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Search of human proteins with 15529970
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15529970 membralin isoform 2 [Homo sapiens]
(408 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15529970 membralin isoform 2 [Homo sapiens] 827 0.0
gi|74229025 membralin isoform 1 [Homo sapiens] 823 0.0
gi|55741677 SET domain containing 1A [Homo sapiens] 33 0.47
gi|89886480 zinedin isoform 2 [Homo sapiens] 33 0.61
gi|89886477 zinedin isoform 1 [Homo sapiens] 33 0.61
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 33 0.61
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 33 0.61
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 33 0.61
gi|7705720 mediator of cell motility 1 isoform 1 [Homo sapiens] 32 1.0
gi|212286159 mediator of cell motility 1 isoform 2 [Homo sapiens] 32 1.0
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 32 1.0
gi|16418457 solute carrier family 26, member 8 isoform a [Homo s... 32 1.4
gi|20336285 solute carrier family 26, member 8 isoform b [Homo s... 32 1.4
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 31 1.8
gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens] 31 1.8
gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 31 1.8
gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 31 1.8
gi|28557798 family with sequence similarity 84, member B [Homo s... 31 1.8
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 31 2.3
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 31 2.3
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 31 2.3
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 31 2.3
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 31 2.3
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 31 2.3
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 31 2.3
gi|157311635 FAM83H [Homo sapiens] 31 2.3
gi|110227615 echinoderm microtubule associated protein like 3 [H... 31 2.3
gi|158631177 homeodomain leucine zipper protein [Homo sapiens] 31 2.3
gi|16950633 argininosuccinate synthetase 1 [Homo sapiens] 30 3.0
gi|53759107 argininosuccinate synthetase 1 [Homo sapiens] 30 3.0
>gi|15529970 membralin isoform 2 [Homo sapiens]
Length = 408
Score = 827 bits (2136), Expect = 0.0
Identities = 408/408 (100%), Positives = 408/408 (100%)
Query: 1 MSEHVEPAAPGPGPNGGGGGPAPARGPRTPNLNPNPLINVRDRLFHALFFKMAVTYSRLF 60
MSEHVEPAAPGPGPNGGGGGPAPARGPRTPNLNPNPLINVRDRLFHALFFKMAVTYSRLF
Sbjct: 1 MSEHVEPAAPGPGPNGGGGGPAPARGPRTPNLNPNPLINVRDRLFHALFFKMAVTYSRLF 60
Query: 61 PPAFRRLFEFFVLLKALFVLFVLAYIHIVFSRSPINCLEHVRDKWPREGILRVEVRHNSS 120
PPAFRRLFEFFVLLKALFVLFVLAYIHIVFSRSPINCLEHVRDKWPREGILRVEVRHNSS
Sbjct: 61 PPAFRRLFEFFVLLKALFVLFVLAYIHIVFSRSPINCLEHVRDKWPREGILRVEVRHNSS 120
Query: 121 RAPVFLQFCDSGGRGSFPGLAVEPGSNLDMEDEEEEELTMEMFGNSSIKFELDIEPKVFK 180
RAPVFLQFCDSGGRGSFPGLAVEPGSNLDMEDEEEEELTMEMFGNSSIKFELDIEPKVFK
Sbjct: 121 RAPVFLQFCDSGGRGSFPGLAVEPGSNLDMEDEEEEELTMEMFGNSSIKFELDIEPKVFK 180
Query: 181 PPSSTEALNDSQEFPFPETPTKVWPQDEYIVEYSLEYGFLRLSQATRQRLSIPVMVVTLD 240
PPSSTEALNDSQEFPFPETPTKVWPQDEYIVEYSLEYGFLRLSQATRQRLSIPVMVVTLD
Sbjct: 181 PPSSTEALNDSQEFPFPETPTKVWPQDEYIVEYSLEYGFLRLSQATRQRLSIPVMVVTLD 240
Query: 241 PTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYRFVSMWMA 300
PTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYRFVSMWMA
Sbjct: 241 PTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYRFVSMWMA 300
Query: 301 RTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPLLTVILAL 360
RTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPLLTVILAL
Sbjct: 301 RTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPLLTVILAL 360
Query: 361 VGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRIP 408
VGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRIP
Sbjct: 361 VGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRIP 408
>gi|74229025 membralin isoform 1 [Homo sapiens]
Length = 620
Score = 823 bits (2125), Expect = 0.0
Identities = 406/406 (100%), Positives = 406/406 (100%)
Query: 1 MSEHVEPAAPGPGPNGGGGGPAPARGPRTPNLNPNPLINVRDRLFHALFFKMAVTYSRLF 60
MSEHVEPAAPGPGPNGGGGGPAPARGPRTPNLNPNPLINVRDRLFHALFFKMAVTYSRLF
Sbjct: 1 MSEHVEPAAPGPGPNGGGGGPAPARGPRTPNLNPNPLINVRDRLFHALFFKMAVTYSRLF 60
Query: 61 PPAFRRLFEFFVLLKALFVLFVLAYIHIVFSRSPINCLEHVRDKWPREGILRVEVRHNSS 120
PPAFRRLFEFFVLLKALFVLFVLAYIHIVFSRSPINCLEHVRDKWPREGILRVEVRHNSS
Sbjct: 61 PPAFRRLFEFFVLLKALFVLFVLAYIHIVFSRSPINCLEHVRDKWPREGILRVEVRHNSS 120
Query: 121 RAPVFLQFCDSGGRGSFPGLAVEPGSNLDMEDEEEEELTMEMFGNSSIKFELDIEPKVFK 180
RAPVFLQFCDSGGRGSFPGLAVEPGSNLDMEDEEEEELTMEMFGNSSIKFELDIEPKVFK
Sbjct: 121 RAPVFLQFCDSGGRGSFPGLAVEPGSNLDMEDEEEEELTMEMFGNSSIKFELDIEPKVFK 180
Query: 181 PPSSTEALNDSQEFPFPETPTKVWPQDEYIVEYSLEYGFLRLSQATRQRLSIPVMVVTLD 240
PPSSTEALNDSQEFPFPETPTKVWPQDEYIVEYSLEYGFLRLSQATRQRLSIPVMVVTLD
Sbjct: 181 PPSSTEALNDSQEFPFPETPTKVWPQDEYIVEYSLEYGFLRLSQATRQRLSIPVMVVTLD 240
Query: 241 PTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYRFVSMWMA 300
PTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYRFVSMWMA
Sbjct: 241 PTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYRFVSMWMA 300
Query: 301 RTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPLLTVILAL 360
RTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPLLTVILAL
Sbjct: 301 RTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPLLTVILAL 360
Query: 361 VGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLR 406
VGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLR
Sbjct: 361 VGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLR 406
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 33.1 bits (74), Expect = 0.47
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 2 SEHVEPAAPGPGPNGGGGGPAPAR 25
SE P P PG GGGGGP+P R
Sbjct: 430 SEAPPPEPPEPGGGGGGGGPSPER 453
>gi|89886480 zinedin isoform 2 [Homo sapiens]
Length = 760
Score = 32.7 bits (73), Expect = 0.61
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 5 VEPAAPGPGPN----GGGGGPAPARGPRTPNL 32
V APGPGP GGGG P P GP +L
Sbjct: 34 VSAPAPGPGPAGKGGGGGGSPGPTAGPEPLSL 65
>gi|89886477 zinedin isoform 1 [Homo sapiens]
Length = 753
Score = 32.7 bits (73), Expect = 0.61
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 5 VEPAAPGPGPN----GGGGGPAPARGPRTPNL 32
V APGPGP GGGG P P GP +L
Sbjct: 34 VSAPAPGPGPAGKGGGGGGSPGPTAGPEPLSL 65
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 32.7 bits (73), Expect = 0.61
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 7 PAAPGPGPNGGGGGPAPARGPRT 29
P A P GGGGGP P GP T
Sbjct: 722 PGADTSAPTGGGGGPGPGAGPGT 744
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 32.7 bits (73), Expect = 0.61
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 7 PAAPGPGPNGGGGGPAPARGPRT 29
P A P GGGGGP P GP T
Sbjct: 157 PGADTSAPTGGGGGPGPGAGPGT 179
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 32.7 bits (73), Expect = 0.61
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 7 PAAPGPGPNGGGGGPAPARGPRT 29
P A P GGGGGP P GP T
Sbjct: 319 PGADTSAPTGGGGGPGPGAGPGT 341
>gi|7705720 mediator of cell motility 1 isoform 1 [Homo sapiens]
Length = 297
Score = 32.0 bits (71), Expect = 1.0
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 206 QDEYIVEYSLEYGFLRLSQATRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLD 257
+DE+ +E L Y + + IPV+V L +++Q FG FS+ L D
Sbjct: 128 EDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLAD 179
>gi|212286159 mediator of cell motility 1 isoform 2 [Homo sapiens]
Length = 274
Score = 32.0 bits (71), Expect = 1.0
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 206 QDEYIVEYSLEYGFLRLSQATRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLD 257
+DE+ +E L Y + + IPV+V L +++Q FG FS+ L D
Sbjct: 105 EDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLAD 156
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 32.0 bits (71), Expect = 1.0
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 2 SEHVEPAAPGPGPNGGGGG----PAPARGPRTPNLNPNP 36
+E P P P GGGGG PAPA P P+ +P P
Sbjct: 1177 TEAEPPTQPEPTGGGGGGGSSPSPAPAMSPVPPSPSPVP 1215
>gi|16418457 solute carrier family 26, member 8 isoform a [Homo
sapiens]
Length = 970
Score = 31.6 bits (70), Expect = 1.4
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 142 VEPGSNLDMEDEEEEELTMEMFGNSSIKFELDIEPKVFKPPSSTEALNDSQEFPFPETPT 201
VE S LD+E E E+E + + + + ++EP++ +P + TE ++ P PET
Sbjct: 854 VEEESELDLELESEQEAGLGL----DLDLDRELEPEM-EPKAETETKTQTEMEPQPETEP 908
Query: 202 KVWP 205
++ P
Sbjct: 909 EMEP 912
>gi|20336285 solute carrier family 26, member 8 isoform b [Homo
sapiens]
Length = 865
Score = 31.6 bits (70), Expect = 1.4
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 142 VEPGSNLDMEDEEEEELTMEMFGNSSIKFELDIEPKVFKPPSSTEALNDSQEFPFPETPT 201
VE S LD+E E E+E + + + + ++EP++ +P + TE ++ P PET
Sbjct: 749 VEEESELDLELESEQEAGLGL----DLDLDRELEPEM-EPKAETETKTQTEMEPQPETEP 803
Query: 202 KVWP 205
++ P
Sbjct: 804 EMEP 807
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 31.2 bits (69), Expect = 1.8
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 7 PAAPGPGPNGGGGGPAPAR--GPRTPNLNPNP 36
P P PGP+GG GGP R GP P +P
Sbjct: 647 PGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDP 678
>gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens]
Length = 1844
Score = 31.2 bits (69), Expect = 1.8
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 7/129 (5%)
Query: 131 SGGRGSFPGLAVEPGSNLDMEDEEEEELTMEMFGNSSIKFELDIEPKVFKPPSSTEALND 190
SG + + P + + + + EE+ M + N IK E K ST A N
Sbjct: 1226 SGPKRALPPKTLANYFKVSPKPKNNEEIGMLLENNKGIKNSF--EQKQITQTKSTNATNS 1283
Query: 191 S-----QEFPFPETPTKVWPQDEYIVEYSLEYGFLRLSQATRQRLSIPVMVVTLDPTRDQ 245
+ E P + T + +E V + + GFL + PV++ T DPT
Sbjct: 1284 NVKDVGAEEPSRKNATSLILFEEVDVIFDEDAGFLNAIKTFMATTKRPVILTTSDPTFSL 1343
Query: 246 CFGDRFSRL 254
F F +
Sbjct: 1344 MFDGCFEEI 1352
>gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]
Length = 636
Score = 31.2 bits (69), Expect = 1.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 3 EHVEPAAPGPGPNGGGGGPAPARGPRTPNLN 33
+ + APGPGP GGGG A A + NL+
Sbjct: 32 DQADMEAPGPGPCGGGGSLAAAAEAQRENLS 62
>gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]
Length = 637
Score = 31.2 bits (69), Expect = 1.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 3 EHVEPAAPGPGPNGGGGGPAPARGPRTPNLN 33
+ + APGPGP GGGG A A + NL+
Sbjct: 32 DQADMEAPGPGPCGGGGSLAAAAEAQRENLS 62
>gi|28557798 family with sequence similarity 84, member B [Homo
sapiens]
Length = 310
Score = 31.2 bits (69), Expect = 1.8
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 3 EHVEPAAPGPGPNGGGGGPAPARGPRTPNLNPNPLINVRDRLFHALFFKMAVTYSRLFPP 62
E VEP P GP+GGG P G P P P + ++F++ Y + F P
Sbjct: 43 EDVEPQPPPQGPDGGG---LPDGGDGPPPPQPQPYDPRLHEVECSVFYRDECIYQKSFAP 99
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 30.8 bits (68), Expect = 2.3
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 5 VEPAAPGPGPNGGGGGPAPARGPRTPN 31
V PGPGP G GP P GP PN
Sbjct: 225 VSATGPGPGP---GPGPGPGPGPAPPN 248
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 30.8 bits (68), Expect = 2.3
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 5 VEPAAPGPGPNGGGGGPAPARGPRTPN 31
V PGPGP G GP P GP PN
Sbjct: 225 VSATGPGPGP---GPGPGPGPGPAPPN 248
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 30.8 bits (68), Expect = 2.3
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 5 VEPAAPGPGPNGGGGGPAPARGPRTPN 31
V PGPGP G GP P GP PN
Sbjct: 225 VSATGPGPGP---GPGPGPGPGPAPPN 248
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 30.8 bits (68), Expect = 2.3
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 5 VEPAAPGPGPNGGGGGPAPARGPRTPN 31
V PGPGP G GP P GP PN
Sbjct: 225 VSATGPGPGP---GPGPGPGPGPAPPN 248
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 30.8 bits (68), Expect = 2.3
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 5 VEPAAPGPGPNGGGGGPAPARGPRTPN 31
V PGPGP G GP P GP PN
Sbjct: 225 VSATGPGPGP---GPGPGPGPGPAPPN 248
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 30.8 bits (68), Expect = 2.3
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 5 VEPAAPGPGPNGGGGGPAPARGPRTPN 31
V PGPGP G GP P GP PN
Sbjct: 225 VSATGPGPGP---GPGPGPGPGPAPPN 248
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 30.8 bits (68), Expect = 2.3
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 5 VEPAAPGPGPNGGGGGPAPARGPRTPN 31
V PGPGP G GP P GP PN
Sbjct: 225 VSATGPGPGP---GPGPGPGPGPAPPN 248
>gi|157311635 FAM83H [Homo sapiens]
Length = 1179
Score = 30.8 bits (68), Expect = 2.3
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 9/49 (18%)
Query: 10 PGPGPNGGGGGPAPARGPRTPNL--------NPNPLINVRDRLFHALFF 50
P PGP GG GP GP P L NPL+ RL +L F
Sbjct: 641 PVPGPGSGGNGP-EREGPEEPGLAKQDSFRSRLNPLVQRSSRLRSSLIF 688
>gi|110227615 echinoderm microtubule associated protein like 3 [Homo
sapiens]
Length = 896
Score = 30.8 bits (68), Expect = 2.3
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 17 GGGGPAPARGPRTPNLNPNPLINV 40
GG GPAPA RTP+L+P ++V
Sbjct: 873 GGAGPAPATPSRTPSLSPASSLDV 896
>gi|158631177 homeodomain leucine zipper protein [Homo sapiens]
Length = 550
Score = 30.8 bits (68), Expect = 2.3
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 175 EPKVFKPPSSTEALNDSQE---FPFPETPTKVWPQDEYIVEYS--LEYGFLRLSQATR 227
+P + PP ST +LN+ E P P P + P + Y + E +LSQA+R
Sbjct: 432 DPAIPTPPPSTRSLNERAETPPLPIPPPPPDIQPLERYWAAHQQLRETDIPQLSQASR 489
>gi|16950633 argininosuccinate synthetase 1 [Homo sapiens]
Length = 412
Score = 30.4 bits (67), Expect = 3.0
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 17/74 (22%)
Query: 164 GNSSIKFELDI-----EPKVFKPPSSTE------ALNDSQEF------PFPETPTKVWPQ 206
GN ++FEL + KV P E ND E+ P P TP W
Sbjct: 122 GNDQVRFELSCYSLAPQIKVIAPWRMPEFYNRFKGRNDLMEYAKQHGIPIPVTPKNPWSM 181
Query: 207 DEYIVEYSLEYGFL 220
DE ++ S E G L
Sbjct: 182 DENLMHISYEAGIL 195
>gi|53759107 argininosuccinate synthetase 1 [Homo sapiens]
Length = 412
Score = 30.4 bits (67), Expect = 3.0
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 17/74 (22%)
Query: 164 GNSSIKFELDI-----EPKVFKPPSSTE------ALNDSQEF------PFPETPTKVWPQ 206
GN ++FEL + KV P E ND E+ P P TP W
Sbjct: 122 GNDQVRFELSCYSLAPQIKVIAPWRMPEFYNRFKGRNDLMEYAKQHGIPIPVTPKNPWSM 181
Query: 207 DEYIVEYSLEYGFL 220
DE ++ S E G L
Sbjct: 182 DENLMHISYEAGIL 195
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.140 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,623,592
Number of Sequences: 37866
Number of extensions: 831126
Number of successful extensions: 7984
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 7534
Number of HSP's gapped (non-prelim): 457
length of query: 408
length of database: 18,247,518
effective HSP length: 105
effective length of query: 303
effective length of database: 14,271,588
effective search space: 4324291164
effective search space used: 4324291164
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.