Guide to the Human Genome
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Name: B3GNT9 Sequence: fasta or formatted (402aa) NCBI GI: 111160385
Description:

UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.2         57           2
 C cysteine            1.5          6           1
 D aspartate           6.0         24           2
 E glutamate           3.2         13           1
 F phenylalanine       5.7         23           2
 G glycine             9.7         39           4
 H histidine           2.7         11           1
 I isoleucine          2.5         10           1
 K lysine              1.5          6           1
 L leucine            11.9         48           3
 M methionine          0.7          3           1
 N asparagine          1.0          4           1
 P proline             9.7         39           2
 Q glutamine           3.2         13           1
 R arginine            9.7         39           3
 S serine              3.0         12           1
 T threonine           3.7         15           1
 V valine              5.7         23           3
 W tryptophan          1.7          7           1
 Y tyrosine            2.5         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra... 
B3GNT7                0.323   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT6                0.285   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltra...
B3GNT4                0.272   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT2                0.252   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans...
B3GNT3                0.248   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT8                0.179   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GNT5                0.154   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
B3GALT2               0.146   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 2 [...
B3GALT1               0.143   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALT5               0.139   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.139   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.139   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.139   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 ...
B3GALT5               0.139   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 5 [...
B3GALT4               0.124   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 4 [...
B3GALNT1              0.122   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.122   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.122   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.122   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ...
B3GALNT1              0.122   UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 [...
LOC100289720          0.088   PREDICTED: hypothetical protein XP_002347139 
LOC100288842          0.088   PREDICTED: hypothetical protein XP_002342992 
B3GALT6               0.048   beta-1,3-galactosyltransferase 6 
B3GALNT2              0.027   beta-1,3-N-acetylgalactosaminyltransferase 2 
SH2B3                 0.024   SH2B adaptor protein 3 
USP51                 0.021   ubiquitin specific protease 51 
LOC389333             0.015   hypothetical protein LOC389333 
CNOT3                 0.014   CCR4-NOT transcription complex, subunit 3 
SAMD1                 0.014   sterile alpha motif domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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