Search of human proteins with 155030188

Search of human proteins with 155030188

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|155030188 mediator complex subunit 7 [Homo sapiens]
         (233 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|155030188 mediator complex subunit 7 [Homo sapiens]                477   e-135
gi|4758064 mediator complex subunit 7 [Homo sapiens]                  477   e-135
gi|4758316 ets variant gene 5 (ets-related molecule) [Homo sapiens]    32   0.61 
gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens]           32   0.61 
gi|116734681 socius isoform 1 [Homo sapiens]                           31   0.79 
gi|116734679 socius isoform 2 [Homo sapiens]                           31   0.79 
gi|38016202 SATB homeobox 2 [Homo sapiens]                             31   0.79 
gi|167466160 chloride channel 7 isoform b [Homo sapiens]               31   1.0  
gi|14149607 chloride channel 7 isoform a [Homo sapiens]                31   1.0  
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]             30   1.4  
gi|58530845 zyxin [Homo sapiens]                                       30   1.8  
gi|4508047 zyxin [Homo sapiens]                                        30   1.8  
gi|150010604 kinesin family member 4B [Homo sapiens]                   30   2.3  
gi|31317228 early growth response 3 [Homo sapiens]                     30   2.3  
gi|54792138 helicase with zinc finger domain [Homo sapiens]            30   2.3  
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]         30   2.3  
gi|40538794 coiled-coil domain containing 21 [Homo sapiens]            30   2.3  
gi|66954681 PRAME family member 13 [Homo sapiens]                      30   2.3  
gi|5579478 mitogen-activated protein kinase kinase 1 [Homo sapiens]    29   3.0  
gi|75677353 AAA-ATPase  TOB3 [Homo sapiens]                            29   3.0  
gi|239582714 leucine rich repeat containing 17 isoform 2 [Homo s...    29   3.9  
gi|238908497 sciellin isoform 2 [Homo sapiens]                         29   3.9  
gi|58331242 formin homology 2 domain containing 3 [Homo sapiens]       29   3.9  
gi|203098334 Myc-binding protein-associated protein [Homo sapiens]     29   3.9  
gi|122891872 microcephalin [Homo sapiens]                              28   5.2  
gi|153085395 histone deacetylase 4 [Homo sapiens]                      28   5.2  
gi|113722120 G protein-coupled receptor 98 precursor [Homo sapiens]    28   5.2  
gi|12738831 PRAME family member 1 [Homo sapiens]                       28   5.2  
gi|157266266 WD repeat domain 86 [Homo sapiens]                        28   5.2  
gi|116174778 centrosome spindle pole associated protein 1 isofor...    28   5.2  

>gi|155030188 mediator complex subunit 7 [Homo sapiens]
          Length = 233

 Score =  477 bits (1227), Expect = e-135
 Identities = 233/233 (100%), Positives = 233/233 (100%)

Query: 1   MGEPQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCDDLIIRPLE 60
           MGEPQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCDDLIIRPLE
Sbjct: 1   MGEPQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCDDLIIRPLE 60

Query: 61  SQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVH 120
           SQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVH
Sbjct: 61  SQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVH 120

Query: 121 HLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASLPDDLPHSEA 180
           HLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASLPDDLPHSEA
Sbjct: 121 HLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASLPDDLPHSEA 180

Query: 181 GMRVKTEPMDADDSNNCTGQNEHQRENSGHRRDQIIEKDAALCVLIDEMNERP 233
           GMRVKTEPMDADDSNNCTGQNEHQRENSGHRRDQIIEKDAALCVLIDEMNERP
Sbjct: 181 GMRVKTEPMDADDSNNCTGQNEHQRENSGHRRDQIIEKDAALCVLIDEMNERP 233


>gi|4758064 mediator complex subunit 7 [Homo sapiens]
          Length = 233

 Score =  477 bits (1227), Expect = e-135
 Identities = 233/233 (100%), Positives = 233/233 (100%)

Query: 1   MGEPQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCDDLIIRPLE 60
           MGEPQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCDDLIIRPLE
Sbjct: 1   MGEPQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCDDLIIRPLE 60

Query: 61  SQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVH 120
           SQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVH
Sbjct: 61  SQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVH 120

Query: 121 HLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASLPDDLPHSEA 180
           HLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASLPDDLPHSEA
Sbjct: 121 HLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASLPDDLPHSEA 180

Query: 181 GMRVKTEPMDADDSNNCTGQNEHQRENSGHRRDQIIEKDAALCVLIDEMNERP 233
           GMRVKTEPMDADDSNNCTGQNEHQRENSGHRRDQIIEKDAALCVLIDEMNERP
Sbjct: 181 GMRVKTEPMDADDSNNCTGQNEHQRENSGHRRDQIIEKDAALCVLIDEMNERP 233


>gi|4758316 ets variant gene 5 (ets-related molecule) [Homo sapiens]
          Length = 510

 Score = 31.6 bits (70), Expect = 0.61
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 1   MGEPQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPP 37
           M EP  V A PPPP  + +EY D   + G+   P PP
Sbjct: 247 MSEPI-VPAAPPPPQGFKQEYHDPLYEHGVPGMPGPP 282


>gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens]
          Length = 1194

 Score = 31.6 bits (70), Expect = 0.61
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 28/145 (19%)

Query: 98  RSPGSIKRE-EKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKH 156
           +SPG +  E E L+ LK LF H H  ++E    + RE LR+ +E     R+         
Sbjct: 141 QSPGGVSSEVEVLKALKSLFEH-HKALDE----KVRERLRMALE-----RVAV------- 183

Query: 157 LERVIEMIQNCLASLPDDLPHSEAGMRVKTEPMDAD----------DSNNCTGQNEHQRE 206
           LE  +E+      +L + L    +G+    +  D            DSN  T + E   E
Sbjct: 184 LEEELELSNQETLNLREQLSRRRSGLEEPGKDGDGQTLANGLGPGGDSNRRTAELEEALE 243

Query: 207 NSGHRRDQIIEKDAALCVLIDEMNE 231
                  Q+ E+ A LC  + ++ E
Sbjct: 244 RQRAEVCQLRERLAVLCRQMSQLEE 268


>gi|116734681 socius isoform 1 [Homo sapiens]
          Length = 487

 Score = 31.2 bits (69), Expect = 0.79
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 23/121 (19%)

Query: 91  DLLDILIRSPGSIKREEKLEDLKLL-----FVHVHHLINEYRPHQARETLRVMMEVQKRQ 145
           +L+  + R    ++++ K +  ++L        +  L+   RPH A  TL         Q
Sbjct: 41  ELMAFMTRKLWDLEQQVKAQTDEILSKDQKIAALEDLVQTLRPHPAEATL---------Q 91

Query: 146 RLETAERFQKHLERVIEMIQNCLASLPDDLPHSEAGMRVKTEPMDADDSNNCTGQNEHQR 205
           R E  E     L+R +  ++  L         S+ G++   EPMD +DS + T     +R
Sbjct: 92  RQEELETMCVQLQRQVREMERFL---------SDYGLQWVGEPMDQEDSESKTVSEHGER 142

Query: 206 E 206
           +
Sbjct: 143 D 143


>gi|116734679 socius isoform 2 [Homo sapiens]
          Length = 520

 Score = 31.2 bits (69), Expect = 0.79
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 23/121 (19%)

Query: 91  DLLDILIRSPGSIKREEKLEDLKLL-----FVHVHHLINEYRPHQARETLRVMMEVQKRQ 145
           +L+  + R    ++++ K +  ++L        +  L+   RPH A  TL         Q
Sbjct: 74  ELMAFMTRKLWDLEQQVKAQTDEILSKDQKIAALEDLVQTLRPHPAEATL---------Q 124

Query: 146 RLETAERFQKHLERVIEMIQNCLASLPDDLPHSEAGMRVKTEPMDADDSNNCTGQNEHQR 205
           R E  E     L+R +  ++  L         S+ G++   EPMD +DS + T     +R
Sbjct: 125 RQEELETMCVQLQRQVREMERFL---------SDYGLQWVGEPMDQEDSESKTVSEHGER 175

Query: 206 E 206
           +
Sbjct: 176 D 176


>gi|38016202 SATB homeobox 2 [Homo sapiens]
          Length = 733

 Score = 31.2 bits (69), Expect = 0.79
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 5   QQVSALPPPPMQYIKEYTDENIQEGL-----APKPPPPIKDS 41
           Q V  LPP P+Q +     +  +E       AP PPPP +DS
Sbjct: 569 QHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDS 610


>gi|167466160 chloride channel 7 isoform b [Homo sapiens]
          Length = 781

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 172 PDDLPHSEAGMRVKTEPMDADDSNNCTGQNEHQRENSGHRRDQIIE-KDAALCVLI 226
           P ++PH+E  + +K E +D D+S N     E +R N  H   + +E K   +C LI
Sbjct: 56  PKEIPHNEKLLSLKYESLDYDNSENQLFLEEERRIN--HTAFRTVEIKRWVICALI 109


>gi|14149607 chloride channel 7 isoform a [Homo sapiens]
          Length = 805

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 172 PDDLPHSEAGMRVKTEPMDADDSNNCTGQNEHQRENSGHRRDQIIE-KDAALCVLI 226
           P ++PH+E  + +K E +D D+S N     E +R N  H   + +E K   +C LI
Sbjct: 80  PKEIPHNEKLLSLKYESLDYDNSENQLFLEEERRIN--HTAFRTVEIKRWVICALI 133


>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
          Length = 1411

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 21/164 (12%)

Query: 60   ESQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHV 119
            E   +  +  ++   +KE+ KLN  +  + L+          SIK    L+D K L +  
Sbjct: 1122 EKSKLAEIEEIKCRQEKEITKLNEELKSHKLE----------SIKEITNLKDAKQLLIQ- 1170

Query: 120  HHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASLPDDLPHSE 179
                 +       ++L+  +E +KR +    ++ +K  E + +      A L  ++   E
Sbjct: 1171 ----QKLELQGKADSLKAAVEQEKRNQQILKDQVKKEEEELKKEFIEKEAKLHSEIKEKE 1226

Query: 180  AGMRVKTEPMDADDSNNCTGQNEH-----QRENSGHRRDQIIEK 218
             GM+ K E  +A  +   T  NE+     +   S  RR   +EK
Sbjct: 1227 VGMK-KHEENEAKLTMQITALNENLGTVKKEWQSSQRRVSELEK 1269


>gi|58530845 zyxin [Homo sapiens]
          Length = 572

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 9   ALPPPPMQYIKEYTDENIQEGLAPKPPPP 37
           A PPPP    + +    ++E + P PPPP
Sbjct: 92  AFPPPPPPIEESFPPAPLEEEIFPSPPPP 120



 Score = 29.6 bits (65), Expect = 2.3
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 4   PQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSY 42
           P +   LPPPP+    +   E    G  P PPPPI++S+
Sbjct: 67  PPEDFPLPPPPLAGDGDDA-EGALGGAFPPPPPPIEESF 104


>gi|4508047 zyxin [Homo sapiens]
          Length = 572

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 9   ALPPPPMQYIKEYTDENIQEGLAPKPPPP 37
           A PPPP    + +    ++E + P PPPP
Sbjct: 92  AFPPPPPPIEESFPPAPLEEEIFPSPPPP 120



 Score = 29.6 bits (65), Expect = 2.3
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 4   PQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSY 42
           P +   LPPPP+    +   E    G  P PPPPI++S+
Sbjct: 67  PPEDFPLPPPPLAGDGDDA-EGALGGAFPPPPPPIEESF 104


>gi|150010604 kinesin family member 4B [Homo sapiens]
          Length = 1234

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 7/121 (5%)

Query: 47  NQFQCDDLIIRPLESQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIKRE 106
           N     + ++R + +Q   +L P+QF ++  ++ L + + IN     + L+R    ++  
Sbjct: 531 NALALKEALVRKM-TQNDNQLQPIQFQYQDNIKNLELEV-INLQKEKEELVR---ELQTA 585

Query: 107 EKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRL-ETAERFQKHLERVIEMIQ 165
           +K  +   L  H H L+ E    Q  +  + + E  K  +L E+ ER    L + I M++
Sbjct: 586 KKNVNQAKLSEHRHKLLQELE-GQIADLKKKLNEQSKLLKLKESTERTVSKLNQEIWMMK 644

Query: 166 N 166
           N
Sbjct: 645 N 645


>gi|31317228 early growth response 3 [Homo sapiens]
          Length = 387

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)

Query: 3   EPQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPI 38
           +P +V+  P  P++ IK + D+ I  G    P PP+
Sbjct: 216 DPIRVNPPPITPLETIKAFKDKQIHPGFGSLPQPPL 251


>gi|54792138 helicase with zinc finger domain [Homo sapiens]
          Length = 1942

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 4    PQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCDDLIIRPLESQG 63
            P+Q + +PP P Q +++ +  N Q     +PPP +  +Y    N    +  +    +S  
Sbjct: 1388 PEQPNQIPPQPNQVVQQQSQLNQQ---PQQPPPQLSPAYQAGPNNAFFNSAVAHRPQSPP 1444

Query: 64   IERLHPMQ 71
             E + P Q
Sbjct: 1445 AEAVIPEQ 1452


>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
          Length = 1317

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 12/109 (11%)

Query: 64  IERLHPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVHHLI 123
           IE +   Q   K EL ++   +     +   + ++    I+++E  E LK    H+ + +
Sbjct: 616 IEEMEEKQKSDKAELERMQQEVETQRKETEIVQLQ----IRKQE--ESLKRRSFHIENKL 669

Query: 124 NEYRPHQAR---ETLRVMMEVQ---KRQRLETAERFQKHLERVIEMIQN 166
            +    + +   E LR   E++   KRQ  ET  R Q+ L+R+ E+  N
Sbjct: 670 KDLLAEKEKFEEERLREQQEIELQKKRQEEETFLRVQEELQRLKELNNN 718


>gi|40538794 coiled-coil domain containing 21 [Homo sapiens]
          Length = 762

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 32/159 (20%), Positives = 66/159 (41%), Gaps = 23/159 (14%)

Query: 35  PPPIKDSYMMFGNQFQCDDLIIRPLESQGIERLHPMQFDHKKELRKLNMSILINFLDLLD 94
           P P  D  ++   + Q ++  +R   +Q  E L   + D +K+L    + + +    L  
Sbjct: 373 PAPFGDVCLLRLQELQRENTFLRAQFAQKTEALSREKIDLEKKLSASEVEVQLIRESLKV 432

Query: 95  ILIRSPGSIKREEKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQ 154
            L +    +K++E  E +K    H+++L  + +    +         +K+QR+ET ER+ 
Sbjct: 433 ALQKHSEEVKKQE--ERVKGRDKHINNLKKKCQKESEQNR-------EKQQRIETLERY- 482

Query: 155 KHLERVIEMIQNCLASLPDDLPHSEAGMRVKTEPMDADD 193
                        LA LP    H +   ++K   + + +
Sbjct: 483 -------------LADLPTLEDHQKQSQQLKDSELKSTE 508


>gi|66954681 PRAME family member 13 [Homo sapiens]
          Length = 474

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 10/106 (9%)

Query: 76  KELRKLNMSILINFLDLLDILIRSPGSIKRE-----EKLEDL-KLLFVHVHHLI--NEYR 127
           K LRK    I +N +  L+I   S   + R+     +++++L KL+F   HH +  NE  
Sbjct: 193 KHLRKSLKIIYLNSIQQLEIRNMSWPRLIRKLRCYLKEMKNLRKLVFSRCHHSMSDNELE 252

Query: 128 PHQARETLRVMMEVQKRQ--RLETAERFQKHLERVIEMIQNCLASL 171
                +   V + ++  Q  +++    F  HLE++I  +QN L +L
Sbjct: 253 GRLVTKFSSVFLRLEHLQLLKIKLITFFSGHLEQLIRCLQNPLENL 298


>gi|5579478 mitogen-activated protein kinase kinase 1 [Homo sapiens]
          Length = 393

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 20/105 (19%)

Query: 29  GLAPKPPPPIKDSYMMFGNQFQCDDLII--------RPLESQGIERLHPM------QFDH 74
           G  P PPP  K+  +MFG Q + D            RPL S G++   PM       +  
Sbjct: 259 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 318

Query: 75  KKELRKLNMSIL-INFLDLLDILIRSPGSIKREEKLEDLKLLFVH 118
            +   KL   +  + F D ++  +     IK   +  DLK L VH
Sbjct: 319 NEPPPKLPSGVFSLEFQDFVNKCL-----IKNPAERADLKQLMVH 358


>gi|75677353 AAA-ATPase  TOB3 [Homo sapiens]
          Length = 648

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 50/229 (21%), Positives = 87/229 (37%), Gaps = 45/229 (19%)

Query: 4   PQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCDDLIIRPLESQG 63
           P+   A PPPP+   +   +     GL  +P P  KD +  F              +  G
Sbjct: 11  PKGEGAGPPPPLPPAQPGAEGGGDRGLGDRPAP--KDKWSNF--------------DPTG 54

Query: 64  IERL--HPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIKR-EEKLEDLKLLFVHVH 120
           +ER      + +H +  ++   ++ +  +    + +     +K  E  +E LK   +   
Sbjct: 55  LERAAKAARELEHSRYAKE---ALNLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRAQ 111

Query: 121 ------HLINEYRPHQARETLRVMMEVQ------KRQRLETAERFQKHLERV--IEMIQN 166
                  L  E R HQAR   +  +  Q      K+Q+L   E  +K  E V   E ++ 
Sbjct: 112 AEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRR 171

Query: 167 CLASLPDDLPHSEAGMRVKTEPMDADDSNNCTGQNEHQRENSGHRRDQI 215
                  +L H    +RV+TE            + + +REN+   R+QI
Sbjct: 172 ATVEREMELRHKNEMLRVETE---------ARARAKAERENADIIREQI 211


>gi|239582714 leucine rich repeat containing 17 isoform 2 [Homo
           sapiens]
          Length = 313

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 7/52 (13%)

Query: 53  DLIIRPLESQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIK 104
           D++   L    I +L P +F+   EL+KLN+S   N ++ +D     PGS++
Sbjct: 269 DIVKLDLSYNKINQLRPKEFEDVHELKKLNLS--SNGIEFID-----PGSLR 313


>gi|238908497 sciellin isoform 2 [Homo sapiens]
          Length = 668

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 46/211 (21%), Positives = 83/211 (39%), Gaps = 35/211 (16%)

Query: 11  PPPPMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCDDLIIRPLE-------SQG 63
           PPPP       T    +E     P PP   S +   NQ + D+  I P +       ++ 
Sbjct: 166 PPPPGYNASSSTGTRRREPGVHPPIPPKPSSPVSSPNQLRQDNRQIHPPKPGVYTETNRS 225

Query: 64  IERLHPMQFDHKKELRKLNMSILINFLDLLDILIR-SPGSIKREEKLEDLKLLFVHVHHL 122
            ER    + D+   L K+N S  +N    LD L R +P   +RE++ + L+ L       
Sbjct: 226 AERNISEELDN---LIKMNKS--LNRNQGLDSLFRANPKVEEREKRAKSLESLI-----Y 275

Query: 123 INEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASLPDDLPHSEAGM 182
           ++       +    +   ++  QR +  E+ +++LE V                 ++   
Sbjct: 276 MSTRTDKDGKGIQSLGSPIKVNQRTDKNEKGRQNLESV-----------------AKVNA 318

Query: 183 RVKTEPMDADDSNNCTGQNEHQRENSGHRRD 213
           R+      ++D +N T  N    EN+  ++D
Sbjct: 319 RMNKTSRRSEDLDNATEVNPKGHENTTGKKD 349


>gi|58331242 formin homology 2 domain containing 3 [Homo sapiens]
          Length = 1439

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 10/41 (24%)

Query: 1   MGEPQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDS 41
           +G  +     PPPP  ++          GL P PPPP+ DS
Sbjct: 838 LGHREAPGPPPPPPPTFL----------GLPPPPPPPLLDS 868


>gi|203098334 Myc-binding protein-associated protein [Homo sapiens]
          Length = 984

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 24  ENIQEGLAPK----PPPPIKDSYMMFGNQFQCDDLIIRPLESQGIERLHPMQFDHKKELR 79
           EN++E    K    P P I++      N  Q DD++   ++ + ++  H  +   K++ R
Sbjct: 65  ENVKEKKRAKGPEQPTPTIQEEPEPVSNVLQGDDILALAIKKEDLKEQHIPRLTEKEDKR 124

Query: 80  KLNMSILINFLDLLD 94
            +    +I  L  +D
Sbjct: 125 VITQKFIIRKLKPMD 139


>gi|122891872 microcephalin [Homo sapiens]
          Length = 835

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 148 ETAERFQKHLERVIEMIQNCLASLPDDLP---HSEAGMRVKTEPMDADDSNNCTGQN--- 201
           E  +RFQK  E++ + +Q    +L DD+P       G  + T  ++ + S++   +    
Sbjct: 122 ENDKRFQKKFEKMAKELQRQKTNLDDDVPILLFESNGSLIYTPTIEINSSHHSAMEKRLQ 181

Query: 202 --EHQRENSGHRRDQIIEK 218
             + +REN      Q+I++
Sbjct: 182 EMKEKRENLSPTSSQMIQQ 200


>gi|153085395 histone deacetylase 4 [Homo sapiens]
          Length = 1084

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 16/91 (17%)

Query: 119 VHHLINEYRPHQARETLRVMMEVQKRQR-------LETAERFQKHLERVIEMIQNCLASL 171
           + HL+ + +  Q  E  +   + Q+ Q         E A + + H E   E ++   A L
Sbjct: 477 LQHLVIQQQHQQFLEKHKQQFQQQQLQMNKIIPKPSEPARQPESHPEETEEELREHQALL 536

Query: 172 P----DDLP-----HSEAGMRVKTEPMDADD 193
                D LP     H++AG++VK EP+++D+
Sbjct: 537 DEPYLDRLPGQKEAHAQAGVQVKQEPIESDE 567


>gi|113722120 G protein-coupled receptor 98 precursor [Homo sapiens]
          Length = 6306

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 19/103 (18%)

Query: 117  VHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASLPDDLP 176
            +HV +   E   +  +ET+ +M E  K    E                   ++ LPDDLP
Sbjct: 3824 LHVDNQATENEDYVLQETIIIMKENIKEAHAE-------------------VSILPDDLP 3864

Query: 177  HSEAGMRVKTEPMDADDSNNCTGQNEHQRENSGHRRDQIIEKD 219
              E G  V    ++  +S+  TGQ   +R         I E D
Sbjct: 3865 ELEEGFIVTITEVNLVNSDFSTGQPSVRRPGMEIAEIMIEEND 3907


>gi|12738831 PRAME family member 1 [Homo sapiens]
          Length = 474

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 10/106 (9%)

Query: 76  KELRKLNMSILINFLDLLDILIRSPGSIKRE-----EKLEDL-KLLFVHVHHLI--NEYR 127
           K LRK    I +N +  L+I   S   + R+     +++++L KL+F   HH    NE +
Sbjct: 193 KYLRKSLKIIYLNSIQELEIRNMSWPRLIRKLRCYLKEMKNLRKLVFSRCHHYTSDNELQ 252

Query: 128 PHQARETLRVMMEVQKRQ--RLETAERFQKHLERVIEMIQNCLASL 171
                +   V + ++  Q  +++    F  HLE++I  +QN L +L
Sbjct: 253 GRLVAKFSSVFLRLEHLQLLKIKLITFFSGHLEQLIRCLQNPLENL 298


>gi|157266266 WD repeat domain 86 [Homo sapiens]
          Length = 376

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 31  APKPPPPIKDSYMMFGNQFQCDDLIIRP 58
           AP+PPPP++    +F N+  C    ++P
Sbjct: 348 APRPPPPMRSLSRLFSNKVGCAAAPLQP 375


>gi|116174778 centrosome spindle pole associated protein 1 isoform b
           [Homo sapiens]
          Length = 1221

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 51/250 (20%), Positives = 89/250 (35%), Gaps = 47/250 (18%)

Query: 4   PQQVSALPPPPMQYIKEYTDENIQEGL------------APKPPPPI------------K 39
           P    ++PP P  +     +E+++ GL            AP PPPP+             
Sbjct: 457 PLSAPSVPPIPSVHPVPSQNEDLRSGLSSALGEMVSPRIAPLPPPPLLPPLATNYRTPYD 516

Query: 40  DSYMMFGNQFQCDDLIIRPLESQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRS 99
           D+Y  +G++   D  +       G+  + P  +       +L   + +N +   ++ I S
Sbjct: 517 DAYYFYGSRNTFDPSL--AYYGSGMMGVQPAAYVSAPVTHQLAQPV-VNTVGQNELKITS 573

Query: 100 PGSIKREEKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLER 159
              I                  LI E +P  ++++L+   E  ++Q  E  ER +K  E 
Sbjct: 574 DQVIN---------------SGLIFEDKPKPSKQSLQSYQEALQQQIREREERRKKEREE 618

Query: 160 VIEMIQNCLASLPDDLPHSEAGMRVKTEPMDADDSNNCTGQNEHQREN--SGHRRDQIIE 217
             E      A +    P  + G      P+     N  T  N   R+N  + H  D    
Sbjct: 619 KEEYEAKLEAEMRTYNPWGKGG---GGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTY 675

Query: 218 KDAALCVLID 227
           +D    V +D
Sbjct: 676 EDKRAVVSLD 685


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,394,298
Number of Sequences: 37866
Number of extensions: 519499
Number of successful extensions: 2179
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 2150
Number of HSP's gapped (non-prelim): 69
length of query: 233
length of database: 18,247,518
effective HSP length: 99
effective length of query: 134
effective length of database: 14,498,784
effective search space: 1942837056
effective search space used: 1942837056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.