Search of human proteins with 154689817

Search of human proteins with 154689817

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens]
         (498 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens]      1031   0.0  
gi|74271816 radical fringe [Homo sapiens]                              72   2e-12
gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]              67   3e-11
gi|9910144 core 1 synthase, glycoprotein-N-acetylgalactosamine 3...    67   4e-11
gi|93141005 lunatic fringe isoform b [Homo sapiens]                    64   2e-10
gi|93140999 lunatic fringe isoform a [Homo sapiens]                    64   2e-10
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]              63   5e-10
gi|13540527 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...    45   1e-04
gi|157412240 C1GALT1-specific chaperone 1-like [Homo sapiens]          44   3e-04
gi|21536461 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransfer...    43   8e-04
gi|58532584 C1GALT1-specific chaperone 1 [Homo sapiens]                38   0.024
gi|23097329 C1GALT1-specific chaperone 1 [Homo sapiens]                38   0.024
gi|21687139 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...    35   0.12 
gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens]           35   0.21 
gi|155369221 potassium channel tetramerisation domain containing...    33   0.46 
gi|111160385 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...    33   0.78 
gi|31542693 glycosyltransferase [Homo sapiens]                         33   0.78 
gi|38348376 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...    32   1.0  
gi|24307911 acid sphingomyelinase-like phosphodiesterase 3A [Hom...    30   3.9  
gi|31791030 keratin associated protein 19-1 [Homo sapiens]             30   5.1  
gi|31791026 keratin associated protein 19-3 [Homo sapiens]             30   5.1  
gi|209977097 tripartite motif-containing 66 [Homo sapiens]             30   6.6  
gi|15619008 vacuolar protein sorting 13A isoform B [Homo sapiens]      29   8.7  
gi|66346676 vacuolar protein sorting 13A isoform D [Homo sapiens]      29   8.7  
gi|66346674 vacuolar protein sorting 13A isoform A [Homo sapiens]      29   8.7  
gi|66346672 vacuolar protein sorting 13A isoform C [Homo sapiens]      29   8.7  

>gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens]
          Length = 498

 Score = 1031 bits (2666), Expect = 0.0
 Identities = 498/498 (100%), Positives = 498/498 (100%)

Query: 1   MRPPACWWLLAPPALLALLTCSLAFGLASEDTKKEVKQSQDLEKSGISRKNDIDLKGIVF 60
           MRPPACWWLLAPPALLALLTCSLAFGLASEDTKKEVKQSQDLEKSGISRKNDIDLKGIVF
Sbjct: 1   MRPPACWWLLAPPALLALLTCSLAFGLASEDTKKEVKQSQDLEKSGISRKNDIDLKGIVF 60

Query: 61  VIQSQSNSFHAKRAEQLKKSILKQAADLTQELPSVLLLHQLAKQEGAWTILPLLPHFSVT 120
           VIQSQSNSFHAKRAEQLKKSILKQAADLTQELPSVLLLHQLAKQEGAWTILPLLPHFSVT
Sbjct: 61  VIQSQSNSFHAKRAEQLKKSILKQAADLTQELPSVLLLHQLAKQEGAWTILPLLPHFSVT 120

Query: 121 YSRNSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHDEEATIIHHYAFSENPTV 180
           YSRNSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHDEEATIIHHYAFSENPTV
Sbjct: 121 YSRNSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHDEEATIIHHYAFSENPTV 180

Query: 181 FKYPDFAAGWALSIPLVNKLTKRLKSESLKSDFTIDLKHEIALYIWDKGGGPPLTPVPEF 240
           FKYPDFAAGWALSIPLVNKLTKRLKSESLKSDFTIDLKHEIALYIWDKGGGPPLTPVPEF
Sbjct: 181 FKYPDFAAGWALSIPLVNKLTKRLKSESLKSDFTIDLKHEIALYIWDKGGGPPLTPVPEF 240

Query: 241 CTNDVDFYCATTFHSFLPLCRKPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEY 300
           CTNDVDFYCATTFHSFLPLCRKPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEY
Sbjct: 241 CTNDVDFYCATTFHSFLPLCRKPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEY 300

Query: 301 YSDYTENSIPTVDLGIPNTDRGHCGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQ 360
           YSDYTENSIPTVDLGIPNTDRGHCGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQ
Sbjct: 301 YSDYTENSIPTVDLGIPNTDRGHCGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQ 360

Query: 361 HLLSCYDSGEPVFLGERYGYGLGTGGYSYITGGGGMVFSREAVRRLLASKCRCYSNDAPD 420
           HLLSCYDSGEPVFLGERYGYGLGTGGYSYITGGGGMVFSREAVRRLLASKCRCYSNDAPD
Sbjct: 361 HLLSCYDSGEPVFLGERYGYGLGTGGYSYITGGGGMVFSREAVRRLLASKCRCYSNDAPD 420

Query: 421 DMVLGMCFSGLGIPVTHSPLFHQARPVDYPKDYLSHQVPISFHKHWNIDPVKVYFTWLAP 480
           DMVLGMCFSGLGIPVTHSPLFHQARPVDYPKDYLSHQVPISFHKHWNIDPVKVYFTWLAP
Sbjct: 421 DMVLGMCFSGLGIPVTHSPLFHQARPVDYPKDYLSHQVPISFHKHWNIDPVKVYFTWLAP 480

Query: 481 SDEDKARQETQKGFREEL 498
           SDEDKARQETQKGFREEL
Sbjct: 481 SDEDKARQETQKGFREEL 498


>gi|74271816 radical fringe [Homo sapiens]
          Length = 331

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 38/231 (16%)

Query: 264 VKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEYYSDYTENSIPTVDL--------- 314
           ++  D+F+AVKT +K HG R+ ++ +TW S+A    +   +T+   P ++L         
Sbjct: 55  LRPDDVFIAVKTTRKNHGPRLRLLLRTWISRARQQTFI--FTDGDDPELELQGGDRVINT 112

Query: 315 --GIPNTDRGHCGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPV 372
                 T +  C K     ++F+   +    W   VDDD  ++   L HLLS +   + V
Sbjct: 113 NCSAVRTRQALCCKMSVEYDKFIESGR---KWFCHVDDDNYVNARSLLHLLSSFSPSQDV 169

Query: 373 FLGE-------------RYGYGLGTGGYSYITGGGGMVFSRE-AVRRLLASKCRCYSNDA 418
           +LG              + G  + T  + + TGG G   SR  A++    +    + + A
Sbjct: 170 YLGRPSLDHPIEATERVQGGRTVTTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTA 229

Query: 419 -----PDDMVLGMCFSG-LGIPVTHSPLFHQ--ARPVDYPKDYLSHQVPIS 461
                PDD  +G    G LG  + HSPLFH         P D L  QV +S
Sbjct: 230 EQVRLPDDCTVGYIVEGLLGARLLHSPLFHSHLENLQRLPPDTLLQQVTLS 280


>gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]
          Length = 802

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 263 PVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQA-SLIEYYS-DYTENSIPTVDLGIPNTD 320
           P  +  +FV V T +K+   R     +TW       ++++S + ++ S+P   + +   D
Sbjct: 81  PRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVD 140

Query: 321 RGHCG--KTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPVFLGERY 378
             +    K+F +L+   +   DK  W +  DDD  I   RL++ L   +S EP+FLG+  
Sbjct: 141 DSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQT- 199

Query: 379 GYGLGT----------GGYSYITGGGGMVFSREAVRRLL--ASKCRCYSNDAPDDMVLGM 426
             GLGT           G ++  GG G++ SRE +RR++    KC        +D+ +G 
Sbjct: 200 --GLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGR 257

Query: 427 C 427
           C
Sbjct: 258 C 258


>gi|9910144 core 1 synthase, glycoprotein-N-acetylgalactosamine
           3-beta-galactosyltransferase, 1 [Homo sapiens]
          Length = 363

 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 5/149 (3%)

Query: 287 VKQTWESQASLIEYYSDYTENSIPTVDLGIPNTDRGHCGKTFAILERFLNRSQDKTAWLV 346
           VK TW  + + + + S       P V L           KT    +       +   W +
Sbjct: 107 VKATWAQRCNKVLFMSSEENKDFPAVGLKTKEGRDQLYWKTIKAFQYVHEHYLEDADWFL 166

Query: 347 IVDDDTLISISRLQHLLSCYDSGEPVFLGERYGYGLGTGGYSYITGGGGMVFSREAVRRL 406
             DDDT + +  L+ LLS YD  EP++ G R+   +  G   Y++GG G V S+EA++R 
Sbjct: 167 KADDDTYVILDNLRWLLSKYDPEEPIYFGRRFKPYVKQG---YMSGGAGYVLSKEALKRF 223

Query: 407 LAS--KCRCYSNDAPDDMVLGMCFSGLGI 433
           + +    +C  + + +D+ LG C   + +
Sbjct: 224 VDAFKTDKCTHSSSIEDLALGRCMEIMNV 252



 Score = 33.1 bits (74), Expect = 0.60
 Identities = 17/98 (17%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 62  IQSQSNSFHAKRAEQLKKSILKQAADLTQELPSVLLLHQLAKQEGAWTILPLLPHFSVTY 121
           ++ ++    A  A++  K +L  +++  ++ P+V L  +  + +  W  +    +    Y
Sbjct: 100 LEKKAKHVKATWAQRCNK-VLFMSSEENKDFPAVGLKTKEGRDQLYWKTIKAFQYVHEHY 158

Query: 122 SRNSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGK 159
             ++ W    +++T + +  L   L +YDP +  + G+
Sbjct: 159 LEDADWFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR 196


>gi|93141005 lunatic fringe isoform b [Homo sapiens]
          Length = 361

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 32/230 (13%)

Query: 262 KPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEY-YSDYTENSIP--TVDLGIPN 318
           +P+  +D+F+AVKT KKFH  R+ ++ +TW S+   + + ++D  + ++   T ++ I N
Sbjct: 108 EPLAPRDVFIAVKTTKKFHRARLDLLLETWISRHKEMTFIFTDGEDEALARHTGNVVITN 167

Query: 319 TDRGHCGKTFAI-----LERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPVF 373
               H  +  +       +RF+   +    W   VDDD  +++  L  LL+ Y     V+
Sbjct: 168 CSAAHSRQALSCKMAVEYDRFIESGR---KWFCHVDDDNYVNLRALLRLLASYPHTRDVY 224

Query: 374 LG-----------ERYGYG-LGTGGYSYITGGGGMVFSRE-AVRRLLASKCRCYSNDA-- 418
           +G           ER     +    + + TGG G   SR  A++    +    + N A  
Sbjct: 225 VGKPSLDRPIQAMERVSENKVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMNTAER 284

Query: 419 ---PDDMVLGMCFSG-LGIPVTHSPLFHQ--ARPVDYPKDYLSHQVPISF 462
              PDD  +G      LG+P+  S LFH         P   L  QV +S+
Sbjct: 285 IRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTSELHEQVTLSY 334


>gi|93140999 lunatic fringe isoform a [Homo sapiens]
          Length = 379

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 32/230 (13%)

Query: 262 KPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEY-YSDYTENSIP--TVDLGIPN 318
           +P+  +D+F+AVKT KKFH  R+ ++ +TW S+   + + ++D  + ++   T ++ I N
Sbjct: 108 EPLAPRDVFIAVKTTKKFHRARLDLLLETWISRHKEMTFIFTDGEDEALARHTGNVVITN 167

Query: 319 TDRGHCGKTFAI-----LERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPVF 373
               H  +  +       +RF+   +    W   VDDD  +++  L  LL+ Y     V+
Sbjct: 168 CSAAHSRQALSCKMAVEYDRFIESGR---KWFCHVDDDNYVNLRALLRLLASYPHTRDVY 224

Query: 374 LG-----------ERYGYG-LGTGGYSYITGGGGMVFSRE-AVRRLLASKCRCYSNDA-- 418
           +G           ER     +    + + TGG G   SR  A++    +    + N A  
Sbjct: 225 VGKPSLDRPIQAMERVSENKVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMNTAER 284

Query: 419 ---PDDMVLGMCFSG-LGIPVTHSPLFHQ--ARPVDYPKDYLSHQVPISF 462
              PDD  +G      LG+P+  S LFH         P   L  QV +S+
Sbjct: 285 IRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTSELHEQVTLSY 334


>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
          Length = 882

 Score = 63.2 bits (152), Expect = 5e-10
 Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 23/184 (12%)

Query: 269 IFVAVKTCKKFHGDRIPIVKQTWESQA-SLIEYYSDYTENSI-----PTVDLGIPNTDRG 322
           ++V V T +K+ G R    ++TW       +E++S     +      P   + +P  D  
Sbjct: 173 LYVGVMTAQKYLGSRALAAQRTWARFIPGRVEFFSSQQPPNAGQPPPPLPVIALPGVDDS 232

Query: 323 HCG--KTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPVFLGERYGY 380
           +    K+F +++   +   DK  W +  DDD  I   +L+  L   +S +P++LG+    
Sbjct: 233 YPPQKKSFMMIKYMHDHYLDKYEWFMRADDDVYIKGDKLEEFLRSLNSSKPLYLGQT--- 289

Query: 381 GLGT----------GGYSYITGGGGMVFSREAVRRLL--ASKCRCYSNDAPDDMVLGMCF 428
           GLG            G ++  GG GM+FSRE +RR++    +C        +D+ +G C 
Sbjct: 290 GLGNIEELGKLGLEPGENFCMGGPGMIFSREVLRRMVPHIGECLREMYTTHEDVEVGRCV 349

Query: 429 SGLG 432
              G
Sbjct: 350 RRFG 353


>gi|13540527 UDP-GlcNAc:betaGal
           beta-1,3-N-acetylglucosaminyltransferase 4 [Homo
           sapiens]
          Length = 378

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 32/176 (18%)

Query: 331 LERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPVFLGERYGYGLGTGG---- 386
           L+R++  +  +  +++  DDD  + +  +   L  +D  + + +G+     L        
Sbjct: 200 LQRWVVAACPQAHFMLKGDDDVFVHVPNVLEFLDGWDPAQDLLVGDVIRQALPNRNTKVK 259

Query: 387 ------------YSYITGGGGMVFSREAVRRLLASKCRCYSNDAP----DDMVLGMCFSG 430
                       Y    GGGG V SR  VRRL A        DA     DD+ +GMC   
Sbjct: 260 YFIPPSMYRATHYPPYAGGGGYVMSRATVRRLQA-----IMEDAELFPIDDVFVGMCLRR 314

Query: 431 LGI-PVTHS--PLFHQARPVDYPKDYLSHQVPISFHKHWNIDPVKVYFTWLAPSDE 483
           LG+ P+ H+    F   RP+D P D   ++  +  H+   + P++++  W   +DE
Sbjct: 315 LGLSPMHHAGFKTFGIRRPLD-PLDPCLYRGLLLVHR---LSPLEMWTMWALVTDE 366


>gi|157412240 C1GALT1-specific chaperone 1-like [Homo sapiens]
          Length = 315

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 11/121 (9%)

Query: 286 IVKQTWESQASLIEYYSDYTENSIPTVDLGIPNTDRGHCGKTFAILERFLNRSQDKTAWL 345
           ++K+TW       E Y    +N        I + DR    +T    +    +  D   W 
Sbjct: 86  VLKETWTKHCDKAELYDTKNDNLF-----NIESNDRWVQMRT--AYKYVFEKYGDNYNWF 138

Query: 346 VIVDDDTLISISRLQHLLSCYDSGEPVFLGERYGYGLGTGGYSYITGGGGMVFSREAVRR 405
            +    T   I  L++LL   D+ +P +LG    +G       Y+T  GG+V SRE ++R
Sbjct: 139 FLALPTTFAVIENLKYLLFTRDASQPFYLGHTVIFG----DLEYVTVEGGIVLSRELMKR 194

Query: 406 L 406
           L
Sbjct: 195 L 195


>gi|21536461 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
           [Homo sapiens]
          Length = 321

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 25/200 (12%)

Query: 268 DIFVAVKTCKKFHGDRIPIVKQTWESQASLIEY-YSDYTENSIPT---VDLGIPN--TDR 321
           D+F+AVKT + FH  R+ ++  TW S+     + ++D  +  +       L + N   + 
Sbjct: 55  DVFIAVKTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLGSHLVVTNCSAEH 114

Query: 322 GHCGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPVFLGE----- 376
            H   +  +   F         W   VDDD  ++   L  LL  +     V++G      
Sbjct: 115 SHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRPSLNR 174

Query: 377 -------RYGYGLGTGGYSYITGGGGMVFSREAVRRLL--ASKCRCYSNDA----PDDMV 423
                  +         + + TGG G   +R+   ++   AS  R     A    PDD  
Sbjct: 175 PIHASEPQPHNRTRLVQFWFATGGAGFCINRKLALKMAPWASGSRFMDTSALIRLPDDCT 234

Query: 424 LGMCFS-GLGIPVTHSPLFH 442
           +G      LG  +  SPLFH
Sbjct: 235 MGYIIECKLGGRLQPSPLFH 254


>gi|58532584 C1GALT1-specific chaperone 1 [Homo sapiens]
          Length = 318

 Score = 37.7 bits (86), Expect = 0.024
 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 10/121 (8%)

Query: 287 VKQTWESQASLIEYYSDYTENSIPTVDLGIPNTDRGHCGKTFAILERF-LNRSQDKTAWL 345
           VK+TW       E++S        ++     N D            ++  ++ +D+  W 
Sbjct: 86  VKETWTKHCDKAEFFSSENVKVFESI-----NMDTNDMWLMMRKAYKYAFDKYRDQYNWF 140

Query: 346 VIVDDDTLISISRLQHLLSCYDSGEPVFLGERYGYGLGTGGYSYITGGGGMVFSREAVRR 405
            +    T   I  L++ L   D  +P +LG    + + +G   Y+   GG+V S E+++R
Sbjct: 141 FLARPTTFAIIENLKYFLLKKDPSQPFYLG----HTIKSGDLEYVGMEGGIVLSVESMKR 196

Query: 406 L 406
           L
Sbjct: 197 L 197


>gi|23097329 C1GALT1-specific chaperone 1 [Homo sapiens]
          Length = 318

 Score = 37.7 bits (86), Expect = 0.024
 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 10/121 (8%)

Query: 287 VKQTWESQASLIEYYSDYTENSIPTVDLGIPNTDRGHCGKTFAILERF-LNRSQDKTAWL 345
           VK+TW       E++S        ++     N D            ++  ++ +D+  W 
Sbjct: 86  VKETWTKHCDKAEFFSSENVKVFESI-----NMDTNDMWLMMRKAYKYAFDKYRDQYNWF 140

Query: 346 VIVDDDTLISISRLQHLLSCYDSGEPVFLGERYGYGLGTGGYSYITGGGGMVFSREAVRR 405
            +    T   I  L++ L   D  +P +LG    + + +G   Y+   GG+V S E+++R
Sbjct: 141 FLARPTTFAIIENLKYFLLKKDPSQPFYLG----HTIKSGDLEYVGMEGGIVLSVESMKR 196

Query: 406 L 406
           L
Sbjct: 197 L 197


>gi|21687139 UDP-GlcNAc:betaGal
           beta-1,3-N-acetylglucosaminyltransferase 7 [Homo
           sapiens]
          Length = 401

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 18/106 (16%)

Query: 349 DDDTLISISRLQHLLSCYDSGEPVFLGE-------------RY---GYGLGTGGYSYITG 392
           DDD  ++ + L   L+     E +F+G+             +Y   G   G   Y    G
Sbjct: 240 DDDVFVNPTNLLEFLADRQPQENLFVGDVLQHARPIRRKDNKYYIPGALYGKASYPPYAG 299

Query: 393 GGGMVFSREAVRRLLASKCRCYSNDAPDDMVLGMCFSGLGI-PVTH 437
           GGG + +    RRL  + C        DD+ LGMC   LG+ P  H
Sbjct: 300 GGGFLMAGSLARRLHHA-CDTLELYPIDDVFLGMCLEVLGVQPTAH 344


>gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens]
          Length = 772

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 5/113 (4%)

Query: 344 WLVIVDDDTLISISRLQHLLSCYDSGEPVFLGERYGYGLGTGGYS-YITGGGGMVFSREA 402
           W  I+ DDT +   RL  L       + ++LG    + +G G  + Y  GG G + SR  
Sbjct: 177 WFFIMQDDTYVQAPRLAALAGHLSINQDLYLGRAEEF-IGAGEQARYCHGGFGYLLSRSL 235

Query: 403 VRRLL--ASKCRCYSNDAPDDMVLGMC-FSGLGIPVTHSPLFHQARPVDYPKD 452
           + RL      CR     A  D  LG C    LG+         Q R  +  K+
Sbjct: 236 LLRLRPHLDGCRGDILSARPDEWLGRCLIDSLGVGCVSQHQGQQYRSFELAKN 288



 Score = 33.5 bits (75), Expect = 0.46
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 107 AWTILPLLPHFSVTYSRNSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKA 160
           AW +   L H    +  +  W F  +++T +Q P+L         +++ +LG+A
Sbjct: 157 AWLMSETLRHLHTHFGADYDWFFIMQDDTYVQAPRLAALAGHLSINQDLYLGRA 210


>gi|155369221 potassium channel tetramerisation domain containing 19
           [Homo sapiens]
          Length = 926

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 122 SRNSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHDEEATIIHH-YAFSENP 178
           S    W  FC+E     IP L E L + +  K W   K   +EEA  I   +  +E P
Sbjct: 461 SEFKEWPLFCQEVEEYHIPSLSEALAQCEAYKSWTQEKESENEEAFSIRRLHVVTEGP 518


>gi|111160385 UDP-GlcNAc:betaGal
           beta-1,3-N-acetylglucosaminyltransferase 9 [Homo
           sapiens]
          Length = 402

 Score = 32.7 bits (73), Expect = 0.78
 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 383 GTGGYSYITGGGGMVFSREAVRRLLASKCRCYSNDAPDDMVLGMCFSGLGIPVTHSPLF 441
           G   Y    GGGG V S   + RL A  C        DD+ LGMC   L +     P F
Sbjct: 279 GLPAYPAYAGGGGFVLSGATLHRL-AGACAQVELFPIDDVFLGMCLQRLRLTPEPHPAF 336


>gi|31542693 glycosyltransferase [Homo sapiens]
          Length = 580

 Score = 32.7 bits (73), Expect = 0.78
 Identities = 11/26 (42%), Positives = 19/26 (73%)

Query: 123 RNSSWIFFCEEETRIQIPKLLETLRR 148
           RN  W+F   ++T++ IP L++T+RR
Sbjct: 438 RNPEWLFRIYQDTKVDIPSLIQTIRR 463


>gi|38348376 UDP-GlcNAc:betaGal
           beta-1,3-N-acetylglucosaminyltransferase 8 [Homo
           sapiens]
          Length = 397

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 7/72 (9%)

Query: 385 GGYSYITGGGGMVFSREAVRRLLASKCRCYSNDAP---DDMVLGMCFSGLGIPVTHSPLF 441
           GGY     GGG V +      LL +  R     AP   +D+  G+C   LG+     P F
Sbjct: 299 GGYPAYASGGGYVIAGRLAPWLLRAAARV----APFPFEDVYTGLCIRALGLVPQAHPGF 354

Query: 442 HQARPVDYPKDY 453
             A P D   D+
Sbjct: 355 LTAWPADRTADH 366


>gi|24307911 acid sphingomyelinase-like phosphodiesterase 3A [Homo
           sapiens]
          Length = 453

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 14/108 (12%)

Query: 212 DFTIDLKHEIALYIWDKGGGPPLTPVPEFCTN---DVDFYCATTFHSFLPLCRKPVKKKD 268
           DF  +   E +  IW  G  PP  PVPE  T+   +V     TT  S  P          
Sbjct: 93  DFIKNSGQEASFMIWT-GDSPPHVPVPELSTDTVINVITNMTTTIQSLFP-------NLQ 144

Query: 269 IFVAVKTCKKFHGDRIPIV-KQTWESQASLIEYYSDYTENSIPTVDLG 315
           +F A+     +  D++P+V  + + + A+L + + D  E +I T+  G
Sbjct: 145 VFPALGNHDYWPQDQLPVVTSKVYNAVANLWKPWLD--EEAISTLRKG 190


>gi|31791030 keratin associated protein 19-1 [Homo sapiens]
          Length = 90

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 12/18 (66%), Positives = 13/18 (72%)

Query: 378 YGYGLGTGGYSYITGGGG 395
           YGYG G GGY Y +G GG
Sbjct: 53  YGYGSGFGGYGYGSGFGG 70


>gi|31791026 keratin associated protein 19-3 [Homo sapiens]
          Length = 81

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 12/18 (66%), Positives = 13/18 (72%)

Query: 378 YGYGLGTGGYSYITGGGG 395
           YGYG G GGY Y +G GG
Sbjct: 44  YGYGSGFGGYGYGSGFGG 61


>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
          Length = 1216

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 7/141 (4%)

Query: 15  LLALLTCSLAFGLASEDTKKEVKQSQDLEKSGISRKNDIDLKGIVFVIQSQSNSFHAKRA 74
           LL  +T  +A   +S  T  +  + +  E     RK +  +K    V+ ++ N       
Sbjct: 111 LLEGVTTQVAHKKSSLQTSAKQIEDRIFEVKHQHRKVENQIKMAKMVLMNELNKQANGLI 170

Query: 75  EQLKKSILKQAADLTQELPSVLLLHQLAKQEGAWTILPLLPHFSVTYSRNSSWIFFCEEE 134
           E+L+    ++   L Q+L S+++L++  +    +    +    SV +        F +E 
Sbjct: 171 EELEGITNERKRKLEQQLQSIMVLNRQFEHVQNFINWAVCSKTSVPF-------LFSKEL 223

Query: 135 TRIQIPKLLETLRRYDPSKEW 155
              Q+ +LLET    DP   W
Sbjct: 224 IVFQMQRLLETSCNTDPGSPW 244


>gi|15619008 vacuolar protein sorting 13A isoform B [Homo sapiens]
          Length = 3095

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 436  THSPLFH---QARPVDYPKDYLSHQVPISFHKHWNIDPVKVYFTWLAPSDEDKARQETQK 492
            T   LFH   +A   +Y    L  Q  +S +++++I P+K++ +    S  ++A+   Q 
Sbjct: 2736 TEVELFHKDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLHLSVSLSSGREEAKDSKQN 2795

Query: 493  G 493
            G
Sbjct: 2796 G 2796


>gi|66346676 vacuolar protein sorting 13A isoform D [Homo sapiens]
          Length = 3069

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 436  THSPLFH---QARPVDYPKDYLSHQVPISFHKHWNIDPVKVYFTWLAPSDEDKARQETQK 492
            T   LFH   +A   +Y    L  Q  +S +++++I P+K++ +    S  ++A+   Q 
Sbjct: 2736 TEVELFHKDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLHLSVSLSSGREEAKDSKQN 2795

Query: 493  G 493
            G
Sbjct: 2796 G 2796


>gi|66346674 vacuolar protein sorting 13A isoform A [Homo sapiens]
          Length = 3174

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 436  THSPLFH---QARPVDYPKDYLSHQVPISFHKHWNIDPVKVYFTWLAPSDEDKARQETQK 492
            T   LFH   +A   +Y    L  Q  +S +++++I P+K++ +    S  ++A+   Q 
Sbjct: 2736 TEVELFHKDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLHLSVSLSSGREEAKDSKQN 2795

Query: 493  G 493
            G
Sbjct: 2796 G 2796


>gi|66346672 vacuolar protein sorting 13A isoform C [Homo sapiens]
          Length = 3135

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 436  THSPLFH---QARPVDYPKDYLSHQVPISFHKHWNIDPVKVYFTWLAPSDEDKARQETQK 492
            T   LFH   +A   +Y    L  Q  +S +++++I P+K++ +    S  ++A+   Q 
Sbjct: 2697 TEVELFHKDIEAFKEEYKTASLVDQSQVSLYEYFHISPIKLHLSVSLSSGREEAKDSKQN 2756

Query: 493  G 493
            G
Sbjct: 2757 G 2757


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,560,386
Number of Sequences: 37866
Number of extensions: 960862
Number of successful extensions: 2199
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2150
Number of HSP's gapped (non-prelim): 47
length of query: 498
length of database: 18,247,518
effective HSP length: 106
effective length of query: 392
effective length of database: 14,233,722
effective search space: 5579619024
effective search space used: 5579619024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.