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Search of human proteins with 154689866
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154689866 hypothetical protein LOC9778 [Homo sapiens]
(1395 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154689866 hypothetical protein LOC9778 [Homo sapiens] 2830 0.0
gi|154689751 hypothetical protein LOC9778 [Homo sapiens] 2830 0.0
gi|40068059 CBF1 interacting corepressor [Homo sapiens] 57 2e-07
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 52 3e-06
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 50 1e-05
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 48 6e-05
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 47 1e-04
gi|104526627 triadin [Homo sapiens] 46 3e-04
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 45 5e-04
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 45 5e-04
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 45 5e-04
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 45 5e-04
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 45 6e-04
gi|56090620 NFKB activating protein-like [Homo sapiens] 44 8e-04
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 44 0.001
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 44 0.001
gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo ... 43 0.002
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] 43 0.002
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] 43 0.002
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 43 0.002
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 42 0.003
gi|55749769 CWC22 spliceosome-associated protein homolog [Homo s... 42 0.003
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 42 0.004
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 42 0.005
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 42 0.005
gi|118421089 chromodomain helicase DNA binding protein 2 isoform... 42 0.005
gi|110611184 chromodomain helicase DNA binding protein 2 isoform... 42 0.005
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 41 0.007
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 41 0.007
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 41 0.009
>gi|154689866 hypothetical protein LOC9778 [Homo sapiens]
Length = 1395
Score = 2830 bits (7335), Expect = 0.0
Identities = 1395/1395 (100%), Positives = 1395/1395 (100%)
Query: 1 MYPICTVVVDGLPSESSSSSYPGPVSVSEMSLLHALGPVQTWLGQELEKCGIDAMIYTRY 60
MYPICTVVVDGLPSESSSSSYPGPVSVSEMSLLHALGPVQTWLGQELEKCGIDAMIYTRY
Sbjct: 1 MYPICTVVVDGLPSESSSSSYPGPVSVSEMSLLHALGPVQTWLGQELEKCGIDAMIYTRY 60
Query: 61 VLSLLLHDSYDYDLQEQENDIFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSA 120
VLSLLLHDSYDYDLQEQENDIFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSA
Sbjct: 61 VLSLLLHDSYDYDLQEQENDIFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSA 120
Query: 121 SDESSGIETLVEELCSRLKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPP 180
SDESSGIETLVEELCSRLKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPP
Sbjct: 121 SDESSGIETLVEELCSRLKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPP 180
Query: 181 LSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVP 240
LSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVP
Sbjct: 181 LSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVP 240
Query: 241 TTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSS 300
TTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSS
Sbjct: 241 TTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSS 300
Query: 301 GNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVK 360
GNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVK
Sbjct: 301 GNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVK 360
Query: 361 QLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKDTEYKEEPLWYTEPIAEYFVPLSRKSKL 420
QLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKDTEYKEEPLWYTEPIAEYFVPLSRKSKL
Sbjct: 361 QLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKDTEYKEEPLWYTEPIAEYFVPLSRKSKL 420
Query: 421 ETTYRNRQDTSDLTSEAVEELSESVHGLCISNNNLHKTYLAAGTFIDGHFVEMPAVINED 480
ETTYRNRQDTSDLTSEAVEELSESVHGLCISNNNLHKTYLAAGTFIDGHFVEMPAVINED
Sbjct: 421 ETTYRNRQDTSDLTSEAVEELSESVHGLCISNNNLHKTYLAAGTFIDGHFVEMPAVINED 480
Query: 481 IDLTGTSLCSLPEDNKYLDDIHLSELTHFYEVDIDQSMLDPGASETMQGESRILNMIRQK 540
IDLTGTSLCSLPEDNKYLDDIHLSELTHFYEVDIDQSMLDPGASETMQGESRILNMIRQK
Sbjct: 481 IDLTGTSLCSLPEDNKYLDDIHLSELTHFYEVDIDQSMLDPGASETMQGESRILNMIRQK 540
Query: 541 SKENTDFEAECCIVLDGMELQGERAIWTDSTSSVGAEGLFLQDLGNLAQFWECCSSSSGD 600
SKENTDFEAECCIVLDGMELQGERAIWTDSTSSVGAEGLFLQDLGNLAQFWECCSSSSGD
Sbjct: 541 SKENTDFEAECCIVLDGMELQGERAIWTDSTSSVGAEGLFLQDLGNLAQFWECCSSSSGD 600
Query: 601 ADGESFGGDSPVRLSPILDSTVLNSHLLAGNQELFSDINEGSGINSCFSVFEVQCSNSVL 660
ADGESFGGDSPVRLSPILDSTVLNSHLLAGNQELFSDINEGSGINSCFSVFEVQCSNSVL
Sbjct: 601 ADGESFGGDSPVRLSPILDSTVLNSHLLAGNQELFSDINEGSGINSCFSVFEVQCSNSVL 660
Query: 661 PFSFETLNLGNENTDSSANMLGKTQSRLLIWTKNSAFEENEHCSNLSTRTCSPWSHSEET 720
PFSFETLNLGNENTDSSANMLGKTQSRLLIWTKNSAFEENEHCSNLSTRTCSPWSHSEET
Sbjct: 661 PFSFETLNLGNENTDSSANMLGKTQSRLLIWTKNSAFEENEHCSNLSTRTCSPWSHSEET 720
Query: 721 RSDNETLNIQFEESTQFNAEDINYVVPRVSSNYVDEELLDFLQDETCQQNSRTLGEIPTL 780
RSDNETLNIQFEESTQFNAEDINYVVPRVSSNYVDEELLDFLQDETCQQNSRTLGEIPTL
Sbjct: 721 RSDNETLNIQFEESTQFNAEDINYVVPRVSSNYVDEELLDFLQDETCQQNSRTLGEIPTL 780
Query: 781 VFKKTSKLESVCGIQLEQKTENKNFETTQVCNESPHGDGYSSGVIKDIWTKMADTNSVAT 840
VFKKTSKLESVCGIQLEQKTENKNFETTQVCNESPHGDGYSSGVIKDIWTKMADTNSVAT
Sbjct: 781 VFKKTSKLESVCGIQLEQKTENKNFETTQVCNESPHGDGYSSGVIKDIWTKMADTNSVAT 840
Query: 841 VEIERTDAELFSADVNNYCCCLDAEAELETLQEPDKAVRRSEYHLWEGQKESLEKRAFAS 900
VEIERTDAELFSADVNNYCCCLDAEAELETLQEPDKAVRRSEYHLWEGQKESLEKRAFAS
Sbjct: 841 VEIERTDAELFSADVNNYCCCLDAEAELETLQEPDKAVRRSEYHLWEGQKESLEKRAFAS 900
Query: 901 SELSNVDGGDYTTPSKPWDVAQDKENTFILGGVYGELKTFNSDGEWAVVPPSHTKGSLLQ 960
SELSNVDGGDYTTPSKPWDVAQDKENTFILGGVYGELKTFNSDGEWAVVPPSHTKGSLLQ
Sbjct: 901 SELSNVDGGDYTTPSKPWDVAQDKENTFILGGVYGELKTFNSDGEWAVVPPSHTKGSLLQ 960
Query: 961 CAASDVVTIAGTDVFMTPGNSFAPGHRQLWKPFVSFEQNDQPKSGENGLNKGFSFIFHED 1020
CAASDVVTIAGTDVFMTPGNSFAPGHRQLWKPFVSFEQNDQPKSGENGLNKGFSFIFHED
Sbjct: 961 CAASDVVTIAGTDVFMTPGNSFAPGHRQLWKPFVSFEQNDQPKSGENGLNKGFSFIFHED 1020
Query: 1021 LLGACGNFQVEDPGLEYSFSSFDLSNPFSQVLHVECSFEPEGIASFSPSFKPKSILCSDS 1080
LLGACGNFQVEDPGLEYSFSSFDLSNPFSQVLHVECSFEPEGIASFSPSFKPKSILCSDS
Sbjct: 1021 LLGACGNFQVEDPGLEYSFSSFDLSNPFSQVLHVECSFEPEGIASFSPSFKPKSILCSDS 1080
Query: 1081 DSEVFHPRICGVDRTQYRAIRISPRTHFRPISASELSPGGGSESEFESEKDEANIPIPSQ 1140
DSEVFHPRICGVDRTQYRAIRISPRTHFRPISASELSPGGGSESEFESEKDEANIPIPSQ
Sbjct: 1081 DSEVFHPRICGVDRTQYRAIRISPRTHFRPISASELSPGGGSESEFESEKDEANIPIPSQ 1140
Query: 1141 VDIFEDPQADLKPLEEDAEKEGHYYGKSELESGKFLPRLKKSGMEKSAQTSLDSQEESTG 1200
VDIFEDPQADLKPLEEDAEKEGHYYGKSELESGKFLPRLKKSGMEKSAQTSLDSQEESTG
Sbjct: 1141 VDIFEDPQADLKPLEEDAEKEGHYYGKSELESGKFLPRLKKSGMEKSAQTSLDSQEESTG 1200
Query: 1201 ILSVGKQNQCLECSMNESLEIDLESSEANCKIMAQCEEEINNFCGCKAGCQFPAYEDNPV 1260
ILSVGKQNQCLECSMNESLEIDLESSEANCKIMAQCEEEINNFCGCKAGCQFPAYEDNPV
Sbjct: 1201 ILSVGKQNQCLECSMNESLEIDLESSEANCKIMAQCEEEINNFCGCKAGCQFPAYEDNPV 1260
Query: 1261 SSGQLEEFPVLNTDIQGMNRSQEKQTWWEKALYSPLFPASECEECYTNAKGESGLEEYPD 1320
SSGQLEEFPVLNTDIQGMNRSQEKQTWWEKALYSPLFPASECEECYTNAKGESGLEEYPD
Sbjct: 1261 SSGQLEEFPVLNTDIQGMNRSQEKQTWWEKALYSPLFPASECEECYTNAKGESGLEEYPD 1320
Query: 1321 AKETPSNEERLLDFNRVSSVYEARCTGERDSGAKSDGFRGKMCSSASSTSEETGSEGGGE 1380
AKETPSNEERLLDFNRVSSVYEARCTGERDSGAKSDGFRGKMCSSASSTSEETGSEGGGE
Sbjct: 1321 AKETPSNEERLLDFNRVSSVYEARCTGERDSGAKSDGFRGKMCSSASSTSEETGSEGGGE 1380
Query: 1381 WVGPSEEELFSRTHL 1395
WVGPSEEELFSRTHL
Sbjct: 1381 WVGPSEEELFSRTHL 1395
>gi|154689751 hypothetical protein LOC9778 [Homo sapiens]
Length = 1395
Score = 2830 bits (7335), Expect = 0.0
Identities = 1395/1395 (100%), Positives = 1395/1395 (100%)
Query: 1 MYPICTVVVDGLPSESSSSSYPGPVSVSEMSLLHALGPVQTWLGQELEKCGIDAMIYTRY 60
MYPICTVVVDGLPSESSSSSYPGPVSVSEMSLLHALGPVQTWLGQELEKCGIDAMIYTRY
Sbjct: 1 MYPICTVVVDGLPSESSSSSYPGPVSVSEMSLLHALGPVQTWLGQELEKCGIDAMIYTRY 60
Query: 61 VLSLLLHDSYDYDLQEQENDIFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSA 120
VLSLLLHDSYDYDLQEQENDIFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSA
Sbjct: 61 VLSLLLHDSYDYDLQEQENDIFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSA 120
Query: 121 SDESSGIETLVEELCSRLKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPP 180
SDESSGIETLVEELCSRLKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPP
Sbjct: 121 SDESSGIETLVEELCSRLKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPP 180
Query: 181 LSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVP 240
LSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVP
Sbjct: 181 LSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVP 240
Query: 241 TTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSS 300
TTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSS
Sbjct: 241 TTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSS 300
Query: 301 GNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVK 360
GNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVK
Sbjct: 301 GNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVK 360
Query: 361 QLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKDTEYKEEPLWYTEPIAEYFVPLSRKSKL 420
QLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKDTEYKEEPLWYTEPIAEYFVPLSRKSKL
Sbjct: 361 QLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKDTEYKEEPLWYTEPIAEYFVPLSRKSKL 420
Query: 421 ETTYRNRQDTSDLTSEAVEELSESVHGLCISNNNLHKTYLAAGTFIDGHFVEMPAVINED 480
ETTYRNRQDTSDLTSEAVEELSESVHGLCISNNNLHKTYLAAGTFIDGHFVEMPAVINED
Sbjct: 421 ETTYRNRQDTSDLTSEAVEELSESVHGLCISNNNLHKTYLAAGTFIDGHFVEMPAVINED 480
Query: 481 IDLTGTSLCSLPEDNKYLDDIHLSELTHFYEVDIDQSMLDPGASETMQGESRILNMIRQK 540
IDLTGTSLCSLPEDNKYLDDIHLSELTHFYEVDIDQSMLDPGASETMQGESRILNMIRQK
Sbjct: 481 IDLTGTSLCSLPEDNKYLDDIHLSELTHFYEVDIDQSMLDPGASETMQGESRILNMIRQK 540
Query: 541 SKENTDFEAECCIVLDGMELQGERAIWTDSTSSVGAEGLFLQDLGNLAQFWECCSSSSGD 600
SKENTDFEAECCIVLDGMELQGERAIWTDSTSSVGAEGLFLQDLGNLAQFWECCSSSSGD
Sbjct: 541 SKENTDFEAECCIVLDGMELQGERAIWTDSTSSVGAEGLFLQDLGNLAQFWECCSSSSGD 600
Query: 601 ADGESFGGDSPVRLSPILDSTVLNSHLLAGNQELFSDINEGSGINSCFSVFEVQCSNSVL 660
ADGESFGGDSPVRLSPILDSTVLNSHLLAGNQELFSDINEGSGINSCFSVFEVQCSNSVL
Sbjct: 601 ADGESFGGDSPVRLSPILDSTVLNSHLLAGNQELFSDINEGSGINSCFSVFEVQCSNSVL 660
Query: 661 PFSFETLNLGNENTDSSANMLGKTQSRLLIWTKNSAFEENEHCSNLSTRTCSPWSHSEET 720
PFSFETLNLGNENTDSSANMLGKTQSRLLIWTKNSAFEENEHCSNLSTRTCSPWSHSEET
Sbjct: 661 PFSFETLNLGNENTDSSANMLGKTQSRLLIWTKNSAFEENEHCSNLSTRTCSPWSHSEET 720
Query: 721 RSDNETLNIQFEESTQFNAEDINYVVPRVSSNYVDEELLDFLQDETCQQNSRTLGEIPTL 780
RSDNETLNIQFEESTQFNAEDINYVVPRVSSNYVDEELLDFLQDETCQQNSRTLGEIPTL
Sbjct: 721 RSDNETLNIQFEESTQFNAEDINYVVPRVSSNYVDEELLDFLQDETCQQNSRTLGEIPTL 780
Query: 781 VFKKTSKLESVCGIQLEQKTENKNFETTQVCNESPHGDGYSSGVIKDIWTKMADTNSVAT 840
VFKKTSKLESVCGIQLEQKTENKNFETTQVCNESPHGDGYSSGVIKDIWTKMADTNSVAT
Sbjct: 781 VFKKTSKLESVCGIQLEQKTENKNFETTQVCNESPHGDGYSSGVIKDIWTKMADTNSVAT 840
Query: 841 VEIERTDAELFSADVNNYCCCLDAEAELETLQEPDKAVRRSEYHLWEGQKESLEKRAFAS 900
VEIERTDAELFSADVNNYCCCLDAEAELETLQEPDKAVRRSEYHLWEGQKESLEKRAFAS
Sbjct: 841 VEIERTDAELFSADVNNYCCCLDAEAELETLQEPDKAVRRSEYHLWEGQKESLEKRAFAS 900
Query: 901 SELSNVDGGDYTTPSKPWDVAQDKENTFILGGVYGELKTFNSDGEWAVVPPSHTKGSLLQ 960
SELSNVDGGDYTTPSKPWDVAQDKENTFILGGVYGELKTFNSDGEWAVVPPSHTKGSLLQ
Sbjct: 901 SELSNVDGGDYTTPSKPWDVAQDKENTFILGGVYGELKTFNSDGEWAVVPPSHTKGSLLQ 960
Query: 961 CAASDVVTIAGTDVFMTPGNSFAPGHRQLWKPFVSFEQNDQPKSGENGLNKGFSFIFHED 1020
CAASDVVTIAGTDVFMTPGNSFAPGHRQLWKPFVSFEQNDQPKSGENGLNKGFSFIFHED
Sbjct: 961 CAASDVVTIAGTDVFMTPGNSFAPGHRQLWKPFVSFEQNDQPKSGENGLNKGFSFIFHED 1020
Query: 1021 LLGACGNFQVEDPGLEYSFSSFDLSNPFSQVLHVECSFEPEGIASFSPSFKPKSILCSDS 1080
LLGACGNFQVEDPGLEYSFSSFDLSNPFSQVLHVECSFEPEGIASFSPSFKPKSILCSDS
Sbjct: 1021 LLGACGNFQVEDPGLEYSFSSFDLSNPFSQVLHVECSFEPEGIASFSPSFKPKSILCSDS 1080
Query: 1081 DSEVFHPRICGVDRTQYRAIRISPRTHFRPISASELSPGGGSESEFESEKDEANIPIPSQ 1140
DSEVFHPRICGVDRTQYRAIRISPRTHFRPISASELSPGGGSESEFESEKDEANIPIPSQ
Sbjct: 1081 DSEVFHPRICGVDRTQYRAIRISPRTHFRPISASELSPGGGSESEFESEKDEANIPIPSQ 1140
Query: 1141 VDIFEDPQADLKPLEEDAEKEGHYYGKSELESGKFLPRLKKSGMEKSAQTSLDSQEESTG 1200
VDIFEDPQADLKPLEEDAEKEGHYYGKSELESGKFLPRLKKSGMEKSAQTSLDSQEESTG
Sbjct: 1141 VDIFEDPQADLKPLEEDAEKEGHYYGKSELESGKFLPRLKKSGMEKSAQTSLDSQEESTG 1200
Query: 1201 ILSVGKQNQCLECSMNESLEIDLESSEANCKIMAQCEEEINNFCGCKAGCQFPAYEDNPV 1260
ILSVGKQNQCLECSMNESLEIDLESSEANCKIMAQCEEEINNFCGCKAGCQFPAYEDNPV
Sbjct: 1201 ILSVGKQNQCLECSMNESLEIDLESSEANCKIMAQCEEEINNFCGCKAGCQFPAYEDNPV 1260
Query: 1261 SSGQLEEFPVLNTDIQGMNRSQEKQTWWEKALYSPLFPASECEECYTNAKGESGLEEYPD 1320
SSGQLEEFPVLNTDIQGMNRSQEKQTWWEKALYSPLFPASECEECYTNAKGESGLEEYPD
Sbjct: 1261 SSGQLEEFPVLNTDIQGMNRSQEKQTWWEKALYSPLFPASECEECYTNAKGESGLEEYPD 1320
Query: 1321 AKETPSNEERLLDFNRVSSVYEARCTGERDSGAKSDGFRGKMCSSASSTSEETGSEGGGE 1380
AKETPSNEERLLDFNRVSSVYEARCTGERDSGAKSDGFRGKMCSSASSTSEETGSEGGGE
Sbjct: 1321 AKETPSNEERLLDFNRVSSVYEARCTGERDSGAKSDGFRGKMCSSASSTSEETGSEGGGE 1380
Query: 1381 WVGPSEEELFSRTHL 1395
WVGPSEEELFSRTHL
Sbjct: 1381 WVGPSEEELFSRTHL 1395
>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
Length = 450
Score = 56.6 bits (135), Expect = 2e-07
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 42/266 (15%)
Query: 138 LKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNK 197
LK L +KQ++K+ +KL+ E KD+ + ++ +K +K
Sbjct: 213 LKSLTTKQKQKLLRKLD-----RLEKKKKKKDRKKKKFQKSRSKHKK-----------HK 256
Query: 198 SKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKEN 257
S S SSSSSSS++ S +S + N E ++ +++ + + H + S+ K++ +
Sbjct: 257 SSSSS-SSSSSSSSSTETSESSSESESNNKEKKIQRKKRKKNKCSGHNNSDSEEKDKSKK 315
Query: 258 KFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRH 317
+ + + ++ + K +PR SS S S + + K+ +
Sbjct: 316 RKLHEELSSSH-------HNREKAKEKPRFLKHESSREDSKWSHSDSDKKS-----RTHK 363
Query: 318 KAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQ--LCKRGKR-PLKEIG 374
+ E R + + G SR HG R + S S S GS KQ KR +R P +E
Sbjct: 364 HSPEKRGSERKEGSSR---SHG----REERSRRSRSRSPGSYKQRETRKRAQRNPGEEQS 416
Query: 375 RKDPGSTEGKDLYMENRKDTEYKEEP 400
R++ + G DLY R + Y+E P
Sbjct: 417 RRNDSRSHGTDLY---RGEKMYREHP 439
Score = 35.8 bits (81), Expect = 0.30
Identities = 40/179 (22%), Positives = 69/179 (38%), Gaps = 13/179 (7%)
Query: 227 SESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPR 286
S+ V E + + +K K + K ++K KK+ K K +
Sbjct: 196 SQEYVASEGEEDPEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKDRKKKKFQKSRSKHKKH 255
Query: 287 SWSSGSSEAGSSSSGNQ-----GELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEK 341
SS SS + SSSS + E +++ K K++ K R+ G N S + +
Sbjct: 256 KSSSSSSSSSSSSSSTETSESSSESESNNKEKKIQRKKRKKNKCSGHNNSD--SEEKDKS 313
Query: 342 AERNIHTGSSSSSSSGSVKQLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKDTEYKEEP 400
+R +H SSS + ++ K R LK ++ D ++K +K P
Sbjct: 314 KKRKLHEELSSSHHN---REKAKEKPRFLKHESSREDSKWSHSD---SDKKSRTHKHSP 366
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 52.4 bits (124), Expect = 3e-06
Identities = 58/274 (21%), Positives = 105/274 (38%), Gaps = 32/274 (11%)
Query: 140 DLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSK 199
D++ + EEK K+ E P P A+ P ++ Q+++ ++ P L +P E +
Sbjct: 453 DMEKESEEKEEKESEPQPEPVAQPQPQSQPQLQLQSQSQPVLQSQPPSQPEDL------- 505
Query: 200 VCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPT----TVHEKTQSKSK--- 252
S + P + + + V + +EVP TVH +++SK+K
Sbjct: 506 -----SLAVLQPTPQVTQEQGHLLPERKDFPVESVKLTEVPVEPVLTVHPESKSKTKTRS 560
Query: 253 ----------NEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGN 302
++ ++ S+ + + G RS SS SS SSS +
Sbjct: 561 RSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRD 620
Query: 303 QGELKASMKYVKVRHKAR-EIRNKKGRNG--QSRLSLKHGEKAERNIHTGSSSSSSSGSV 359
+S + R + R R++K R + R E++ ++ GSS +
Sbjct: 621 SSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKD 680
Query: 360 KQLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKD 393
K KR + E R S+ + +RKD
Sbjct: 681 KNSRSDRKRSISESSRSGKRSSRSERDRKSDRKD 714
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 50.4 bits (119), Expect = 1e-05
Identities = 62/313 (19%), Positives = 119/313 (38%), Gaps = 29/313 (9%)
Query: 95 KSKKKCSDLTLEEMKKQAAVQCLRSASDESSGIETLVEELCSRLKDLQSKQEEKIHKK-- 152
KS++K +E+ +K+ + + ++E+ E + EE K+ + K+EE ++
Sbjct: 439 KSEEKIK--VVEKSEKETVI--VEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEA 494
Query: 153 -----------LEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSKVC 201
E + SPE E P K++ + EA P E+ E+ +
Sbjct: 495 EGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPA 554
Query: 202 SYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSN 261
+ S P + SP + S + E + K+ K+K+ + + +
Sbjct: 555 KEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKS 614
Query: 262 GTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKAR- 320
+ P K++ + E K ++ S EA S E + + K + +
Sbjct: 615 PAEAKSPV--KEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKA 672
Query: 321 EIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGS-VKQLCK---RGKRPLKEIGR- 375
E ++ + + K EKA+ + + S + S VK+ K + K P+KE +
Sbjct: 673 EAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKT 732
Query: 376 ----KDPGSTEGK 384
K P E K
Sbjct: 733 PEKAKSPVKEEAK 745
Score = 35.4 bits (80), Expect = 0.39
Identities = 66/318 (20%), Positives = 111/318 (34%), Gaps = 51/318 (16%)
Query: 87 KGAYKKWGKSKKKCSDLTLEEMKK-QAAVQCLRSASDESSGIETLVEELCSRLKDLQSKQ 145
K K+ KS +K EE K + A ++ + ++ V+E + +S +
Sbjct: 695 KSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKE------EAKSPE 748
Query: 146 EEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSKVCSYSS 205
+ K +K + E PAK++ + FP ++ PV K +V S
Sbjct: 749 KAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPV----------KEEVKSPEK 798
Query: 206 SSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIE 265
+ S P D +P E E+ K+ + P EK Q E K E
Sbjct: 799 AKS-----PLKEDAKAP-----EKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEE---E 845
Query: 266 EKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASM-KYVKVRHKAREIRN 324
+ PA K + + + + P+ EA + E K KV K E +
Sbjct: 846 KAPATPKTEEKKDSKKEEAPK------KEAPKPKVEEKKEPAVEKPKESKVEAKKEEAED 899
Query: 325 KK-----GRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLKEIGRKDPG 379
KK + +++ +K K + + + K P K +K+
Sbjct: 900 KKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDA--------KAKEPSKPAEKKE-A 950
Query: 380 STEGKDLYMENRKDTEYK 397
+ E KD E K E K
Sbjct: 951 APEKKDTKEEKAKKPEEK 968
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 48.1 bits (113), Expect = 6e-05
Identities = 61/252 (24%), Positives = 97/252 (38%), Gaps = 22/252 (8%)
Query: 136 SRLKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVW 195
S +D S +EE+ K ++ P P + + PP+ + PP +K V Q+ +
Sbjct: 265 SSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPP--KKAVEKQQPVESS 322
Query: 196 NKSKVCSYSSSSSSSTAPP---ASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSK 252
S S SSS P S T+ P +E + + SS+ ++ ++ SK
Sbjct: 323 EDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSD-SSDSDSSEDDEAPSKPA 381
Query: 253 NEKENKFSNGTIEEK-PALYKKQIRHKPEG---KIRPRSWSSGSSEAGSSSSGNQGELKA 308
+N + + K PA+ +P G K+ R S SSE SSSS +
Sbjct: 382 GTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEE----- 436
Query: 309 SMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRG-- 366
K + + K L K + R+ + S SSSS ++ K
Sbjct: 437 -----KTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVK 491
Query: 367 KRPLKEIGRKDP 378
K+P K G P
Sbjct: 492 KKPQKVAGGAAP 503
Score = 40.8 bits (94), Expect = 0.009
Identities = 42/156 (26%), Positives = 60/156 (38%), Gaps = 26/156 (16%)
Query: 206 SSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIE 265
S + AP S D+SS D +S E EKT + +K K + G
Sbjct: 456 SLPAKQAPQGSRDSSSDSDSSSSEEE------------EEKTSKSAVKKKPQKVAGGAAP 503
Query: 266 EKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKAREIRNK 325
KPA KK GK SS SS + SS + +LK R +A +
Sbjct: 504 SKPASAKK-------GKAE----SSNSSSSDDSSEEEEEKLKGK---GSPRPQAPKANGT 549
Query: 326 KGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQ 361
Q+ + K+ E+ E + S SGS+K+
Sbjct: 550 SALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKK 585
Score = 36.6 bits (83), Expect = 0.17
Identities = 90/417 (21%), Positives = 146/417 (35%), Gaps = 69/417 (16%)
Query: 87 KGAYKKWGKSKKKCSDLTLEEMK----KQAAVQCLR----------SASDESSGIETLVE 132
K A KK S + S EE++ K+AAV R AS+ SS E+ +
Sbjct: 76 KKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASESSSSEESSDD 135
Query: 133 ELCSRLKDLQSKQEEKIHKKLEGSPSPEAELSPPAK-----DQVEMYYEAFPPLSEKPVC 187
+ D + ++++ + K ++ P +A +PP K + E PP ++KP
Sbjct: 136 D------DEEDQKKQPVQKGVK--PQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKI 187
Query: 188 LQEIMTVWNK------------------SKVCSYSSSSSSSTAPPASTDTSSPKDCNSES 229
+ K S S SSSSSS + + K +
Sbjct: 188 TPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQ 247
Query: 230 EVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALY-----------KKQIRHK 278
V K T + + S+ + E + ++ KP Y KK + +
Sbjct: 248 VVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQ 307
Query: 279 PEGKIRPRSWSSGSSEAGS--SSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQSRL-- 334
P K + SSE S S S ++ E K K V + + KK S
Sbjct: 308 PPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSD 367
Query: 335 --SLKHGEKAERNIHTGSSSSSSSG--SVKQLCKRGKRPLKEIGRKDPGSTEGKDLYMEN 390
S + E + T +SS+ + K P + +G T D
Sbjct: 368 SDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSE 427
Query: 391 RKDTEYKEEP----LWYTEPIAEYFVPLSRKSKLETTYRNRQDTSDLTSEAVEELSE 443
+ + +EE + T+P A LS +K + +R +SD S + EE E
Sbjct: 428 EESSSSEEEKTKKMVATTKPKATAKAALSLPAK-QAPQGSRDSSSDSDSSSSEEEEE 483
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 47.4 bits (111), Expect = 1e-04
Identities = 54/203 (26%), Positives = 79/203 (38%), Gaps = 19/203 (9%)
Query: 198 SKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKEN 257
SK S S S S S + S S + +S + S + K++SKSK++ E
Sbjct: 216 SKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEE 275
Query: 258 KFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSE--AGSSSSGNQGELK-------- 307
K N KP + RHK + K R RS E GS S G E
Sbjct: 276 KIQNNDNVGKPK-SRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRS 334
Query: 308 ----ASMKYVKVRHKAREIR-NKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQL 362
S + R K+++ R +K +SR + K+ER+ GS S +GS K
Sbjct: 335 RSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSK-- 392
Query: 363 CKRGKRPLKEIGRKDPGSTEGKD 385
K+ K + P + K+
Sbjct: 393 -KKKKEDTDRSQSRSPSRSVSKE 414
Score = 43.9 bits (102), Expect = 0.001
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 12/182 (6%)
Query: 198 SKVCSYSSSSSSSTAPPASTDTS-SPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKE 256
S+ S+S S S S S S S K +S+S S + ++QS+S+++KE
Sbjct: 186 SRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKE 245
Query: 257 NKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKA-SMKYVKV 315
S P+ K + R GK RS S +E ++ N G+ K+ S K
Sbjct: 246 KSRS-------PSKEKSRSRSHSAGK--SRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKS 296
Query: 316 RHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCK-RGKRPLKEIG 374
+ K+R ++ + R S+ G E+++ S S S G + + R K K G
Sbjct: 297 KSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKG 356
Query: 375 RK 376
RK
Sbjct: 357 RK 358
Score = 32.3 bits (72), Expect = 3.3
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 264 IEEKPALYKKQIRHKPEGKIRPRSWSSGS----SEAGSSSSGNQGELKASMKYVKVRHKA 319
+E+KP +++ + R RS S S S +GSS S + S + R K+
Sbjct: 173 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS 232
Query: 320 REIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSS 356
R + R+ + + EK+ H+ S S S
Sbjct: 233 RSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKS 269
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 45.8 bits (107), Expect = 3e-04
Identities = 79/384 (20%), Positives = 155/384 (40%), Gaps = 59/384 (15%)
Query: 74 LQEQENDIFLGWEKGAYKK-WGKSKKKCSDLTLEEMKKQAAVQCLRS----ASDESSGIE 128
L+E+E G +K A KK ++KKK + ++ +K+ A+ + AS+ G
Sbjct: 309 LEEKE-----GEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKKEPGKASETKQGTV 363
Query: 129 TLVEELCSR----------------LKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVE 172
+ + ++ ++ + K++EK K +E + SP+ E S P+ QV+
Sbjct: 364 KIAAQAAAKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVK 423
Query: 173 MYYEAFPPLSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPASTDTSSPKDCN--SESE 230
E +EI V K V ++ T S K + + E
Sbjct: 424 AKTER---------AKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKSGKTSSILKDKE 474
Query: 231 VTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSS 290
K + +VP ++ EK K+EK +K + ++ KP + + KPE +I+ + +
Sbjct: 475 PIKGKEEKVPASLKEKEPETKKDEKMSK-AGKEVKPKPPQLQGKKEEKPEPQIKKEAKPA 533
Query: 291 GSSEAGSSSSG---NQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIH 347
S + + + KV + + + +K + +H E+ +I
Sbjct: 534 ISEKVQIHKQDIVKPEKTVSHGKPEEKVLKQVKAVTIEKTAKPKPTKKAEHREREPPSIK 593
Query: 348 T--------GSSSSSSSG----SVKQLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKDTE 395
T G+S + SG + + + K +K + R++ ST + L + N
Sbjct: 594 TDKPKPTPKGTSEVTESGKKKTEISEKESKEKADMKHL-REEKVSTRKESLQLHN---VT 649
Query: 396 YKEEPLWYTEPIAEYFVPLSRKSK 419
E+P ++ + + VP S+K+K
Sbjct: 650 KAEKPARVSKDVED--VPASKKAK 671
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 45.1 bits (105), Expect = 5e-04
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 143 SKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSKVCS 202
+K+ IHK + S +PE P K E P ++ P + MT K K
Sbjct: 729 TKEPTTIHKSPDES-TPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTE 787
Query: 203 Y---SSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKF 259
++ +++ AP + +T++ + +ES++T + TT + T K K
Sbjct: 788 RDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTL 847
Query: 260 SNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGS 292
+ K + +I +KPE +P+ ++ S
Sbjct: 848 APKVTTTKKTITTTEIMNKPEETAKPKDRATNS 880
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 45.1 bits (105), Expect = 5e-04
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 143 SKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSKVCS 202
+K+ IHK + S +PE P K E P ++ P + MT K K
Sbjct: 770 TKEPTTIHKSPDES-TPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTE 828
Query: 203 Y---SSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKF 259
++ +++ AP + +T++ + +ES++T + TT + T K K
Sbjct: 829 RDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTL 888
Query: 260 SNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGS 292
+ K + +I +KPE +P+ ++ S
Sbjct: 889 APKVTTTKKTITTTEIMNKPEETAKPKDRATNS 921
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 45.1 bits (105), Expect = 5e-04
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 143 SKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSKVCS 202
+K+ IHK + S +PE P K E P ++ P + MT K K
Sbjct: 822 TKEPTTIHKSPDES-TPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTE 880
Query: 203 Y---SSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKF 259
++ +++ AP + +T++ + +ES++T + TT + T K K
Sbjct: 881 RDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTL 940
Query: 260 SNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGS 292
+ K + +I +KPE +P+ ++ S
Sbjct: 941 APKVTTTKKTITTTEIMNKPEETAKPKDRATNS 973
Score = 31.2 bits (69), Expect = 7.3
Identities = 41/207 (19%), Positives = 72/207 (34%), Gaps = 32/207 (15%)
Query: 202 SYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSN 261
S+ + + T+PP+S P + + T +RS + P +K K +K
Sbjct: 61 SFCAEVHNPTSPPSSKKAPPPSGASQTIKSTTKRSPKPP--------NKKKTKK------ 106
Query: 262 GTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKARE 321
IE + + + E S SS S+ SS N + K +KV+ +
Sbjct: 107 -VIESEEITEEHSVSENQESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKN 165
Query: 322 IRNKKGR--------------NGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRGK 367
KK NG +++ + H S+S + K + R
Sbjct: 166 RTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQ---HNKVSTSPKITTAKPINPRPS 222
Query: 368 RPLKEIGRKDPGSTEGKDLYMENRKDT 394
P K+ T K+ +E ++ T
Sbjct: 223 LPPNSDTSKETSLTVNKETTVETKETT 249
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 45.1 bits (105), Expect = 5e-04
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 143 SKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSKVCS 202
+K+ IHK + S +PE P K E P ++ P + MT K K
Sbjct: 863 TKEPTTIHKSPDES-TPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTE 921
Query: 203 Y---SSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKF 259
++ +++ AP + +T++ + +ES++T + TT + T K K
Sbjct: 922 RDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTL 981
Query: 260 SNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGS 292
+ K + +I +KPE +P+ ++ S
Sbjct: 982 APKVTTTKKTITTTEIMNKPEETAKPKDRATNS 1014
Score = 31.2 bits (69), Expect = 7.3
Identities = 41/207 (19%), Positives = 72/207 (34%), Gaps = 32/207 (15%)
Query: 202 SYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSN 261
S+ + + T+PP+S P + + T +RS + P +K K +K
Sbjct: 102 SFCAEVHNPTSPPSSKKAPPPSGASQTIKSTTKRSPKPP--------NKKKTKK------ 147
Query: 262 GTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKARE 321
IE + + + E S SS S+ SS N + K +KV+ +
Sbjct: 148 -VIESEEITEEHSVSENQESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKN 206
Query: 322 IRNKKGR--------------NGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRGK 367
KK NG +++ + H S+S + K + R
Sbjct: 207 RTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQ---HNKVSTSPKITTAKPINPRPS 263
Query: 368 RPLKEIGRKDPGSTEGKDLYMENRKDT 394
P K+ T K+ +E ++ T
Sbjct: 264 LPPNSDTSKETSLTVNKETTVETKETT 290
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 44.7 bits (104), Expect = 6e-04
Identities = 61/238 (25%), Positives = 93/238 (39%), Gaps = 14/238 (5%)
Query: 70 YDYDLQEQENDIFLGWEK--GAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSASD-ESSG 126
Y E+EN ++ E+ G Y ++G+ KKK K L+ D ES G
Sbjct: 102 YGGGFNERENVEYIEREESDGEYDEFGRKKKKYRG------KAVGPASILKEVEDKESEG 155
Query: 127 IETLVEELCSRLKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPV 186
E +E S+ K + + E+ + E E S K ++ S
Sbjct: 156 EEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSS 215
Query: 187 CLQEIMTVWNKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEK 246
+ ++S+ S SSSSS S + +S + S + S S R S P
Sbjct: 216 RSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRK-RSY 274
Query: 247 TQSKSKNEKENKFSNGTIEEKPALYKKQIRHK-PEGKIRPRSWSSGSSEAGSSSSGNQ 303
+ S S E+ K S K++ R + PE + R SSGSS +GS SS +
Sbjct: 275 SSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHRS---SSGSSHSGSRSSSKK 329
Score = 33.5 bits (75), Expect = 1.5
Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 29/152 (19%)
Query: 218 DTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRH 277
D S +D N + + RS + H ++ S+S + ++
Sbjct: 186 DASEEEDSNKKKSNRRSRSKS--RSSHSRSSSRSSSPSSSR------------------- 224
Query: 278 KPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLK 337
+ R RS SS SS++ S SS + ++ + K R +R R +S S
Sbjct: 225 ---SRSRSRSRSSSSSQSRSRSSSRE---RSRSRGSKSRSSSRSHRGSSSPRKRSYSS-- 276
Query: 338 HGEKAERNIHTGSSSSSSSGSVKQLCKRGKRP 369
ERN S SSSSG K+ R + P
Sbjct: 277 SSSSPERNRKRSRSRSSSSGDRKKRRTRSRSP 308
Score = 31.6 bits (70), Expect = 5.6
Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 6/142 (4%)
Query: 223 KDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGK 282
+D SE E E + + ++ + + +++ + N E+ KK+ + K
Sbjct: 149 EDKESEGE---EEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSK 205
Query: 283 IRP---RSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHG 339
R RS S SS + S S +S + R +RE +G +S G
Sbjct: 206 SRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRG 265
Query: 340 EKAERNIHTGSSSSSSSGSVKQ 361
+ R SSSSS + K+
Sbjct: 266 SSSPRKRSYSSSSSSPERNRKR 287
>gi|56090620 NFKB activating protein-like [Homo sapiens]
Length = 402
Score = 44.3 bits (103), Expect = 8e-04
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 20/132 (15%)
Query: 213 PPASTDTSSPKDCNSESEVTKERSSEVPTTVHE---KTQSKSKNEKENKFSNGTIEEKPA 269
P +D +P + E EVT ++SS + E K S+S+N+K+ K N + + K
Sbjct: 144 PQLDSDEHTPVE--DEEEVTHQKSSSSDSNSEEHRKKKTSRSRNKKKRK--NKSSKRKHR 199
Query: 270 LYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRN 329
Y S S+ S+ S S ++ +KA K K +HK ++ +NKK +
Sbjct: 200 KYSD-------------SDSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKK 246
Query: 330 GQSRLSLKHGEK 341
S S K E+
Sbjct: 247 ESSDSSCKDSEE 258
Score = 30.8 bits (68), Expect = 9.5
Identities = 21/102 (20%), Positives = 46/102 (45%)
Query: 157 PSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPAS 216
P +++ P +D+ E+ ++ ++ T +++K + SS +
Sbjct: 144 PQLDSDEHTPVEDEEEVTHQKSSSSDSNSEEHRKKKTSRSRNKKKRKNKSSKRKHRKYSD 203
Query: 217 TDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENK 258
+D++S D NS+S+ K+R +K ++K K K+ K
Sbjct: 204 SDSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTK 245
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 43.5 bits (101), Expect = 0.001
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 15/188 (7%)
Query: 218 DTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRH 277
D KD + E +ER E HEK + K K ++++K + + +K+ +
Sbjct: 418 DKEREKDREKDKEKDRERERE---KEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKD 474
Query: 278 KPEGKIRPRSWSSGSSEAGSS---------SSGNQGELKASMKYVKVRHKAREIRNKKGR 328
K + + PRS+++ SS SS ++K R + RNKK +
Sbjct: 475 K-KSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDK 533
Query: 329 NGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLKE-IGRKDPGSTEGKDLY 387
+ E+ ER T SS+ K+ ++ LKE K+P S+ K++
Sbjct: 534 KREKERD-HISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVD 592
Query: 388 MENRKDTE 395
++ TE
Sbjct: 593 DKDAPRTE 600
Score = 36.2 bits (82), Expect = 0.23
Identities = 69/340 (20%), Positives = 130/340 (38%), Gaps = 37/340 (10%)
Query: 96 SKKKCSDLTLEEMKKQAAVQCLRSASDESSGIETLVEELCSRLKDLQSKQEEKI---HKK 152
S+ +D LE K+ V+ +R A DE+ E + ++ + +
Sbjct: 191 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 250
Query: 153 LEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTA 212
L+ + S A + PP E P + K L+E+M K + S S+
Sbjct: 251 LKINHSNNAIVKPP---------EMTPQAAAKE--LEEVM------KRVREAQSFISAAI 293
Query: 213 PPASTDTSSPKDCNSESEV-TKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALY 271
P S ++ K S S +K RSS + +++QSK ++ N+ + + +
Sbjct: 294 EPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRR---- 349
Query: 272 KKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKY-VKVRHKAREIRNKKGRNG 330
+ + HK K R R S S + + ++K + K R K RE ++ +
Sbjct: 350 RSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEK 409
Query: 331 QSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCK-RGKRPLKEIGR-KDPGSTEGKDLYM 388
+ + ++ E++ K+ K R K KE + K+ K++
Sbjct: 410 ERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDE 469
Query: 389 ENRKDTEYKEEPLWYTEPIAEYFVPLSRKSKLETTYRNRQ 428
+ +KD + + P Y SR+S+ + R R+
Sbjct: 470 KRKKDKKSRTPPRSYN---------ASRRSRSSSRERRRR 500
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 43.5 bits (101), Expect = 0.001
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 15/188 (7%)
Query: 218 DTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRH 277
D KD + E +ER E HEK + K K ++++K + + +K+ +
Sbjct: 302 DKEREKDREKDKEKDRERERE---KEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKD 358
Query: 278 KPEGKIRPRSWSSGSSEAGSS---------SSGNQGELKASMKYVKVRHKAREIRNKKGR 328
K + + PRS+++ SS SS ++K R + RNKK +
Sbjct: 359 K-KSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDK 417
Query: 329 NGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLKE-IGRKDPGSTEGKDLY 387
+ E+ ER T SS+ K+ ++ LKE K+P S+ K++
Sbjct: 418 KREKERD-HISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVD 476
Query: 388 MENRKDTE 395
++ TE
Sbjct: 477 DKDAPRTE 484
Score = 36.2 bits (82), Expect = 0.23
Identities = 69/340 (20%), Positives = 130/340 (38%), Gaps = 37/340 (10%)
Query: 96 SKKKCSDLTLEEMKKQAAVQCLRSASDESSGIETLVEELCSRLKDLQSKQEEKI---HKK 152
S+ +D LE K+ V+ +R A DE+ E + ++ + +
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 153 LEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTA 212
L+ + S A + PP E P + K L+E+M K + S S+
Sbjct: 135 LKINHSNNAIVKPP---------EMTPQAAAKE--LEEVM------KRVREAQSFISAAI 177
Query: 213 PPASTDTSSPKDCNSESEV-TKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALY 271
P S ++ K S S +K RSS + +++QSK ++ N+ + + +
Sbjct: 178 EPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRR---- 233
Query: 272 KKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKY-VKVRHKAREIRNKKGRNG 330
+ + HK K R R S S + + ++K + K R K RE ++ +
Sbjct: 234 RSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEK 293
Query: 331 QSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCK-RGKRPLKEIGR-KDPGSTEGKDLYM 388
+ + ++ E++ K+ K R K KE + K+ K++
Sbjct: 294 ERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDE 353
Query: 389 ENRKDTEYKEEPLWYTEPIAEYFVPLSRKSKLETTYRNRQ 428
+ +KD + + P Y SR+S+ + R R+
Sbjct: 354 KRKKDKKSRTPPRSYN---------ASRRSRSSSRERRRR 384
>gi|40805104 topoisomerase I binding, arginine/serine-rich [Homo
sapiens]
Length = 1045
Score = 43.1 bits (100), Expect = 0.002
Identities = 58/273 (21%), Positives = 101/273 (36%), Gaps = 20/273 (7%)
Query: 189 QEIMTVWNKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQ 248
+++ TV + + SYSS S + SSP + E + + T + K +
Sbjct: 508 EKMETVKTQEQEQSYSSGDSDVSR------CSSPHSVLGKDEQINKGHCDSSTRIKSKKE 561
Query: 249 SK-SKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELK 307
K S + + N ++ RH+ G R RS S S N +
Sbjct: 562 EKRSTSLSSPRNLNSSVRGDRVYSPYNHRHRKRG--RSRSSDSRSQSRSGHDQKNHRKHH 619
Query: 308 ASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRGK 367
+ R ++RE +GR + R + + R+ SS S+S S + GK
Sbjct: 620 GKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQTLSLSSESTSRSRSRSSDHGK 679
Query: 368 RPLKEIGRKDPGSTEGKDLYMENRKDTEYKEEPLWYT-EPIAEYFVPLSRKSKLETTYRN 426
R + R Y+ N + YK E +Y+ + + R+ L + +
Sbjct: 680 RRSRSRNR--------DRYYLRNNYGSRYKWEYTYYSRNKDRDGYESSYRRRTLSRAHYS 731
Query: 427 RQDTSDLTSEAVEELSESVHGLCISNNNLHKTY 459
RQ +S V+ SE + +N++ K Y
Sbjct: 732 RQSSS--PEFRVQSFSERTNARKKNNHSERKYY 762
>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
Length = 237
Score = 43.1 bits (100), Expect = 0.002
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 29/239 (12%)
Query: 23 GPVSVSEMSLLHALG-PVQTW--LGQELEKCGIDAMIYTRYVLSLLLHDSYDYDLQEQEN 79
GP+ S ++ L P TW + ++LEK + + + ++++ +L++
Sbjct: 11 GPIQSSGPTIQDYLNRPRPTWEEVKEQLEKKKKGSKALAEFEEKM--NENWKKELEKHRE 68
Query: 80 DIFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSASDESSGIETLVEELCSRLK 139
+ G E + K+ K K+K KK S+S +SS + E+ +
Sbjct: 69 KLLSGSESSSKKRQRKKKEK---------KKSGRYSSSSSSSSDSSSSSSDSEDEDKKQG 119
Query: 140 DLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSK 199
+ K++ + HK E S S E +KD ++ ++ ++ ++I + K K
Sbjct: 120 KRRKKKKNRSHKSSESSMS---ETESDSKDSLKKKKKSKDGTEKE----KDIKGLSKKRK 172
Query: 200 VCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENK 258
+ S P S+++ S + E K++SSE EKT+ K K++K +K
Sbjct: 173 MYSEDK--------PLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKHKKHSK 223
Score = 42.4 bits (98), Expect = 0.003
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 233 KERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGS 292
K++ S+ EK K E E K + + KK+ R K E K R SS S
Sbjct: 41 KKKGSKALAEFEEKMNENWKKELE-KHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSSS 99
Query: 293 SEAGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSS 352
S + SSSS + E + K+G+ + + + H + +E ++ S
Sbjct: 100 SSSDSSSSSSDSE---------------DEDKKQGKRRKKKKNRSH-KSSESSMSETESD 143
Query: 353 SSSSGSVKQLCKRG---KRPLKEIGRKDPGSTEGKDLYMENRKDTEYKEE 399
S S K+ K G ++ +K + +K +E K L E+ ++EY EE
Sbjct: 144 SKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEE 193
Score = 38.5 bits (88), Expect = 0.046
Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 123 ESSGIETLVEELCSRLKDLQSKQEEKIHKKLEGSPSP---EAELSPPAKDQVEMYYEAFP 179
+SSG +++ +R + + +E++ KK +GS + E +++ K ++E + E
Sbjct: 14 QSSG--PTIQDYLNRPRPTWEEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLL 71
Query: 180 PLSEKPVCLQEIMTVWNKSK---VCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERS 236
SE ++ K S SSSS SS++ S D + + + +
Sbjct: 72 SGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHK 131
Query: 237 SEVPTTVHEKTQSKSKNEKENKFSNGTIEEK--PALYKKQIRHKPEGKIRPRSWSSGSSE 294
S + ++ SK +K+ K +GT +EK L KK+ + + + SSE
Sbjct: 132 SSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPL--------SSE 183
Query: 295 AGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSS 353
+ S S + K + R KA E KK ++ KH +K ++ + S S
Sbjct: 184 SLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKH------KKHSKKKKKKAASSSPDS 236
Score = 33.9 bits (76), Expect = 1.1
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 11/169 (6%)
Query: 284 RPR-SWSSGSSEAGSSSSGNQG----ELKASMKYVKVRHKAREI------RNKKGRNGQS 332
RPR +W + G++ E K + + K K RE + K R +
Sbjct: 26 RPRPTWEEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKK 85
Query: 333 RLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLKEIGRKDPGSTEGKDLYMENRK 392
+ K G + + + SSSSSS S + K+GKR K+ R S + K
Sbjct: 86 KEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSETESDSK 145
Query: 393 DTEYKEEPLWYTEPIAEYFVPLSRKSKLETTYRNRQDTSDLTSEAVEEL 441
D+ K++ + LS+K K+ + + S SE +EE+
Sbjct: 146 DSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEV 194
>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
Length = 247
Score = 43.1 bits (100), Expect = 0.002
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 29/239 (12%)
Query: 23 GPVSVSEMSLLHALG-PVQTW--LGQELEKCGIDAMIYTRYVLSLLLHDSYDYDLQEQEN 79
GP+ S ++ L P TW + ++LEK + + + ++++ +L++
Sbjct: 21 GPIQSSGPTIQDYLNRPRPTWEEVKEQLEKKKKGSKALAEFEEKM--NENWKKELEKHRE 78
Query: 80 DIFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSASDESSGIETLVEELCSRLK 139
+ G E + K+ K K+K KK S+S +SS + E+ +
Sbjct: 79 KLLSGSESSSKKRQRKKKEK---------KKSGRYSSSSSSSSDSSSSSSDSEDEDKKQG 129
Query: 140 DLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSK 199
+ K++ + HK E S S E +KD ++ ++ ++ ++I + K K
Sbjct: 130 KRRKKKKNRSHKSSESSMS---ETESDSKDSLKKKKKSKDGTEKE----KDIKGLSKKRK 182
Query: 200 VCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENK 258
+ S P S+++ S + E K++SSE EKT+ K K++K +K
Sbjct: 183 MYSEDK--------PLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKHKKHSK 233
Score = 42.4 bits (98), Expect = 0.003
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 233 KERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGS 292
K++ S+ EK K E E K + + KK+ R K E K R SS S
Sbjct: 51 KKKGSKALAEFEEKMNENWKKELE-KHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSSS 109
Query: 293 SEAGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSS 352
S + SSSS + E + K+G+ + + + H + +E ++ S
Sbjct: 110 SSSDSSSSSSDSE---------------DEDKKQGKRRKKKKNRSH-KSSESSMSETESD 153
Query: 353 SSSSGSVKQLCKRG---KRPLKEIGRKDPGSTEGKDLYMENRKDTEYKEE 399
S S K+ K G ++ +K + +K +E K L E+ ++EY EE
Sbjct: 154 SKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEE 203
Score = 38.5 bits (88), Expect = 0.046
Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 123 ESSGIETLVEELCSRLKDLQSKQEEKIHKKLEGSPSP---EAELSPPAKDQVEMYYEAFP 179
+SSG +++ +R + + +E++ KK +GS + E +++ K ++E + E
Sbjct: 24 QSSG--PTIQDYLNRPRPTWEEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLL 81
Query: 180 PLSEKPVCLQEIMTVWNKSK---VCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERS 236
SE ++ K S SSSS SS++ S D + + + +
Sbjct: 82 SGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHK 141
Query: 237 SEVPTTVHEKTQSKSKNEKENKFSNGTIEEK--PALYKKQIRHKPEGKIRPRSWSSGSSE 294
S + ++ SK +K+ K +GT +EK L KK+ + + + SSE
Sbjct: 142 SSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPL--------SSE 193
Query: 295 AGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSS 353
+ S S + K + R KA E KK ++ KH +K ++ + S S
Sbjct: 194 SLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKH------KKHSKKKKKKAASSSPDS 246
Score = 33.9 bits (76), Expect = 1.1
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 11/169 (6%)
Query: 284 RPR-SWSSGSSEAGSSSSGNQG----ELKASMKYVKVRHKAREI------RNKKGRNGQS 332
RPR +W + G++ E K + + K K RE + K R +
Sbjct: 36 RPRPTWEEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESSSKKRQRKK 95
Query: 333 RLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLKEIGRKDPGSTEGKDLYMENRK 392
+ K G + + + SSSSSS S + K+GKR K+ R S + K
Sbjct: 96 KEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSETESDSK 155
Query: 393 DTEYKEEPLWYTEPIAEYFVPLSRKSKLETTYRNRQDTSDLTSEAVEEL 441
D+ K++ + LS+K K+ + + S SE +EE+
Sbjct: 156 DSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEV 204
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 42.7 bits (99), Expect = 0.002
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 16/186 (8%)
Query: 223 KDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHK---- 278
++ + E KER SE E+ + K + EKE K G E+K K++ K
Sbjct: 43 REIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRR 102
Query: 279 ----PEGKIRPRSWSSGSSEAG-SSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQSR 333
EG+ + + E G +S G + E K K + R+ R +K +
Sbjct: 103 EKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERK-----REERKERERKKEEREKE 157
Query: 334 LSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKD 393
K +K ER G ++ K+ +R KE +K+ E ++ E +K
Sbjct: 158 RERKERKKRERK-QVGEKEEERKEKERKERKKRERNRKE-RKKERERKERRERKKERKKK 215
Query: 394 TEYKEE 399
E K+E
Sbjct: 216 EERKKE 221
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 42.4 bits (98), Expect = 0.003
Identities = 74/316 (23%), Positives = 121/316 (38%), Gaps = 53/316 (16%)
Query: 74 LQEQENDIFLGWEKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCL-RSASDESSGIETLVE 132
L+E+E +I K + KSK E+ KK + V ++AS+E + L +
Sbjct: 367 LEEEEREI-----KSSQGLKEKSKSPSPPRLTEDRKKASLVALPEQTASEEETPPPLLTK 421
Query: 133 ELCSRLKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIM 192
E S Q EE+I +P +LSPP D E V +
Sbjct: 422 EASSPPPHPQLHSEEEIEPMEGPAPPVLIQLSPPNTD---------ADTRELLVSQHTVQ 472
Query: 193 TVWNKSKVCSYSSSSSSSTA---------PPASTDTSSPKDCNSESEVTKERSSE-VPTT 242
V S + S S + + S A P T + + E +RS++ +P
Sbjct: 473 LVGGLSPLSSPSDTKAESPAEKVPEESVLPLVQKSTLADYSAQKDLEPESDRSAQPLPLK 532
Query: 243 VHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHK-----PEGKIRPRSWSSGSSEAGS 297
+ E +K E+ K +P+L +K+ R P +++ + SS S + S
Sbjct: 533 IEELALAKGITEECLK--------QPSLEQKEGRRASHTLLPSHRLKQSADSSSSRSSSS 584
Query: 298 SSSGNQGELKA-----SMKYVKVRHKAREI------RNKKGRNGQSRLSLKHGEKAERNI 346
SSS ++ ++ S + +R K R++ N +GR S R+
Sbjct: 585 SSSSSRSRSRSPDSSGSRSHSPLRSKQRDVAQARTHANPRGRPKMGSRSTSESRSRSRS- 643
Query: 347 HTGSSSSSSSGSVKQL 362
S S+SS S K L
Sbjct: 644 ---RSRSASSNSRKSL 656
>gi|55749769 CWC22 spliceosome-associated protein homolog [Homo
sapiens]
Length = 908
Score = 42.4 bits (98), Expect = 0.003
Identities = 49/226 (21%), Positives = 92/226 (40%), Gaps = 23/226 (10%)
Query: 196 NKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPT-------TVHEKTQ 248
NKS S SS+SSSS + + +D+ S D +SES + SS + + V +K
Sbjct: 664 NKSSPSSSSSASSSSESDSSDSDSDS-SDSSSESSSEESDSSSISSHSSASANDVRKKGH 722
Query: 249 SKSKNEKENKF--SNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGEL 306
K+++++ +K + T + K +++ H+ R R + S S+
Sbjct: 723 GKTRSKEVDKLIRNQQTNDRKQKERRQEHGHQETRTERERRSEKHRDQNSSGSNWRDPIT 782
Query: 307 K--ASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQL-- 362
K + R+ + N + + L KHG+ ++ +S S + ++
Sbjct: 783 KYTSDKDVPSERNNYSRVANDRDQEMHIDLENKHGDPKKKRGERRNSFSENEKHTHRIKD 842
Query: 363 ----CKRGKRPLKEIGRKDPGSTEGKDLYMEN-----RKDTEYKEE 399
++ + KE+ RK GS +D Y K + Y E+
Sbjct: 843 SENFRRKDRSKSKEMNRKHSGSRSDEDRYQNGAERRWEKSSRYSEQ 888
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 42.0 bits (97), Expect = 0.004
Identities = 67/309 (21%), Positives = 111/309 (35%), Gaps = 61/309 (19%)
Query: 86 EKGAYKKWGKSKKKCSDLTLEEMKKQAAVQCLRSASDESSGIET------LVEELCSRLK 139
EK YK KS +K ++ + S SDES + E + +K
Sbjct: 626 EKKKYKSTSKSSQKSREIIETDTSS--------SDSDESESLPPSSQTPKYPESNRTPVK 677
Query: 140 DLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSK 199
++E+ ++ SP E EL P + + Y P+ ++ + + +
Sbjct: 678 PSSVEEEDSFFRQRMFSPMEEKELLSPLSEPDDRY----------PLIVKIDLNLLTRIP 727
Query: 200 VCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKF 259
Y T PP + P+ + T+E + V K + K KNE +N+
Sbjct: 728 GKPYKE-----TEPPKGEKKNVPE------KHTREAQKQASEKVSNKGKRKHKNEDDNRA 776
Query: 260 SNGTIEEKPALY-KKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKAS------MKY 312
S +KP K HKP S + E+ S+ + +L S K
Sbjct: 777 SE---SKKPKTEDKNSAGHKP----------SSNRESSKQSAAKEKDLLPSPAGPVPSKD 823
Query: 313 VKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLKE 372
K H +R+ R SLK + + S +SSS+ K+ + KE
Sbjct: 824 PKTEHGSRK------RTISQSSSLKSSSNSNKETSGSSKNSSSTSKQKKTEGKTSSSSKE 877
Query: 373 IGRKDPGST 381
+ K P S+
Sbjct: 878 VKEKAPSSS 886
Score = 32.3 bits (72), Expect = 3.3
Identities = 46/214 (21%), Positives = 76/214 (35%), Gaps = 17/214 (7%)
Query: 202 SYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSN 261
S+S S SSS + S +SS + N S+ PT + +K
Sbjct: 430 SHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNPHKVSPA 489
Query: 262 GTIEEK-PAL--YKKQIRHKPEGK-----IRPRSWSSGSS-------EAGSSSSGNQGEL 306
+++ P+ YKK+ R + G P+ SS + + GS S + +
Sbjct: 490 SSVDSNIPSSQGYKKEGREQGTGNSYTDTSGPKETSSATPGRDSKTIQKGSESGRGRQKS 549
Query: 307 KASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRG 366
A R + + KK + + G K E +SS S K K
Sbjct: 550 PAQSDSTTQRRTVGKKQPKKAEKAAAE-EPRGGLKIESETPVDLASSMPSSRHKAATKGS 608
Query: 367 KRP-LKEIGRKDPGSTEGKDLYMENRKDTEYKEE 399
++P +K+ + P T K Y K ++ E
Sbjct: 609 RKPNIKKESKSSPRPTAEKKKYKSTSKSSQKSRE 642
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 41.6 bits (96), Expect = 0.005
Identities = 45/157 (28%), Positives = 58/157 (36%), Gaps = 27/157 (17%)
Query: 290 SGSSEAGSSSSGNQGE---------LKASMKYVKVRHKAREIRNKKGRNGQSRLSL---K 337
SG S A SS + +GE ++S K RH RE R + G+ G S S +
Sbjct: 177 SGGSPASSSGTQRRGEGSERRPRRDRRSSSGRSKERH--REHRRRDGQRGGSEASKSRSR 234
Query: 338 HGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKDTEYK 397
H E S SSSS G+R S + +D + K
Sbjct: 235 HSHSGEERAEVAKSGSSSSSG-------GRRKSASATSSSSSSRKDRDSKAHRSRTKSSK 287
Query: 398 EEPLWYTEPIAEYFVPLSRKSKLE-TTYRNRQDTSDL 433
E P Y EP Y R+ K E YR R+ S L
Sbjct: 288 EPPSAYKEPPKAY-----REDKTEPKAYRRRRSLSPL 319
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 41.6 bits (96), Expect = 0.005
Identities = 45/157 (28%), Positives = 58/157 (36%), Gaps = 27/157 (17%)
Query: 290 SGSSEAGSSSSGNQGE---------LKASMKYVKVRHKAREIRNKKGRNGQSRLSL---K 337
SG S A SS + +GE ++S K RH RE R + G+ G S S +
Sbjct: 177 SGGSPASSSGTQRRGEGSERRPRRDRRSSSGRSKERH--REHRRRDGQRGGSEASKSRSR 234
Query: 338 HGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLKEIGRKDPGSTEGKDLYMENRKDTEYK 397
H E S SSSS G+R S + +D + K
Sbjct: 235 HSHSGEERAEVAKSGSSSSSG-------GRRKSASATSSSSSSRKDRDSKAHRSRTKSSK 287
Query: 398 EEPLWYTEPIAEYFVPLSRKSKLE-TTYRNRQDTSDL 433
E P Y EP Y R+ K E YR R+ S L
Sbjct: 288 EPPSAYKEPPKAY-----REDKTEPKAYRRRRSLSPL 319
>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
[Homo sapiens]
Length = 1828
Score = 41.6 bits (96), Expect = 0.005
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 38/243 (15%)
Query: 196 NKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEK 255
NK K SS S+ + ++++ +S D S+SE E+ S+ P + H S+S +
Sbjct: 4 NKDKSQEEDSSLHSNASSHSASEEASGSDSGSQSE--SEQGSD-PGSGH---GSESNSSS 57
Query: 256 ENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKV 315
E+ S E + A K Q PE K +P S ++ K +Y V
Sbjct: 58 ESSESQSESESESAGSKSQ-PVLPEAKEKPASKKERIADV----------KKMWEEYPDV 106
Query: 316 RHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLK--EI 373
R R+++ E + NI +SS S SGS K +RG+R LK E
Sbjct: 107 YGVRRSNRSRQ-------------EPSRFNIKEEASSGSESGSPK---RRGQRQLKKQEK 150
Query: 374 GRKDPGSTEGKDLYMENRKDTEYKEEPLWYTEPIAEYFVPLSRKSKLETTYRNRQDTSDL 433
+++P E + ++E +++ + P+ VP R K T R ++ D
Sbjct: 151 WKQEPSEDEQE---QGTSAESEPEQKKVKARRPVPRRTVPKPRVKKQPKTQRGKRKKQDS 207
Query: 434 TSE 436
+ E
Sbjct: 208 SDE 210
>gi|110611184 chromodomain helicase DNA binding protein 2 isoform 2
[Homo sapiens]
Length = 501
Score = 41.6 bits (96), Expect = 0.005
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 38/243 (15%)
Query: 196 NKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEK 255
NK K SS S+ + ++++ +S D S+SE E+ S+ P + H S+S +
Sbjct: 4 NKDKSQEEDSSLHSNASSHSASEEASGSDSGSQSE--SEQGSD-PGSGH---GSESNSSS 57
Query: 256 ENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKV 315
E+ S E + A K Q PE K +P S ++ K +Y V
Sbjct: 58 ESSESQSESESESAGSKSQ-PVLPEAKEKPASKKERIADV----------KKMWEEYPDV 106
Query: 316 RHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLK--EI 373
R R+++ E + NI +SS S SGS K +RG+R LK E
Sbjct: 107 YGVRRSNRSRQ-------------EPSRFNIKEEASSGSESGSPK---RRGQRQLKKQEK 150
Query: 374 GRKDPGSTEGKDLYMENRKDTEYKEEPLWYTEPIAEYFVPLSRKSKLETTYRNRQDTSDL 433
+++P E + ++E +++ + P+ VP R K T R ++ D
Sbjct: 151 WKQEPSEDEQE---QGTSAESEPEQKKVKARRPVPRRTVPKPRVKKQPKTQRGKRKKQDS 207
Query: 434 TSE 436
+ E
Sbjct: 208 SDE 210
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 41.2 bits (95), Expect = 0.007
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 13/146 (8%)
Query: 197 KSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSK---- 252
+S S SSSSSSS++ +S+ +SS +S S + SS P+ Q+ K
Sbjct: 2606 RSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASP 2665
Query: 253 -----NEKENKFSNGTI----EEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQ 303
E+ ++ I + + Y R +P + PR S SSE GS
Sbjct: 2666 KKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRG 2725
Query: 304 GELKASMKYVKVRHKAREIRNKKGRN 329
S K + R +R++ R+
Sbjct: 2726 DSRSPSHKRRRETPSPRPMRHRSSRS 2751
Score = 38.5 bits (88), Expect = 0.046
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Query: 179 PPLS---EKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKER 235
PP S ++P L + + + S SSSSSSS++ +S+ +SS +S S+
Sbjct: 2509 PPASTGAQQPSALAALQPA-KERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSS 2567
Query: 236 SSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEA 295
P ++ S + KE E PA K++ S SS SS +
Sbjct: 2568 LPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSS 2627
Query: 296 GSSSSGNQGELKAS 309
SSSS + +S
Sbjct: 2628 SSSSSSSSSSSSSS 2641
Score = 36.2 bits (82), Expect = 0.23
Identities = 56/289 (19%), Positives = 101/289 (34%), Gaps = 38/289 (13%)
Query: 97 KKKCSDLTLEEMKKQAAVQCLRSASDESSGIETLVEELCSRLKDLQSKQEEKIHKKLEGS 156
K+ D+ E K++ ++CL +E ++EE + +Q K LE
Sbjct: 51 KRPNPDILDHERKRRVELRCLE--------LEEMMEEQGYEEQQIQEKVATFRLMLLEKD 102
Query: 157 PSPEAELSPPAKDQVEMYYEAFPPLSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPA- 215
+P + P + L+EK + + + S SY SS A
Sbjct: 103 VNPGGKEETPGQRPAVTETHQLAELNEKKN--ERLRAAFGISD--SYVDGSSFDPQRRAR 158
Query: 216 STDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQI 275
+P+ S V + SS PT +K + K + ++ S+ E K + KK+
Sbjct: 159 EAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKH 218
Query: 276 RHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLS 335
R + E K R + S+ R+ ++KK + +S
Sbjct: 219 RSESESKKRKHRSPTPKSK-------------------------RKSKDKKRKRSRSTTP 253
Query: 336 LKHGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLKEIGRKDPGSTEGK 384
+A R+ S+SSS + + K + + P G+
Sbjct: 254 APKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGR 302
Score = 33.1 bits (74), Expect = 1.9
Identities = 54/264 (20%), Positives = 95/264 (35%), Gaps = 28/264 (10%)
Query: 118 RSASDESSGIETLVEELCSRLKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEA 177
RS S+ S +T+ + S QE + E++ SP +K +
Sbjct: 1516 RSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQ 1575
Query: 178 FPPLSEKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSS 237
P V +KS++ S S SS P + S S+ + E +
Sbjct: 1576 RSRSGSSP-------EVDSKSRLSPRRSRSGSS--PEVKDKPRAAPRAQSGSDSSPEPKA 1626
Query: 238 EVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGSSEAGS 297
P + +++S S ++ G E + + H P+ + R S SS
Sbjct: 1627 PAPRALPRRSRSGSSSK-----GRGPSPEGSSSTESSPEHPPKSRTARRG--SRSSPEPK 1679
Query: 298 SSSGNQGELKASMKYVKVRHKAREIRNKKGRNG----QSRLSLKHG--------EKAERN 345
+ S ++S ++ KAR R + + +SR +H E AE++
Sbjct: 1680 TKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKS 1739
Query: 346 IHTGSSSSSSSGSVKQLCKRGKRP 369
+ S+SS K +RG+ P
Sbjct: 1740 RSSRRRRSASSPRTKTTSRRGRSP 1763
Score = 32.3 bits (72), Expect = 3.3
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 158 SPEAELSPPAKDQVEMYYEAFPPLSEKPVCL-QEIMTVWNKSKVCSYSSSSSSSTAPPAS 216
+P L PPA+DQ + S++ CL + V + S + ++++S+A +
Sbjct: 2434 APSQSLLPPAQDQPRSPVPS--AFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHN 2491
Query: 217 TDTSSPKDCNSESEVTKERSS---EVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKK 273
S P S+V + +S + P+ + +K + + S+ + +
Sbjct: 2492 GMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSS---- 2547
Query: 274 QIRHKPEGKIRPRSWSSGSSEAGSSSSGNQG-----ELKASMKYVKVRHKAREIRNKKGR 328
S SS SS +GSSSS ++G + + ++K V A + ++GR
Sbjct: 2548 -------------SSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGR 2594
Query: 329 NGQSRLSLKHGEKAERNIHTGSSSSSSSGS 358
+ + + + + + SSSSSSS S
Sbjct: 2595 PPEPTPAKRKRRSSSSSSSSSSSSSSSSSS 2624
Score = 32.0 bits (71), Expect = 4.3
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 27/253 (10%)
Query: 119 SASDESSGIETLVEELCSRLKDLQSKQEEKIHKKLEGSPSPEAELS---PPAKDQV--EM 173
+++ S ET ++ S +D ++EK SPSPE + PPA + E
Sbjct: 316 TSTQRPSSPETATKQPSSPYEDKDKDKKEK--SATRPSPSPERSSTGPEPPAPTPLLAER 373
Query: 174 YYEAFPPLSEKPVCLQEIMTVWNKSKVCSYS---------SSSSSSTAPPASTDTSSPKD 224
+ + PL+ P+ + + S S SSSS ++PP+ T +
Sbjct: 374 HGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRH 433
Query: 225 CNSESEVTKERSSEVPTTVHEKTQS-KSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKI 283
+S E K + P + E + S SKN + + P
Sbjct: 434 ASSSPESPK--PAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAK 491
Query: 284 RPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRHKAREIRNKK-GRNGQSRLSLKHGEKA 342
R RS S ++ G S S S ++ + R R R++ R G+SR + G
Sbjct: 492 RGRSRSRTPTKRGHSRS-------RSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSR 544
Query: 343 ERNIHTGSSSSSS 355
RN S S+
Sbjct: 545 SRNTQRRGRSRSA 557
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 41.2 bits (95), Expect = 0.007
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 197 KSKVC---SYSSSSSSSTAPPASTDTSSPKDCNSESEVTKERSSEVPTTVHEKTQSKSKN 253
K K C S SSSS SS++ S D + + + + S +T +++SK
Sbjct: 98 KKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESV 157
Query: 254 EKENKFSNGTIEEKP--ALYKKQIRHKPEGKIRPRSWSSGSSEAGSSSSGNQGELKASMK 311
+K+ K + T +EK +L KK+ + P+ K S SS S + +++A K
Sbjct: 158 KKKKKSKDETEKEKDVRSLSKKRKKSYPDDK--------PLSSESSSESDYEEDVQAKKK 209
Query: 312 YVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSSSS 354
R + RE +K + + + KH +K ++ +GSS S
Sbjct: 210 R---RCEEREQAKEKVKKKKKKQHKKHSKKKKKK--SGSSHKS 247
Score = 36.2 bits (82), Expect = 0.23
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 16/168 (9%)
Query: 233 KERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKIRPRSWSSGS 292
K+ S+ EK K E E K + + KK+ R K K RS SS S
Sbjct: 51 KKTGSKALAEFEEKMNENWKKELE-KSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSS 109
Query: 293 SEAGSSSSGNQGELKASMKYVKVRHKAREIRNKKGRNGQSRLSLKHGEKAERNIHTGSSS 352
S SSSS + + + + + + + KK R+ +S S H ++E
Sbjct: 110 SSDSSSSSSDSED--------EEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKK 161
Query: 353 SSSSGSVKQLCKRGKRPLKEIGRKDPGS-TEGKDLYMENRKDTEYKEE 399
S + K+ + ++ + +K S + K L E+ +++Y+E+
Sbjct: 162 KSKDETEKE------KDVRSLSKKRKKSYPDDKPLSSESSSESDYEED 203
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 40.8 bits (94), Expect = 0.009
Identities = 70/304 (23%), Positives = 106/304 (34%), Gaps = 33/304 (10%)
Query: 118 RSASDESSGIETLVEELCSRLKDLQSKQEEKIHKKLEGSPSPEAELSPPAKDQVEMYYEA 177
R S+ S + L E KD K E K E +P P+A P E E+
Sbjct: 206 RKDSESKSSSKELEREQAKSSKDTSRKLGEGRLPKEEKAPPPKAAFKEPKMALKETKLES 265
Query: 178 FPPL--------------SEKPVCLQEIMTVWNKSKVCSYSSSSSSSTAPPASTDTSSPK 223
P S++P K K SSS S +AP S TSS
Sbjct: 266 TSPKGGPPPPPPPPPRASSKRPATADSPKPSAKKQKK---SSSKGSRSAPGTSPRTSSSS 322
Query: 224 DCNSESEVTKERSSEVPTTVHEKTQSKSKNEKENKFSNGTIEEKPALYKKQIRHKPEGKI 283
S+ + K++SS V K +S+ + K+ + E A +K +
Sbjct: 323 SF-SDKKPAKDKSSTRGEKV--KAESEPREAKKALEVEESNSEDEASFKSESAQSSPSNS 379
Query: 284 RPRSWSSGSSEAGSSSSGNQGELKASMKYVKVRH-------KAREIRNKKGRNGQSRLSL 336
S SS S+ S + +QG L++ ++ ++ E K SRLS
Sbjct: 380 SSSSDSSSDSDFEPSQNHSQGPLRSMVEDLQSEESDEDDSSSGEEAAGKTNPGRDSRLSF 439
Query: 337 KHGEKAERNIHTGSSSSSSSGSVKQLCKRGKRPLKEIGRKDPGS-TEGKDLYMENRKDTE 395
E + SS S K K GR+ P S ++ + + + D
Sbjct: 440 SDSES-----DNSADSSLPSREPPPPQKPPPPNSKVSGRRSPESCSKPEKILKKGTYDKA 494
Query: 396 YKEE 399
Y +E
Sbjct: 495 YTDE 498
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,821,347
Number of Sequences: 37866
Number of extensions: 2832736
Number of successful extensions: 10334
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 281
Number of HSP's that attempted gapping in prelim test: 9125
Number of HSP's gapped (non-prelim): 1169
length of query: 1395
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1280
effective length of database: 13,892,928
effective search space: 17782947840
effective search space used: 17782947840
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.