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Search of human proteins with 154426272
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
(789 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154426272 hypothetical protein LOC54540 [Homo sapiens] 1644 0.0
gi|51873049 hypothetical protein LOC8603 [Homo sapiens] 278 2e-74
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 70 1e-11
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 70 1e-11
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 70 1e-11
gi|163965366 nascent polypeptide-associated complex alpha subuni... 66 1e-10
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 64 7e-10
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 61 5e-09
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 59 1e-08
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 58 4e-08
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 57 5e-08
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 56 1e-07
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 56 1e-07
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 56 1e-07
gi|28559039 mediator complex subunit 1 [Homo sapiens] 55 3e-07
gi|150170670 piccolo isoform 2 [Homo sapiens] 55 3e-07
gi|150378539 piccolo isoform 1 [Homo sapiens] 55 3e-07
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 54 4e-07
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 54 4e-07
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 53 1e-06
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 53 1e-06
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 53 1e-06
gi|13128980 proline rich 14 [Homo sapiens] 53 1e-06
gi|241982729 trinucleotide repeat containing 6B isoform 1 [Homo ... 53 1e-06
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 52 2e-06
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 52 2e-06
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 52 2e-06
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 52 3e-06
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 52 3e-06
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 51 4e-06
>gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
Length = 789
Score = 1644 bits (4258), Expect = 0.0
Identities = 789/789 (100%), Positives = 789/789 (100%)
Query: 1 MPKLVKNLLGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGDDSHSSSS 60
MPKLVKNLLGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGDDSHSSSS
Sbjct: 1 MPKLVKNLLGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGDDSHSSSS 60
Query: 61 SSSSSSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAF 120
SSSSSSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAF
Sbjct: 61 SSSSSSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAF 120
Query: 121 PVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASEC 180
PVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASEC
Sbjct: 121 PVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASEC 180
Query: 181 PVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQP 240
PVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQP
Sbjct: 181 PVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQP 240
Query: 241 LPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRDGKFC 300
LPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRDGKFC
Sbjct: 241 LPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRDGKFC 300
Query: 301 DCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGGTLGGIPGEPAVDHRD 360
DCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGGTLGGIPGEPAVDHRD
Sbjct: 301 DCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGGTLGGIPGEPAVDHRD 360
Query: 361 VDELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLAAEALKQANRVSGSREPRPAR 420
VDELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLAAEALKQANRVSGSREPRPAR
Sbjct: 361 VDELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLAAEALKQANRVSGSREPRPAR 420
Query: 421 ERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQ 480
ERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQ
Sbjct: 421 ERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQ 480
Query: 481 SLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGP 540
SLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGP
Sbjct: 481 SLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGP 540
Query: 541 PPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGK 600
PPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGK
Sbjct: 541 PPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGK 600
Query: 601 PQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGS 660
PQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGS
Sbjct: 601 PQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGS 660
Query: 661 RGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPGPARPQSLPQGKGRSRR 720
RGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPGPARPQSLPQGKGRSRR
Sbjct: 661 RGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPGPARPQSLPQGKGRSRR 720
Query: 721 SRNKQEKPASSLDDVFLPKDMDGVEMDETDREVEYFKRFCLDSAKQTRQKVAVNWTNFSL 780
SRNKQEKPASSLDDVFLPKDMDGVEMDETDREVEYFKRFCLDSAKQTRQKVAVNWTNFSL
Sbjct: 721 SRNKQEKPASSLDDVFLPKDMDGVEMDETDREVEYFKRFCLDSAKQTRQKVAVNWTNFSL 780
Query: 781 KKTTPSTAQ 789
KKTTPSTAQ
Sbjct: 781 KKTTPSTAQ 789
>gi|51873049 hypothetical protein LOC8603 [Homo sapiens]
Length = 1224
Score = 278 bits (710), Expect = 2e-74
Identities = 246/745 (33%), Positives = 339/745 (45%), Gaps = 125/745 (16%)
Query: 60 SSSSSSSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGS-------- 111
S S +++ C N D +F+ A+K+ +S SS + +++ S
Sbjct: 581 SDSKEKKNAAKKKCLYNFQD----AFMEANKVVMATSSATSSVSCTATTVQSSNSQFRVS 636
Query: 112 ---PPTIPGEAFPVS-EHHQHSDLTAPPNSPTGHHPQPASLIPS--HPSSFGSPPHPHLL 165
PP++ +S E H+HS AP NSPTG P PA L P+ P++ PHL
Sbjct: 637 SKRPPSVGDVFHGISKEDHRHSAPAAPRNSPTGLAPLPA-LSPAALSPAALSPASTPHLA 695
Query: 166 PTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCG 225
A FP TA TPG + S C P
Sbjct: 696 -NLAAPSFPK----------TATTTPGFVDTRK---------------SFCPAPLPPATD 729
Query: 226 GHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERS 285
G S P PS DP C+GH+ + PQ + DE +EDS SE S
Sbjct: 730 GSISAP----------PSVCSDPDCEGHRCENGVYD---PQQDDGDESA--DEDSCSEHS 774
Query: 286 SCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGG 345
S TS+ST+Q++GK+CDCCYCEFFGH PPAAPTSRNY E+REKLR RLT+RKEE P K
Sbjct: 775 SSTSTSTNQKEGKYCDCCYCEFFGHGGPPAAPTSRNYAEMREKLRLRLTKRKEEQPKKMD 834
Query: 346 TLGGIPGEPAVDHRDVDELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLAAEALK 405
+ E VDHR V++LL+FINS+E K +S RAAKRARHK +K E EKA+L AEA
Sbjct: 835 QIS--ERESVVDHRRVEDLLQFINSSETKPVSSTRAAKRARHKQRKLE-EKARLEAEARA 891
Query: 406 QANRVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKN----TVKDSIRASFSVCE 461
+ + + R E E + E DR RLQE++ K R S +
Sbjct: 892 REHLHLQEEQRRREEE---EDEEEEEDRFKEEF-QRLQELQKLRAVKKKKKERPSKDCPK 947
Query: 462 LSMDSNGFSKEGAAEPEPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPA 521
L M + F + A E P S N S ++P+ + SP H +
Sbjct: 948 LDMLTRNF--QAATESVPNSGNIHNGSLEQTEEPETSSH-------SPSRHMNHSE---- 994
Query: 522 PPWAEMRGPHPPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSS 581
P PG+ + ++T + K P
Sbjct: 995 ------------------PRPGLGADGDAADPVDT----------RDSKFLLPKEVNGKQ 1026
Query: 582 KEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQP 641
E S ++ + G QK RQ S+A A PP + E S A +
Sbjct: 1027 HEPLSFFFDIMQHHKEGNGKQK-LRQTSKASSEPARRPTEPPKATEGQSKPR--AQTESK 1083
Query: 642 GRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQ 701
+V++L + + K EK + P E + + Q++ +
Sbjct: 1084 AKVVDLMSITEQKREERKVNSNNNNKKQLNHIKDEKSNPT-----PMEPTSPGEHQQNSK 1138
Query: 702 PPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPK--DMDGVEMDETDREVEYFKRF 759
PQ P+GK + + + K ++ +S+DDVFLPK D+D V+MDET+REVEYFKRF
Sbjct: 1139 LVLAESPQ--PKGKNK-KNKKKKGDRVNNSIDDVFLPKDIDLDSVDMDETEREVEYFKRF 1195
Query: 760 CLDSAKQTRQKVAVNWTNFSLKKTT 784
CLDSA+QTRQ++++NW+NFSLKK T
Sbjct: 1196 CLDSARQTRQRLSINWSNFSLKKAT 1220
Score = 36.2 bits (82), Expect = 0.12
Identities = 48/169 (28%), Positives = 63/169 (37%), Gaps = 33/169 (19%)
Query: 53 DDSHSSSSSSSSSSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSP 112
D+S SS+SSSSS + G S P A K G+ S S S SP
Sbjct: 341 DESPQISSTSSSSSEADDEEADGESSGEPP----GAPKEDGVLGS--RSPRTEESKADSP 394
Query: 113 PTIPGEAFPVSEHHQHSDLTAPPNSPTGH--HPQPASLIPSHPSSFGSPP-HPHLLPTTP 169
P ++P + Q PN+ H + + L PS ++ PP H L P P
Sbjct: 395 P----PSYPTQQAEQ------APNTCECHVCKQEASGLTPSAMTAGALPPGHQFLSPEKP 444
Query: 170 AAP----FPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFS 214
P +P P+ T PH P P P L PPF+
Sbjct: 445 THPALHLYPHIHGHVPL--HTVPHLPRP--------LIHPTLYATPPFT 483
Score = 32.3 bits (72), Expect = 1.8
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 14/118 (11%)
Query: 58 SSSSSSSSSSSSSSSCPGNSGDWDPSS---FLSAHKLSGLWNSPHSSGAMP-GSSLGSPP 113
S + S + S S P + P++ + + SGL S ++GA+P G SP
Sbjct: 383 SPRTEESKADSPPPSYPTQQAEQAPNTCECHVCKQEASGLTPSAMTAGALPPGHQFLSPE 442
Query: 114 TIPGEAFPVSEH-HQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPA 170
A + H H H L P H P+P HP+ + +PP H PA
Sbjct: 443 KPTHPALHLYPHIHGHVPLHTVP-----HLPRPLI----HPTLYATPPFTHSKALPPA 491
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 69.7 bits (169), Expect = 1e-11
Identities = 154/636 (24%), Positives = 213/636 (33%), Gaps = 141/636 (22%)
Query: 74 PGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMP-GSSLGSPPTIPGEAFPVSEHHQHSDLT 132
PG W L+ + SP S A P GS+LG P P FP S
Sbjct: 252 PGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPE-PHLTFPRS-------FK 303
Query: 133 APPNSP--TGHHP-QPASLIPSH--------PSSFGSPPHPHLLPTTPAAPFPAQASECP 181
PP +P T P Q A P PS PP H+ P + P A +CP
Sbjct: 304 VPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCP 363
Query: 182 -VAAATAPHTP----GPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPP 236
ATAP +P Q+ T P +PPP P LPPP
Sbjct: 364 GELKATAPASPRLGQSQSQADERAGTPPPAPPLPPP-----------------APPLPPP 406
Query: 237 SSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRD 296
+ PLP C K AH A P + L + + S ++ +S+ RD
Sbjct: 407 AP-PLPPAAPPLPC-AQKAAHPP-AGFTKTPKSSSPALKPKPNPPSPENTASSAPVDWRD 463
Query: 297 GKFCDCCYCE-------------FFGHN-APPAAPTSRNYTEIREKLRSRLTRRKE--EL 340
+ E F H P AP S+ K RL ++ L
Sbjct: 464 PSQMEKLRNELAAYLCGSRREDRFLSHRPGPTVAPQSKE-----GKKGPRLPEKETLLSL 518
Query: 341 PMKGGTLGGIPGEPAVDHRDVDELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLA 400
P K T G+P E ++ + E + T P V + + + + E E A+L+
Sbjct: 519 PAKD-TPPGVP-EKSLGGSSLTETEAAPSLTLPSVDYIPQDSPTPSVRQIRNELE-ARLS 575
Query: 401 AEALKQANRVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVC 460
+ A K+A GS P+P E +C
Sbjct: 576 SAAEKEAKPSIGSLPPKPRLE----------------------------------GGRIC 601
Query: 461 ELSMDSNGFSKEGAAEPEPQS---LPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAP 517
E D + SK A PQS LP ++L + P I +P P +A
Sbjct: 602 ENGADDDKLSKPVAKNLPPQSTTLLPTTSLQPKAMLGPAIPPKATPEPAIPP-----KAT 656
Query: 518 GEPAPPWAEMRGPHPPWTEVRGPPPGIVPENG--LVRRLNTVPNLSRVIWVKTPKPGYPS 575
PA P GP P GP + +G + T+P + + +
Sbjct: 657 LWPATPPKATLGPATPLKATSGPTTPLKATSGPAIASTATTLPTTTSQLMAEKDSGPAGQ 716
Query: 576 SEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQ-AKKSEASPAPRPPASLEVPS---- 630
E+P+S+EV + P G P + R +Q A+ S A P P EVP
Sbjct: 717 PEKPASQEVST-----PSQARGEGSPSEATRLPTQGARSSAAFPPKTSPGGGEVPCLYKP 771
Query: 631 ------------------AKGQVAGPKQPGRVLELP 648
A+G AGP +P V E P
Sbjct: 772 HCHQSSLSREVAVVMPTLARGGAAGPGEPVEVKEPP 807
Score = 41.6 bits (96), Expect = 0.003
Identities = 64/253 (25%), Positives = 82/253 (32%), Gaps = 26/253 (10%)
Query: 470 SKEGAAEPEPQSL--PPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEM 527
S A P P L PP S + P + P TL SP T PAPP A +
Sbjct: 165 SPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFL 224
Query: 528 RGPHPPWTEVRGPPPG--------IVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEP 579
P PP P P + P G+ + + V R P +E
Sbjct: 225 APPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPK 284
Query: 580 SSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPK 639
S P+ + L P S P R S EA APR K + A K
Sbjct: 285 GSALGPNPEPHLTFPRSFKVPPPTPVRT-SSIPVQEAQEAPR----------KEEGATKK 333
Query: 640 QPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQES 699
P R L LP A + P P G K G+++++ E+
Sbjct: 334 APSR-LPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRL----GQSQSQADERAG 388
Query: 700 VQPPGPARPQSLP 712
PP P P P
Sbjct: 389 TPPPAPPLPPPAP 401
Score = 37.4 bits (85), Expect = 0.055
Identities = 117/542 (21%), Positives = 173/542 (31%), Gaps = 107/542 (19%)
Query: 106 GSSLGSPPTIPGEA----FPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPH 161
G L PP PG A +SE S L +PP+ T P P L P P S PP
Sbjct: 134 GQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPS--TAPPPPPLLLEPPPPPSMAPPPP 191
Query: 162 PHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCS 221
P L +P PHT S P + PP F + P +
Sbjct: 192 PVLEALSP------------------PHT-----------LSSPSIPTPPDFIPPAPPLA 222
Query: 222 GHCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSS 281
+ P PPP P P P G + G + + E +S
Sbjct: 223 -----FLAPP--PPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRAS 275
Query: 282 SERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELP 341
RS + + F PP P + ++E ++ RKEE
Sbjct: 276 PPRSPAEPKGSALGPNPEPHLTFPRSF--KVPPPTPVRTSSIPVQE---AQEAPRKEEGA 330
Query: 342 MKGGTLGGIPGEPAVDHRDVDELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLAA 401
K +P P+ R ++ + EP P +A A +L
Sbjct: 331 TKKAP-SRLPLPPSFHIRPASQVYP-DRAPEPDCPGELKATAPASPRL-----------G 377
Query: 402 EALKQANRVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCE 461
++ QA+ +G+ P P L P L L + K + +
Sbjct: 378 QSQSQADERAGTPPPAPP----LPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPA----- 428
Query: 462 LSMDSNGFSKEGAAEPEPQSLPPSNLSGSS-------EQQPDINLDLSPLTLGSPQNHTL 514
S A +P+P P N + S+ Q + +L+ GS +
Sbjct: 429 -GFTKTPKSSSPALKPKPNPPSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRF 487
Query: 515 --QAPGEPAPPWAE--MRGPHPPWTE------VRGPPPGIVPENGL----VRRLNTVPNL 560
PG P ++ +GP P E + PPG VPE L + P+L
Sbjct: 488 LSHRPGPTVAPQSKEGKKGPRLPEKETLLSLPAKDTPPG-VPEKSLGGSSLTETEAAPSL 546
Query: 561 SRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAP 620
+ P Y + P + V + EL +SS + +AK S S P
Sbjct: 547 T------LPSVDYIPQDSP-TPSVRQIRNELEARLSSAAE--------KEAKPSIGSLPP 591
Query: 621 RP 622
+P
Sbjct: 592 KP 593
Score = 33.9 bits (76), Expect = 0.60
Identities = 55/248 (22%), Positives = 82/248 (33%), Gaps = 30/248 (12%)
Query: 507 GSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWV 566
G PQ+ + G P P P PP PPP + P V + P+ +
Sbjct: 149 GPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSI 208
Query: 567 KTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKR----------------QGSQ 610
TP P + + P P P + G R G Q
Sbjct: 209 PTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQ 268
Query: 611 AKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWA 670
A+ + ASP PR PA KG GP P L P+ S P
Sbjct: 269 AEATRASP-PRSPA-----EPKGSALGP-NPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQ 321
Query: 671 GSPKTEK---EKGSSWRNWPGEAKARPQEQ----ESVQPPGPARPQSLPQGKGRSRRSRN 723
+P+ E+ +K S P RP Q + +P P ++ R +S++
Sbjct: 322 EAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQS 381
Query: 724 KQEKPASS 731
+ ++ A +
Sbjct: 382 QADERAGT 389
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 69.7 bits (169), Expect = 1e-11
Identities = 154/636 (24%), Positives = 213/636 (33%), Gaps = 141/636 (22%)
Query: 74 PGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMP-GSSLGSPPTIPGEAFPVSEHHQHSDLT 132
PG W L+ + SP S A P GS+LG P P FP S
Sbjct: 252 PGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPE-PHLTFPRS-------FK 303
Query: 133 APPNSP--TGHHP-QPASLIPSH--------PSSFGSPPHPHLLPTTPAAPFPAQASECP 181
PP +P T P Q A P PS PP H+ P + P A +CP
Sbjct: 304 VPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCP 363
Query: 182 -VAAATAPHTP----GPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPP 236
ATAP +P Q+ T P +PPP P LPPP
Sbjct: 364 GELKATAPASPRLGQSQSQADERAGTPPPAPPLPPP-----------------APPLPPP 406
Query: 237 SSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRD 296
+ PLP C K AH A P + L + + S ++ +S+ RD
Sbjct: 407 AP-PLPPAAPPLPC-AQKAAHPP-AGFTKTPKSSSPALKPKPNPPSPENTASSAPVDWRD 463
Query: 297 GKFCDCCYCE-------------FFGHN-APPAAPTSRNYTEIREKLRSRLTRRKE--EL 340
+ E F H P AP S+ K RL ++ L
Sbjct: 464 PSQMEKLRNELAAYLCGSRREDRFLSHRPGPTVAPQSKE-----GKKGPRLPEKETLLSL 518
Query: 341 PMKGGTLGGIPGEPAVDHRDVDELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLA 400
P K T G+P E ++ + E + T P V + + + + E E A+L+
Sbjct: 519 PAKD-TPPGVP-EKSLGGSSLTETEAAPSLTLPSVDYIPQDSPTPSVRQIRNELE-ARLS 575
Query: 401 AEALKQANRVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVC 460
+ A K+A GS P+P E +C
Sbjct: 576 SAAEKEAKPSIGSLPPKPRLE----------------------------------GGRIC 601
Query: 461 ELSMDSNGFSKEGAAEPEPQS---LPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAP 517
E D + SK A PQS LP ++L + P I +P P +A
Sbjct: 602 ENGADDDKLSKPVAKNLPPQSTTLLPTTSLQPKAMLGPAIPPKATPEPAIPP-----KAT 656
Query: 518 GEPAPPWAEMRGPHPPWTEVRGPPPGIVPENG--LVRRLNTVPNLSRVIWVKTPKPGYPS 575
PA P GP P GP + +G + T+P + + +
Sbjct: 657 LWPATPPKATLGPATPLKATSGPTTPLKATSGPAIASTATTLPTTTSQLMAEKDSGPAGQ 716
Query: 576 SEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQ-AKKSEASPAPRPPASLEVPS---- 630
E+P+S+EV + P G P + R +Q A+ S A P P EVP
Sbjct: 717 PEKPASQEVST-----PSQARGEGSPSEATRLPTQGARSSAAFPPKTSPGGGEVPCLYKP 771
Query: 631 ------------------AKGQVAGPKQPGRVLELP 648
A+G AGP +P V E P
Sbjct: 772 HCHQSSLSREVAVVMPTLARGGAAGPGEPVEVKEPP 807
Score = 41.6 bits (96), Expect = 0.003
Identities = 64/253 (25%), Positives = 82/253 (32%), Gaps = 26/253 (10%)
Query: 470 SKEGAAEPEPQSL--PPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEM 527
S A P P L PP S + P + P TL SP T PAPP A +
Sbjct: 165 SPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFL 224
Query: 528 RGPHPPWTEVRGPPPG--------IVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEP 579
P PP P P + P G+ + + V R P +E
Sbjct: 225 APPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPK 284
Query: 580 SSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPK 639
S P+ + L P S P R S EA APR K + A K
Sbjct: 285 GSALGPNPEPHLTFPRSFKVPPPTPVRT-SSIPVQEAQEAPR----------KEEGATKK 333
Query: 640 QPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQES 699
P R L LP A + P P G K G+++++ E+
Sbjct: 334 APSR-LPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRL----GQSQSQADERAG 388
Query: 700 VQPPGPARPQSLP 712
PP P P P
Sbjct: 389 TPPPAPPLPPPAP 401
Score = 37.4 bits (85), Expect = 0.055
Identities = 117/542 (21%), Positives = 173/542 (31%), Gaps = 107/542 (19%)
Query: 106 GSSLGSPPTIPGEA----FPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPH 161
G L PP PG A +SE S L +PP+ T P P L P P S PP
Sbjct: 134 GQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPS--TAPPPPPLLLEPPPPPSMAPPPP 191
Query: 162 PHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCS 221
P L +P PHT S P + PP F + P +
Sbjct: 192 PVLEALSP------------------PHT-----------LSSPSIPTPPDFIPPAPPLA 222
Query: 222 GHCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSS 281
+ P PPP P P P G + G + + E +S
Sbjct: 223 -----FLAPP--PPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRAS 275
Query: 282 SERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELP 341
RS + + F PP P + ++E ++ RKEE
Sbjct: 276 PPRSPAEPKGSALGPNPEPHLTFPRSF--KVPPPTPVRTSSIPVQE---AQEAPRKEEGA 330
Query: 342 MKGGTLGGIPGEPAVDHRDVDELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLAA 401
K +P P+ R ++ + EP P +A A +L
Sbjct: 331 TKKAP-SRLPLPPSFHIRPASQVYP-DRAPEPDCPGELKATAPASPRL-----------G 377
Query: 402 EALKQANRVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCE 461
++ QA+ +G+ P P L P L L + K + +
Sbjct: 378 QSQSQADERAGTPPPAPP----LPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPA----- 428
Query: 462 LSMDSNGFSKEGAAEPEPQSLPPSNLSGSS-------EQQPDINLDLSPLTLGSPQNHTL 514
S A +P+P P N + S+ Q + +L+ GS +
Sbjct: 429 -GFTKTPKSSSPALKPKPNPPSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRF 487
Query: 515 --QAPGEPAPPWAE--MRGPHPPWTE------VRGPPPGIVPENGL----VRRLNTVPNL 560
PG P ++ +GP P E + PPG VPE L + P+L
Sbjct: 488 LSHRPGPTVAPQSKEGKKGPRLPEKETLLSLPAKDTPPG-VPEKSLGGSSLTETEAAPSL 546
Query: 561 SRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAP 620
+ P Y + P + V + EL +SS + +AK S S P
Sbjct: 547 T------LPSVDYIPQDSP-TPSVRQIRNELEARLSSAAE--------KEAKPSIGSLPP 591
Query: 621 RP 622
+P
Sbjct: 592 KP 593
Score = 33.9 bits (76), Expect = 0.60
Identities = 55/248 (22%), Positives = 82/248 (33%), Gaps = 30/248 (12%)
Query: 507 GSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWV 566
G PQ+ + G P P P PP PPP + P V + P+ +
Sbjct: 149 GPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSI 208
Query: 567 KTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKR----------------QGSQ 610
TP P + + P P P + G R G Q
Sbjct: 209 PTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQ 268
Query: 611 AKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWA 670
A+ + ASP PR PA KG GP P L P+ S P
Sbjct: 269 AEATRASP-PRSPA-----EPKGSALGP-NPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQ 321
Query: 671 GSPKTEK---EKGSSWRNWPGEAKARPQEQ----ESVQPPGPARPQSLPQGKGRSRRSRN 723
+P+ E+ +K S P RP Q + +P P ++ R +S++
Sbjct: 322 EAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQS 381
Query: 724 KQEKPASS 731
+ ++ A +
Sbjct: 382 QADERAGT 389
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 69.7 bits (169), Expect = 1e-11
Identities = 154/636 (24%), Positives = 213/636 (33%), Gaps = 141/636 (22%)
Query: 74 PGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMP-GSSLGSPPTIPGEAFPVSEHHQHSDLT 132
PG W L+ + SP S A P GS+LG P P FP S
Sbjct: 252 PGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPE-PHLTFPRS-------FK 303
Query: 133 APPNSP--TGHHP-QPASLIPSH--------PSSFGSPPHPHLLPTTPAAPFPAQASECP 181
PP +P T P Q A P PS PP H+ P + P A +CP
Sbjct: 304 VPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCP 363
Query: 182 -VAAATAPHTP----GPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPP 236
ATAP +P Q+ T P +PPP P LPPP
Sbjct: 364 GELKATAPASPRLGQSQSQADERAGTPPPAPPLPPP-----------------APPLPPP 406
Query: 237 SSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQRD 296
+ PLP C K AH A P + L + + S ++ +S+ RD
Sbjct: 407 AP-PLPPAAPPLPC-AQKAAHPP-AGFTKTPKSSSPALKPKPNPPSPENTASSAPVDWRD 463
Query: 297 GKFCDCCYCE-------------FFGHN-APPAAPTSRNYTEIREKLRSRLTRRKE--EL 340
+ E F H P AP S+ K RL ++ L
Sbjct: 464 PSQMEKLRNELAAYLCGSRREDRFLSHRPGPTVAPQSKE-----GKKGPRLPEKETLLSL 518
Query: 341 PMKGGTLGGIPGEPAVDHRDVDELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLA 400
P K T G+P E ++ + E + T P V + + + + E E A+L+
Sbjct: 519 PAKD-TPPGVP-EKSLGGSSLTETEAAPSLTLPSVDYIPQDSPTPSVRQIRNELE-ARLS 575
Query: 401 AEALKQANRVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVC 460
+ A K+A GS P+P E +C
Sbjct: 576 SAAEKEAKPSIGSLPPKPRLE----------------------------------GGRIC 601
Query: 461 ELSMDSNGFSKEGAAEPEPQS---LPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAP 517
E D + SK A PQS LP ++L + P I +P P +A
Sbjct: 602 ENGADDDKLSKPVAKNLPPQSTTLLPTTSLQPKAMLGPAIPPKATPEPAIPP-----KAT 656
Query: 518 GEPAPPWAEMRGPHPPWTEVRGPPPGIVPENG--LVRRLNTVPNLSRVIWVKTPKPGYPS 575
PA P GP P GP + +G + T+P + + +
Sbjct: 657 LWPATPPKATLGPATPLKATSGPTTPLKATSGPAIASTATTLPTTTSQLMAEKDSGPAGQ 716
Query: 576 SEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQ-AKKSEASPAPRPPASLEVPS---- 630
E+P+S+EV + P G P + R +Q A+ S A P P EVP
Sbjct: 717 PEKPASQEVST-----PSQARGEGSPSEATRLPTQGARSSAAFPPKTSPGGGEVPCLYKP 771
Query: 631 ------------------AKGQVAGPKQPGRVLELP 648
A+G AGP +P V E P
Sbjct: 772 HCHQSSLSREVAVVMPTLARGGAAGPGEPVEVKEPP 807
Score = 41.6 bits (96), Expect = 0.003
Identities = 64/253 (25%), Positives = 82/253 (32%), Gaps = 26/253 (10%)
Query: 470 SKEGAAEPEPQSL--PPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEM 527
S A P P L PP S + P + P TL SP T PAPP A +
Sbjct: 165 SPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFL 224
Query: 528 RGPHPPWTEVRGPPPG--------IVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEP 579
P PP P P + P G+ + + V R P +E
Sbjct: 225 APPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPK 284
Query: 580 SSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPK 639
S P+ + L P S P R S EA APR K + A K
Sbjct: 285 GSALGPNPEPHLTFPRSFKVPPPTPVRT-SSIPVQEAQEAPR----------KEEGATKK 333
Query: 640 QPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQES 699
P R L LP A + P P G K G+++++ E+
Sbjct: 334 APSR-LPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRL----GQSQSQADERAG 388
Query: 700 VQPPGPARPQSLP 712
PP P P P
Sbjct: 389 TPPPAPPLPPPAP 401
Score = 37.4 bits (85), Expect = 0.055
Identities = 117/542 (21%), Positives = 173/542 (31%), Gaps = 107/542 (19%)
Query: 106 GSSLGSPPTIPGEA----FPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPH 161
G L PP PG A +SE S L +PP+ T P P L P P S PP
Sbjct: 134 GQDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPS--TAPPPPPLLLEPPPPPSMAPPPP 191
Query: 162 PHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCS 221
P L +P PHT S P + PP F + P +
Sbjct: 192 PVLEALSP------------------PHT-----------LSSPSIPTPPDFIPPAPPLA 222
Query: 222 GHCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSS 281
+ P PPP P P P G + G + + E +S
Sbjct: 223 -----FLAPP--PPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRAS 275
Query: 282 SERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELP 341
RS + + F PP P + ++E ++ RKEE
Sbjct: 276 PPRSPAEPKGSALGPNPEPHLTFPRSF--KVPPPTPVRTSSIPVQE---AQEAPRKEEGA 330
Query: 342 MKGGTLGGIPGEPAVDHRDVDELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLAA 401
K +P P+ R ++ + EP P +A A +L
Sbjct: 331 TKKAP-SRLPLPPSFHIRPASQVYP-DRAPEPDCPGELKATAPASPRL-----------G 377
Query: 402 EALKQANRVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCE 461
++ QA+ +G+ P P L P L L + K + +
Sbjct: 378 QSQSQADERAGTPPPAPP----LPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPPA----- 428
Query: 462 LSMDSNGFSKEGAAEPEPQSLPPSNLSGSS-------EQQPDINLDLSPLTLGSPQNHTL 514
S A +P+P P N + S+ Q + +L+ GS +
Sbjct: 429 -GFTKTPKSSSPALKPKPNPPSPENTASSAPVDWRDPSQMEKLRNELAAYLCGSRREDRF 487
Query: 515 --QAPGEPAPPWAE--MRGPHPPWTE------VRGPPPGIVPENGL----VRRLNTVPNL 560
PG P ++ +GP P E + PPG VPE L + P+L
Sbjct: 488 LSHRPGPTVAPQSKEGKKGPRLPEKETLLSLPAKDTPPG-VPEKSLGGSSLTETEAAPSL 546
Query: 561 SRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAP 620
+ P Y + P + V + EL +SS + +AK S S P
Sbjct: 547 T------LPSVDYIPQDSP-TPSVRQIRNELEARLSSAAE--------KEAKPSIGSLPP 591
Query: 621 RP 622
+P
Sbjct: 592 KP 593
Score = 33.9 bits (76), Expect = 0.60
Identities = 55/248 (22%), Positives = 82/248 (33%), Gaps = 30/248 (12%)
Query: 507 GSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWV 566
G PQ+ + G P P P PP PPP + P V + P+ +
Sbjct: 149 GPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSI 208
Query: 567 KTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKR----------------QGSQ 610
TP P + + P P P + G R G Q
Sbjct: 209 PTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQ 268
Query: 611 AKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWA 670
A+ + ASP PR PA KG GP P L P+ S P
Sbjct: 269 AEATRASP-PRSPA-----EPKGSALGP-NPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQ 321
Query: 671 GSPKTEK---EKGSSWRNWPGEAKARPQEQ----ESVQPPGPARPQSLPQGKGRSRRSRN 723
+P+ E+ +K S P RP Q + +P P ++ R +S++
Sbjct: 322 EAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQS 381
Query: 724 KQEKPASS 731
+ ++ A +
Sbjct: 382 QADERAGT 389
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 65.9 bits (159), Expect = 1e-10
Identities = 166/728 (22%), Positives = 231/728 (31%), Gaps = 92/728 (12%)
Query: 82 PSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTAPPNSPTGH 141
P L+ G +P ++ P L +PP P + A P SP G
Sbjct: 1136 PKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATP-SPKGA 1194
Query: 142 HPQPASLIPSH------PSSFGSPPHPHLLPTTP----AAPFPAQASECPVAAATAPH-- 189
PA+ PS PS G+P P P +P A P P A P A +P
Sbjct: 1195 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1254
Query: 190 --TPGPCQSSHLPSTSMPLLK---MPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQPLPST 244
TP P + P+ + P LK PP G +P GP PP P P
Sbjct: 1255 PATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPA 1314
Query: 245 HRDPGCKGH------KFAHSGLACQLPQ-------PCEADEGLGEEEDSSSERSSCTSSS 291
P KG K A + A P P G SS+ ++
Sbjct: 1315 ATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAA 1374
Query: 292 THQRDGKFCDCCYCEFFGH--NAPPAAPTSRNYTEIREKL--RSRLTRRKEELPMKGG-- 345
T G G +P PTS + K + +TR P KG
Sbjct: 1375 TPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLT 1434
Query: 346 -------TLGGIP------GEPAVDHRDVDELLEFINSTEPKVPNSARAAKRARHKLKKK 392
+L P G PA D L + PK P + + + KK
Sbjct: 1435 PPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSP-KKA 1493
Query: 393 EKEKAQLAAEALKQANRVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDS 452
A + A L S P R R+ + L S+ K++
Sbjct: 1494 PATPAPMGAPTLPAVIPSSPKEVPATPSSR------RDPIAPTATLLSKKTPATLAPKEA 1547
Query: 453 IRASFSVCELSMDSNGFSKEGAAEPEPQS----LPPSNLSGSSEQQPDINLDLSPLTLGS 508
+ + A P S PP+ + + P L P + S
Sbjct: 1548 LIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTS 1607
Query: 509 PQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKT 568
P P PP E +GP P + P + P + L P + K
Sbjct: 1608 PSPKEAPTPPAVTPPSPE-KGPATPAPKGTPTSPPVTPSS-----LKDSPTSPASVTCKM 1661
Query: 569 PKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKP--QKGKRQGSQAKKSEASPAPRPPASL 626
+S+ +K+ P+ +E+ + P R+G Q KKS A+ P P
Sbjct: 1662 GATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPD-- 1719
Query: 627 EVPSAKGQVAGPKQ---PGRVLELPKVGSCAEAGEGSRGSRPGP-----GWAGSPKT--- 675
PSAK GP P +L + K S G+ + S GP A +P T
Sbjct: 1720 --PSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAA 1777
Query: 676 -----EKEKGSSWRNWPGEAKARPQEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPAS 730
K + +S P + P V P P + Q LP G S +K PA
Sbjct: 1778 FEKVLPKPESASVSAAPSPPVSLPLAPSPV-PTLPPKQQFLPSSPGLVLESPSKPLAPAD 1836
Query: 731 SLDDVFLP 738
+D LP
Sbjct: 1837 --EDELLP 1842
Score = 51.2 bits (121), Expect = 4e-06
Identities = 60/232 (25%), Positives = 77/232 (33%), Gaps = 43/232 (18%)
Query: 61 SSSSSSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAF 120
+++ S + P G P + GL PH P + +PP+ G
Sbjct: 1084 AATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGA--PTTPAATPPSPKG--- 1138
Query: 121 PVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAA--------- 171
L PP P G PA+ PS +PP P PTTPAA
Sbjct: 1139 ---------GLATPP--PKGAPTTPAATPPSPKGGLATPP-PKGAPTTPAATPPSPKGGL 1186
Query: 172 --PFPAQASECPVAAATAPH----TPGPCQSSHLPSTSMPL----LKMPPPFSGCSHPCS 221
P P A P A +P TP P + P+ + P L P P + P +
Sbjct: 1187 ATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1246
Query: 222 GHCGGHCSGPLLPPPSSQPLPSTHRDPGCKG------HKFAHSGLACQLPQP 267
GP PPP P P P KG HK A + P P
Sbjct: 1247 TPPSPK-GGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSP 1297
Score = 42.7 bits (99), Expect = 0.001
Identities = 49/180 (27%), Positives = 59/180 (32%), Gaps = 27/180 (15%)
Query: 97 SPHSSGAMPGSSLGSPPTIPGEAFP----VSEHHQHSDLTAPPNSPTGHHPQPASLIPSH 152
+P A P S G P T + P V+ A P P G PA+ PS
Sbjct: 985 APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATP-FPKGASTPPAATPPSP 1043
Query: 153 PSSFGSPPHPHLLPTTPAAPFPA--------QASECPVAAATAPHTP--GPCQSSHLPST 202
S + P P PTTPAA P+ P A P +P GP S +
Sbjct: 1044 KGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAP 1103
Query: 203 SMPLLKMPPPFSGCSHPCSGHCGGHCS----------GPLLPPPSSQPLPSTHRDPGCKG 252
P P P G + P H G + G PPP P P KG
Sbjct: 1104 MPPAATPPSPKGGLATP--PHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG 1161
Score = 42.4 bits (98), Expect = 0.002
Identities = 59/234 (25%), Positives = 79/234 (33%), Gaps = 34/234 (14%)
Query: 41 LSHTSCKSQSCGDDSHSSSSSSSSSSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHS 100
+SHTS + + S +S+++SS D PS L P
Sbjct: 754 ISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLAD-SPSP-LGVSVSPQTKRPPTK 811
Query: 101 SG-AMPGSSLG--SPPTIPGEAFPVSEH----HQHSDLTAPPNSPTGHHPQ----PASLI 149
G A P + +G S P P EA + E+ D A +SPT P+ P+++
Sbjct: 812 KGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVT 871
Query: 150 PSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLK- 208
P P PP P+ PFP + P TP P Q+ L TS K
Sbjct: 872 PLSPKGVTLPPKETPTPSVVNLPFPKE----------GPATPAPKQAPALSMTSSSPKKA 921
Query: 209 ----------MPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQPLPSTHRDPGCKG 252
P G P + GP P P P P P KG
Sbjct: 922 RATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKG 975
Score = 41.6 bits (96), Expect = 0.003
Identities = 70/267 (26%), Positives = 93/267 (34%), Gaps = 43/267 (16%)
Query: 472 EGAAEPEPQSLPPSNLSGSSEQQPDINLDLSPL-TLGSPQNH--TLQAPGEPAPPWAE-- 526
+GA+ P P + PPS + +P TL SP+ T G P PP A
Sbjct: 1030 KGASTP-PAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPP 1088
Query: 527 --MRGPHPPWTEVRGPPPGIVP---ENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSS 581
GP P + PP P + GL + + +PK G + P
Sbjct: 1089 SPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLAT---PPP 1145
Query: 582 KEVPSCKQELPEPVSSGG---KPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGP 638
K P+ P P GG P KG A + A+ P P L PS KG P
Sbjct: 1146 KGAPTTPAATP-PSPKGGLATPPPKG------APTTPAATPPSPKGGLATPSPKG---AP 1195
Query: 639 KQPGRVLELPKVGSCAEAGEGS-----------RGSRPGPGWAGSPKTEKEKGSSWRNWP 687
P PK G + +G+ +G P G+P T S + P
Sbjct: 1196 TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGP 1255
Query: 688 GEAKARPQEQESVQPPGPARPQSLPQG 714
A P + + PP A P SL G
Sbjct: 1256 ----ATPPPKGAPTPPA-ATPPSLKGG 1277
Score = 36.6 bits (83), Expect = 0.093
Identities = 49/176 (27%), Positives = 65/176 (36%), Gaps = 21/176 (11%)
Query: 106 GSSLGSPPTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSH--PSSFGSP--PH 161
G + +P P + S + AP P P+ A P+ PS G P P
Sbjct: 899 GPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPS 958
Query: 162 PHLLPTTPAAPFPA----QASECPVAAATAP-HTP-----GPCQSSHLPSTSMPLLKMPP 211
P PT PAA P+ A+ P A T P TP GP S + + P + P
Sbjct: 959 PKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPS 1018
Query: 212 PFSGCSHPCSGHCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQP 267
P S + G + P PPS + P+ P K A + A LP P
Sbjct: 1019 PKG--SPAATPFPKGASTPPAATPPSPKGSPAATPLP-----KGAPTTPAATLPSP 1067
Score = 35.0 bits (79), Expect = 0.27
Identities = 56/255 (21%), Positives = 86/255 (33%), Gaps = 37/255 (14%)
Query: 464 MDSNGFSKEGAAEPEPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPP 523
+ N S +G+ + + P+ S P S +T SP+ TL P P
Sbjct: 836 LPENSLSFQGSKDSPATTHSPTPPSPKGAPTP------SAVTPLSPKGVTLPPKETPTPS 889
Query: 524 WAEMRGPHPPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKP-GYPSSEEPSSK 582
+ P GP + + ++ P +R TP P G P+S P
Sbjct: 890 VVNLPFPK------EGPATPAPKQAPALSMTSSSPKKARA----TPAPKGIPASPSPKGA 939
Query: 583 EVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPG 642
P P ++ P+ G S K + PA PP+ P+ P P
Sbjct: 940 PTP--------PAATPPSPKGGPATPSP-KWAPTPPAATPPSPKGGPATPSPKGAPTPPA 990
Query: 643 RVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQP 702
PK G + +G+ P P P + ++ +P A P + P
Sbjct: 991 ATPPSPKGGPATPSPKGA----PTPPAVTPPSPKGSPAAT--PFPKGASTPP----AATP 1040
Query: 703 PGP-ARPQSLPQGKG 716
P P P + P KG
Sbjct: 1041 PSPKGSPAATPLPKG 1055
Score = 30.8 bits (68), Expect = 5.1
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 24/96 (25%)
Query: 98 PHSSGAMPGSSLGSP-PTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSF 156
P SS ++LG P PT+P PP SP PQ L ++ +S
Sbjct: 27 PMSSALSVTAALGQPGPTLP-----------------PPCSPA---PQQCPLSAANQAS- 65
Query: 157 GSPPHPHLLPTTPA-APFPAQASECPVAAATAPHTP 191
P P + +TP PFP +S + TAP P
Sbjct: 66 -PFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAP 100
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 63.5 bits (153), Expect = 7e-10
Identities = 80/300 (26%), Positives = 106/300 (35%), Gaps = 58/300 (19%)
Query: 468 GFSKEGAAEP-EPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQA---PGEPAPP 523
G +G P +PQ PP S + P G PQ Q P P PP
Sbjct: 86 GNKPQGPPPPGKPQGPPPQGDKSRSPRSPP----------GKPQGPPPQGGNQPQGPPPP 135
Query: 524 WAEMRGPHPPW-TEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSK 582
+ +GP P + +GPPP P+ G + + SR K P +P
Sbjct: 136 PGKPQGPPPQGGNKPQGPPPPGKPQ-GPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGP 194
Query: 583 EVPSCKQELPEPVSSG--------GKPQKGKRQGSQAKKSEASPA--------------- 619
P K + P P GKPQ QG +S SP
Sbjct: 195 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQ 254
Query: 620 --PRPPASLEVPSAKG--QVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKT 675
P PP + P +G + GP PG+ P G G SR SR PG P+
Sbjct: 255 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG-----GSKSRSSRSPPG---KPQG 306
Query: 676 EKEKGSSWRNWPGEAKARPQE------QESVQPPGPARPQS-LPQGKGRSRRSRNKQEKP 728
+G + P +PQ + PP P +PQ PQG +SR +R+ KP
Sbjct: 307 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKP 366
Score = 63.2 bits (152), Expect = 9e-10
Identities = 72/254 (28%), Positives = 87/254 (34%), Gaps = 42/254 (16%)
Query: 479 PQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQA---PGEPAPPWAEMRGPHPPW- 534
PQ PP G+ Q P P G PQ Q P P PP + +GP P
Sbjct: 36 PQGAPPQG--GNKPQGP-------PSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG 86
Query: 535 TEVRGPPP-----GIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQ 589
+ +GPPP G P+ R + P K P +P P K
Sbjct: 87 NKPQGPPPPGKPQGPPPQGDKSRSPRSPPG-------KPQGPPPQGGNQPQGPPPPPGKP 139
Query: 590 ELPEPVSSG--------GKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQP 641
+ P P GKPQ QG +S SP +P P Q GP P
Sbjct: 140 QGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGP--PPQGGNQPQGPPPP 197
Query: 642 -GRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESV 700
G+ P G G G GP P K S R+ PG+ + P Q
Sbjct: 198 PGKPQGPPPQGGNKPQGPPPPGKPQGP-----PPQGDNKSQSARSPPGKPQG-PPPQGGN 251
Query: 701 QPPGPARPQSLPQG 714
QP GP P PQG
Sbjct: 252 QPQGPPPPPGKPQG 265
Score = 58.5 bits (140), Expect = 2e-08
Identities = 71/273 (26%), Positives = 97/273 (35%), Gaps = 39/273 (14%)
Query: 478 EPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQA---PGEPAPPWAEMRGPHPPW 534
+PQ PP Q D S G PQ Q P P PP + +GP P
Sbjct: 149 KPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 208
Query: 535 -TEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPE 593
+ +GPPP P+ G + + +R K P +P P K + P
Sbjct: 209 GNKPQGPPPPGKPQ-GPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 267
Query: 594 PVSSG--------GKPQKGKRQGSQAKKSEASPA-----------------PRPPASLEV 628
P GKPQ QG +S SP P PP +
Sbjct: 268 PQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 327
Query: 629 PSAKG--QVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNW 686
P +G + GP PG+ P G G SR +R PG P +++G++ +
Sbjct: 328 PPPQGGNKPQGPPPPGKPQGPPPQG-----GSKSRSARSPPGKPQGPP--QQEGNNPQGP 380
Query: 687 PGEAKARPQEQESVQPPGPARPQSLPQGKGRSR 719
P A PQ+ ++ P P PQG SR
Sbjct: 381 PPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSR 413
Score = 50.1 bits (118), Expect = 8e-06
Identities = 49/170 (28%), Positives = 65/170 (38%), Gaps = 26/170 (15%)
Query: 576 SEEPSSKEVPSCKQELPE--PVSSGGKPQ-----KGKRQGSQAKKSEASPAPRPPASLEV 628
+E+ S +E PS P+ P G KPQ GK QG + P PP
Sbjct: 20 NEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 79
Query: 629 ---PSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRN 685
P + GP PG+ P G+ SR R PG P+ +G +
Sbjct: 80 GPPPQGGNKPQGPPPPGKPQGPPP------QGDKSRSPRSPPG---KPQGPPPQGGNQPQ 130
Query: 686 WPGEAKARPQE------QESVQPPGPARPQSLP-QGKGRSRRSRNKQEKP 728
P +PQ + PP P +PQ P QG +SR SR+ KP
Sbjct: 131 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKP 180
Score = 35.4 bits (80), Expect = 0.21
Identities = 43/163 (26%), Positives = 57/163 (34%), Gaps = 34/163 (20%)
Query: 468 GFSKEGAAEP-EPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAE 526
G +G P +PQ PP S S + P G Q P P PP +
Sbjct: 271 GNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQ------PQGPPPPPGK 324
Query: 527 MRGPHPPW-TEVRGPPP-----GIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPS 580
+GP P + +GPPP G P+ G R P KP P +E +
Sbjct: 325 PQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSP---------PGKPQGPPQQEGN 375
Query: 581 SKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPP 623
+ + P P +GG PQ Q + PRPP
Sbjct: 376 NPQGP--------PPPAGGNPQ----QPQAPPAGQPQGPPRPP 406
Score = 33.5 bits (75), Expect = 0.79
Identities = 46/178 (25%), Positives = 55/178 (30%), Gaps = 26/178 (14%)
Query: 96 NSPHSSGAMPGSSLGSPPT---------IPG--EAFPVSEHHQHSDLTAPPNSPTGHHP- 143
N P PG G PP PG + P ++ +PP P G P
Sbjct: 127 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQ 186
Query: 144 ---QPASLIPSHPSSFGSPPHPHLLPTTPAAPF-----PAQASECPVAAATAPHTP--GP 193
QP P G PP P P P P Q +A + P P P
Sbjct: 187 GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPP 246
Query: 194 CQSSHLPSTSMPLLKMP--PPFSGCSHPCSGHCGGHCSGPLLPPPSSQPLPSTHRDPG 249
Q + P P P PP G + P G GP PP S+ PG
Sbjct: 247 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP--PPQGGSKSRSSRSPPG 302
Score = 33.1 bits (74), Expect = 1.0
Identities = 38/145 (26%), Positives = 45/145 (31%), Gaps = 21/145 (14%)
Query: 98 PHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFG 157
P G S SPP P + P +Q PP P G PQ + P P G
Sbjct: 286 PPPQGGSKSRSSRSPPGKP-QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK-PQGPPPPG 343
Query: 158 SPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPG--PCQSSHLPSTSMPLLKMPPPFSG 215
P P P Q +A + P P P Q + P PPP G
Sbjct: 344 KPQGP-----------PPQGGSKSRSARSPPGKPQGPPQQEGNNPQGP------PPPAGG 386
Query: 216 CSHPCSGHCGGHCSGPLLPPPSSQP 240
G GP PP +P
Sbjct: 387 NPQQPQAPPAGQPQGPPRPPQGGRP 411
Score = 32.3 bits (72), Expect = 1.8
Identities = 45/178 (25%), Positives = 54/178 (30%), Gaps = 26/178 (14%)
Query: 96 NSPHSSGAMPGSSLGSPPT---------IPG--EAFPVSEHHQHSDLTAPPNSPTGHHP- 143
N P PG G PP PG + P ++ +PP P G P
Sbjct: 189 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQ 248
Query: 144 ---QPASLIPSHPSSFGSPPHPHLLPTTPAAPF-----PAQASECPVAAATAPHTP--GP 193
QP P G PP P P P P Q ++ + P P P
Sbjct: 249 GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPP 308
Query: 194 CQSSHLPSTSMPLLKMP--PPFSGCSHPCSGHCGGHCSGPLLPPPSSQPLPSTHRDPG 249
Q + P P P PP G + P G GP PP S PG
Sbjct: 309 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP--PPQGGSKSRSARSPPG 364
Score = 31.6 bits (70), Expect = 3.0
Identities = 45/177 (25%), Positives = 54/177 (30%), Gaps = 25/177 (14%)
Query: 96 NSPHSSGAMPGSSLGSPPT---------IPGEAF-PVSEHHQHSDLTAPPNSPTGHHP-- 143
N P PG G PP PG+ P + + +PP P G P
Sbjct: 66 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQG 125
Query: 144 --QPASLIPSHPSSFGSPPHPHLLPTTPAAPF-----PAQASECPVAAATAPHTP--GPC 194
QP P G PP P P P P Q ++ + P P P
Sbjct: 126 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPP 185
Query: 195 QSSHLPSTSMPLLKMP--PPFSGCSHPCSGHCGGHCSGPLLPPPSSQPLPSTHRDPG 249
Q + P P P PP G + P G GP PP S PG
Sbjct: 186 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP--PPQGDNKSQSARSPPG 240
Score = 31.2 bits (69), Expect = 3.9
Identities = 41/166 (24%), Positives = 53/166 (31%), Gaps = 18/166 (10%)
Query: 87 SAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTAPPNSPTGHHP--- 143
SA L+ + S + G+ G+PP ++ +PP P G P
Sbjct: 15 SAQNLNEDVSQEESPSLIAGNPQGAPP---------QGGNKPQGPPSPPGKPQGPPPQGG 65
Query: 144 -QPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHT-PGPCQSSHLPS 201
QP P G PP P P P Q + +P + PG Q
Sbjct: 66 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQG 125
Query: 202 TSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQPLPSTHRD 247
+ P PPP P G G GP PPP P D
Sbjct: 126 GNQPQGPPPPPGKPQGPPPQG--GNKPQGP--PPPGKPQGPPPQGD 167
Score = 30.4 bits (67), Expect = 6.7
Identities = 37/145 (25%), Positives = 46/145 (31%), Gaps = 42/145 (28%)
Query: 586 SCKQELPEPVSSGGKPQ--KGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGR 643
S Q L E VS P G QG+ + P PS G+ GP G
Sbjct: 14 SSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGP--------PSPPGKPQGPPPQG- 64
Query: 644 VLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPP 703
G +G P PG P P + +PQ PP
Sbjct: 65 -------------GNQPQGPPPPPGKPQGP-------------PPQGGNKPQG-----PP 93
Query: 704 GPARPQSLPQGKGRSRRSRNKQEKP 728
P +PQ P +SR R+ KP
Sbjct: 94 PPGKPQGPPPQGDKSRSPRSPPGKP 118
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 60.8 bits (146), Expect = 5e-09
Identities = 72/281 (25%), Positives = 102/281 (36%), Gaps = 57/281 (20%)
Query: 468 GFSKEGAAEPEPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQA---------PG 518
G S +G +P+ PP G Q N P G PQ Q PG
Sbjct: 38 GPSPQGGNKPQGPPPPPGKPQGPPPQGG--NKPQGPPPPGKPQGPPPQGDKSRSPRSPPG 95
Query: 519 EPAPP----WAEMRGPHPPWTEVRGPPP--GIVPENGLVRRLNTVPNLSRVIWVKTPKPG 572
+P P + +GP PP + +GPPP G P+ P PG
Sbjct: 96 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQG-------------------PPPPG 136
Query: 573 YPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAK 632
P P + S P S GKPQ QG ++ P PP + P +
Sbjct: 137 KPQGPPPQGDKSRS-------PRSPPGKPQGPPPQGG----NQPQGPPPPPGKPQGPPPQ 185
Query: 633 G--QVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEA 690
G + GP PG+ P G + + + G GP G + + PG+
Sbjct: 186 GGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPP-----PGKP 240
Query: 691 KARPQE--QESVQPPGPARPQSLP-QGKGRSRRSRNKQEKP 728
+ P + + PP P +PQ P QG +S+ +R+ KP
Sbjct: 241 QGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKP 281
Score = 60.5 bits (145), Expect = 6e-09
Identities = 70/264 (26%), Positives = 98/264 (37%), Gaps = 53/264 (20%)
Query: 478 EPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPA--PPWAEMRGPHPPWT 535
+PQ PP G+ Q P P G PQ Q P PP + +GP P
Sbjct: 96 KPQGPPPQG--GNQPQGP-------PPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGD 146
Query: 536 EVRGP--PPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPE 593
+ R P PPG + P P PG P P + P Q P
Sbjct: 147 KSRSPRSPPG--------KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKP---QGPPP 195
Query: 594 PVSSGGKPQKGKRQGSQAKKSEASPA----------------PRPPASLEVPSAKG--QV 635
P GKPQ QG +++ S++ P P PP + P +G +
Sbjct: 196 P----GKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 251
Query: 636 AGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQ 695
GP PG+ G A+ G S+ +R PG P +++G++ + P A PQ
Sbjct: 252 QGPPPPGK-----PQGPPAQGGSKSQSARSPPGKPQGPP--QQEGNNPQGPPPPAGGNPQ 304
Query: 696 EQESVQPPGPARPQSLPQGKGRSR 719
+ ++ P P PQG SR
Sbjct: 305 QPQAPPAGQPQGPPRPPQGGRPSR 328
Score = 60.1 bits (144), Expect = 8e-09
Identities = 72/259 (27%), Positives = 94/259 (36%), Gaps = 43/259 (16%)
Query: 468 GFSKEGAAEP-EPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQA---PGEPAPP 523
G +G P +PQ PP S + P G PQ Q P P PP
Sbjct: 65 GNKPQGPPPPGKPQGPPPQGDKSRSPRSPP----------GKPQGPPPQGGNQPQGPPPP 114
Query: 524 WAEMRGPHPPW-TEVRGPPP-----GIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSE 577
+ +GP P +GPPP G P+ R + P K P
Sbjct: 115 PGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPG-------KPQGPPPQGGN 167
Query: 578 EPSSKEVPSCKQELPEPVSSGGK-----PQKGKRQGSQAKKSEASPAPRPPASLEVPSAK 632
+P P K + P P GGK P GK QG + ++ + PP + P +
Sbjct: 168 QPQGPPPPPGKPQGPPP--QGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQ 225
Query: 633 G--QVAGPKQP-GRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGE 689
G Q GP P G+ P G G G GP G K++ S R+ PG+
Sbjct: 226 GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQ-----SARSPPGK 280
Query: 690 AKARPQEQESVQPPGPARP 708
+ PQ QE P GP P
Sbjct: 281 PQGPPQ-QEGNNPQGPPPP 298
Score = 36.2 bits (82), Expect = 0.12
Identities = 43/166 (25%), Positives = 51/166 (30%), Gaps = 27/166 (16%)
Query: 96 NSPHSSGAMPGSSLGSPPT---------IPGEAF-PVSEHHQHSDLTAPPNSPTGHHP-- 143
N P PG G PP PG+ P + + +PP P G P
Sbjct: 167 NQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQG 226
Query: 144 --QPASLIPSHPSSFGSPPHPHLLPTTPAAPF-----PAQASECPVAAATAPHTP--GPC 194
QP P G PP P P P PAQ +A + P P P
Sbjct: 227 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQ 286
Query: 195 QSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQP 240
Q + P PPP G G GP PP +P
Sbjct: 287 QEGNNPQGP------PPPAGGNPQQPQAPPAGQPQGPPRPPQGGRP 326
Score = 32.7 bits (73), Expect = 1.3
Identities = 43/167 (25%), Positives = 51/167 (30%), Gaps = 19/167 (11%)
Query: 96 NSPHSSGAMPGSSLGSPPT---------IPGEAF-PVSEHHQHSDLTAPPNSPTGHHP-- 143
N P PG G PP PG+ P + + +PP P G P
Sbjct: 45 NKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQG 104
Query: 144 --QPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHT-PGPCQSSHLP 200
QP P G PP P P P Q + +P + PG Q
Sbjct: 105 GNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQ 164
Query: 201 STSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQPLPSTHRD 247
+ P PPP P G G GP PPP P D
Sbjct: 165 GGNQPQGPPPPPGKPQGPPPQG--GKKPQGP--PPPGKPQGPPPQGD 207
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 59.3 bits (142), Expect = 1e-08
Identities = 66/239 (27%), Positives = 94/239 (39%), Gaps = 62/239 (25%)
Query: 487 LSGSSEQQPDINLDLSP-LTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPPP--G 543
LS + D++ + SP L G+PQ + Q +P +GP PP + +GPPP G
Sbjct: 13 LSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKP-------QGPPPPPGKPQGPPPQGG 65
Query: 544 IVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQK 603
P+ P PG P P + S + +P G PQ
Sbjct: 66 NKPQG-------------------PPPPGKPQGPPPQGDKSRSPRSPPGKP--QGPPPQG 104
Query: 604 GKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGS 663
GK QG PP P + GP PG+ G A+ G S+ +
Sbjct: 105 GKPQG-------------PP-----PQGGNKPQGPPPPGK-----PQGPPAQGGSKSQSA 141
Query: 664 RPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESV---QPPGPARPQSLPQGKGRSR 719
R PG P +++G++ + P A PQ+ ++ QP GP RP PQG SR
Sbjct: 142 RSPPGKPQGP--PQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRP---PQGGRPSR 195
Score = 36.2 bits (82), Expect = 0.12
Identities = 41/157 (26%), Positives = 50/157 (31%), Gaps = 20/157 (12%)
Query: 96 NSPHSSGAMPGSSLGSPPT---------IPGEAF-PVSEHHQHSDLTAPPNSPTGHHPQP 145
N P PG G PP PG+ P + + +PP P G PQ
Sbjct: 45 NKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQG 104
Query: 146 ASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPG--PCQSSHLPSTS 203
P G+ P P P P PAQ +A + P P P Q + P
Sbjct: 105 GKP-QGPPPQGGNKPQGPPPPGKPQGP-PAQGGSKSQSARSPPGKPQGPPQQEGNNPQGP 162
Query: 204 MPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQP 240
PPP G G GP PP +P
Sbjct: 163 ------PPPAGGNPQQPQAPPAGQPQGPPRPPQGGRP 193
Score = 30.8 bits (68), Expect = 5.1
Identities = 39/157 (24%), Positives = 52/157 (33%), Gaps = 34/157 (21%)
Query: 468 GFSKEGAAEP-EPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAE 526
G +G P +PQ PP S + P P G PQ Q +P
Sbjct: 65 GNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKP------ 118
Query: 527 MRGPHPPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPS 586
+GP PP G P G + G + P KP P +E ++ + P
Sbjct: 119 -QGPPPP-----GKPQGPPAQGGSKSQSARSP---------PGKPQGPPQQEGNNPQGP- 162
Query: 587 CKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPP 623
P +GG PQ Q + PRPP
Sbjct: 163 -------PPPAGGNPQ----QPQAPPAGQPQGPPRPP 188
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 57.8 bits (138), Expect = 4e-08
Identities = 67/233 (28%), Positives = 89/233 (38%), Gaps = 27/233 (11%)
Query: 484 PSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPPPG 543
P + GS QQ + + P+ H G P PP A RGP P E R PPG
Sbjct: 642 PPGVPGSVVQQEGLKGEQGA---PGPRGHQ----GAPGPPGA--RGPIGP--EGRDGPPG 690
Query: 544 IVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQK 603
+ G + P + ++ ++ P PG P P P LP + GKP
Sbjct: 691 LQGLRGKKGDMGP-PGIPGLLGLQGP-PGPPGVPGPPG---PGGSPGLPGEIGFPGKPGP 745
Query: 604 GKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGS 663
G K P P PP + P +G+ P +PG E+ + G GE
Sbjct: 746 PGPTGPPGKDGPNGP-PGPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAG 804
Query: 664 RPG----PGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPGPARPQSLP 712
PG PG G + EKG PG R ++ E+ GPA P LP
Sbjct: 805 LPGAPGFPGVRGEKGDQGEKGE--LGLPGLKGDRGEKGEA----GPAGPPGLP 851
Score = 43.1 bits (100), Expect = 0.001
Identities = 74/258 (28%), Positives = 90/258 (34%), Gaps = 32/258 (12%)
Query: 471 KEGAAEPEPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGP 530
KEG P PQ PS L G ++ D P G P PG P P A RGP
Sbjct: 1223 KEGP--PGPQG--PSGLPGIPGEEGKEGRDGKPGPPGEPGK--AGEPGLPGPEGA--RGP 1274
Query: 531 HPPWTEVRGPP--PGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCK 588
P + G PG E+G + +P + K G + P P K
Sbjct: 1275 -PGFKGHTGDSGAPGPRGESGAMG----LPGQEGLPG-KDGDTGPTGPQGPQGPRGPPGK 1328
Query: 589 QELP----EPVSSGGKPQKGKR--QGSQAKKSEASPA--PRPPASLEVPSAKGQVAGPKQ 640
P EP SG QKG + GS P P P VP +G P +
Sbjct: 1329 NGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGE 1388
Query: 641 PGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESV 700
PG E G +G +G G G G P KG + P + P E V
Sbjct: 1389 PGFKGERGDPGI-----KGDKGPPGGKGQPGDPGIPGHKGHTGLMGP---QGLPGENGPV 1440
Query: 701 QPPGPARPQSLPQGKGRS 718
PPGP P +G S
Sbjct: 1441 GPPGPPGQPGFPGLRGES 1458
Score = 40.4 bits (93), Expect = 0.006
Identities = 60/255 (23%), Positives = 86/255 (33%), Gaps = 42/255 (16%)
Query: 517 PGEPAPPWAEMRGPHPPWTEVRGP--PPGIVPENGLVRRLNTVPNLSRVIWVKTPKP--- 571
PG P P + R P +GP PPG + G N V P P
Sbjct: 876 PGLPGEPGLQGR---PGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGP 932
Query: 572 ----------GYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASP--- 618
G P + ++ + ++ P PV G P G K + P
Sbjct: 933 PGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLR 992
Query: 619 -APRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEK 677
+P P L +A G+V G + +CA G+ +G R PG GSP +
Sbjct: 993 GSPGLPGPLGTKAACGKVRGSE------------NCALGGQCVKGDRGAPGIPGSPGSRG 1040
Query: 678 EKGSSWRNWPGEA-----KARPQEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSL 732
+ G PG + K P + PGP P G + R KP L
Sbjct: 1041 DPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPG-NPGERGPPGKP--GL 1097
Query: 733 DDVFLPKDMDGVEMD 747
+ P D++ + D
Sbjct: 1098 SSLLSPGDINLLAKD 1112
Score = 40.4 bits (93), Expect = 0.006
Identities = 58/213 (27%), Positives = 77/213 (36%), Gaps = 43/213 (20%)
Query: 507 GSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPP--PGIVPENGLVRRLNTVPNLSRVI 564
GSP + L PG P P R P RGPP PG+ + + L++ +
Sbjct: 1060 GSPGSRGL--PGFPGPQGPAGRDGAPGNPGERGPPGKPGL----SSLLSPGDINLLAKDV 1113
Query: 565 WVKTPK--PGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASP--AP 620
P PG P LP G P K R+G++ KK EA P P
Sbjct: 1114 CNDCPPGPPGLPG---------------LPGFKGDKGVPGKPGREGTEGKKGEAGPPGLP 1158
Query: 621 RPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPG-PGWAGSPKTEKEK 679
PP +AGP+ G E G + G+ PG G G+P
Sbjct: 1159 GPPG----------IAGPQ--GSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGAD 1206
Query: 680 GSSWRNWPGEAKARPQEQESVQPPGPARPQSLP 712
G + P + P ++ PPGP P LP
Sbjct: 1207 GIAGAAGPPGIQGSPGKE---GPPGPQGPSGLP 1236
Score = 38.1 bits (87), Expect = 0.032
Identities = 35/145 (24%), Positives = 45/145 (31%), Gaps = 15/145 (10%)
Query: 572 GYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSA 631
G P E P + PS +P G+ K G K E P P + P
Sbjct: 1219 GSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPG-LPGPEGARGPPGF 1277
Query: 632 KGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAK 691
KG PG G G+ PG G P + + G + P +
Sbjct: 1278 KGHTGDSGAPGP--------------RGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPR 1323
Query: 692 ARPQEQESVQPPGPARPQSLPQGKG 716
P + S PG P P KG
Sbjct: 1324 GPPGKNGSPGSPGEPGPSGTPGQKG 1348
Score = 32.7 bits (73), Expect = 1.3
Identities = 39/150 (26%), Positives = 53/150 (35%), Gaps = 16/150 (10%)
Query: 571 PGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPS 630
PG P + SK + EL EP G P + +G Q P PP + P
Sbjct: 538 PGPPGRD--GSKGMRGEPGELGEP----GLPGEVGMRGPQGPPG----LPGPPGRVGAPG 587
Query: 631 AKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEA 690
+G+ G E G + G+ + RPGP P + EKG P
Sbjct: 588 LQGERGEKGTRGEKGERGLDGFPGKPGDTGQQGRPGPSGVAGP--QGEKGDVGPAGPPGV 645
Query: 691 KARPQEQESVQ----PPGPARPQSLPQGKG 716
+QE ++ PGP Q P G
Sbjct: 646 PGSVVQQEGLKGEQGAPGPRGHQGAPGPPG 675
Score = 32.0 bits (71), Expect = 2.3
Identities = 51/172 (29%), Positives = 65/172 (37%), Gaps = 46/172 (26%)
Query: 571 PGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGS-------QAKKSEASPAPRPP 623
PG EP + P LP P+ G K GK +GS Q K + AP P
Sbjct: 981 PGKGKDGEPGLRGSPG----LPGPL--GTKAACGKVRGSENCALGGQCVKGDRG-APGIP 1033
Query: 624 ASLEVPSAKGQ----VAGPKQPGRVLELPKVGSCAEAGEGSRGSR-----PGP----GWA 670
S P ++G VAGP P S +GS GSR PGP G
Sbjct: 1034 GS---PGSRGDPGIGVAGPPGP----------SGPPGDKGSPGSRGLPGFPGPQGPAGRD 1080
Query: 671 GSPKTEKEKGSSWRNW------PGEAKARPQEQESVQPPGPARPQSLPQGKG 716
G+P E+G + PG+ ++ + PPGP LP KG
Sbjct: 1081 GAPGNPGERGPPGKPGLSSLLSPGDINLLAKDVCNDCPPGPPGLPGLPGFKG 1132
Score = 31.6 bits (70), Expect = 3.0
Identities = 31/93 (33%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 628 VPSAKGQVA--GPK-QPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWR 684
+P KG + GP PG E VG G+G +G + G G P + KG R
Sbjct: 494 LPGPKGDIGAIGPVGAPGPKGEKGDVG-IGPFGQGEKGEKGSLGLPGPPGRDGSKG--MR 550
Query: 685 NWPGEAKARPQEQESVQPPGPARPQSLPQGKGR 717
PGE P V GP P LP GR
Sbjct: 551 GEPGEL-GEPGLPGEVGMRGPQGPPGLPGPPGR 582
Score = 30.8 bits (68), Expect = 5.1
Identities = 39/148 (26%), Positives = 49/148 (33%), Gaps = 18/148 (12%)
Query: 571 PGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPR--PPASLEV 628
PG P S +E +Q P P G P G + P R PP +
Sbjct: 643 PGVPGSVV--QQEGLKGEQGAPGPRGHQGAP------GPPGARGPIGPEGRDGPPGLQGL 694
Query: 629 PSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPG 688
KG + P PG + G G PGPG GSP E G + P
Sbjct: 695 RGKKGDMGPPGIPGLL------GLQGPPGPPGVPGPPGPG--GSPGLPGEIGFPGKPGPP 746
Query: 689 EAKARPQEQESVQPPGPARPQSLPQGKG 716
P + PPGP + P +G
Sbjct: 747 GPTGPPGKDGPNGPPGPPGTKGEPGERG 774
Score = 30.4 bits (67), Expect = 6.7
Identities = 53/209 (25%), Positives = 71/209 (33%), Gaps = 47/209 (22%)
Query: 517 PGEPAPPWAE----MRGPHPPWTEVRGPP-----PGIVPENGLVRRLNTVPNLSRVIWVK 567
PG+P PP GP+ P GPP PG E+GL + P L I +
Sbjct: 740 PGKPGPPGPTGPPGKDGPNGP----PGPPGTKGEPGERGEDGLPGK----PGLRGEIGEQ 791
Query: 568 --TPKPGYPSSEE-PSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRP-- 622
+PG P + P + E + G G + G + +K EA PA P
Sbjct: 792 GLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLK-GDRGEKGEAGPAGPPGL 850
Query: 623 --PASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKG 680
SL P P+ PG +G +G + PG G P + G
Sbjct: 851 PGTTSLFTPH-------PRMPGE--------------QGPKGEKGDPGLPGEPGLQGRPG 889
Query: 681 SSWRNWP-GEAKARPQEQESVQPPGPARP 708
P G A+ QE P P
Sbjct: 890 ELGPQGPTGPPGAKGQEGAHGAPGAAGNP 918
Score = 30.4 bits (67), Expect = 6.7
Identities = 52/221 (23%), Positives = 78/221 (35%), Gaps = 35/221 (15%)
Query: 476 EPEPQSLPPSNLSGSSEQQPDINLDLSPL-TLGSPQNHTLQA----PGEPAPPWAEMRGP 530
EP P P S P + L P G P + PG+P P +
Sbjct: 1337 EPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERG 1396
Query: 531 HPPWTEVRGPP--------PGIVPENGLVRRLNT--VPNLSRVIWVKTP--KPGYPS--S 576
P +GPP PGI G + +P + + P +PG+P
Sbjct: 1397 DPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRG 1456
Query: 577 EEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVA 636
E PS + + QE + GK+ ++ A PPA ++ S++G+
Sbjct: 1457 ESPSMETLRRLIQE-----------ELGKQLETRLAYLLAQ---MPPAYMK--SSQGRPG 1500
Query: 637 GPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEK 677
P PG+ + G E G +G GP PK E+
Sbjct: 1501 PPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGER 1541
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 57.4 bits (137), Expect = 5e-08
Identities = 66/233 (28%), Positives = 88/233 (37%), Gaps = 45/233 (19%)
Query: 487 LSGSSEQQPDINLDLSPLTL-GSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPPPGIV 545
LS + D++ + S + G P+ Q +P P P PP G P G
Sbjct: 13 LSSAESSSEDVSQEESLFLISGKPEGRRPQGGNQPQRP------PPPP-----GKPQGPP 61
Query: 546 PENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGK 605
P+ G N S+ P PG P P + P GKP++
Sbjct: 62 PQGG---------NQSQG---PPPPPGKPEGRPPQGGN------QSQGPPPHPGKPERPP 103
Query: 606 RQGSQAKKSEASPAPRPPASLEVPSAKGQVAG---PKQPGRVLELPKVGSCAEAGEGSRG 662
QG +++ P PP E P +G P PG+ P G G S+G
Sbjct: 104 PQGG----NQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQG-----GNQSQG 154
Query: 663 SRPGPGWA-GSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPGPARPQSLPQG 714
P PG G P E K S R+ PG+ + PQ QE +P GP P PQG
Sbjct: 155 PPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQ-QEGNKPQGPP-PPGKPQG 205
Score = 46.6 bits (109), Expect = 9e-05
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 575 SSEEPSSKE---VPSCKQELPEPVSSGGKPQK-----GKRQGSQAKKSEASPAPRPPASL 626
SSE+ S +E + S K E P G +PQ+ GK QG + S P PP
Sbjct: 19 SSEDVSQEESLFLISGKPEGRRP-QGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGK 77
Query: 627 ---EVPSAKGQVAGPK-QPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSS 682
P Q GP PG+ P G G S+G+ P PG P+ +G +
Sbjct: 78 PEGRPPQGGNQSQGPPPHPGKPERPPPQG-----GNQSQGTPPPPG---KPERPPPQGGN 129
Query: 683 WRNWPGEAKARPQE-------QESVQPPGPARPQSLPQGKG-RSRRSRNKQEKP 728
+ P +P+ Q PP P +P+ P +G +SR +R+ KP
Sbjct: 130 QSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKP 183
Score = 38.9 bits (89), Expect = 0.019
Identities = 43/163 (26%), Positives = 51/163 (31%), Gaps = 24/163 (14%)
Query: 98 PHSSGAMPGSSLGSPPTIPG--EAFPVSEHHQHSDLTAPPNSPT---------GHHPQPA 146
P G+ PP PG E P +Q PP P H P P
Sbjct: 78 PEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPP 137
Query: 147 SLIPSHP------SSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSS-HL 199
P P S G PPHP P P P + ++ A + GP Q +
Sbjct: 138 PGKPERPPPQGGNQSQGPPPHPG----KPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNK 193
Query: 200 PSTSMPLLKM--PPPFSGCSHPCSGHCGGHCSGPLLPPPSSQP 240
P P K PPP G G GP PP +P
Sbjct: 194 PQGPPPPGKPQGPPPAGGNPQQPQAPPAGKPQGPPPPPQGGRP 236
Score = 37.0 bits (84), Expect = 0.071
Identities = 54/198 (27%), Positives = 62/198 (31%), Gaps = 39/198 (19%)
Query: 61 SSSSSSSSSSSSCPGNSGDWDPSSFLSAHKLSGL----WNSPHSSGAMPGSSLGSPPTIP 116
SS+ SSS S + S FL + K G N P PG G PP
Sbjct: 14 SSAESSSEDVSQ--------EESLFLISGKPEGRRPQGGNQPQRPPPPPGKPQGPPP--- 62
Query: 117 GEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFP-- 174
+Q PP P G PQ + S G PPH P P P P
Sbjct: 63 ------QGGNQSQGPPPPPGKPEGRPPQGGN------QSQGPPPH----PGKPERPPPQG 106
Query: 175 ---AQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGP 231
+Q + P P G Q SH P + PPP G G GP
Sbjct: 107 GNQSQGTPPPPGKPERPPPQGGNQ-SHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGP 165
Query: 232 LLPPPSSQPLPSTHRDPG 249
PP S PG
Sbjct: 166 --PPQEGNKSRSARSPPG 181
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 56.2 bits (134), Expect = 1e-07
Identities = 59/178 (33%), Positives = 70/178 (39%), Gaps = 20/178 (11%)
Query: 31 TGREHAVAISLSHTSCKSQSCGDDSHSSSSSSSSSSSSSSSSCPGNSGDWDPSSFLSAHK 90
TG + A S S S S S SSSSSSSSSSSSSSSS +S SS S+
Sbjct: 2597 TGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2656
Query: 91 LSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTAPPNS----PTGHHPQPA 146
S +S SS + + S + EA P TA P++ PT Q
Sbjct: 2657 SSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAP--------TAGPSAQAALPTKATKQAG 2708
Query: 147 SLIPS--HPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPST 202
PS P P P P P P P A A A P + HLP+T
Sbjct: 2709 KARPSAHSPGKKTPAPQPQAPPPQPTQPLQ------PKAQAGAKSRPKKREGVHLPTT 2760
Score = 44.7 bits (104), Expect = 3e-04
Identities = 41/128 (32%), Positives = 52/128 (40%), Gaps = 6/128 (4%)
Query: 19 SCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGDDSHSSSSSSSSSSSSSSSSCPGNSG 78
S S + + + S S +S S S S SSSSSSSSSSSSSSSS ++
Sbjct: 2614 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTT 2673
Query: 79 DWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTAP-PNS 137
D D S P + A+P + G+A P S H AP P +
Sbjct: 2674 DEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQ----AGKARP-SAHSPGKKTPAPQPQA 2728
Query: 138 PTGHHPQP 145
P QP
Sbjct: 2729 PPPQPTQP 2736
Score = 40.4 bits (93), Expect = 0.006
Identities = 52/189 (27%), Positives = 73/189 (38%), Gaps = 33/189 (17%)
Query: 49 QSCGDDSHSSSSSSSSSSSSSSSSCPGNS-------GDWD--------------PSSFLS 87
Q ++S SSSSSSS SSSSSSSS S GD + SS +
Sbjct: 2551 QDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAA 2610
Query: 88 AHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPAS 147
+ S +S SS + SS S + + S S ++ +S + +S
Sbjct: 2611 SPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2670
Query: 148 LIPSHPSSFGS----PPHPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTS 203
SS S P P P+ AA P +A++ A + H+PG T
Sbjct: 2671 STTDEDSSCSSDDEAAPAPTAGPSAQAA-LPTKATKQAGKARPSAHSPG-------KKTP 2722
Query: 204 MPLLKMPPP 212
P + PPP
Sbjct: 2723 APQPQAPPP 2731
Score = 35.8 bits (81), Expect = 0.16
Identities = 57/209 (27%), Positives = 79/209 (37%), Gaps = 28/209 (13%)
Query: 105 PGSSLGSPPTIPGEA-FPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPH 163
PGS P + A P + APP + P+P + +P+ +S P
Sbjct: 2370 PGSKKSPPEPVDKRAKAPKARPAPPQPSPAPPAFTSCPAPEPFAELPAPATSLAPAP--- 2426
Query: 164 LLPTTPAA-PFPAQASECPVAAATAPHTPGP-----CQSSHLPSTSMP--------LLKM 209
L T PA P P +A + A P PG + H TS LL+
Sbjct: 2427 -LITMPATRPKPKKARAAEESGAKGPRRPGEEAELLVKLDHEGVTSPKSKKAKEALLLRE 2485
Query: 210 PPPFSGCSHPCSGHCGGH------CSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQ 263
P G P S G S P P P + ++PG G F SG +
Sbjct: 2486 DPGAGGWQEPKSLLSLGSYPPAAGSSEPKAPWPKATD-GDLAQEPG-PGLTFEDSGNP-K 2542
Query: 264 LPQPCEADEGLGEEEDSSSERSSCTSSST 292
P +A++ EE +SSS SS +SSS+
Sbjct: 2543 SPDKAQAEQDGAEESESSSSSSSGSSSSS 2571
Score = 32.3 bits (72), Expect = 1.8
Identities = 72/308 (23%), Positives = 100/308 (32%), Gaps = 71/308 (23%)
Query: 475 AEPEPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPW 534
AEP P L PS S + D T GS + +A G P A+ +G
Sbjct: 2289 AEPSPALLVPSAKRRSRKTSKDTGEGKDGGTAGSEEPGA-KARGRGRKPSAKAKGDRAAT 2347
Query: 535 TEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEP 594
E P + P P + EPSS P K+ PEP
Sbjct: 2348 LEEGNPTDEV--------------------------PSTPLALEPSS--TPGSKKSPPEP 2379
Query: 595 VSSGGKPQKGKRQGSQAKKSEASPA-----PRPPA--SLEVPSAKGQVAGPK---QPGRV 644
V +AK +A PA P PPA S P ++ P P +
Sbjct: 2380 VDK------------RAKAPKARPAPPQPSPAPPAFTSCPAPEPFAELPAPATSLAPAPL 2427
Query: 645 LEL------PKVGSCAEAGEGSRGSRPGP----------GWAGSPKTEKEKGS-SWRNWP 687
+ + PK AE RPG SPK++K K + R P
Sbjct: 2428 ITMPATRPKPKKARAAEESGAKGPRRPGEEAELLVKLDHEGVTSPKSKKAKEALLLREDP 2487
Query: 688 GEAK-ARPQEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSL--DDVFLPKDMDGV 744
G P+ S+ PA S P+ + ++P L +D PK D
Sbjct: 2488 GAGGWQEPKSLLSLGSYPPAAGSSEPKAPWPKATDGDLAQEPGPGLTFEDSGNPKSPDKA 2547
Query: 745 EMDETDRE 752
+ ++ E
Sbjct: 2548 QAEQDGAE 2555
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 56.2 bits (134), Expect = 1e-07
Identities = 41/124 (33%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 133 APPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPG 192
APP +P G PA+ + P +PP P P AA PA+A AAATAP +PG
Sbjct: 110 APPRAPRG---APAAAAAAAPPPTPAPPPP---PAPVAAAAPARAPRAAAAAATAPPSPG 163
Query: 193 PCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGH--------CSGPLLPPPSSQPLPST 244
P Q + P L PPP + G P LPPP P P
Sbjct: 164 PAQPGPRAQRAAP-LAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQ 222
Query: 245 HRDP 248
+ P
Sbjct: 223 QQQP 226
Score = 38.9 bits (89), Expect = 0.019
Identities = 63/261 (24%), Positives = 88/261 (33%), Gaps = 43/261 (16%)
Query: 520 PAPPWAEMRGPH------PPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGY 573
PAPP A P PP T PPP V R P + P PG
Sbjct: 109 PAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPAR----APRAAAAAATAPPSPGP 164
Query: 574 ----PSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVP 629
P ++ + P P V+ P++ A++ P P+PPA
Sbjct: 165 AQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPA----- 219
Query: 630 SAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSR--------PGPGWAGSPKT------ 675
+ Q P QP + P G AG +R G G AG T
Sbjct: 220 PPQQQQPPPPQP----QPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQG 275
Query: 676 --EKE---KGSSWRNWPGEAKARPQEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPAS 730
E+E +G R G A A P+ + P A + +G R K+E+
Sbjct: 276 LLEEEAAARGRLERTRLG-ALALPRGDRPGRAPPAASARPSRSKRGGEERVLEKEEEEDD 334
Query: 731 SLDDVFLPKDMDGVEMDETDR 751
D+ +G E+ E+DR
Sbjct: 335 DEDEDEEDDVSEGSEVPESDR 355
Score = 33.9 bits (76), Expect = 0.60
Identities = 74/333 (22%), Positives = 105/333 (31%), Gaps = 81/333 (24%)
Query: 100 SSGAMPGSSLGSPPTIP-GEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGS 158
++ A P + PP P A P + P SP P P + + +
Sbjct: 123 AAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRA---QRAAPLAA 179
Query: 159 PPHPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSH 218
PP P A P + + P AA P P P Q P P P P
Sbjct: 180 PPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQP------ 233
Query: 219 PCSGHCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEE 278
P G G +G P S + + G G + + +GL EEE
Sbjct: 234 PPEG--GAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRV-----------QGLLEEE 280
Query: 279 DSSSERSSCT-----SSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREKLRSRL 333
++ R T + R G+ APPAA S + + R+
Sbjct: 281 AAARGRLERTRLGALALPRGDRPGR-------------APPAA--SARPSRSKRGGEERV 325
Query: 334 TRRKEELPMKGGTLGGIPGEPAVDHRDVDELLEFINSTEPKVPNSARAAKRARHKLKKKE 393
++EE + D DE E S +VP S R A H+L
Sbjct: 326 LEKEEE-----------------EDDDEDEDEEDDVSEGSEVPESDRPAGAQHHQL---- 364
Query: 394 KEKAQLAAEALKQANRVSGSREPRPARERLLEW 426
+G R P+ A+ER+ EW
Sbjct: 365 -----------------NGERGPQSAKERVKEW 380
Score = 32.0 bits (71), Expect = 2.3
Identities = 33/128 (25%), Positives = 39/128 (30%), Gaps = 8/128 (6%)
Query: 593 EPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVG- 651
+P G P R A + A+ AP P + P A A P + R
Sbjct: 100 QPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAP 159
Query: 652 -SCAEAGEGSRGSR------PGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPG 704
S A G R R P P A P G P A P QPP
Sbjct: 160 PSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPA 219
Query: 705 PARPQSLP 712
P + Q P
Sbjct: 220 PPQQQQPP 227
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 55.8 bits (133), Expect = 1e-07
Identities = 61/244 (25%), Positives = 82/244 (33%), Gaps = 39/244 (15%)
Query: 483 PPSNLSGSSEQQPDINLDLSPLTLGSPQNHTL-QAPGEPAPPWAEMRGPHPPWTEVRGPP 541
P G+ E P L+ L P+ +L PGE A +RGP P P
Sbjct: 25 PRKPCRGTQEFSPLCLRALAFCALAKPRASSLGPGPGELAARSPVLRGPQAPLRPGGWAP 84
Query: 542 PGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKP 601
G+ + +W T +PG P++ +V +C + E GG P
Sbjct: 85 DGL-----------------KHLWAPTGRPGVPNTAAGEDADVAACPRRGEEEEGGGGFP 127
Query: 602 QKGKRQGS------------QAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPK 649
G R + ++ S AS PRP LE P + P++P P
Sbjct: 128 HFGVRSCAPPGRCPAPPHPRESTTSFASAPPRPAPGLE-PQRGPAASPPQEPSSRPPSPP 186
Query: 650 VGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPGPARPQ 709
G E GPG A P + N P A P S P PA P
Sbjct: 187 AGLSTEPA--------GPGTAPRPFLPGQPAEVDGNPPPAAPEAPAASPSTASPAPAAPG 238
Query: 710 SLPQ 713
L Q
Sbjct: 239 DLRQ 242
Score = 39.3 bits (90), Expect = 0.014
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 127 QHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAA----PFPAQASECPV 182
Q +PP P+ P P + + + P+ G+ P P LP PA P PA A E P
Sbjct: 167 QRGPAASPPQEPSSRPPSPPAGLSTEPAGPGTAPRP-FLPGQPAEVDGNPPPA-APEAPA 224
Query: 183 A----AATAPHTPGPCQSSH 198
A A+ AP PG + H
Sbjct: 225 ASPSTASPAPAAPGDLRQEH 244
Score = 31.2 bits (69), Expect = 3.9
Identities = 35/137 (25%), Positives = 44/137 (32%), Gaps = 39/137 (28%)
Query: 116 PGEAFPVSEHHQHSDLT---APPNSPTGHHPQ--PASLIPSHPSSFGSPPHPHLLPTTPA 170
PG P H + S + APP G PQ PA+ P PSS PP P
Sbjct: 137 PGRC-PAPPHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSS--RPPSP-------- 185
Query: 171 APFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSG 230
P +T P PG LP + PPP +
Sbjct: 186 ----------PAGLSTEPAGPGTAPRPFLPGQPAEVDGNPPPAAP-------------EA 222
Query: 231 PLLPPPSSQPLPSTHRD 247
P P ++ P P+ D
Sbjct: 223 PAASPSTASPAPAAPGD 239
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 54.7 bits (130), Expect = 3e-07
Identities = 70/272 (25%), Positives = 112/272 (41%), Gaps = 42/272 (15%)
Query: 50 SCGDDSHSSSSSSSSSSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSL 109
S G SH S SSSSSSS+S+S + + SS LS S +++S SSG+ +
Sbjct: 1091 SSGSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSSKLS----SSMYSSQGSSGSSQSKNS 1146
Query: 110 GSPPTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLI----------PSH------P 153
PG + P+++H S ++ P G +P+SL+ PSH
Sbjct: 1147 SQSGGKPGSS-PITKHGLSSGSSSTKMKPQG---KPSSLMNPSLSKPNISPSHSRPPGGS 1202
Query: 154 SSFGSPPHPHLLPTTPAAPFPAQASECPVAAAT-APHTPGPCQSSHLPSTS------MPL 206
SP P +P TP P+ ++ P+++ + H G SS + S+S
Sbjct: 1203 DKLASPMKP--VPGTP----PSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGLGSSGSLS 1256
Query: 207 LKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQ 266
K PP + C+ S SG + +Q S + P + K + + + +L
Sbjct: 1257 QKTPPSSNSCTASSSSFSS---SGSSMSSSQNQHGSSKGKSPS-RNKKPSLTAVIDKLKH 1312
Query: 267 PCEADEGLGEEEDSSSERSSCTSSSTHQRDGK 298
G G E+ + T+SS+H K
Sbjct: 1313 GV-VTSGPGGEDPLDGQMGVSTNSSSHPMSSK 1343
Score = 37.0 bits (84), Expect = 0.071
Identities = 45/180 (25%), Positives = 63/180 (35%), Gaps = 17/180 (9%)
Query: 567 KTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASL 626
K PK +E S S + P P S+GG G SQ A+P P P ++
Sbjct: 1008 KPPKRKKADTEGKSPSHSSSNRPFTP-PTSTGGSKSPGSAGRSQTPPGVATP-PIPKITI 1065
Query: 627 EVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSR--GSRPGPGWAGSPKTEKEKGSSWR 684
++P V P + V S S S +G K+ K +GSS
Sbjct: 1066 QIPKGTVMVGKPSSHSQYTSSGSVSSSGSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSS 1125
Query: 685 NWPGE------AKARPQEQESVQPPGPARPQSLPQGK-----GRSRRSRNKQEKPASSLD 733
+ Q + S Q G +P S P K G S Q KP+S ++
Sbjct: 1126 KLSSSMYSSQGSSGSSQSKNSSQSGG--KPGSSPITKHGLSSGSSSTKMKPQGKPSSLMN 1183
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 54.7 bits (130), Expect = 3e-07
Identities = 72/275 (26%), Positives = 102/275 (37%), Gaps = 53/275 (19%)
Query: 470 SKEGAAEPEPQSLPPSNLSGSSEQQPD-INLDLSPLTLGSPQNHTLQAPGEPAPPWAEMR 528
S+ G A+P Q PS L+ QQP + + P P L PA P A+
Sbjct: 324 SQPGPAKPPAQ---PSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLG----PAKPPAQQT 376
Query: 529 GPHPPWTEVRGP-----PPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKE 583
G P +E GP PPG+ G P V TPKP +++P +
Sbjct: 377 GSEKPSSEQPGPKALAQPPGV----GKTPAQQPGPAKPPTQQVGTPKP---LAQQPGLQS 429
Query: 584 VPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAP-RPPASLEVPSAKGQVAGPKQPG 642
PV G + +Q K S P +PP+ L P+ P+QPG
Sbjct: 430 PAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPP----PQQPG 485
Query: 643 RVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWR---NWPGEAKARPQEQES 699
++P P GS K ++ S + PG AK PQ+ S
Sbjct: 486 P-------------------AKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGS 526
Query: 700 VQP----PGPARPQSLPQGKGRSRRSRNKQEKPAS 730
+P PG A+P + Q ++ S + KP S
Sbjct: 527 TKPPSQQPGSAKPSA--QQPSPAKPSAQQSTKPVS 559
Score = 47.0 bits (110), Expect = 7e-05
Identities = 133/601 (22%), Positives = 196/601 (32%), Gaps = 111/601 (18%)
Query: 112 PPTIPGE-AFPVSEHHQHSDLTAPPNS------PTGHHPQPASLIPSHPSSFGSPPH-PH 163
P IP + A P Q + T PP+ P P PA P P S P P
Sbjct: 446 PGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPG 505
Query: 164 LLPTTPAAPFPAQASECPVAAATAPHTPGPCQS-SHLPSTSMPLLKMPPPFSGCSHPCSG 222
P P PA+ S P PG + S P ++ P + P P + +
Sbjct: 506 STKPPPQQPGPAKPS---------PQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTK 556
Query: 223 HCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSS 282
SG L PP+ P S + P GL + C E L + ++
Sbjct: 557 PVSQTGSGKPLQPPTVSP--SAKQPPS--------QGLPKTICPLCNTTELLLHVPEKAN 606
Query: 283 ERSSCTSSST------------HQRDGKFCDCCYCEFF----GHNAP-PAAP-------- 317
++CT T H + K C C+ G AP P++P
Sbjct: 607 F-NTCTECQTTVCSLCGFNPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKLKTAP 665
Query: 318 ----------------TSRNYTEIREKLRSRLTRRKEELPM-KGGTLGGIPGEPAVDHRD 360
TS ++ S+ K+ P+ K TL G P A +
Sbjct: 666 VTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPE 725
Query: 361 VDELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLAAEALKQANRVSGSREPRPAR 420
D L + EP VP+ E++KA +A + KQ V + + +
Sbjct: 726 ADSLSKPAPPKEPSVPS---------------EQDKAPVADDKPKQPKMVKPTTDLVSSS 770
Query: 421 ERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQ 480
+ PD +V S + T DS + S S + F + P
Sbjct: 771 SATTK-PDIPSSKVQSQAEEKTTPPLKT--DSAKPSQSFPPTGEKVSPFDSKAIPRPASD 827
Query: 481 SLPPSNLSGSSEQQPDINLD--------LSPLTLGSPQNHTLQAP-GEPAPPWAEMRGPH 531
S S+ SSE + +D T SP+ P G P PP GP
Sbjct: 828 SKIISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPP-----GPR 882
Query: 532 PPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEV---PSCK 588
P + P RR + NL + +P P E + K S
Sbjct: 883 PTAGQTVPTPQQSPKPQEQSRRFSL--NLGSITDAPKSQPTTPQ-ETVTGKLFGFGASIF 939
Query: 589 QELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELP 648
+ +S+ G+P + G A +A +PP S P + GQ P P + + +
Sbjct: 940 SQASNLISTAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQ--APPAPAKSIPVK 997
Query: 649 K 649
K
Sbjct: 998 K 998
Score = 46.2 bits (108), Expect = 1e-04
Identities = 89/426 (20%), Positives = 147/426 (34%), Gaps = 64/426 (15%)
Query: 336 RKEEL----PMKGGTLGGIPGEPAVDHRDVDELLEFINSTEPKVPN---SARAAKRARHK 388
RK+EL P K PG PA + S E K+P S + K ++ +
Sbjct: 83 RKQELDSSHPPKQSGRPPDPGRPAQPGLSKSRTTDTFRS-EQKLPGRSPSTISLKESKSR 141
Query: 389 LKKKEKEKAQLAAEALKQANRVSGSREPRPARERLLEWPDRELDRVNSF---LSSRLQEI 445
KE+ K+ + L + N +S +++ N F S +
Sbjct: 142 TDLKEEHKSSMMPGFLSEVNALSAVSSV--------------VNKFNPFDLISDSEASQE 187
Query: 446 KNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQSLPPSNLSGSSEQQPD-INLDLSPL 504
+ T K + + EG +P Q PP + D + D +P
Sbjct: 188 ETTKKQKV----------VQKEQGKPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPK 237
Query: 505 TLGSPQNHTL--QAPGEPAPPWAEMRGPHPPWTEVRGPPPGIVPEN---GLVRRLNTVPN 559
++ S Q + Q PG P + P ++ P+ +VR + P+
Sbjct: 238 SISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPS 297
Query: 560 LSRVIW--VKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEAS 617
L ++ P PG P +++P ++ P P +P G + +
Sbjct: 298 LPSPSKPPIQQPTPGKPPAQQPGHEK------SQPGPAKPPAQPS-GLTKPLAQQPGTVK 350
Query: 618 PAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPG--------PGW 669
P +PP + + P+ Q GP +P + S + G + PG PG
Sbjct: 351 PPVQPPGTTKPPA---QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGP 407
Query: 670 AGSPKTEKEKGSSWRNWPG---EAKARPQEQESVQPPGPARPQSLPQGKGRSRRSRNKQE 726
A P + PG AKA + VQ PGP + + G G++ +
Sbjct: 408 AKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPT 467
Query: 727 KPASSL 732
KP S L
Sbjct: 468 KPPSQL 473
Score = 43.5 bits (101), Expect = 8e-04
Identities = 142/687 (20%), Positives = 219/687 (31%), Gaps = 121/687 (17%)
Query: 97 SPHSSGAMPG-SSLGSPPTI-------PGEAFPVSEH-------HQHSDLTAPPNSPTG- 140
S S PG +L PP + PG A P ++ Q L +P +P
Sbjct: 378 SEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPT 437
Query: 141 ----HHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQS 196
P P IP+ + G PT P + P A P A P S
Sbjct: 438 KTPVQQPGPGK-IPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGS 496
Query: 197 SHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQP---LPSTHRDPGCKGH 253
+ PS K PP G + P S G P P S++P PS + +
Sbjct: 497 AKPPSQQPGSTKPPPQQPGPAKP-SPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQST 555
Query: 254 KFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQ------RDGKF-----CDC 302
K + + QP + ++ C +T + F C
Sbjct: 556 KPVSQTGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQT 615
Query: 303 CYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGGTLGGIPGEPAVDHRDVD 362
C G N P + TE++E L ++ GG L +P P
Sbjct: 616 TVCSLCGFNPNP------HLTEVKEWLCLNCQMKR----ALGGDLAPVPSSP-------- 657
Query: 363 ELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLAAEALKQANRVSGSREPRPARER 422
+PK+ + A K + ++ + A KQ S+ P P +
Sbjct: 658 ---------QPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQ----DLSKAPEPKKPP 704
Query: 423 LLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQSL 482
L VK + S A P+ S+
Sbjct: 705 PL------------------------VKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSV 740
Query: 483 PPSN----LSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVR 538
P ++ +QP + + L S P AE + P T+
Sbjct: 741 PSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPLKTDSA 800
Query: 539 GPPPGIVPENGLVRRLNT--VP---NLSRVIWVKTPKPGYPSSEEPSSKEV-PSCKQELP 592
P P V ++ +P + S++I PG PSSE K+V P K+E P
Sbjct: 801 KPSQSFPPTGEKVSPFDSKAIPRPASDSKII----SHPG-PSSESKGQKQVDPVQKKEEP 855
Query: 593 EPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGS 652
+ + P+ + K S P PRP A VP+ + Q P++ R L +GS
Sbjct: 856 KKAQTKMSPKPDAK--PMPKGSPTPPGPRPTAGQTVPTPQ-QSPKPQEQSRRFSL-NLGS 911
Query: 653 CAEAGEGSRGSRPGP-------GWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPGP 705
+A + S+ + P G+ S ++ S PG Q P P
Sbjct: 912 ITDAPK-SQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAPAP 970
Query: 706 ARPQSLPQGKGRSRRSRNKQEKPASSL 732
++P P +G + + PA S+
Sbjct: 971 SQP---PTSQGPPKSTGQAPPAPAKSI 994
Score = 32.0 bits (71), Expect = 2.3
Identities = 53/193 (27%), Positives = 67/193 (34%), Gaps = 30/193 (15%)
Query: 79 DWDPSSFLSAHKLSGLWNSPHSSGAM-----PGSSL--GSPPTIPGEAFPVSEHHQHS-D 130
D PSS ++ L + +SG P S L GSP A P S D
Sbjct: 2341 DHPPSSVIALPMKEQLSTTYFTSGETFGQEKPASQLPSGSPSVSSLPAKPRPFFRSSSLD 2400
Query: 131 LTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVA------- 183
++A P P P P P PP P L P T P + VA
Sbjct: 2401 ISAQPPPPPPPPPPPPPPPPP-------PPPPPLPPPTSPKPTILPKKKLTVASPVTTAT 2453
Query: 184 ----AATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQ 239
A T T +S+ LP T + PP S SG H P PP + +
Sbjct: 2454 PLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPK 2513
Query: 240 P----LPSTHRDP 248
P LP+T + P
Sbjct: 2514 PVIPQLPTTTQKP 2526
Score = 30.4 bits (67), Expect = 6.7
Identities = 35/130 (26%), Positives = 43/130 (33%), Gaps = 11/130 (8%)
Query: 112 PPTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPH-PHLLPTTPA 170
P IP + P + Q P S + P+ I S P G P P P T
Sbjct: 216 PKPIPKQQGPGRDPLQQD---GTPKSISSQQPEK---IKSQPPGTGKPIQGPTQTPQTDH 269
Query: 171 APFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSG 230
A P Q A G LPS S P ++ P P P + G S
Sbjct: 270 AKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTP----GKPPAQQPGHEKSQ 325
Query: 231 PLLPPPSSQP 240
P P +QP
Sbjct: 326 PGPAKPPAQP 335
Score = 30.0 bits (66), Expect = 8.7
Identities = 55/248 (22%), Positives = 75/248 (30%), Gaps = 34/248 (13%)
Query: 9 LGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGDDSHSSSSSSSSSSSS 68
L E+ W+C +C+ +R G + A S K+ S S SS +S
Sbjct: 629 LTEVKEWLCLNCQM-----KRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTS 683
Query: 69 SSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPVSEHHQH 128
D P LS +P P L PT+ G ++
Sbjct: 684 PKK-------DAAPKQDLS--------KAPEPKKPPP---LVKQPTLHGSPSAKAKQPPE 725
Query: 129 SDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAP 188
+D + P P PS PS P P P P +A T P
Sbjct: 726 ADSLSKPAPPKE---------PSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKP 776
Query: 189 HTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQPLPSTHRDP 248
P S + P LK S P +G +P P+S +H P
Sbjct: 777 DIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGP 836
Query: 249 G--CKGHK 254
KG K
Sbjct: 837 SSESKGQK 844
Score = 30.0 bits (66), Expect = 8.7
Identities = 38/167 (22%), Positives = 59/167 (35%), Gaps = 25/167 (14%)
Query: 577 EEPSSKEVPSCKQEL-PEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQV 635
E K+ S QE P P P++ K + + K P P +P AK
Sbjct: 1197 ESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTPEDKKLLPEAK--T 1254
Query: 636 AGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQ 695
+ P++ L +V E EG +PKT +E G PQ
Sbjct: 1255 SAPEEQKHDLLKSQVQIAEEKLEGRV----------APKTVQEGKQPQTKMEGLPSGTPQ 1304
Query: 696 E------------QESVQPPGPARPQSLPQGKGRSRRSRNKQEKPAS 730
+E QPP A+P + GK ++ + +K + +S
Sbjct: 1305 SLPKEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKEDDKSDTSSS 1351
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 54.7 bits (130), Expect = 3e-07
Identities = 72/275 (26%), Positives = 102/275 (37%), Gaps = 53/275 (19%)
Query: 470 SKEGAAEPEPQSLPPSNLSGSSEQQPD-INLDLSPLTLGSPQNHTLQAPGEPAPPWAEMR 528
S+ G A+P Q PS L+ QQP + + P P L PA P A+
Sbjct: 324 SQPGPAKPPAQ---PSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLG----PAKPPAQQT 376
Query: 529 GPHPPWTEVRGP-----PPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKE 583
G P +E GP PPG+ G P V TPKP +++P +
Sbjct: 377 GSEKPSSEQPGPKALAQPPGV----GKTPAQQPGPAKPPTQQVGTPKP---LAQQPGLQS 429
Query: 584 VPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAP-RPPASLEVPSAKGQVAGPKQPG 642
PV G + +Q K S P +PP+ L P+ P+QPG
Sbjct: 430 PAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPP----PQQPG 485
Query: 643 RVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWR---NWPGEAKARPQEQES 699
++P P GS K ++ S + PG AK PQ+ S
Sbjct: 486 P-------------------AKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGS 526
Query: 700 VQP----PGPARPQSLPQGKGRSRRSRNKQEKPAS 730
+P PG A+P + Q ++ S + KP S
Sbjct: 527 TKPPSQQPGSAKPSA--QQPSPAKPSAQQSTKPVS 559
Score = 47.0 bits (110), Expect = 7e-05
Identities = 133/601 (22%), Positives = 196/601 (32%), Gaps = 111/601 (18%)
Query: 112 PPTIPGE-AFPVSEHHQHSDLTAPPNS------PTGHHPQPASLIPSHPSSFGSPPH-PH 163
P IP + A P Q + T PP+ P P PA P P S P P
Sbjct: 446 PGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPG 505
Query: 164 LLPTTPAAPFPAQASECPVAAATAPHTPGPCQS-SHLPSTSMPLLKMPPPFSGCSHPCSG 222
P P PA+ S P PG + S P ++ P + P P + +
Sbjct: 506 STKPPPQQPGPAKPS---------PQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTK 556
Query: 223 HCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADEGLGEEEDSSS 282
SG L PP+ P S + P GL + C E L + ++
Sbjct: 557 PVSQTGSGKPLQPPTVSP--SAKQPPS--------QGLPKTICPLCNTTELLLHVPEKAN 606
Query: 283 ERSSCTSSST------------HQRDGKFCDCCYCEFF----GHNAP-PAAP-------- 317
++CT T H + K C C+ G AP P++P
Sbjct: 607 F-NTCTECQTTVCSLCGFNPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKLKTAP 665
Query: 318 ----------------TSRNYTEIREKLRSRLTRRKEELPM-KGGTLGGIPGEPAVDHRD 360
TS ++ S+ K+ P+ K TL G P A +
Sbjct: 666 VTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPE 725
Query: 361 VDELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLAAEALKQANRVSGSREPRPAR 420
D L + EP VP+ E++KA +A + KQ V + + +
Sbjct: 726 ADSLSKPAPPKEPSVPS---------------EQDKAPVADDKPKQPKMVKPTTDLVSSS 770
Query: 421 ERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQ 480
+ PD +V S + T DS + S S + F + P
Sbjct: 771 SATTK-PDIPSSKVQSQAEEKTTPPLKT--DSAKPSQSFPPTGEKVSPFDSKAIPRPASD 827
Query: 481 SLPPSNLSGSSEQQPDINLD--------LSPLTLGSPQNHTLQAP-GEPAPPWAEMRGPH 531
S S+ SSE + +D T SP+ P G P PP GP
Sbjct: 828 SKIISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPP-----GPR 882
Query: 532 PPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEV---PSCK 588
P + P RR + NL + +P P E + K S
Sbjct: 883 PTAGQTVPTPQQSPKPQEQSRRFSL--NLGSITDAPKSQPTTPQ-ETVTGKLFGFGASIF 939
Query: 589 QELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELP 648
+ +S+ G+P + G A +A +PP S P + GQ P P + + +
Sbjct: 940 SQASNLISTAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQ--APPAPAKSIPVK 997
Query: 649 K 649
K
Sbjct: 998 K 998
Score = 46.2 bits (108), Expect = 1e-04
Identities = 89/426 (20%), Positives = 147/426 (34%), Gaps = 64/426 (15%)
Query: 336 RKEEL----PMKGGTLGGIPGEPAVDHRDVDELLEFINSTEPKVPN---SARAAKRARHK 388
RK+EL P K PG PA + S E K+P S + K ++ +
Sbjct: 83 RKQELDSSHPPKQSGRPPDPGRPAQPGLSKSRTTDTFRS-EQKLPGRSPSTISLKESKSR 141
Query: 389 LKKKEKEKAQLAAEALKQANRVSGSREPRPARERLLEWPDRELDRVNSF---LSSRLQEI 445
KE+ K+ + L + N +S +++ N F S +
Sbjct: 142 TDLKEEHKSSMMPGFLSEVNALSAVSSV--------------VNKFNPFDLISDSEASQE 187
Query: 446 KNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQSLPPSNLSGSSEQQPD-INLDLSPL 504
+ T K + + EG +P Q PP + D + D +P
Sbjct: 188 ETTKKQKV----------VQKEQGKPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPK 237
Query: 505 TLGSPQNHTL--QAPGEPAPPWAEMRGPHPPWTEVRGPPPGIVPEN---GLVRRLNTVPN 559
++ S Q + Q PG P + P ++ P+ +VR + P+
Sbjct: 238 SISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPS 297
Query: 560 LSRVIW--VKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEAS 617
L ++ P PG P +++P ++ P P +P G + +
Sbjct: 298 LPSPSKPPIQQPTPGKPPAQQPGHEK------SQPGPAKPPAQPS-GLTKPLAQQPGTVK 350
Query: 618 PAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPG--------PGW 669
P +PP + + P+ Q GP +P + S + G + PG PG
Sbjct: 351 PPVQPPGTTKPPA---QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGP 407
Query: 670 AGSPKTEKEKGSSWRNWPG---EAKARPQEQESVQPPGPARPQSLPQGKGRSRRSRNKQE 726
A P + PG AKA + VQ PGP + + G G++ +
Sbjct: 408 AKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPT 467
Query: 727 KPASSL 732
KP S L
Sbjct: 468 KPPSQL 473
Score = 43.5 bits (101), Expect = 8e-04
Identities = 142/687 (20%), Positives = 219/687 (31%), Gaps = 121/687 (17%)
Query: 97 SPHSSGAMPG-SSLGSPPTI-------PGEAFPVSEH-------HQHSDLTAPPNSPTG- 140
S S PG +L PP + PG A P ++ Q L +P +P
Sbjct: 378 SEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPT 437
Query: 141 ----HHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQS 196
P P IP+ + G PT P + P A P A P S
Sbjct: 438 KTPVQQPGPGK-IPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGS 496
Query: 197 SHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQP---LPSTHRDPGCKGH 253
+ PS K PP G + P S G P P S++P PS + +
Sbjct: 497 AKPPSQQPGSTKPPPQQPGPAKP-SPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQST 555
Query: 254 KFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQ------RDGKF-----CDC 302
K + + QP + ++ C +T + F C
Sbjct: 556 KPVSQTGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQT 615
Query: 303 CYCEFFGHNAPPAAPTSRNYTEIREKLRSRLTRRKEELPMKGGTLGGIPGEPAVDHRDVD 362
C G N P + TE++E L ++ GG L +P P
Sbjct: 616 TVCSLCGFNPNP------HLTEVKEWLCLNCQMKR----ALGGDLAPVPSSP-------- 657
Query: 363 ELLEFINSTEPKVPNSARAAKRARHKLKKKEKEKAQLAAEALKQANRVSGSREPRPARER 422
+PK+ + A K + ++ + A KQ S+ P P +
Sbjct: 658 ---------QPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQ----DLSKAPEPKKPP 704
Query: 423 LLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQSL 482
L VK + S A P+ S+
Sbjct: 705 PL------------------------VKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSV 740
Query: 483 PPSN----LSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVR 538
P ++ +QP + + L S P AE + P T+
Sbjct: 741 PSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPLKTDSA 800
Query: 539 GPPPGIVPENGLVRRLNT--VP---NLSRVIWVKTPKPGYPSSEEPSSKEV-PSCKQELP 592
P P V ++ +P + S++I PG PSSE K+V P K+E P
Sbjct: 801 KPSQSFPPTGEKVSPFDSKAIPRPASDSKII----SHPG-PSSESKGQKQVDPVQKKEEP 855
Query: 593 EPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGS 652
+ + P+ + K S P PRP A VP+ + Q P++ R L +GS
Sbjct: 856 KKAQTKMSPKPDAK--PMPKGSPTPPGPRPTAGQTVPTPQ-QSPKPQEQSRRFSL-NLGS 911
Query: 653 CAEAGEGSRGSRPGP-------GWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPGP 705
+A + S+ + P G+ S ++ S PG Q P P
Sbjct: 912 ITDAPK-SQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAPAP 970
Query: 706 ARPQSLPQGKGRSRRSRNKQEKPASSL 732
++P P +G + + PA S+
Sbjct: 971 SQP---PTSQGPPKSTGQAPPAPAKSI 994
Score = 32.0 bits (71), Expect = 2.3
Identities = 53/193 (27%), Positives = 67/193 (34%), Gaps = 30/193 (15%)
Query: 79 DWDPSSFLSAHKLSGLWNSPHSSGAM-----PGSSL--GSPPTIPGEAFPVSEHHQHS-D 130
D PSS ++ L + +SG P S L GSP A P S D
Sbjct: 2341 DHPPSSVIALPMKEQLSTTYFTSGETFGQEKPASQLPSGSPSVSSLPAKPRPFFRSSSLD 2400
Query: 131 LTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVA------- 183
++A P P P P P PP P L P T P + VA
Sbjct: 2401 ISAQPPPPPPPPPPPPPPPPP-------PPPPPLPPPTSPKPTILPKKKLTVASPVTTAT 2453
Query: 184 ----AATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQ 239
A T T +S+ LP T + PP S SG H P PP + +
Sbjct: 2454 PLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPK 2513
Query: 240 P----LPSTHRDP 248
P LP+T + P
Sbjct: 2514 PVIPQLPTTTQKP 2526
Score = 30.4 bits (67), Expect = 6.7
Identities = 35/130 (26%), Positives = 43/130 (33%), Gaps = 11/130 (8%)
Query: 112 PPTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPH-PHLLPTTPA 170
P IP + P + Q P S + P+ I S P G P P P T
Sbjct: 216 PKPIPKQQGPGRDPLQQD---GTPKSISSQQPEK---IKSQPPGTGKPIQGPTQTPQTDH 269
Query: 171 APFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSG 230
A P Q A G LPS S P ++ P P P + G S
Sbjct: 270 AKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTP----GKPPAQQPGHEKSQ 325
Query: 231 PLLPPPSSQP 240
P P +QP
Sbjct: 326 PGPAKPPAQP 335
Score = 30.0 bits (66), Expect = 8.7
Identities = 55/248 (22%), Positives = 75/248 (30%), Gaps = 34/248 (13%)
Query: 9 LGEMPLWVCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGDDSHSSSSSSSSSSSS 68
L E+ W+C +C+ +R G + A S K+ S S SS +S
Sbjct: 629 LTEVKEWLCLNCQM-----KRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTS 683
Query: 69 SSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPVSEHHQH 128
D P LS +P P L PT+ G ++
Sbjct: 684 PKK-------DAAPKQDLS--------KAPEPKKPPP---LVKQPTLHGSPSAKAKQPPE 725
Query: 129 SDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAP 188
+D + P P PS PS P P P P +A T P
Sbjct: 726 ADSLSKPAPPKE---------PSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKP 776
Query: 189 HTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQPLPSTHRDP 248
P S + P LK S P +G +P P+S +H P
Sbjct: 777 DIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGP 836
Query: 249 G--CKGHK 254
KG K
Sbjct: 837 SSESKGQK 844
Score = 30.0 bits (66), Expect = 8.7
Identities = 38/167 (22%), Positives = 59/167 (35%), Gaps = 25/167 (14%)
Query: 577 EEPSSKEVPSCKQEL-PEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQV 635
E K+ S QE P P P++ K + + K P P +P AK
Sbjct: 1197 ESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTPEDKKLLPEAK--T 1254
Query: 636 AGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQ 695
+ P++ L +V E EG +PKT +E G PQ
Sbjct: 1255 SAPEEQKHDLLKSQVQIAEEKLEGRV----------APKTVQEGKQPQTKMEGLPSGTPQ 1304
Query: 696 E------------QESVQPPGPARPQSLPQGKGRSRRSRNKQEKPAS 730
+E QPP A+P + GK ++ + +K + +S
Sbjct: 1305 SLPKEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKEDDKSDTSSS 1351
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 54.3 bits (129), Expect = 4e-07
Identities = 53/199 (26%), Positives = 71/199 (35%), Gaps = 28/199 (14%)
Query: 65 SSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSP-PTIPGEAFPVS 123
SS + S P G PS + G + G++ S L S P P +
Sbjct: 196 SSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPT 255
Query: 124 EHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVA 183
D PP P G+ P H + PP + P P+ P P+ +S+ P
Sbjct: 256 PSRALDDKPPPPPPPVGNRPS------IHREAVPPPPPQNNKPPVPSTPRPSASSQAP-P 308
Query: 184 AATAPHTPGPC----------QSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLL 233
P PGP ++ LP ++ L PP P G SGPL
Sbjct: 309 PPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPL-----PSPGR-----SGPLP 358
Query: 234 PPPSSQPLPSTHRDPGCKG 252
PPPS +P P PG G
Sbjct: 359 PPPSERPPPPVRDPPGRSG 377
Score = 39.3 bits (90), Expect = 0.014
Identities = 49/177 (27%), Positives = 65/177 (36%), Gaps = 35/177 (19%)
Query: 476 EPEPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWT 535
+P P P N +P I+ + P PQN+ P P P + P PP
Sbjct: 263 KPPPPPPPVGN-------RPSIHREAVPPP--PPQNNKPPVPSTPRPSASSQAPPPPPPP 313
Query: 536 EVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKT---PKPGY------PSSEEPSS--KEV 584
GPPP + P + +P + + T P PG P SE P ++
Sbjct: 314 SRPGPPP-LPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDP 372
Query: 585 PSCKQEL--PEPVSSGGK--------PQKGKRQGSQAKKSEASPAPRPPASLEVPSA 631
P L P PVS G PQ R G + +S PRPP + PSA
Sbjct: 373 PGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRS----GPRPPLPPDRPSA 425
Score = 30.8 bits (68), Expect = 5.1
Identities = 49/168 (29%), Positives = 56/168 (33%), Gaps = 42/168 (25%)
Query: 111 SPPTIPGEAFPVSEHHQHS---------------DLTAPPNSPTGHHPQPASLIPSHPSS 155
SPP+ PG FPV S D+ + P+S P I S P +
Sbjct: 142 SPPSGPGR-FPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHN 200
Query: 156 FGSPP------HPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSH-------LPST 202
GSPP P PT P PFP A P SS LP T
Sbjct: 201 RGSPPVPGGPRQPSPGPTPP--PFPGNRG---TALGGGSIRQSPLSSSSPFSNRPPLPPT 255
Query: 203 SMPLL--KMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQ--PLPSTHR 246
L K PPP P H PPP + P+PST R
Sbjct: 256 PSRALDDKPPPP----PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPR 299
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 54.3 bits (129), Expect = 4e-07
Identities = 53/199 (26%), Positives = 71/199 (35%), Gaps = 28/199 (14%)
Query: 65 SSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSP-PTIPGEAFPVS 123
SS + S P G PS + G + G++ S L S P P +
Sbjct: 196 SSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPT 255
Query: 124 EHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVA 183
D PP P G+ P H + PP + P P+ P P+ +S+ P
Sbjct: 256 PSRALDDKPPPPPPPVGNRPS------IHREAVPPPPPQNNKPPVPSTPRPSASSQAP-P 308
Query: 184 AATAPHTPGPC----------QSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLL 233
P PGP ++ LP ++ L PP P G SGPL
Sbjct: 309 PPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPL-----PSPGR-----SGPLP 358
Query: 234 PPPSSQPLPSTHRDPGCKG 252
PPPS +P P PG G
Sbjct: 359 PPPSERPPPPVRDPPGRSG 377
Score = 39.3 bits (90), Expect = 0.014
Identities = 49/177 (27%), Positives = 65/177 (36%), Gaps = 35/177 (19%)
Query: 476 EPEPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWT 535
+P P P N +P I+ + P PQN+ P P P + P PP
Sbjct: 263 KPPPPPPPVGN-------RPSIHREAVPPP--PPQNNKPPVPSTPRPSASSQAPPPPPPP 313
Query: 536 EVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKT---PKPGY------PSSEEPSS--KEV 584
GPPP + P + +P + + T P PG P SE P ++
Sbjct: 314 SRPGPPP-LPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDP 372
Query: 585 PSCKQEL--PEPVSSGGK--------PQKGKRQGSQAKKSEASPAPRPPASLEVPSA 631
P L P PVS G PQ R G + +S PRPP + PSA
Sbjct: 373 PGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRS----GPRPPLPPDRPSA 425
Score = 30.8 bits (68), Expect = 5.1
Identities = 49/168 (29%), Positives = 56/168 (33%), Gaps = 42/168 (25%)
Query: 111 SPPTIPGEAFPVSEHHQHS---------------DLTAPPNSPTGHHPQPASLIPSHPSS 155
SPP+ PG FPV S D+ + P+S P I S P +
Sbjct: 142 SPPSGPGR-FPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHN 200
Query: 156 FGSPP------HPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSH-------LPST 202
GSPP P PT P PFP A P SS LP T
Sbjct: 201 RGSPPVPGGPRQPSPGPTPP--PFPGNRG---TALGGGSIRQSPLSSSSPFSNRPPLPPT 255
Query: 203 SMPLL--KMPPPFSGCSHPCSGHCGGHCSGPLLPPPSSQ--PLPSTHR 246
L K PPP P H PPP + P+PST R
Sbjct: 256 PSRALDDKPPPP----PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPR 299
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 53.1 bits (126), Expect = 1e-06
Identities = 57/192 (29%), Positives = 68/192 (35%), Gaps = 20/192 (10%)
Query: 60 SSSSSSSSSSSSSCPGNSGDWDPSSF-LSAHKLSGLWNSPHSSGAMPGSSLGSPP--TIP 116
+ S+ S+ S + P G P L A L P G P +S G P T P
Sbjct: 276 TGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSP 335
Query: 117 GEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQ 176
A+P H+ L P + QP P P+ P H PTTP PA
Sbjct: 336 AAAYP------HTSLQLPASQSALQSQQPPREQPLPPAPLAMP-HIKPPPTTPIPQLPA- 387
Query: 177 ASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPP 236
P A PH GP S + P P HP S H PL P
Sbjct: 388 ----PQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAH-----PPPLQLMP 438
Query: 237 SSQPLPSTHRDP 248
SQPLPS+ P
Sbjct: 439 QSQPLPSSPAQP 450
Score = 45.4 bits (106), Expect = 2e-04
Identities = 84/341 (24%), Positives = 111/341 (32%), Gaps = 91/341 (26%)
Query: 45 SCKSQSCGDDSHSSSSSSSSSSSSSSSSCPG---NSGDWDPSS---FLSAHK---LSGLW 95
S S+S D+ S + S+S S P N D D S+ L A +
Sbjct: 133 SSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTG 192
Query: 96 NSPHSSGAMPGS-SLGSP-PTIPGEAFPVSEHHQHSDLTAPPNSPTG-----HHPQPASL 148
+P S A PG+ L +P PT A P S P +PT H Q +L
Sbjct: 193 VTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPAL 252
Query: 149 IPSHPSSFGSPPHPH----LLPTT-----PAAP--------------------------- 172
P P S PPHP L P T P+AP
Sbjct: 253 HPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHP 312
Query: 173 -------FPAQASECPVAAATAPHTPGPCQSSHLPST--------------------SMP 205
P QAS+ T+P P S LP++ +MP
Sbjct: 313 GPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP 372
Query: 206 LLKMPP--PFSGCSHPCSGHCGGHCSGP--------LLPPPSSQPLP--STHRDPGCKGH 253
+K PP P P + H SGP L PPP+ +PL STH P
Sbjct: 373 HIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPP 432
Query: 254 KFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQ 294
+ LP GL + ++ +S + HQ
Sbjct: 433 PLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQ 473
Score = 45.4 bits (106), Expect = 2e-04
Identities = 55/185 (29%), Positives = 66/185 (35%), Gaps = 52/185 (28%)
Query: 98 PHSSGAMPGSSLGSPPTIPGEAFPVSEHHQH-------------SDLTAPP--------- 135
P + AMP + PPT P P + H+H ++L PP
Sbjct: 365 PPAPLAMP--HIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLS 422
Query: 136 -NSPTGHHPQPASLIPSH---PSSFGSPP---HPHLLPTTPA----------APFPAQAS 178
+ P HP P L+P PSS PP LP PA AP P A
Sbjct: 423 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQ 482
Query: 179 ECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSS 238
V P TP C PSTS P P + PCS G SG + SS
Sbjct: 483 HPFVPGGPPPITPPTC-----PSTSTP---PAGPGTSAQPPCS---GAAASGGSIAGGSS 531
Query: 239 QPLPS 243
PLP+
Sbjct: 532 CPLPT 536
Score = 41.2 bits (95), Expect = 0.004
Identities = 61/259 (23%), Positives = 83/259 (32%), Gaps = 48/259 (18%)
Query: 24 MEEDERQTGREHAVAISLSHTSCKSQSCGDDSHSSSSSSSSSSSSSSSSCPGNSGDWDPS 83
+ ED R +GR A S S K+++ + +SS S+ + D + +
Sbjct: 48 INEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEA 107
Query: 84 SFLSAHKLSGLWNS-PHSSGAMPGSSLGS---------------------PPTIP----G 117
S+ K S P+S G S S P+IP
Sbjct: 108 DRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDN 167
Query: 118 EAFPVSEHHQHSDLTAPP--NSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPA 175
E+ S Q PP +PTG P P+S P G+P P PT A P
Sbjct: 168 ESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPP------GTPQLPTPGPTPSATAVPP 221
Query: 176 QASECPVAAATAPHTP-GPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLP 234
Q S A P P P +H+ + PP HP P
Sbjct: 222 QGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPS-------------P 268
Query: 235 PPSSQPLPSTHRDPGCKGH 253
P QPL + P H
Sbjct: 269 HPPLQPLTGSAGQPSAPSH 287
Score = 31.2 bits (69), Expect = 3.9
Identities = 74/370 (20%), Positives = 123/370 (33%), Gaps = 49/370 (13%)
Query: 390 KKKEKEKAQLAAEALKQANRVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTV 449
+KK+ + + R SG P A D + + V +E + +
Sbjct: 34 RKKQPASPDGRTSPINEDIRSSGRNSPSAASTSS---NDSKAETVKKSAKKVKEEASSPL 90
Query: 450 KDSIRASFSVCELSMDSNGFSKEGAAEPE---PQSLPPSNLSGSSEQQPDINLDLSPLTL 506
K + R V + +++ S + E P S PS G S +N + S
Sbjct: 91 KSNKRQREKVASDTEEADRTSSKKTKTQEISRPNS--PSEGEGESSDSRSVNDEGSSDPK 148
Query: 507 GSPQNHTLQAPGEPAPPWAEMRGPHPPWTEV-RGPPPGIVPENGLVRRLNTVPNLSRVIW 565
Q++ +P P+P E ++ + PP + G+ ++ P + +
Sbjct: 149 DIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLP 208
Query: 566 VKTPKPG---YPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRP 622
P P P P++ + P+ Q PV P +Q + A + P+P P
Sbjct: 209 TPGPTPSATAVPPQGSPTASQAPNQPQAPTAPV-----PHTHIQQ-APALHPQRPPSPHP 262
Query: 623 PASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSS 682
P PS P P + P GS + S P G G P
Sbjct: 263 PPH---PS-------PHPPLQ----PLTGSAGQPSAPSHAQPPLHG-QGPPG-------- 299
Query: 683 WRNWPGEAKARPQEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPKDMD 742
P +A P +Q PGP +P LP + + A + LP
Sbjct: 300 ----PHSLQAGPL----LQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQS 351
Query: 743 GVEMDETDRE 752
++ + RE
Sbjct: 352 ALQSQQPPRE 361
Score = 30.8 bits (68), Expect = 5.1
Identities = 104/500 (20%), Positives = 163/500 (32%), Gaps = 102/500 (20%)
Query: 269 EADEGLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREK 328
E D+GL + + RS + S+ G PA+P R + I E
Sbjct: 7 EEDDGLSGKHSMRTRRSRGSMSTLRS--------------GRKKQPASPDGRT-SPINED 51
Query: 329 LRSRLTRRKEELPMKGGTLGGIPGEPAVDHRDVDELLEFINSTEPKVPNSARAAKRARHK 388
+RS G A D E + + KV A +
Sbjct: 52 IRS----------------SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSP------ 89
Query: 389 LKKKEKEKAQLAAEALKQANRVSGSREP-----RPARERLLEWPDRELDRVNSFLSSRLQ 443
LK ++++ ++A++ ++A+R S + RP E + VN SS +
Sbjct: 90 LKSNKRQREKVASDT-EEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPK 148
Query: 444 EIKNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQSLP--------PSNLSGSSEQQP 495
+I + + + S + DS+ +++ + +P +L PS+ + Q P
Sbjct: 149 DIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLP 208
Query: 496 DINLDLSPLTL---GSPQNHTLQAPGEPAPPWAEMR----------------GPHPPWTE 536
S + GSP QAP +P P A + PHPP
Sbjct: 209 TPGPTPSATAVPPQGSPT--ASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPP--P 264
Query: 537 VRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQE--LPEP 594
P P + P G + + + + + P PG S + + P Q LP
Sbjct: 265 HPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGP-PGPHSLQAGPLLQHPGPPQPFGLPPQ 323
Query: 595 VSSGGKP--------------QKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQ 640
S G P Q Q + + P PPA L +P K P
Sbjct: 324 ASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPP---PTT 380
Query: 641 PGRVLELPKVGSCAEAGEG----SRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQE 696
P L P+ G S + P A P + P + PQ
Sbjct: 381 PIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQS 440
Query: 697 Q----ESVQPPGPARPQSLP 712
Q QPPG + Q+LP
Sbjct: 441 QPLPSSPAQPPGLTQSQNLP 460
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 53.1 bits (126), Expect = 1e-06
Identities = 57/192 (29%), Positives = 68/192 (35%), Gaps = 20/192 (10%)
Query: 60 SSSSSSSSSSSSSCPGNSGDWDPSSF-LSAHKLSGLWNSPHSSGAMPGSSLGSPP--TIP 116
+ S+ S+ S + P G P L A L P G P +S G P T P
Sbjct: 830 TGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSP 889
Query: 117 GEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQ 176
A+P H+ L P + QP P P+ P H PTTP PA
Sbjct: 890 AAAYP------HTSLQLPASQSALQSQQPPREQPLPPAPLAMP-HIKPPPTTPIPQLPA- 941
Query: 177 ASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPP 236
P A PH GP S + P P HP S H PL P
Sbjct: 942 ----PQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAH-----PPPLQLMP 992
Query: 237 SSQPLPSTHRDP 248
SQPLPS+ P
Sbjct: 993 QSQPLPSSPAQP 1004
Score = 45.4 bits (106), Expect = 2e-04
Identities = 84/341 (24%), Positives = 111/341 (32%), Gaps = 91/341 (26%)
Query: 45 SCKSQSCGDDSHSSSSSSSSSSSSSSSSCPG---NSGDWDPSS---FLSAHK---LSGLW 95
S S+S D+ S + S+S S P N D D S+ L A +
Sbjct: 687 SSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTG 746
Query: 96 NSPHSSGAMPGS-SLGSP-PTIPGEAFPVSEHHQHSDLTAPPNSPTG-----HHPQPASL 148
+P S A PG+ L +P PT A P S P +PT H Q +L
Sbjct: 747 VTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPAL 806
Query: 149 IPSHPSSFGSPPHPH----LLPTT-----PAAP--------------------------- 172
P P S PPHP L P T P+AP
Sbjct: 807 HPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHP 866
Query: 173 -------FPAQASECPVAAATAPHTPGPCQSSHLPST--------------------SMP 205
P QAS+ T+P P S LP++ +MP
Sbjct: 867 GPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP 926
Query: 206 LLKMPP--PFSGCSHPCSGHCGGHCSGP--------LLPPPSSQPLP--STHRDPGCKGH 253
+K PP P P + H SGP L PPP+ +PL STH P
Sbjct: 927 HIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPP 986
Query: 254 KFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQ 294
+ LP GL + ++ +S + HQ
Sbjct: 987 PLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQ 1027
Score = 45.4 bits (106), Expect = 2e-04
Identities = 55/185 (29%), Positives = 66/185 (35%), Gaps = 52/185 (28%)
Query: 98 PHSSGAMPGSSLGSPPTIPGEAFPVSEHHQH-------------SDLTAPP--------- 135
P + AMP + PPT P P + H+H ++L PP
Sbjct: 919 PPAPLAMP--HIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLS 976
Query: 136 -NSPTGHHPQPASLIPSH---PSSFGSPP---HPHLLPTTPA----------APFPAQAS 178
+ P HP P L+P PSS PP LP PA AP P A
Sbjct: 977 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQ 1036
Query: 179 ECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSS 238
V P TP C PSTS P P + PCS G SG + SS
Sbjct: 1037 HPFVPGGPPPITPPTC-----PSTSTP---PAGPGTSAQPPCS---GAAASGGSIAGGSS 1085
Query: 239 QPLPS 243
PLP+
Sbjct: 1086 CPLPT 1090
Score = 41.2 bits (95), Expect = 0.004
Identities = 61/259 (23%), Positives = 83/259 (32%), Gaps = 48/259 (18%)
Query: 24 MEEDERQTGREHAVAISLSHTSCKSQSCGDDSHSSSSSSSSSSSSSSSSCPGNSGDWDPS 83
+ ED R +GR A S S K+++ + +SS S+ + D + +
Sbjct: 602 INEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEA 661
Query: 84 SFLSAHKLSGLWNS-PHSSGAMPGSSLGS---------------------PPTIP----G 117
S+ K S P+S G S S P+IP
Sbjct: 662 DRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDN 721
Query: 118 EAFPVSEHHQHSDLTAPP--NSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPA 175
E+ S Q PP +PTG P P+S P G+P P PT A P
Sbjct: 722 ESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPP------GTPQLPTPGPTPSATAVPP 775
Query: 176 QASECPVAAATAPHTP-GPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLP 234
Q S A P P P +H+ + PP HP P
Sbjct: 776 QGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPS-------------P 822
Query: 235 PPSSQPLPSTHRDPGCKGH 253
P QPL + P H
Sbjct: 823 HPPLQPLTGSAGQPSAPSH 841
Score = 31.2 bits (69), Expect = 3.9
Identities = 74/370 (20%), Positives = 123/370 (33%), Gaps = 49/370 (13%)
Query: 390 KKKEKEKAQLAAEALKQANRVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTV 449
+KK+ + + R SG P A D + + V +E + +
Sbjct: 588 RKKQPASPDGRTSPINEDIRSSGRNSPSAASTSS---NDSKAETVKKSAKKVKEEASSPL 644
Query: 450 KDSIRASFSVCELSMDSNGFSKEGAAEPE---PQSLPPSNLSGSSEQQPDINLDLSPLTL 506
K + R V + +++ S + E P S PS G S +N + S
Sbjct: 645 KSNKRQREKVASDTEEADRTSSKKTKTQEISRPNS--PSEGEGESSDSRSVNDEGSSDPK 702
Query: 507 GSPQNHTLQAPGEPAPPWAEMRGPHPPWTEV-RGPPPGIVPENGLVRRLNTVPNLSRVIW 565
Q++ +P P+P E ++ + PP + G+ ++ P + +
Sbjct: 703 DIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLP 762
Query: 566 VKTPKPG---YPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRP 622
P P P P++ + P+ Q PV P +Q + A + P+P P
Sbjct: 763 TPGPTPSATAVPPQGSPTASQAPNQPQAPTAPV-----PHTHIQQ-APALHPQRPPSPHP 816
Query: 623 PASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSS 682
P PS P P + P GS + S P G G P
Sbjct: 817 PPH---PS-------PHPPLQ----PLTGSAGQPSAPSHAQPPLHG-QGPPG-------- 853
Query: 683 WRNWPGEAKARPQEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPKDMD 742
P +A P +Q PGP +P LP + + A + LP
Sbjct: 854 ----PHSLQAGPL----LQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQS 905
Query: 743 GVEMDETDRE 752
++ + RE
Sbjct: 906 ALQSQQPPRE 915
Score = 30.8 bits (68), Expect = 5.1
Identities = 104/500 (20%), Positives = 163/500 (32%), Gaps = 102/500 (20%)
Query: 269 EADEGLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREK 328
E D+GL + + RS + S+ G PA+P R + I E
Sbjct: 561 EEDDGLSGKHSMRTRRSRGSMSTLRS--------------GRKKQPASPDGRT-SPINED 605
Query: 329 LRSRLTRRKEELPMKGGTLGGIPGEPAVDHRDVDELLEFINSTEPKVPNSARAAKRARHK 388
+RS G A D E + + KV A +
Sbjct: 606 IRS----------------SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSP------ 643
Query: 389 LKKKEKEKAQLAAEALKQANRVSGSREP-----RPARERLLEWPDRELDRVNSFLSSRLQ 443
LK ++++ ++A++ ++A+R S + RP E + VN SS +
Sbjct: 644 LKSNKRQREKVASDT-EEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPK 702
Query: 444 EIKNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQSLP--------PSNLSGSSEQQP 495
+I + + + S + DS+ +++ + +P +L PS+ + Q P
Sbjct: 703 DIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLP 762
Query: 496 DINLDLSPLTL---GSPQNHTLQAPGEPAPPWAEMR----------------GPHPPWTE 536
S + GSP QAP +P P A + PHPP
Sbjct: 763 TPGPTPSATAVPPQGSPT--ASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPP--P 818
Query: 537 VRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQE--LPEP 594
P P + P G + + + + + P PG S + + P Q LP
Sbjct: 819 HPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGP-PGPHSLQAGPLLQHPGPPQPFGLPPQ 877
Query: 595 VSSGGKP--------------QKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQ 640
S G P Q Q + + P PPA L +P K P
Sbjct: 878 ASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPP---PTT 934
Query: 641 PGRVLELPKVGSCAEAGEG----SRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQE 696
P L P+ G S + P A P + P + PQ
Sbjct: 935 PIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQS 994
Query: 697 Q----ESVQPPGPARPQSLP 712
Q QPPG + Q+LP
Sbjct: 995 QPLPSSPAQPPGLTQSQNLP 1014
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 53.1 bits (126), Expect = 1e-06
Identities = 57/192 (29%), Positives = 68/192 (35%), Gaps = 20/192 (10%)
Query: 60 SSSSSSSSSSSSSCPGNSGDWDPSSF-LSAHKLSGLWNSPHSSGAMPGSSLGSPP--TIP 116
+ S+ S+ S + P G P L A L P G P +S G P T P
Sbjct: 830 TGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSP 889
Query: 117 GEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQ 176
A+P H+ L P + QP P P+ P H PTTP PA
Sbjct: 890 AAAYP------HTSLQLPASQSALQSQQPPREQPLPPAPLAMP-HIKPPPTTPIPQLPA- 941
Query: 177 ASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPP 236
P A PH GP S + P P HP S H PL P
Sbjct: 942 ----PQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAH-----PPPLQLMP 992
Query: 237 SSQPLPSTHRDP 248
SQPLPS+ P
Sbjct: 993 QSQPLPSSPAQP 1004
Score = 45.4 bits (106), Expect = 2e-04
Identities = 84/341 (24%), Positives = 111/341 (32%), Gaps = 91/341 (26%)
Query: 45 SCKSQSCGDDSHSSSSSSSSSSSSSSSSCPG---NSGDWDPSS---FLSAHK---LSGLW 95
S S+S D+ S + S+S S P N D D S+ L A +
Sbjct: 687 SSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTG 746
Query: 96 NSPHSSGAMPGS-SLGSP-PTIPGEAFPVSEHHQHSDLTAPPNSPTG-----HHPQPASL 148
+P S A PG+ L +P PT A P S P +PT H Q +L
Sbjct: 747 VTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPAL 806
Query: 149 IPSHPSSFGSPPHPH----LLPTT-----PAAP--------------------------- 172
P P S PPHP L P T P+AP
Sbjct: 807 HPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHP 866
Query: 173 -------FPAQASECPVAAATAPHTPGPCQSSHLPST--------------------SMP 205
P QAS+ T+P P S LP++ +MP
Sbjct: 867 GPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP 926
Query: 206 LLKMPP--PFSGCSHPCSGHCGGHCSGP--------LLPPPSSQPLP--STHRDPGCKGH 253
+K PP P P + H SGP L PPP+ +PL STH P
Sbjct: 927 HIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPP 986
Query: 254 KFAHSGLACQLPQPCEADEGLGEEEDSSSERSSCTSSSTHQ 294
+ LP GL + ++ +S + HQ
Sbjct: 987 PLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQ 1027
Score = 45.4 bits (106), Expect = 2e-04
Identities = 55/185 (29%), Positives = 66/185 (35%), Gaps = 52/185 (28%)
Query: 98 PHSSGAMPGSSLGSPPTIPGEAFPVSEHHQH-------------SDLTAPP--------- 135
P + AMP + PPT P P + H+H ++L PP
Sbjct: 919 PPAPLAMP--HIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLS 976
Query: 136 -NSPTGHHPQPASLIPSH---PSSFGSPP---HPHLLPTTPA----------APFPAQAS 178
+ P HP P L+P PSS PP LP PA AP P A
Sbjct: 977 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQ 1036
Query: 179 ECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPSS 238
V P TP C PSTS P P + PCS G SG + SS
Sbjct: 1037 HPFVPGGPPPITPPTC-----PSTSTP---PAGPGTSAQPPCS---GAAASGGSIAGGSS 1085
Query: 239 QPLPS 243
PLP+
Sbjct: 1086 CPLPT 1090
Score = 41.2 bits (95), Expect = 0.004
Identities = 61/259 (23%), Positives = 83/259 (32%), Gaps = 48/259 (18%)
Query: 24 MEEDERQTGREHAVAISLSHTSCKSQSCGDDSHSSSSSSSSSSSSSSSSCPGNSGDWDPS 83
+ ED R +GR A S S K+++ + +SS S+ + D + +
Sbjct: 602 INEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEA 661
Query: 84 SFLSAHKLSGLWNS-PHSSGAMPGSSLGS---------------------PPTIP----G 117
S+ K S P+S G S S P+IP
Sbjct: 662 DRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDN 721
Query: 118 EAFPVSEHHQHSDLTAPP--NSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPA 175
E+ S Q PP +PTG P P+S P G+P P PT A P
Sbjct: 722 ESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPP------GTPQLPTPGPTPSATAVPP 775
Query: 176 QASECPVAAATAPHTP-GPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLP 234
Q S A P P P +H+ + PP HP P
Sbjct: 776 QGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPS-------------P 822
Query: 235 PPSSQPLPSTHRDPGCKGH 253
P QPL + P H
Sbjct: 823 HPPLQPLTGSAGQPSAPSH 841
Score = 31.2 bits (69), Expect = 3.9
Identities = 74/370 (20%), Positives = 123/370 (33%), Gaps = 49/370 (13%)
Query: 390 KKKEKEKAQLAAEALKQANRVSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTV 449
+KK+ + + R SG P A D + + V +E + +
Sbjct: 588 RKKQPASPDGRTSPINEDIRSSGRNSPSAASTSS---NDSKAETVKKSAKKVKEEASSPL 644
Query: 450 KDSIRASFSVCELSMDSNGFSKEGAAEPE---PQSLPPSNLSGSSEQQPDINLDLSPLTL 506
K + R V + +++ S + E P S PS G S +N + S
Sbjct: 645 KSNKRQREKVASDTEEADRTSSKKTKTQEISRPNS--PSEGEGESSDSRSVNDEGSSDPK 702
Query: 507 GSPQNHTLQAPGEPAPPWAEMRGPHPPWTEV-RGPPPGIVPENGLVRRLNTVPNLSRVIW 565
Q++ +P P+P E ++ + PP + G+ ++ P + +
Sbjct: 703 DIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLP 762
Query: 566 VKTPKPG---YPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRP 622
P P P P++ + P+ Q PV P +Q + A + P+P P
Sbjct: 763 TPGPTPSATAVPPQGSPTASQAPNQPQAPTAPV-----PHTHIQQ-APALHPQRPPSPHP 816
Query: 623 PASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSS 682
P PS P P + P GS + S P G G P
Sbjct: 817 PPH---PS-------PHPPLQ----PLTGSAGQPSAPSHAQPPLHG-QGPPG-------- 853
Query: 683 WRNWPGEAKARPQEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPASSLDDVFLPKDMD 742
P +A P +Q PGP +P LP + + A + LP
Sbjct: 854 ----PHSLQAGPL----LQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQS 905
Query: 743 GVEMDETDRE 752
++ + RE
Sbjct: 906 ALQSQQPPRE 915
Score = 30.8 bits (68), Expect = 5.1
Identities = 104/500 (20%), Positives = 163/500 (32%), Gaps = 102/500 (20%)
Query: 269 EADEGLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYCEFFGHNAPPAAPTSRNYTEIREK 328
E D+GL + + RS + S+ G PA+P R + I E
Sbjct: 561 EEDDGLSGKHSMRTRRSRGSMSTLRS--------------GRKKQPASPDGRT-SPINED 605
Query: 329 LRSRLTRRKEELPMKGGTLGGIPGEPAVDHRDVDELLEFINSTEPKVPNSARAAKRARHK 388
+RS G A D E + + KV A +
Sbjct: 606 IRS----------------SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSP------ 643
Query: 389 LKKKEKEKAQLAAEALKQANRVSGSREP-----RPARERLLEWPDRELDRVNSFLSSRLQ 443
LK ++++ ++A++ ++A+R S + RP E + VN SS +
Sbjct: 644 LKSNKRQREKVASDT-EEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPK 702
Query: 444 EIKNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQSLP--------PSNLSGSSEQQP 495
+I + + + S + DS+ +++ + +P +L PS+ + Q P
Sbjct: 703 DIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLP 762
Query: 496 DINLDLSPLTL---GSPQNHTLQAPGEPAPPWAEMR----------------GPHPPWTE 536
S + GSP QAP +P P A + PHPP
Sbjct: 763 TPGPTPSATAVPPQGSPT--ASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPP--P 818
Query: 537 VRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQE--LPEP 594
P P + P G + + + + + P PG S + + P Q LP
Sbjct: 819 HPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGP-PGPHSLQAGPLLQHPGPPQPFGLPPQ 877
Query: 595 VSSGGKP--------------QKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQ 640
S G P Q Q + + P PPA L +P K P
Sbjct: 878 ASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPP---PTT 934
Query: 641 PGRVLELPKVGSCAEAGEG----SRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQE 696
P L P+ G S + P A P + P + PQ
Sbjct: 935 PIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQS 994
Query: 697 Q----ESVQPPGPARPQSLP 712
Q QPPG + Q+LP
Sbjct: 995 QPLPSSPAQPPGLTQSQNLP 1014
>gi|13128980 proline rich 14 [Homo sapiens]
Length = 585
Score = 53.1 bits (126), Expect = 1e-06
Identities = 62/211 (29%), Positives = 83/211 (39%), Gaps = 24/211 (11%)
Query: 98 PHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFG 157
P A+P L SPPT P A + S L P SP G P S + S SF
Sbjct: 203 PFQPSALPADPLESPPTAPDPALELPSTPPPSSLLRPRLSPWGLAPLFRS-VRSKLESFA 261
Query: 158 S---PPHPHLLPTTPAAPFP-------AQASECPVAAATAPHTP-GPCQSSHLPSTSMPL 206
P+ P P+ P ++A + A TA +P P + + P
Sbjct: 262 DIFLTPNKTPQPPPPSPPMKLELKIAISEAEQSGAAEGTASVSPRPPIRQWRTQDHNTPA 321
Query: 207 LKMPPPFSGCSHPCS--GHCG-GHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQ 263
L +P P G S+ C G G G C+ P PP S+P P H G A
Sbjct: 322 L-LPKPSLGRSYSCPDLGPPGPGTCTWPPAPPQPSRPRPRRHTVGG------GEMARAPP 374
Query: 264 LPQPCEADE--GLGEEEDSSSERSSCTSSST 292
P+PC E LG S S +SC+S+++
Sbjct: 375 PPRPCLRKEVFPLGGVGASPSLTTSCSSTAS 405
>gi|241982729 trinucleotide repeat containing 6B isoform 1 [Homo
sapiens]
Length = 1833
Score = 52.8 bits (125), Expect = 1e-06
Identities = 60/190 (31%), Positives = 73/190 (38%), Gaps = 35/190 (18%)
Query: 510 QNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTP 569
Q+ Q P +P PP E G W GPPP P G VR N+ W P
Sbjct: 819 QHQQQQPPQQPPPPQPEASGS---WG---GPPP---PPPGNVRPSNSS-------WSSGP 862
Query: 570 KPGYPSSEEPSSKEVP-----SCKQELPEPVSSGGKPQ--KGKRQGSQAKKSEASPAPRP 622
+P P EEPS E P S K ++ + S+ G P K K S+ PAPR
Sbjct: 863 QPATPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQGGPAPRE 922
Query: 623 PASLEVP--SAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKG 680
P +L P S V P P G+ A GE + S PGW G
Sbjct: 923 P-NLPTPMTSKSASVWSKSTP----PAPDNGTSA-WGEPNESS---PGW-GEMDDTGAST 972
Query: 681 SSWRNWPGEA 690
+ W N P A
Sbjct: 973 TGWGNTPANA 982
Score = 30.4 bits (67), Expect = 6.7
Identities = 38/156 (24%), Positives = 54/156 (34%), Gaps = 28/156 (17%)
Query: 567 KTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQ--------------AK 612
+ P G+ S + +EV K E SS KP G +G Q A
Sbjct: 736 RQPNQGWSSGKNGWGEEVDQTKNSNWE--SSASKPVSGWGEGGQNEIGTWGNGGNASLAS 793
Query: 613 KSEASPAPRPPASLEV---PSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGW 669
K R PA E P++ + +QP + P+ GS G P P
Sbjct: 794 KGGWEDCKRSPAWNETGRQPNSWNKQHQQQQPPQQPPPPQ-----PEASGSWGGPPPP-- 846
Query: 670 AGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPGP 705
P + SSW + P A + +E + P P
Sbjct: 847 --PPGNVRPSNSSWSSGPQPATPKDEEPSGWEEPSP 880
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 52.0 bits (123), Expect = 2e-06
Identities = 55/163 (33%), Positives = 68/163 (41%), Gaps = 46/163 (28%)
Query: 95 WNSPHSSGAMPGSSL--GSP-----PTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPAS 147
W + +S + PG+ L G+P P PG FP+ T+PP P+ P P S
Sbjct: 797 WTAFSTSSSSPGTPLSPGNPFSPGTPISPGPIFPI---------TSPPCHPS---PSPFS 844
Query: 148 LIPSHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLL 207
I S SS P PH PT+ PF + E PV + C S LP+TS
Sbjct: 845 PISSQVSS---NPSPH--PTSSPLPFSSSTPEFPVPLS-------QCPWSSLPTTS---- 888
Query: 208 KMPPPFS-GCSHPCSGHCGGHCSGPLLPP-PSSQPLPSTHRDP 248
PP FS CS S P PP PS+ PST P
Sbjct: 889 --PPTFSPTCSQVT-------LSSPFFPPCPSTSSFPSTTAAP 922
Score = 37.7 bits (86), Expect = 0.042
Identities = 50/194 (25%), Positives = 68/194 (35%), Gaps = 24/194 (12%)
Query: 50 SCGDDSHSSSSSSSSSSSSSSSSCPGNSGDWD------PSSF---LSAHKLSGLWNSPHS 100
S H +SS SSS+ P + W P +F S LS + P
Sbjct: 851 SSNPSPHPTSSPLPFSSSTPEFPVPLSQCPWSSLPTTSPPTFSPTCSQVTLSSPFFPPCP 910
Query: 101 SGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTAP-PNSPTGHHPQPASLIPSHP------ 153
S + S+ +P AF ++ L +P P + P P S +PS P
Sbjct: 911 STSSFPSTTAAPLLSLASAFSLAVMTVAQSLLSPSPGLLSQSPPAPPSPLPSLPLPPPVA 970
Query: 154 SSFGSPPHPHLLPTT------PAAPFPAQASECPVAAATAPHTPGPCQ--SSHLPSTSMP 205
P PH PA P P +A P++ P G Q SS P+ +P
Sbjct: 971 PGGQESPSPHTAEVESEASPPPARPLPGEARLAPISEEGKPQLVGRFQVTSSKEPAEPLP 1030
Query: 206 LLKMPPPFSGCSHP 219
L P SG P
Sbjct: 1031 LQPTSPTLSGSPKP 1044
Score = 36.6 bits (83), Expect = 0.093
Identities = 78/295 (26%), Positives = 105/295 (35%), Gaps = 43/295 (14%)
Query: 410 VSGSREPRPARERLLEWPDRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGF 469
+S EP P + PD + + S S E ++ S +S LS N F
Sbjct: 762 LSPQEEPAPLPALPVPLPDPSNEELQSSTSL---EHRSWTAFSTSSSSPGTPLS-PGNPF 817
Query: 470 SKEGAAEPEPQ---SLPPSNLSGS--SEQQPDINLDLSPLTLGSPQNHTLQAPGEPAP-- 522
S P P + PP + S S S ++ + SP SP + P P P
Sbjct: 818 SPGTPISPGPIFPITSPPCHPSPSPFSPISSQVSSNPSPHPTSSPLPFSSSTPEFPVPLS 877
Query: 523 --PWAEMRGPHPPW-------TEVRGP--PPGIVPENGLVRRLNTVPNLS-------RVI 564
PW+ + PP + P PP P P LS V+
Sbjct: 878 QCPWSSLPTTSPPTFSPTCSQVTLSSPFFPP--CPSTSSFPSTTAAPLLSLASAFSLAVM 935
Query: 565 WVK----TPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAP 620
V +P PG S+ P + P LP PV+ GG Q+ + +SEASP P
Sbjct: 936 TVAQSLLSPSPGL-LSQSPPAPPSPLPSLPLPPPVAPGG--QESPSPHTAEVESEASPPP 992
Query: 621 RPPASLEVPSAKGQVAG-PKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPK 674
P E A G P+ GR +V S E E P +GSPK
Sbjct: 993 ARPLPGEARLAPISEEGKPQLVGRF----QVTSSKEPAEPLPLQPTSPTLSGSPK 1043
Score = 32.7 bits (73), Expect = 1.3
Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 24/165 (14%)
Query: 592 PEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAK---GQVAGPKQPGRVLELP 648
P P+ + G+P+ G +A++ PRP +S + G ++ P P
Sbjct: 25 PPPLGTAGQPRLGPPP-RRARRFSGKAEPRPRSSRLSRRSSVDLGLLSSWSLPASPAPDP 83
Query: 649 KVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWP----GEAKARPQEQESVQPPG 704
+ + PGP + P +++ +W E ARP+ +S PG
Sbjct: 84 P--------DPPDSAGPGPARSPPPSSKEPPEGTWTEGAPVKAAEDSARPELPDSAVGPG 135
Query: 705 PARPQSLPQGKGRSRRSRNKQEKP-------ASSLDDVFLPKDMD 742
P +P+ RR R ++EK A+S D +L D++
Sbjct: 136 SREPLRVPEAVALERR-REQEEKEDMETQAVATSPDGRYLKFDIE 179
Score = 31.6 bits (70), Expect = 3.0
Identities = 36/140 (25%), Positives = 47/140 (33%), Gaps = 32/140 (22%)
Query: 574 PSSEEPSSKEVPSCKQELP-----EPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEV 628
P + E S+ P + LP P+S GKPQ R + K A P P P S
Sbjct: 979 PHTAEVESEASPPPARPLPGEARLAPISEEGKPQLVGRFQVTSSKEPAEPLPLQPTS--- 1035
Query: 629 PSAKGQV-------------------AGPKQPGRVLELPKVGSCAEAG---EGSRGSRPG 666
P+ G GP+ + E + AG EG G P
Sbjct: 1036 PTLSGSPKPSTPQLTSESSDTEDSAGGGPETREALAESDRAAEGLGAGVEEEGDDGKEPQ 1095
Query: 667 PGWAGSPKTEKEKGSSWRNW 686
G GSP+ W N+
Sbjct: 1096 VG--GSPQPLSHPSPVWMNY 1113
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 52.0 bits (123), Expect = 2e-06
Identities = 79/348 (22%), Positives = 132/348 (37%), Gaps = 55/348 (15%)
Query: 369 NSTEPKVPN-SARAAKRARHKLKKKEKEKAQLAAEALKQANR-------VSGSREPRPAR 420
NS E P SA A ++ + +E+ + A + L + R + GS+ +
Sbjct: 591 NSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCK 650
Query: 421 ERLLEWPDRE-LDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGAAEP-- 477
+ R+ LD + ++++ +N + +A + S+E A P
Sbjct: 651 NFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAA----------SEEAAFPPVV 700
Query: 478 EPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWT-E 536
E + + S +SG+ E+ + + S ++ +P A GP PP T
Sbjct: 701 EDEEMEASGVSGNEEEMVE---EAEATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLG 757
Query: 537 VRGPPPG--IVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEP 594
GPPPG P + P S TP P PS P VP K+E E
Sbjct: 758 ADGPPPGPPTPPPEDIPAPTEPTP-ASEATGAPTPPPAPPSPSAPPPV-VP--KEEKEEE 813
Query: 595 VSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLEL---PKVG 651
++ ++G+ Q +PPA+ E+ G+ P + E P G
Sbjct: 814 TAAAPPVEEGEEQ-------------KPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKG 860
Query: 652 SCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQES 699
AEA E + G+ K EK++G S R ++ PQ+ +S
Sbjct: 861 KDAEAAEATA--------EGALKAEKKEGGSGRATTAKSSGAPQDSDS 900
Score = 35.8 bits (81), Expect = 0.16
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 47/291 (16%)
Query: 16 VCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSC-GDDSHSSSSSSSSSSSSSSSSCP 74
V C + EE + G++ A + + + K++ G ++++ SS + S SS
Sbjct: 845 VKSECTEEAEEGPAK-GKDAEAAEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSAT 903
Query: 75 GNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPT--IPGEAFPVSEHHQHSDLT 132
++ + D + ++L SP S P G P P + + + Q +
Sbjct: 904 CSADEVDEAEGGDKNRLL----SPRPSLLTP---TGDPRANASPQKPLDLKQLKQRAAAI 956
Query: 133 APPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLP----------------TTPAAPFPAQ 176
P H P P+ P+ PP +L P +PA P +
Sbjct: 957 PPIQVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKE 1016
Query: 177 ASE---CPVAAATAPHTPG--PCQSSHLPSTSMP--LLKMPPPF---SGCSHPCSGH--- 223
A + P AA A PG PC +S LP P ++K P S S+ GH
Sbjct: 1017 AEKPVFFPAFAAEAQKLPGDPPCWTSGLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLP 1076
Query: 224 CGGH-CSGPLLPPP----SSQPLPSTHRDPGCKGHKFA--HSGLACQLPQP 267
G H + P+LP P + PL S+ + P + G++ QL P
Sbjct: 1077 LGLHDTARPVLPRPPTISNPPPLISSAKHPSVLERQIGAISQGMSVQLHVP 1127
Score = 33.5 bits (75), Expect = 0.79
Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 17/111 (15%)
Query: 112 PPTIPGEAFPVS-------EHHQHSDLTAPPNSPTGHHPQPASLI--------PSHPSSF 156
PP + E S E + ++ T +S T P P + P P++
Sbjct: 697 PPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATL 756
Query: 157 GSPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLL 207
G+ P PT P PA P + AT TP P S PS P++
Sbjct: 757 GADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPS--PSAPPPVV 805
Score = 30.0 bits (66), Expect = 8.7
Identities = 35/168 (20%), Positives = 59/168 (35%), Gaps = 28/168 (16%)
Query: 16 VCQSCRKSMEEDERQTGREHAVAISLSHTSCKSQSCGDDSHSSSSSSSSSSS--SSSSSC 73
+ Q + ME++ ++ + S + D+ +S S + + +
Sbjct: 665 ILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEAT 724
Query: 74 PGNSGDWD--PSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDL 131
NS D + PS A K +G +G P ++LG+ PG
Sbjct: 725 VNNSSDTESIPSPHTEAAKDTG------QNGPKPPATLGADGPPPG-------------- 764
Query: 132 TAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQASE 179
PP P P P P+ ++ P P P +P+AP P E
Sbjct: 765 --PPTPPPEDIPAPTEPTPASEATGAPTPPP--APPSPSAPPPVVPKE 808
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 52.0 bits (123), Expect = 2e-06
Identities = 87/392 (22%), Positives = 143/392 (36%), Gaps = 61/392 (15%)
Query: 372 EPKVPNSARAAKRARHKLKKKEKEKAQLAAEALKQANRVSGSREPRPARERLLEWPDREL 431
E K P A++ ++A+ +K++ K A+ + ++A + + P A+ E E
Sbjct: 591 EAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKE----EA 646
Query: 432 DRVNSFLSSRLQEIKNT--VKDSIRASFSVCELSMDSNGFSKEGAAEPEPQSLPPSNLSG 489
S +E K+ K ++A E + K A PE P +
Sbjct: 647 KSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSP---VKAEAKSPEKAKSPVKEEAK 703
Query: 490 SSEQ--QPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPPPGIVPE 547
S E+ P SP SP + P + P E E + P PE
Sbjct: 704 SPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKE---------EAKSPEKAKSPE 754
Query: 548 NGLVRRLNTVPNLSRVIWVKTPKPGYPSSEE---PSSKEVPSCKQELPEPVSSGGKPQKG 604
++ + VK+P+ P+ EE P+ K K + E V S P+K
Sbjct: 755 K------------AKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKS---PEKA 799
Query: 605 KRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSR 664
K S K+ +P P EV S + P++ +V E PK +A
Sbjct: 800 K---SPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEV-KVKEPPKKAEEEKA-------- 847
Query: 665 PGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPGPARPQSLPQGKGRSRRSRNK 724
+PKTE++K S P + +P+ +E +P +S + K + K
Sbjct: 848 -----PATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKK 902
Query: 725 -----QEKPAS-SLDDVFLPKDMDGVEMDETD 750
+E PA + + PK+ V E D
Sbjct: 903 VPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPD 934
Score = 40.8 bits (94), Expect = 0.005
Identities = 86/388 (22%), Positives = 140/388 (36%), Gaps = 70/388 (18%)
Query: 372 EPKVPNSARAAKRARHKLKKKEKEKAQLAAEALKQANRVSGSREPRPARERLLEWPDREL 431
E K P A++ +A + K EK K+ + AEA S +E + E+ P +E
Sbjct: 659 EAKSPEKAKSPVKA--EAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKS-PVKEE 715
Query: 432 DRVNSFLSSRLQE-----------IKNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQ 480
+ S ++E +K K +A ++D + A+ E +
Sbjct: 716 AKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEAR 775
Query: 481 SLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGP-----HPPWT 535
S P++ + P SP SP +AP + P E++ P P
Sbjct: 776 S--PADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEV 833
Query: 536 EVRGPPPGIVPENGLVRRLNTVPNLSRVIWV---KTPKPGYPSSEEPS------------ 580
+V+ PP E S+ + PKP +EP+
Sbjct: 834 KVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAK 893
Query: 581 ------SKEVPSCKQELPE--PVSSGGKPQK----GKRQGSQAKKSEAS-PAPRPPASLE 627
K+VP+ ++E P V KP++ K++ AK E S PA + A+ E
Sbjct: 894 KEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPE 953
Query: 628 VPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWP 687
K + A K+P E PK + A+ + + P PK EK + SS
Sbjct: 954 KKDTKEEKA--KKPE---EKPKTEAKAKEDDKTLSKEP-----SKPKAEKAEKSS----- 998
Query: 688 GEAKARPQEQESVQPPGPARPQSLPQGK 715
+Q+ +PP A +GK
Sbjct: 999 ------STDQKDSKPPEKATEDKAAKGK 1020
Score = 38.9 bits (89), Expect = 0.019
Identities = 45/202 (22%), Positives = 83/202 (41%), Gaps = 13/202 (6%)
Query: 539 GPPPGIVPENGLVRRLNTVPNLSRVIWVKTP---KPGYPSSEEPSSKEVPSCKQELPEPV 595
GP P +PE L +P++S I VK+ K S +E E + + ++ E V
Sbjct: 416 GPIPFSLPEG-----LPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEV 470
Query: 596 SSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAE 655
+ + + + +G + + E A + P A+ + A P++ + + S AE
Sbjct: 471 TEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAE-EAASPEKEAKSPVKEEAKSPAE 529
Query: 656 AGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQP---PGPARPQSLP 712
A + P SP+ K P EAK+ P+++E+ P P + +S
Sbjct: 530 AKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKS-PEKEEAKSPAEVKSPEKAKSPA 588
Query: 713 QGKGRSRRSRNKQEKPASSLDD 734
+ + +S EK S + +
Sbjct: 589 KEEAKSPAEAKSPEKAKSPVKE 610
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 51.6 bits (122), Expect = 3e-06
Identities = 64/241 (26%), Positives = 83/241 (34%), Gaps = 86/241 (35%)
Query: 487 LSGSSEQQPDINLDLSP-LTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPPP--G 543
LS + D++ + SP L G+PQ + Q +P +GP PP + +GPPP G
Sbjct: 13 LSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKP-------QGPPPPPGKPQGPPPQGG 65
Query: 544 IVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPS-----SKEVPSCKQELPEPVSSG 598
P+ P PG P P S P K + P P G
Sbjct: 66 NKPQG-------------------PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPP--QG 104
Query: 599 GKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGE 658
GKPQ QG +S SP +P GP Q E
Sbjct: 105 GKPQGPPAQGGSKSQSARSPPGKP-------------QGPPQQ----------------E 135
Query: 659 GSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPGPARPQSLPQGKGRS 718
G+ P P G+P+ +PQ + QP GP RP PQG S
Sbjct: 136 GNNPQGPPPPAGGNPQ------------------QPQAPPAGQPQGPPRP---PQGGRPS 174
Query: 719 R 719
R
Sbjct: 175 R 175
Score = 35.4 bits (80), Expect = 0.21
Identities = 40/148 (27%), Positives = 48/148 (32%), Gaps = 13/148 (8%)
Query: 97 SPHSSGAMPGSSLGSPPTIPGEAF-PVSEHHQHSDLTAPPNSPTGHHPQ-PASLIPSHPS 154
+P G+ PP PG+ P + PP P G PQ S P P
Sbjct: 35 NPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPP 94
Query: 155 SFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPG--PCQSSHLPSTSMPLLKMPPP 212
G P P P P PAQ +A + P P P Q + P PPP
Sbjct: 95 --GKPQGPPPQGGKPQGP-PAQGGSKSQSARSPPGKPQGPPQQEGNNPQGP------PPP 145
Query: 213 FSGCSHPCSGHCGGHCSGPLLPPPSSQP 240
G G GP PP +P
Sbjct: 146 AGGNPQQPQAPPAGQPQGPPRPPQGGRP 173
Score = 33.5 bits (75), Expect = 0.79
Identities = 39/146 (26%), Positives = 52/146 (35%), Gaps = 34/146 (23%)
Query: 586 SCKQELPEPVSSGGKPQ--KGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGR 643
S Q L E VS P G QG + P PP G+ GP G
Sbjct: 14 SSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPP--------GKPQGPPPQG- 64
Query: 644 VLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPP 703
G +G P PG P + +K S R+ PG+ + PP
Sbjct: 65 -------------GNKPQGPPP-PGKPQGPPPQGDKSRSPRSPPGKPQG--------PPP 102
Query: 704 GPARPQSLP-QGKGRSRRSRNKQEKP 728
+PQ P QG +S+ +R+ KP
Sbjct: 103 QGGKPQGPPAQGGSKSQSARSPPGKP 128
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 51.6 bits (122), Expect = 3e-06
Identities = 71/276 (25%), Positives = 101/276 (36%), Gaps = 52/276 (18%)
Query: 487 LSGSSEQQPDINLDLSPLTL-----------GSPQNHTLQAPGEPA--PPWA--EMRGPH 531
LS + D++ + SP + G+ T PG+P PP + +GP
Sbjct: 13 LSSAQSLNEDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPP 72
Query: 532 PPWTEVRGPPP-------GIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEP---SS 581
P + GPPP G P G + P P+PG P P +
Sbjct: 73 PRPGKPEGPPPQGGNQSQGPPPRPG--KPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQ 130
Query: 582 KEVPSCKQELPE-PVSSGGK------PQKGKRQGSQAKKSEASPAPRP-PASLEVPSAKG 633
+ P + PE P GG P+ GK +G + S P P P E P +G
Sbjct: 131 SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQG 190
Query: 634 --QVAGPK-QPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEA 690
Q GP +PG+ P G G S+G P PG P+ +G + P
Sbjct: 191 GNQSQGPPPRPGKPEGPPPQG-----GNQSQGPPPRPG---KPEGPPSQGGNKPQGPPPH 242
Query: 691 KARPQ------EQESVQPPGPARPQSLPQGKGRSRR 720
+PQ + +PP P RPQ P G ++
Sbjct: 243 PGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQ 278
Score = 33.1 bits (74), Expect = 1.0
Identities = 40/169 (23%), Positives = 55/169 (32%), Gaps = 34/169 (20%)
Query: 478 EPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQN-----HTLQAPGEPAPPWAEMRGPHP 532
+P+ PP + S P P G Q+ H + G P + +GP P
Sbjct: 140 KPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPP 199
Query: 533 PWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELP 592
+ GPP P+ G N S+ P+PG P P
Sbjct: 200 RPGKPEGPP----PQGG---------NQSQ---GPPPRPGKPEGPPSQGGNKP------- 236
Query: 593 EPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGPKQP 641
G P GK QG ++ P PP + P G P+QP
Sbjct: 237 ----QGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPG--GNPQQP 279
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 51.2 bits (121), Expect = 4e-06
Identities = 58/191 (30%), Positives = 73/191 (38%), Gaps = 25/191 (13%)
Query: 60 SSSSSSSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLGSPPTIPGEA 119
S S S S P S + P L LS SP P +L +P + P EA
Sbjct: 492 SPLSPPPEESPLSPPPESSPFSP---LEESPLSPPEESP------PSPALETPLSPPPEA 542
Query: 120 FPVSEHHQHSDLTAPPNS-PTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAAPFPAQAS 178
P+S + S L+ PP PT P+ + L P S SPP P P +P P +AS
Sbjct: 543 SPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPP-PEESPMSP----PPEAS 597
Query: 179 ECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPCSGHCGGHCSGPLLPPPS- 237
+P +P P +S P L PP S S P P+ PPP
Sbjct: 598 RLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPE-------ESPMSPPPEV 650
Query: 238 --SQPLPSTHR 246
PLP R
Sbjct: 651 SRLSPLPVVSR 661
Score = 42.4 bits (98), Expect = 0.002
Identities = 65/262 (24%), Positives = 88/262 (33%), Gaps = 36/262 (13%)
Query: 471 KEGAAEPEPQSLPPSNLSGS-------SEQQPDINLDLSPLTLGSP-----QNHTLQAPG 518
+E P P+S P S L S S P + LSP SP + L P
Sbjct: 499 EESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPP 558
Query: 519 EPAP----PWAEMRGPHPPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYP 574
E P P A P PP PPP P ++ P SR+ P P
Sbjct: 559 EELPTSPPPEASRLSP-PPEESPMSPPPEESP-------MSPPPEASRLFPPFEESPLSP 610
Query: 575 SSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQ 634
EE P + P P S P ++S SP P +P +
Sbjct: 611 PPEESPLSPPPEASRLSPPPEDSPMSP--------PPEESPMSPPPEVSRLSPLP-VVSR 661
Query: 635 VAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARP 694
++ P + + P+ + E SR S P SP E S P ++
Sbjct: 662 LSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASP---PPEDSLMSL 718
Query: 695 QEQESVQPPGPARPQSLPQGKG 716
+ES P P PQ P+ +G
Sbjct: 719 PLEESPLLPLPEEPQLCPRSEG 740
Score = 39.7 bits (91), Expect = 0.011
Identities = 41/150 (27%), Positives = 51/150 (34%), Gaps = 44/150 (29%)
Query: 116 PGEAFPVSEHHQHSDLTAPPNS-------------PTGHHPQPASLIPSHPSSFGSP--- 159
P E P+S + S L+ PP S P P PA P P SP
Sbjct: 488 PLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSP 547
Query: 160 --------PHPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPP 211
P P LPT+P P +AS +P +P P +S P ++ P
Sbjct: 548 PFEESPLSPPPEELPTSP----PPEASRLSPPPEESPMSPPPEESPMSPPPEAS--RLFP 601
Query: 212 PFSGCSHPCSGHCGGHCSGPLLPPPSSQPL 241
PF PL PPP PL
Sbjct: 602 PFE--------------ESPLSPPPEESPL 617
Score = 39.3 bits (90), Expect = 0.014
Identities = 60/221 (27%), Positives = 73/221 (33%), Gaps = 61/221 (27%)
Query: 101 SGAMPGSS------LGSPPTIPGE-----------AFPVSEHHQHSDLTAPPN-SPTGHH 142
+G++PG L PP +P + A+P+ + T PP SPTG
Sbjct: 2147 AGSVPGPDSPGELFLKLPPQVPAQVPSQDPFGLAPAYPLEPRFPTAPPTYPPYPSPTGAP 2206
Query: 143 PQPASLIPSHPSSFGSPPHPHLLPT-----TPAAPFPAQASECP-VAAATAPHTPGPCQS 196
QP L S G P H P P+ P P CP + P +PG
Sbjct: 2207 AQPPMLGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFLKPRCPSLDNLAVPESPGVGGG 2266
Query: 197 SHLPSTSMPLLKMPPPFS-------------GCSHPCSG----------HCGGHCSGPLL 233
S PLL PPPF G S P G G H G L
Sbjct: 2267 ----KASEPLLS-PPPFGESRKALEVKKEELGASSPSYGPPNLGFVDSPSSGTHLGGLEL 2321
Query: 234 PPPSSQPLPSTHR----DPGCKGHKFAHSGLACQLPQPCEA 270
P P T R +P G GL Q P P +A
Sbjct: 2322 KTPDVFKAPLTPRASQVEPQSPG-----LGLRPQEPPPAQA 2357
Score = 38.1 bits (87), Expect = 0.032
Identities = 71/290 (24%), Positives = 101/290 (34%), Gaps = 38/290 (13%)
Query: 447 NTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQSLPPSNLSGSSEQ-QPDINLDLS--- 502
+T D A + C+ + EP P L + Q +P + L+
Sbjct: 379 DTPTDEPDALYVACQGQPKGGHVTSMQPKEPGPLQCEAKPLGKAGVQLEPQLEAPLNEEM 438
Query: 503 PLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPPPGIVPENGLVRRLNTVPNLSR 562
PL L P+ L P E +P PP PPP +P + L L +LSR
Sbjct: 439 PL-LPPPEESPLSPPPEESPT------SPPPEASRLSPPPEELPASPLPEAL----HLSR 487
Query: 563 VIWVKTPKPGYPSSEEPSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRP 622
+ P P E P S P P SS P + + + E+ P+P
Sbjct: 488 PLEESPLSP--PPEESPLS----------PPPESSPFSPLE---ESPLSPPEESPPSPAL 532
Query: 623 PASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSS 682
L P ++ P + + P+ + E SR S P SP E+ S
Sbjct: 533 ETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSP 592
Query: 683 WRNWPGEAKA--RPQEQESVQPPGPARPQSLPQGKGRSRRSRNKQEKPAS 730
P EA P E+ + PP P S P SR S ++ P S
Sbjct: 593 ----PPEASRLFPPFEESPLSPPPEESPLSPP--PEASRLSPPPEDSPMS 636
Score = 37.7 bits (86), Expect = 0.042
Identities = 50/169 (29%), Positives = 56/169 (33%), Gaps = 21/169 (12%)
Query: 98 PHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTAPPNS----------PTGHHPQPAS 147
P S A+P SL S P A P S+ S LT P S P P P S
Sbjct: 2392 PESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYS 2451
Query: 148 LIPSHPSSFG--SPPHPHLLPTTPAAPFPAQA---SECPVAAATAPHTPGPCQSSH--LP 200
PS P S +P H P P F A + + A GP H +P
Sbjct: 2452 RPPSRPQSRDPFAPLHKPPRPQPPEVAFKAGSLAHTSLGAGGFPAALPAGPAGELHAKVP 2511
Query: 201 STSMPLLKMPP---PFSGCSHPCSGHCGGHCSGPLLPPPSSQP-LPSTH 245
S P P F G P P L PP QP LP H
Sbjct: 2512 SGQPPNFVRSPGTGAFVGTPSPMRFTFPQAVGEPSLKPPVPQPGLPPPH 2560
Score = 37.0 bits (84), Expect = 0.071
Identities = 63/261 (24%), Positives = 87/261 (33%), Gaps = 42/261 (16%)
Query: 5 VKNLLGEMPL--WVCQSCRKSME----EDERQTGREHAVAISLSHTSCKSQSCGDDSHSS 58
+K + E+P W C++CR E E SL H K+Q G S
Sbjct: 303 LKPPMEELPAHSWKCKACRVCRACGAGSAELNPNSEWFENYSLCHRCHKAQG-GQTIRSV 361
Query: 59 SSSSSSSSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMP------------- 105
+ + S S PG++ +P + A G H + P
Sbjct: 362 AEQHTPVCSRFSPPEPGDTPTDEPDALYVA--CQGQPKGGHVTSMQPKEPGPLQCEAKPL 419
Query: 106 ---GSSLGSPPTIP-GEAFPVSEHHQHSDLTAPP-NSPTGHHPQPASLIPSHPSSFGSPP 160
G L P E P+ + S L+ PP SPT P+ + L P P + P
Sbjct: 420 GKAGVQLEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPP-PEELPASP 478
Query: 161 HPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSGCSHPC 220
P L + P + S +P +P P S P PL PP P
Sbjct: 479 LPEALHLSR----PLEESPLSPPPEESPLSPPPESSPFSPLEESPL---SPPEESPPSPA 531
Query: 221 SGHCGGHCSGPLLPPPSSQPL 241
PL PPP + PL
Sbjct: 532 -------LETPLSPPPEASPL 545
Score = 37.0 bits (84), Expect = 0.071
Identities = 41/149 (27%), Positives = 54/149 (36%), Gaps = 23/149 (15%)
Query: 111 SPPTIPGEAFPVSEHHQHSDLTAPP-NSPTGHHPQPASLIPSHPSSFGSP--------PH 161
SP + P EA +S + S ++ PP SP P+ + L P S SP P
Sbjct: 615 SPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPP 674
Query: 162 PHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQS----------SHLPSTSMPLLKMPP 211
P PT+P P +AS +P +P P S LP PLL +P
Sbjct: 675 PEESPTSP----PPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLPE 730
Query: 212 PFSGCSHPCSGHCGGHCSGPLLPPPSSQP 240
C H P L P +P
Sbjct: 731 EPQLCPRSEGPHLSPRPEEPHLSPRPEEP 759
Score = 35.4 bits (80), Expect = 0.21
Identities = 53/202 (26%), Positives = 68/202 (33%), Gaps = 46/202 (22%)
Query: 91 LSGLWNSPHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIP 150
LS L + GA S SP P P+S P + T P P ++P
Sbjct: 951 LSPLGELEYPFGAKGDSDPESPLAAPILETPISP--------PPEANCTDPEPVPPMILP 1002
Query: 151 SHPSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHT-PGPCQSSHLPSTSMPLLKM 209
P S P P L+ P P Q S + ++ P C LP L +
Sbjct: 1003 PSPGSPVGPASPILM-----EPLPPQCSPLLQHSLVPQNSPPSQCSPPALP------LSV 1051
Query: 210 PPPFS------GCS-----HPCSGHCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHS 258
P P S G S H P L P ++ PLPS D
Sbjct: 1052 PSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPSATSPLPSPMGD----------- 1100
Query: 259 GLACQLPQPCEADE---GLGEE 277
L+C P P A + GLGE+
Sbjct: 1101 -LSCPAPSPAPALDDFSGLGED 1121
Score = 33.1 bits (74), Expect = 1.0
Identities = 55/211 (26%), Positives = 76/211 (36%), Gaps = 23/211 (10%)
Query: 514 LQAPGEPAPPWAEMRGPHPPWTEVRGPPPG--IVPENGLVRRLNTVPNLSRVIWVKTPKP 571
L+ P P PP A P P + P PG + P + ++ P S ++
Sbjct: 978 LETPISP-PPEANCTDPEPVPPMILPPSPGSPVGPASPILME-PLPPQCSPLLQHSL--- 1032
Query: 572 GYPSSEEPSSKEVPSCKQELPEPVSSGGK-----PQKGKRQGSQAKKSEAS-PAPRPPAS 625
P + PS P+ +P P+S GK + + K SE PA P A+
Sbjct: 1033 -VPQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPSAT 1091
Query: 626 LEVPSAKGQVAGPKQPGRVLELPKVGSCAE-----AGEGSRGSRPGPGWAGSPKTEKEKG 680
+PS G ++ P P L E G + GS+P PG + KG
Sbjct: 1092 SPLPSPMGDLSCP-APSPAPALDDFSGLGEDTAPLDGIDAPGSQPEPGQTPGSLASELKG 1150
Query: 681 SSWRNWPGE-AKARPQE--QESVQPPGPARP 708
S P E A P E E Q G P
Sbjct: 1151 SPVLLDPEELAPVTPMEVYPECKQTAGQGSP 1181
Score = 33.1 bits (74), Expect = 1.0
Identities = 64/303 (21%), Positives = 101/303 (33%), Gaps = 81/303 (26%)
Query: 462 LSMDSNGFSKEGAAEPEPQSL---PPSNLSGSSEQQPDI----------NLDLSPLTLGS 508
LS DS + +P+P SL PP L G +QQ + L + S
Sbjct: 4069 LSGDSQLLLVQPQPQPQPSSLQLQPPLRLPGQQQQQVSLLHTAGGGSHGQLGSGSSSEAS 4128
Query: 509 PQNHTLQAPG-----EPAPPWAEMRGPHPPWTE--------VRGPPPGIVPENGL-VRRL 554
H L P +P + GP P E + P PG V ++G + +
Sbjct: 4129 SVPHLLAQPSVSLGDQPGSMTQNLLGPQQPMLERPMQNNTGPQPPKPGPVLQSGQGLPGV 4188
Query: 555 NTVPNLSRV------IWVKTPKPGYPSSEEPSSKEVPSCKQELPE--------------- 593
+P + ++ + K P+ + S ++ + +++L +
Sbjct: 4189 GIMPTVGQLRAQLQGVLAKNPQLRHLSPQQQQQLQALLMQRQLQQSQAVRQTPPYQEPGT 4248
Query: 594 ---PVSS--GGKPQKGKRQGSQA---KKSEASPAPRPPASLEVPS---AKGQVAGPKQPG 642
P+ G +PQ G G Q ++ A P P+ P L P + G V GP P
Sbjct: 4249 QTSPLQGLLGCQPQLGGFPGPQTGPLQELGAGPRPQGPPRLPAPPGALSTGPVLGPVHP- 4307
Query: 643 RVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQP 702
P P PK + S P EA+ P + +P
Sbjct: 4308 ---------------------TPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKP 4346
Query: 703 PGP 705
GP
Sbjct: 4347 QGP 4349
Score = 32.3 bits (72), Expect = 1.8
Identities = 53/217 (24%), Positives = 75/217 (34%), Gaps = 33/217 (15%)
Query: 476 EPEPQSLPPSNLSGSSEQQPDINLDLSPLTLGSPQNHTLQAPGEPAPPWAEMRGPHPPWT 535
EP Q+ P L G QP + PQ LQ G P R P PP
Sbjct: 4245 EPGTQTSPLQGLLGC---QPQLG------GFPGPQTGPLQELGAGPRPQGPPRLPAPPGA 4295
Query: 536 EVRGP--------PPGIVPENGLVRRLNTVPNLSRVIWVK---------TPKPGYPSSEE 578
GP PP P+ +R + +P+ S + + TPKP P+ E
Sbjct: 4296 LSTGPVLGPVHPTPPPSSPQEP--KRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLEP 4353
Query: 579 PSSKEVPSCKQELPEPVSSGGKPQKGKRQGSQAKKSEASPAPRPPASLEVPSAKGQVAGP 638
P + P+ Q S G P ++ +K E S P L+ GQV
Sbjct: 4354 PPGRVSPAAAQLADTLFSKGLGPWDPPDNLAETQKPEQSSL--VPGHLD--QVNGQVVPE 4409
Query: 639 KQPGRVLELPKVGSCAEAGEGSRGSRPGPGWAGSPKT 675
+ + P+ CA + + G G+P T
Sbjct: 4410 ASQLSIKQEPREEPCALGAQSVKREANGEP-IGAPGT 4445
Score = 31.2 bits (69), Expect = 3.9
Identities = 29/104 (27%), Positives = 37/104 (35%), Gaps = 20/104 (19%)
Query: 112 PPTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSPPHPHLLPTTPAA 171
PPT + VS L+APP P PS PP P L +PA+
Sbjct: 4888 PPTQHSYTYNVSNLDVRQ-LSAPP--------------PEEPSP---PPSP--LAPSPAS 4927
Query: 172 PFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPPFSG 215
P E P P P P + P ++ P + PP G
Sbjct: 4928 PPTEPLVELPTEPLAEPPVPSPLPLASSPESARPKPRARPPEEG 4971
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,428,004
Number of Sequences: 37866
Number of extensions: 2969692
Number of successful extensions: 29136
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 1713
Number of HSP's that attempted gapping in prelim test: 17063
Number of HSP's gapped (non-prelim): 9687
length of query: 789
length of database: 18,247,518
effective HSP length: 110
effective length of query: 679
effective length of database: 14,082,258
effective search space: 9561853182
effective search space used: 9561853182
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.