSRKVLIQTKATDILPKWLRFIRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQ 420
SSVALYSRKVLIQTKATDILPKWLRFIRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQ
Sbjct: 361 SSVALYSRKVLIQTKATDILPKWLRFIRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQ 420
Query: 421 RLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTATEQEVKEDIAKLLRYESSALPSGQL 480
RLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTATEQEVKEDIAKLLRYESSALPSGQL
Sbjct: 421 RLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTATEQEVKEDIAKLLRYESSALPSGQL 480
Query: 481 TSLSEYASRMRAGTRNIYYLCAPNRHLAEHSPYYEAMKKKDTEVLFCFEQFDELTLLHLR 540
TSLSEYASRMRAGTRNIYYLCAPNRHLAEHSPYYEAMKKKDTEVLFCFEQFDELTLLHLR
Sbjct: 481 TSLSEYASRMRAGTRNIYYLCAPNRHLAEHSPYYEAMKKKDTEVLFCFEQFDELTLLHLR 540
Query: 541 EFDKKKLISVETDIVVDHYKEEKFEDRSPAAECLSEKETEELMAWMRNVLGSRVTNVKVT 600
EFDKKKLISVETDIVVDHYKEEKFEDRSPAAECLSEKETEELMAWMRNVLGSRVTNVKVT
Sbjct: 541 EFDKKKLISVETDIVVDHYKEEKFEDRSPAAECLSEKETEELMAWMRNVLGSRVTNVKVT 600
Query: 601 LRLDTHPAMVTVLEMGAARHFLRMQQLAKTQEERAQLLQPTLEINPRHALIKKLNQLRAS 660
LRLDTHPAMVTVLEMGAARHFLRMQQLAKTQEERAQLLQPTLEINPRHALIKKLNQLRAS
Sbjct: 601 LRLDTHPAMVTVLEMGAARHFLRMQQLAKTQEERAQLLQPTLEINPRHALIKKLNQLRAS 660
Query: 661 EPGLAQLLVDQIYENAMIAAGLVDDPRAMVGRLNELLVKALERH 704
EPGLAQLLVDQIYENAMIAAGLVDDPRAMVGRLNELLVKALERH
Sbjct: 661 EPGLAQLLVDQIYENAMIAAGLVDDPRAMVGRLNELLVKALERH 704
>gi|4507677 heat shock protein 90kDa beta, member 1 [Homo sapiens]
Length = 803
Score = 325 bits (832), Expect = 1e-88
Identities = 224/697 (32%), Positives = 366/697 (52%), Gaps = 92/697 (13%)
Query: 76 SSTESVQGSTSKHEFQAETKKLLDIVARSLYSEKEVFIRELISNASDALEKLRHKLVSDG 135
S ++ + K FQAE +++ ++ SLY KE+F+RELISNASDAL+K+R ++D
Sbjct: 64 SQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDE 123
Query: 136 QALP---EMEIHLQTNAEKGTITIQDTGIGMTQEELVSNLGTIARSGSKAFLDAL---QN 189
AL E+ + ++ + EK + + DTG+GMT+EELV NLGTIA+SG+ FL+ + Q
Sbjct: 124 NALSGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQE 183
Query: 190 QAEASSKIIGQFGVGFYSAFMVADRVEVYSRSAAPGSLGYQWLSDGSGVFEIAEASG--V 247
+++S++IGQFGVGFYSAF+VAD+V V S+ + W SD + IA+ G +
Sbjct: 184 DGQSTSELIGQFGVGFYSAFLVADKVIVTSKHN--NDTQHIWESDSNEFSVIADPRGNTL 241
Query: 248 RTGTKIIIHLKSDCKEFSSEARVRDVVTKYSNFVSFPLYLNGRR---------------- 291
GT I + LK + ++ ++++V KYS F++FP+Y+ +
Sbjct: 242 GRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTETVEEPMEEEEAAKE 301
Query: 292 ----------------------------------MNTLQAIWMMDPKDVREWQHEEFYRY 317
MN ++ IW K+V E +++ FY+
Sbjct: 302 EKEESDDEAAVEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQRPSKEVEEDEYKAFYKS 361
Query: 318 VAQAHDKPRYTLHYKTDAPLNIRSIFYVPDMKP-SMFDVSRELGSS----VALYSRKVLI 372
++ D P +H+ + + +SI +VP P +FD E GS + LY R+V I
Sbjct: 362 FSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFD---EYGSKKSDYIKLYVRRVFI 418
Query: 373 QTKATDILPKWLRFIRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQRLIKFFIDQSKK 432
D++PK+L F++GVVDS+D+PLN+SRE LQ+ KL V++++L++ +D KK
Sbjct: 419 TDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQ----HKLLKVIRKKLVRKTLDMIKK 474
Query: 433 DA-EKY-AKFFEDYGLFMREGIVTATEQEVKEDIAKLLRYESSALPSGQLTSLSEYASRM 490
A +KY F++++G ++ G++ + + +AKLLR++SS P+ +TSL +Y RM
Sbjct: 475 IADDKYNDTFWKEFGTNIKLGVI--EDHSNRTRLAKLLRFQSSHHPT-DITSLDQYVERM 531
Query: 491 RAGTRNIYYLCAPNRHLAEHSPYYEAMKKKDTEVLFCFEQFDELTLLHLREFDKKKLISV 550
+ IY++ +R AE SP+ E + KK EV++ E DE + L EFD K+ +V
Sbjct: 532 KEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNV 591
Query: 551 ETDIVVDHYKEEKFEDRSPAAECLSEKETEELMAWMRN-VLGSRVTNVKVTLRLDTHPAM 609
+ V E+ E R EKE E L+ WM++ L ++ V+ RL P
Sbjct: 592 AKEGVKFDESEKTKESREAV-----EKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCA 646
Query: 610 VTVLEMGAARHFLRMQQLAKTQEER------AQLLQPTLEINPRHALIK-KLNQLRASEP 662
+ + G + + R+ + Q + + T EINPRH LI+ L +++ E
Sbjct: 647 LVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRIKEDED 706
Query: 663 GLAQL-LVDQIYENAMIAAG-LVDDPRAMVGRLNELL 697
L L ++E A + +G L+ D +A R+ +L
Sbjct: 707 DKTVLDLAVVLFETATLRSGYLLPDTKAYGDRIERML 743
>gi|154146191 heat shock 90kDa protein 1, alpha isoform 2 [Homo
sapiens]
Length = 732
Score = 196 bits (499), Expect = 5e-50
Identities = 120/421 (28%), Positives = 225/421 (53%), Gaps = 21/421 (4%)
Query: 286 YLNGRRMNTLQAIWMMDPKDVREWQHEEFYRYVAQAHDKPRYTLHYKTDAPLNIRSIFYV 345
Y++ +N + IW +P D+ ++ EFY+ + + H+ + L R++ +V
Sbjct: 284 YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFV 343
Query: 346 PDMKPSMFDVSRELGSSVALYSRKVLIQTKATDILPKWLRFIRGVVDSEDIPLNLSRELL 405
P P +R+ +++ LY R+V I +++P++L FIRGVVDSED+PLN+SRE+L
Sbjct: 344 PRRAPFDLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREML 403
Query: 406 QESALIRKLRDVLQQRLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTATEQEVKEDIA 465
Q+S +++ +R L ++ ++ F + + +D E Y KF+E + ++ GI + + ++ ++
Sbjct: 404 QQSKILKVIRKNLVKKCLELFTELA-EDKENYKKFYEQFSKNIKLGI--HEDSQNRKKLS 460
Query: 466 KLLRYESSALPSGQLTSLSEYASRMRAGTRNIYYLCAPNRHLAEHSPYYEAMKKKDTEVL 525
+LLRY +SA ++ SL +Y +RM+ ++IYY+ + +S + E ++K EV+
Sbjct: 461 ELLRYYTSA-SGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVI 519
Query: 526 FCFEQFDELTLLHLREFDKKKLISVETD-IVVDHYKEEKFEDRSPAAECLSEKET--EEL 582
+ E DE + L+EF+ K L+SV + + + +EEK + EK+T E L
Sbjct: 520 YMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQ--------EEKKTKFENL 571
Query: 583 MAWMRNVLGSRVTNVKVTLRLDTHPAMVTVLEMG---AARHFLRMQQLAKTQEERAQLLQ 639
M+++L +V V V+ RL T P + G ++ Q L +
Sbjct: 572 CKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAK 631
Query: 640 PTLEINPRHALIKKLNQLRASEPGLAQL--LVDQIYENAMIAAGL-VDDPRAMVGRLNEL 696
LEINP H++I+ L Q ++ + LV +YE A++++G ++DP+ R+ +
Sbjct: 632 KHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRM 691
Query: 697 L 697
+
Sbjct: 692 I 692
Score = 180 bits (456), Expect = 5e-45
Identities = 100/241 (41%), Positives = 156/241 (64%), Gaps = 11/241 (4%)
Query: 90 FQAETKKLLDIVARSLYSEKEVFIRELISNASDALEKLRHKLVSDGQALP---EMEIHLQ 146
FQAE +L+ ++ + YS KE+F+RELISN+SDAL+K+R++ ++D L E+ I+L
Sbjct: 22 FQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLI 81
Query: 147 TNAEKGTITIQDTGIGMTQEELVSNLGTIARSGSKAFLDALQNQAEASSKIIGQFGVGFY 206
N + T+TI DTGIGMT+ +L++NLGTIA+SG+KAF++ALQ A+ S +IGQFGVGFY
Sbjct: 82 PNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS--MIGQFGVGFY 139
Query: 207 SAFMVADRVEVYSRSAAPGSLGYQWLSDGSGVFEIAEASG--VRTGTKIIIHLKSDCKEF 264
SA++VA++V V ++ Y W S G F + +G + GTK+I+HLK D E+
Sbjct: 140 SAYLVAEKVTVITKHNDDEQ--YAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEY 197
Query: 265 SSEARVRDVVTKYSNFVSFPLYLNGRRMNTLQAIWMMDPKDVREWQHEEFYRYVAQAHDK 324
E R++++V K+S F+ +P+ L + + D + +E + EE + ++ DK
Sbjct: 198 LEERRIKEIVKKHSQFIGYPITLFVEKERDKEV--SDDEAEEKEDKEEEKEKEEKESEDK 255
Query: 325 P 325
P
Sbjct: 256 P 256
>gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo
sapiens]
Length = 854
Score = 196 bits (499), Expect = 5e-50
Identities = 120/421 (28%), Positives = 225/421 (53%), Gaps = 21/421 (4%)
Query: 286 YLNGRRMNTLQAIWMMDPKDVREWQHEEFYRYVAQAHDKPRYTLHYKTDAPLNIRSIFYV 345
Y++ +N + IW +P D+ ++ EFY+ + + H+ + L R++ +V
Sbjct: 406 YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFV 465
Query: 346 PDMKPSMFDVSRELGSSVALYSRKVLIQTKATDILPKWLRFIRGVVDSEDIPLNLSRELL 405
P P +R+ +++ LY R+V I +++P++L FIRGVVDSED+PLN+SRE+L
Sbjct: 466 PRRAPFDLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREML 525
Query: 406 QESALIRKLRDVLQQRLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTATEQEVKEDIA 465
Q+S +++ +R L ++ ++ F + + +D E Y KF+E + ++ GI + + ++ ++
Sbjct: 526 QQSKILKVIRKNLVKKCLELFTELA-EDKENYKKFYEQFSKNIKLGI--HEDSQNRKKLS 582
Query: 466 KLLRYESSALPSGQLTSLSEYASRMRAGTRNIYYLCAPNRHLAEHSPYYEAMKKKDTEVL 525
+LLRY +SA ++ SL +Y +RM+ ++IYY+ + +S + E ++K EV+
Sbjct: 583 ELLRYYTSA-SGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVI 641
Query: 526 FCFEQFDELTLLHLREFDKKKLISVETD-IVVDHYKEEKFEDRSPAAECLSEKET--EEL 582
+ E DE + L+EF+ K L+SV + + + +EEK + EK+T E L
Sbjct: 642 YMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQ--------EEKKTKFENL 693
Query: 583 MAWMRNVLGSRVTNVKVTLRLDTHPAMVTVLEMG---AARHFLRMQQLAKTQEERAQLLQ 639
M+++L +V V V+ RL T P + G ++ Q L +
Sbjct: 694 CKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAK 753
Query: 640 PTLEINPRHALIKKLNQLRASEPGLAQL--LVDQIYENAMIAAGL-VDDPRAMVGRLNEL 696
LEINP H++I+ L Q ++ + LV +YE A++++G ++DP+ R+ +
Sbjct: 754 KHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRM 813
Query: 697 L 697
+
Sbjct: 814 I 814
Score = 180 bits (456), Expect = 5e-45
Identities = 100/241 (41%), Positives = 156/241 (64%), Gaps = 11/241 (4%)
Query: 90 FQAETKKLLDIVARSLYSEKEVFIRELISNASDALEKLRHKLVSDGQALP---EMEIHLQ 146
FQAE +L+ ++ + YS KE+F+RELISN+SDAL+K+R++ ++D L E+ I+L
Sbjct: 144 FQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLI 203
Query: 147 TNAEKGTITIQDTGIGMTQEELVSNLGTIARSGSKAFLDALQNQAEASSKIIGQFGVGFY 206
N + T+TI DTGIGMT+ +L++NLGTIA+SG+KAF++ALQ A+ S +IGQFGVGFY
Sbjct: 204 PNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS--MIGQFGVGFY 261
Query: 207 SAFMVADRVEVYSRSAAPGSLGYQWLSDGSGVFEIAEASG--VRTGTKIIIHLKSDCKEF 264
SA++VA++V V ++ Y W S G F + +G + GTK+I+HLK D E+
Sbjct: 262 SAYLVAEKVTVITKHNDDEQ--YAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEY 319
Query: 265 SSEARVRDVVTKYSNFVSFPLYLNGRRMNTLQAIWMMDPKDVREWQHEEFYRYVAQAHDK 324
E R++++V K+S F+ +P+ L + + D + +E + EE + ++ DK
Sbjct: 320 LEERRIKEIVKKHSQFIGYPITLFVEKERDKEV--SDDEAEEKEDKEEEKEKEEKESEDK 377
Query: 325 P 325
P
Sbjct: 378 P 378
>gi|20149594 heat shock 90kDa protein 1, beta [Homo sapiens]
Length = 724
Score = 196 bits (498), Expect = 6e-50
Identities = 115/421 (27%), Positives = 225/421 (53%), Gaps = 21/421 (4%)
Query: 286 YLNGRRMNTLQAIWMMDPKDVREWQHEEFYRYVAQAHDKPRYTLHYKTDAPLNIRSIFYV 345
Y++ +N + IW +P D+ + ++ EFY+ + + H+ + L R++ ++
Sbjct: 276 YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFI 335
Query: 346 PDMKPSMFDVSRELGSSVALYSRKVLIQTKATDILPKWLRFIRGVVDSEDIPLNLSRELL 405
P P +++ +++ LY R+V I +++P++L FIRGVVDSED+PLN+SRE+L
Sbjct: 336 PRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 395
Query: 406 QESALIRKLRDVLQQRLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTATEQEVKEDIA 465
Q+S +++ +R + ++ ++ F + +D E Y KF+E + ++ GI + + ++
Sbjct: 396 QQSKILKVIRKNIVKKCLELF-SELAEDKENYKKFYEAFSKNLKLGI--HEDSTNRRRLS 452
Query: 466 KLLRYESSALPSGQLTSLSEYASRMRAGTRNIYYLCAPNRHLAEHSPYYEAMKKKDTEVL 525
+LLRY +S ++TSLSEY SRM+ ++IYY+ ++ +S + E ++K+ EV+
Sbjct: 453 ELLRYHTSQ-SGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVV 511
Query: 526 FCFEQFDELTLLHLREFDKKKLISVE---TDIVVDHYKEEKFEDRSPAAECLSEKETEEL 582
+ E DE + L+EFD K L+SV ++ D +++K E+ S+ + E L
Sbjct: 512 YMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEE--------SKAKFENL 563
Query: 583 MAWMRNVLGSRVTNVKVTLRLDTHPAMVTVLEMG---AARHFLRMQQLAKTQEERAQLLQ 639
M+ +L +V V ++ RL + P + G ++ Q L + +
Sbjct: 564 CKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAK 623
Query: 640 PTLEINPRHALIKKLNQLRASEPG--LAQLLVDQIYENAMIAAGL-VDDPRAMVGRLNEL 696
LEINP H +++ L Q ++ + LV ++E A++++G ++DP+ R+ +
Sbjct: 624 KHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRM 683
Query: 697 L 697
+
Sbjct: 684 I 684
Score = 178 bits (451), Expect = 2e-44
Identities = 97/209 (46%), Positives = 143/209 (68%), Gaps = 11/209 (5%)
Query: 90 FQAETKKLLDIVARSLYSEKEVFIRELISNASDALEKLRHKLVSDGQALP---EMEIHLQ 146
FQAE +L+ ++ + YS KE+F+RELISNASDAL+K+R++ ++D L E++I +
Sbjct: 17 FQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDII 76
Query: 147 TNAEKGTITIQDTGIGMTQEELVSNLGTIARSGSKAFLDALQNQAEASSKIIGQFGVGFY 206
N ++ T+T+ DTGIGMT+ +L++NLGTIA+SG+KAF++ALQ A+ S +IGQFGVGFY
Sbjct: 77 PNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADIS--MIGQFGVGFY 134
Query: 207 SAFMVADRVEVYSRSAAPGSLGYQWLSDGSGVFEIAEASG--VRTGTKIIIHLKSDCKEF 264
SA++VA++V V ++ Y W S G F + G + GTK+I+HLK D E+
Sbjct: 135 SAYLVAEKVVVITKHNDDEQ--YAWESSAGGSFTVRADHGEPIGRGTKVILHLKEDQTEY 192
Query: 265 SSEARVRDVVTKYSNFVSFP--LYLNGRR 291
E RV++VV K+S F+ +P LYL R
Sbjct: 193 LEERRVKEVVKKHSQFIGYPITLYLEKER 221
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 37.0 bits (84), Expect = 0.063
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 3 RELRALLLWGRRLRPLLRAPALAAVPGGKPILCPRRTTAQLGPRRNPAWSLQAGRLFSTQ 62
R++ LLL P L+ P A GG P P P + P + +G
Sbjct: 415 RDIERLLLRSGETEPFLKGPPGGAGEGGPPAQAPP-------PPQQPPTAPPSG------ 461
Query: 63 TAEDKEEPLHSIISSTESVQGSTSKHE 89
+ EEPL S+IS T+S+ G +HE
Sbjct: 462 -LKKYEEPLQSMISQTQSLGGPPLEHE 487
>gi|74048554 cancer susceptibility candidate 5 isoform 2 [Homo
sapiens]
Length = 2316
Score = 32.7 bits (73), Expect = 1.2
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 226 SLGYQWLSDGSGVFEIAEASGVRTGTKIIIHLKSDCKEFSSEARVRDVVTKY 277
+LG + D S V EIAE + G KI++H + + F++ R + + K+
Sbjct: 1196 NLGVSFPKDNSCVQEIAEKQALAVGNKIVLHTEQKQQLFAATNRTTNEIIKF 1247
>gi|74048514 cancer susceptibility candidate 5 isoform 1 [Homo
sapiens]
Length = 2342
Score = 32.7 bits (73), Expect = 1.2
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 226 SLGYQWLSDGSGVFEIAEASGVRTGTKIIIHLKSDCKEFSSEARVRDVVTKY 277
+LG + D S V EIAE + G KI++H + + F++ R + + K+
Sbjct: 1222 NLGVSFPKDNSCVQEIAEKQALAVGNKIVLHTEQKQQLFAATNRTTNEIIKF 1273
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 32.0 bits (71), Expect = 2.0
Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 400 LSRELLQESALIRKLRDVLQQRLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTATEQE 459
LS +L Q++AL ++ ++ K +DQ +K +++Y+ +DY L + Q+
Sbjct: 1312 LSEQLSQQTALFAEI----ERNQTK--LDQCQKFSQQYSTIVKDYELQLMTYKAFVESQQ 1365
Query: 460 VKEDIAKLLRYESSALPSGQLTSLSEYASRMRAGTRNIYYLCAPNRHLAEHSPYYEAMKK 519
+ + S A+ + + Y + + T+++ Y+ R L E E K+
Sbjct: 1366 KSPGKRRRMLSSSDAITQEFMDLRTRYTALVTLTTQHVKYISDALRRLEEEEKVVEEEKQ 1425
Query: 520 KDTE 523
+ E
Sbjct: 1426 EHVE 1429
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 31.6 bits (70), Expect = 2.6
Identities = 32/88 (36%), Positives = 39/88 (44%), Gaps = 19/88 (21%)
Query: 12 GRRLRPLLRAPALAAVPGGKPI-LCPRR-------------TTAQLGP--RRNPAWSLQA 55
GRR+RP RAPA A VPG P P+R + +LGP RR PA +
Sbjct: 487 GRRVRP--RAPA-ARVPGPGPSPSAPQRRLLYGCAGSDSECSAGRLGPLGRRGPAGGVGG 543
Query: 56 GRLFSTQTAEDKEEPLHSIISSTESVQG 83
G S +A + E P S SS G
Sbjct: 544 GYGESESSASEGESPAFSSASSDSDGSG 571
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 31.6 bits (70), Expect = 2.6
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 18/187 (9%)
Query: 414 LRDVLQQRLIKFFIDQSKKDAEKYAKF------FEDYGLFMREGIVTATEQEVKEDIAKL 467
++D Q++L++ + Q+K+ KYAK E+ +R QE K+D++K
Sbjct: 2546 IKDSQQKQLLEVQLQQNKELENKYAKLEEKLKESEEANEDLRRSFNAL--QEEKQDLSK- 2602
Query: 468 LRYESSALPSGQLTSLSEYASRMRAGTRNIYY--LCAPNRHLAEHSPYYEAMKKKDTEV- 524
ES + QLT + + GT +Y+ L + S + + +K+ E+
Sbjct: 2603 -EIESLKVSISQLT--RQVTALQEEGTLGLYHAQLKVKEEEVHRLSALFSSSQKRIAELE 2659
Query: 525 --LFCFEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDR-SPAAECLSEKETEE 581
L C ++ + + + KK+L + D + + E E+R + A L E E +
Sbjct: 2660 EELVCVQKEAAKKVGEIEDKLKKELKHLHHDAGIMRNETETAEERVAELARDLVEMEQKL 2719
Query: 582 LMAWMRN 588
LM N
Sbjct: 2720 LMVTKEN 2726
>gi|212286181 parvin, gamma [Homo sapiens]
Length = 331
Score = 31.2 bits (69), Expect = 3.4
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 26/127 (20%)
Query: 46 RRNPAWSLQAGRLFSTQTAEDKEEPLHSIISSTESVQGSTSKHEFQAETKKLLDIVARSL 105
+R A L+A + T T++ H + E+V S E+QA+
Sbjct: 83 QRLAALKLEAEDIALTATSQK-----HKLTVVLEAVNRSLQLEEWQAK------------ 125
Query: 106 YSEKEVFIRELISNASDALEKLRHKLVSDGQALPEMEIHLQTNAEKGTITIQDTGIGMTQ 165
+S + +F ++L+S H LV+ + + ++ L TN + ITI+ T G+
Sbjct: 126 WSVESIFNKDLLSTL--------HLLVALAKRF-QPDLSLPTNVQVEVITIESTKSGLKS 176
Query: 166 EELVSNL 172
E+LV L
Sbjct: 177 EKLVEQL 183
>gi|212286179 parvin, gamma [Homo sapiens]
Length = 331
Score = 31.2 bits (69), Expect = 3.4
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 26/127 (20%)
Query: 46 RRNPAWSLQAGRLFSTQTAEDKEEPLHSIISSTESVQGSTSKHEFQAETKKLLDIVARSL 105
+R A L+A + T T++ H + E+V S E+QA+
Sbjct: 83 QRLAALKLEAEDIALTATSQK-----HKLTVVLEAVNRSLQLEEWQAK------------ 125
Query: 106 YSEKEVFIRELISNASDALEKLRHKLVSDGQALPEMEIHLQTNAEKGTITIQDTGIGMTQ 165
+S + +F ++L+S H LV+ + + ++ L TN + ITI+ T G+
Sbjct: 126 WSVESIFNKDLLSTL--------HLLVALAKRF-QPDLSLPTNVQVEVITIESTKSGLKS 176
Query: 166 EELVSNL 172
E+LV L
Sbjct: 177 EKLVEQL 183
>gi|11545879 parvin, gamma [Homo sapiens]
Length = 331
Score = 31.2 bits (69), Expect = 3.4
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 26/127 (20%)
Query: 46 RRNPAWSLQAGRLFSTQTAEDKEEPLHSIISSTESVQGSTSKHEFQAETKKLLDIVARSL 105
+R A L+A + T T++ H + E+V S E+QA+
Sbjct: 83 QRLAALKLEAEDIALTATSQK-----HKLTVVLEAVNRSLQLEEWQAK------------ 125
Query: 106 YSEKEVFIRELISNASDALEKLRHKLVSDGQALPEMEIHLQTNAEKGTITIQDTGIGMTQ 165
+S + +F ++L+S H LV+ + + ++ L TN + ITI+ T G+
Sbjct: 126 WSVESIFNKDLLSTL--------HLLVALAKRF-QPDLSLPTNVQVEVITIESTKSGLKS 176
Query: 166 EELVSNL 172
E+LV L
Sbjct: 177 EKLVEQL 183
>gi|190684699 nudix (nucleoside diphosphate linked moiety X)-type
motif 22 isoform b [Homo sapiens]
Length = 270
Score = 31.2 bits (69), Expect = 3.4
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 9 LLWGRRLRPLLRAPALAAVPGGKP---ILCPRRTTAQ---LGPRRNPAWSLQAGRLFSTQ 62
L++ RR R + AP L VPGG P + P T +Q LG RN + +A F Q
Sbjct: 134 LVFLRRSRQVAEAPGLVDVPGGHPEPQVNLPLLTLSQPLLLGIARNETSAGRASAEFYVQ 193
Query: 63 TAEDKEEPLHSIISSTESVQGSTSKHEFQAETKKLLDIVARSLYSE 108
+ E+ +S ST F ET+ + + +++E
Sbjct: 194 CSLTSEQVRKHYLSGGPEAHESTG--IFFVETQNVRRLPETEMWAE 237
>gi|4502395 beclin 1 [Homo sapiens]
Length = 450
Score = 30.8 bits (68), Expect = 4.5
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 392 DSEDIPLNLSRELLQESALIRKLRDVLQQR-LIKFFIDQSKKDAEKY----AKFFEDYGL 446
DSE + + L L+E LI++L DV + R ++ +++ + +AE+ A++ +Y
Sbjct: 176 DSEQLQMELKELALEEERLIQELEDVEKNRKIVAENLEKVQAEAERLDQEEAQYQREYSE 235
Query: 447 FMREGIVTATEQEVKEDIAKLLRYESSALPSGQLTSL 483
F R+ + + E+K + +RY + L + T++
Sbjct: 236 FKRQQL--ELDDELK-SVENQMRYAQTQLDKLKKTNV 269
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 30.4 bits (67), Expect = 5.9
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 108 EKEVFIRELISNASDALEKLRHKLVSDGQALPEMEIHLQTNAEKGTITIQDTG--IGMTQ 165
EK+ + + + A + LRH++ +L + E L+ AEK T QD +
Sbjct: 530 EKQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAA 589
Query: 166 EELVSNLGTIARSGSKAFLDALQNQAEASSKIIGQ 200
EE ++L R + L+AL+ + A +I+ Q
Sbjct: 590 EEREASLR--ERDAALKQLEALEKEKAAKLEILQQ 622
>gi|42741679 ATPase, H+ transporting, lysosomal V0 subunit A2 [Homo
sapiens]
Length = 856
Score = 30.4 bits (67), Expect = 5.9
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Query: 357 RELGSSVALYSRKVLIQTKATDILPKWLRFIRGVVDSEDIPLNLSRELLQESALIRKLRD 416
R+L +V+ + RK + + K + L + L ++ ++ DIPL L + L
Sbjct: 38 RDLNQNVSSFQRKFVGEVKRCEELERILVYLVQEINRADIPLPEGEASPPAPPLKQVLEM 97
Query: 417 VLQQRLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTATEQEVKEDIAKLLRYESSALP 476
Q + ++ + + K+ EK K + L ++ T+ VK ++ YE P
Sbjct: 98 QEQLQKLEVELREVTKNKEKLRKNLLE--LIEYTHMLRVTKTFVKRNVEFEPTYEE--FP 153
Query: 477 SGQLTSLSEYASRMRAGTR 495
S + SL +Y+ R G +
Sbjct: 154 SLESDSLLDYSCMQRLGAK 172
>gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens]
Length = 412
Score = 30.4 bits (67), Expect = 5.9
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 10 LWGRRLRPLLRAPALAAVPGGKPILCPRRTTAQL 43
LW RR R L A L + P P+ C R TT L
Sbjct: 363 LWDRRQRACLHAFPLTSTPLSSPVYCLRLTTKHL 396
>gi|239752942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 30.0 bits (66), Expect = 7.7
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 5 LRALLLWGRRLRPLLRAPALAAVPGGKPILCPRRTTAQLG 44
L A+ GR L LRAPA V GG +LCPRR + G
Sbjct: 225 LTAIRRPGRMLFRGLRAPA-QVVSGGSAVLCPRRVLGRGG 263
>gi|239747476 PREDICTED: hypothetical protein XP_002347543 [Homo
sapiens]
Length = 278
Score = 30.0 bits (66), Expect = 7.7
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 5 LRALLLWGRRLRPLLRAPALAAVPGGKPILCPRRTTAQLG 44
L A+ GR L LRAPA V GG +LCPRR + G
Sbjct: 225 LTAIRRPGRMLFRGLRAPA-QVVSGGSAVLCPRRVLGRGG 263
>gi|239741348 PREDICTED: hypothetical protein XP_002342180 [Homo
sapiens]
Length = 278
Score = 30.0 bits (66), Expect = 7.7
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 5 LRALLLWGRRLRPLLRAPALAAVPGGKPILCPRRTTAQLG 44
L A+ GR L LRAPA V GG +LCPRR + G
Sbjct: 225 LTAIRRPGRMLFRGLRAPA-QVVSGGSAVLCPRRVLGRGG 263
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 30.0 bits (66), Expect = 7.7
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 67 KEEPLHSIISSTESVQGSTSKHEFQAETKKLLD---IVARSLYSEKEVF-----IRELIS 118
K+E L + V+G E + + ++LL+ I+A L +E E+F +R ++
Sbjct: 857 KDEELLKVKEKQTKVEGELE--EMERKHQQLLEEKNILAEQLQAETELFAEAEEMRARLA 914
Query: 119 NASDALEKLRHKLVSDGQALPEMEIHLQTNAEKGTITIQDTGIGMTQEE 167
LE++ H L S + E LQ +K IQD + +EE
Sbjct: 915 AKKQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLDEEE 963
>gi|51230412 GTPase activating Rap/RanGAP domain-like 1 isoform 2
[Homo sapiens]
Length = 2083
Score = 30.0 bits (66), Expect = 7.7
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 558 HYKEEKFEDRSPAAECLSEKETEEL--MAWMRNVLGSRVTNVKVTLRLDTHPAMVTVLEM 615
H +R P++ L + E L + +R V S+ +NV + ++ + E
Sbjct: 367 HSNTSTLTEREPSSSSLCSIDEEHLTDIEIVRRVFSSKRSNVNFVTEIFRQAFLLPICEA 426
Query: 616 GAARHFLRMQQLAKTQEERAQLLQPTLEI 644
A R +++ Q QEE+ +Q EI
Sbjct: 427 AAMRKVVKVYQEWIQQEEKPLFMQEPEEI 455
>gi|51226124 GTPase activating Rap/RanGAP domain-like 1 isoform 1
[Homo sapiens]
Length = 2036
Score = 30.0 bits (66), Expect = 7.7
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 558 HYKEEKFEDRSPAAECLSEKETEEL--MAWMRNVLGSRVTNVKVTLRLDTHPAMVTVLEM 615
H +R P++ L + E L + +R V S+ +NV + ++ + E
Sbjct: 367 HSNTSTLTEREPSSSSLCSIDEEHLTDIEIVRRVFSSKRSNVNFVTEIFRQAFLLPICEA 426
Query: 616 GAARHFLRMQQLAKTQEERAQLLQPTLEI 644
A R +++ Q QEE+ +Q EI
Sbjct: 427 AAMRKVVKVYQEWIQQEEKPLFMQEPEEI 455
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 29.6 bits (65), Expect = 10.0
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 17 PLLRAPALAAVPG--GKPILCPRRTTAQLGPRRNPAWSLQAGRLFSTQTAEDKEEPLHS 73
P + APA+ A+PG G L P R + R P + G+ FS T + + H+
Sbjct: 450 PAVAAPAVVAIPGPAGSAALTPARQRRRRRARDRPTICGECGKGFSRSTDLVRHQATHT 508
>gi|242247001 clathrin, heavy polypeptide-like 1 isoform 2 [Homo
sapiens]
Length = 1583
Score = 29.6 bits (65), Expect = 10.0
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 332 KTDAPLNIRSIFYVPDMKPSMFDVSRELGSSVALYSRKVLIQTKATDILPKWLRFIRGVV 391
KT P+ S++ ++ + E G +K+++ K P W+ +RGV+
Sbjct: 468 KTTDPMLALSVYLRANVPSKVIQCFAETGQF-----QKIVLYAKKVGYTPDWIFLLRGVM 522
Query: 392 D-SEDIPLNLSRELLQES---ALIRKLRDV-----LQQRLIKFFIDQSKKD 433
S + L SR L+Q+ A I ++ D+ L Q+ F +D K +
Sbjct: 523 KISPEQGLQFSRMLVQDEEPLANISQIVDIFMENSLIQQCTSFLLDALKNN 573
>gi|242246985 clathrin, heavy polypeptide-like 1 isoform 1 [Homo
sapiens]
Length = 1640
Score = 29.6 bits (65), Expect = 10.0
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 332 KTDAPLNIRSIFYVPDMKPSMFDVSRELGSSVALYSRKVLIQTKATDILPKWLRFIRGVV 391
KT P+ S++ ++ + E G +K+++ K P W+ +RGV+
Sbjct: 468 KTTDPMLALSVYLRANVPSKVIQCFAETGQF-----QKIVLYAKKVGYTPDWIFLLRGVM 522
Query: 392 D-SEDIPLNLSRELLQES---ALIRKLRDV-----LQQRLIKFFIDQSKKD 433
S + L SR L+Q+ A I ++ D+ L Q+ F +D K +
Sbjct: 523 KISPEQGLQFSRMLVQDEEPLANISQIVDIFMENSLIQQCTSFLLDALKNN 573
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 29.6 bits (65), Expect = 10.0
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 65 EDKEEPLHSIISSTESVQGSTSKHE-FQAETKKLLDIVARSLYSEKEVFIRE--LISNAS 121
E+KEE + S + +T++ E E K+ +++AR++ EKE +RE +
Sbjct: 687 EEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAV-QEKEALVREKAALEVRL 745
Query: 122 DALEKLRHKLVSDGQALPEMEIHLQTNAEKGTITIQDTGIGMTQEELVSNLGTIARSGS- 180
A+E+ R L Q L + L+++ + Q++ I +T+ +L + T+ ++
Sbjct: 746 QAVERDRQDLAEQLQGLSSAKELLESSLFEA--QQQNSVIEVTKGQLEVQIQTVTQAKEV 803
Query: 181 --------KAFLDALQNQAE 192
K LD ++QAE
Sbjct: 804 IQGEVRCLKLELDTERSQAE 823
>gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2
[Homo sapiens]
Length = 994
Score = 29.6 bits (65), Expect = 10.0
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 377 TDILPKWLRFIRGVVDSEDIPLNLSREL-LQESALIRKLRDVLQQRL-IKFFIDQSKKDA 434
T I+ +WL+ + I L+ E LQ L+ ++D+L R +K + + +A
Sbjct: 312 TGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNA 371
Query: 435 EKYAKFFEDYGLFMREGIVTATEQEVKEDIAKLLRY 470
EK++++F + + G + + ED+ + +RY
Sbjct: 372 EKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRY 407
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,802,266
Number of Sequences: 37866
Number of extensions: 1010839
Number of successful extensions: 3171
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 3125
Number of HSP's gapped (non-prelim): 48
length of query: 704
length of database: 18,247,518
effective HSP length: 109
effective length of query: 595
effective length of database: 14,120,124
effective search space: 8401473780
effective search space used: 8401473780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.