C12orf41 5594

Name: C12orf41	Sequence: fasta or formatted (492aa)		NCBI GI: 154426300
Description: hypothetical protein LOC54934		Referenced in: Small RNAs in RNA Processing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 31 2 C cysteine 3.9 19 2 D aspartate 6.1 30 2 E glutamate 7.9 39 2 F phenylalanine 2.0 10 1 G glycine 5.1 25 1 H histidine 3.3 16 1 I isoleucine 3.3 16 1 K lysine 5.7 28 2 L leucine 11.2 55 2 M methionine 2.0 10 1 N asparagine 2.8 14 1 P proline 7.7 38 2 Q glutamine 6.1 30 2 R arginine 6.9 34 2 S serine 8.5 42 2 T threonine 4.5 22 2 V valine 4.5 22 2 W tryptophan 0.4 2 1 Y tyrosine 1.8 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC54934 INO80D 0.049 INO80 complex subunit D ZC3H11A 0.010 zinc finger CCCH-type containing 11A EIF3A 0.010 eukaryotic translation initiation factor 3, subunit 1... TCHH 0.010 trichohyalin ANKRD18B 0.009 PREDICTED: ankyrin repeat domain 18B ANKRD18B 0.009 PREDICTED: ankyrin repeat domain 18B ANKRD18B 0.009 PREDICTED: ankyrin repeat domain 18B MIA3 0.009 melanoma inhibitory activity family, member 3 [Homo... ZNF296 0.008 zinc finger protein 296 SDCCAG10 0.008 serologically defined colon cancer antigen 10 KIAA1377 0.007 hypothetical protein LOC57562 SOX7 0.007 SRY-box 7 BAI1 0.007 brain-specific angiogenesis inhibitor 1 precursor [... SR140 0.007 U2-associated SR140 protein LOC100134663 0.006 PREDICTED: hypothetical protein, partial EHMT1 0.006 euchromatic histone-lysine N-methyltransferase 1 is... EHMT1 0.006 euchromatic histone-lysine N-methyltransferase 1 is... WHAMM 0.006 WAS protein homolog associated with actin, golgi me... BAZ2A 0.006 bromodomain adjacent to zinc finger domain, 2A [Homo... MKL1 0.005 megakaryoblastic leukemia 1 protein TGFBI 0.005 transforming growth factor, beta-induced, 68kDa precu... DEF6 0.005 differentially expressed in FDCP 6 homolog CELSR3 0.005 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... BAZ2B 0.005 bromodomain adjacent to zinc finger domain, 2B [Homo... PACS1 0.005 phosphofurin acidic cluster sorting protein 1 TSNAXIP1 0.005 translin-associated factor X interacting protein 1 ... CHD9 0.005 chromodomain helicase DNA binding protein 9 KIAA0947 0.005 hypothetical protein LOC23379 AMOT 0.005 angiomotin isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.