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Search of human proteins with 154240677
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154240677 hypothetical protein LOC399949 isoform 2 [Homo
sapiens]
(169 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154240677 hypothetical protein LOC399949 isoform 2 [Homo sapi... 330 3e-91
gi|154240722 hypothetical protein LOC399949 isoform 1 [Homo sapi... 316 7e-87
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 42 3e-04
gi|56550065 complexin 2 [Homo sapiens] 39 0.002
gi|5729783 complexin 2 [Homo sapiens] 39 0.002
gi|171543895 ataxin 2 [Homo sapiens] 39 0.002
gi|104526627 triadin [Homo sapiens] 38 0.004
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 38 0.005
gi|32698688 citron [Homo sapiens] 37 0.006
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 37 0.006
gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo sa... 36 0.018
gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo sa... 36 0.018
gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo sa... 36 0.018
gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo sap... 36 0.018
gi|148746195 trichohyalin [Homo sapiens] 36 0.018
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 35 0.024
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 35 0.024
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa... 35 0.040
gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo sa... 35 0.040
gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo sa... 35 0.040
gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo sa... 35 0.040
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ... 35 0.040
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens] 35 0.040
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 34 0.052
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 34 0.052
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 34 0.052
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 34 0.052
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 34 0.052
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 34 0.052
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 34 0.052
>gi|154240677 hypothetical protein LOC399949 isoform 2 [Homo
sapiens]
Length = 169
Score = 330 bits (847), Expect = 3e-91
Identities = 169/169 (100%), Positives = 169/169 (100%)
Query: 1 METGPSEEPSGRKESQEMCPPGLLVFAGSSEQDANLAKQFWISASMYPPSESQLVLRRDS 60
METGPSEEPSGRKESQEMCPPGLLVFAGSSEQDANLAKQFWISASMYPPSESQLVLRRDS
Sbjct: 1 METGPSEEPSGRKESQEMCPPGLLVFAGSSEQDANLAKQFWISASMYPPSESQLVLRRDS 60
Query: 61 SQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTREEI 120
SQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTREEI
Sbjct: 61 SQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTREEI 120
Query: 121 LQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQEEVKTLD 169
LQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQEEVKTLD
Sbjct: 121 LQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQEEVKTLD 169
>gi|154240722 hypothetical protein LOC399949 isoform 1 [Homo
sapiens]
Length = 196
Score = 316 bits (809), Expect = 7e-87
Identities = 169/196 (86%), Positives = 169/196 (86%), Gaps = 27/196 (13%)
Query: 1 METGPSEEPSGRKESQEMCPPGLLVFAGSSEQDANLAKQFWISASMYPPSESQLVLRRDS 60
METGPSEEPSGRKESQEMCPPGLLVFAGSSEQDANLAKQFWISASMYPPSESQLVLRRDS
Sbjct: 1 METGPSEEPSGRKESQEMCPPGLLVFAGSSEQDANLAKQFWISASMYPPSESQLVLRRDS 60
Query: 61 SQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQK------- 113
SQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQK
Sbjct: 61 SQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKTRSHSVT 120
Query: 114 --------------------AKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKV 153
AKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKV
Sbjct: 121 QNEVQWHDHGSLQPQLSRIQAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKV 180
Query: 154 VSESDKEDQEEVKTLD 169
VSESDKEDQEEVKTLD
Sbjct: 181 VSESDKEDQEEVKTLD 196
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 42.0 bits (97), Expect = 3e-04
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 34 ANLAKQFW--ISASMYPPSESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKN 91
A+L KQF ++ S + E+Q V R + + + + + + G E + L + N
Sbjct: 841 ADLQKQFSEILARSKWERDEAQ-VRERKLQEEMALQQEKLATGQEEFRQACERALEARMN 899
Query: 92 RDIFAEALKIQESEEKVKYLQK-AKTREEI-----LQLLRKQRE-ERISKELISLPYKPK 144
D +IQ+ E ++ YLQ+ K+ EEI LQL E ERI +L L K K
Sbjct: 900 FDKRQHEARIQQMENEIHYLQENLKSMEEIQGLTDLQLQEADEEKERILAQLRELEKKKK 959
Query: 145 AKEHKAKKVVSESDKE 160
++ K+++ V DKE
Sbjct: 960 LEDAKSQEQVFGLDKE 975
>gi|56550065 complexin 2 [Homo sapiens]
Length = 134
Score = 39.3 bits (90), Expect = 0.002
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 88 SNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQLLR-----KQREERISKELISLPYK 142
+ K + EAL+ QE E K K+ + RE++ Q +R K++EE+ ++E +L
Sbjct: 30 AQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEEKAALEQP 89
Query: 143 PKAKEHKAKKVVSE--SDKEDQEEVKTLD 169
+ + KK + D+E++EE LD
Sbjct: 90 CEGSLTRPKKAIPAGCGDEEEEEEESILD 118
>gi|5729783 complexin 2 [Homo sapiens]
Length = 134
Score = 39.3 bits (90), Expect = 0.002
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 88 SNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQLLR-----KQREERISKELISLPYK 142
+ K + EAL+ QE E K K+ + RE++ Q +R K++EE+ ++E +L
Sbjct: 30 AQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEEKAALEQP 89
Query: 143 PKAKEHKAKKVVSE--SDKEDQEEVKTLD 169
+ + KK + D+E++EE LD
Sbjct: 90 CEGSLTRPKKAIPAGCGDEEEEEEESILD 118
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 38.9 bits (89), Expect = 0.002
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 48 PPSESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKN-RDIFAEALKIQESEE 106
P SE++ +D Q P + +E +S SF A NK + +E K + +
Sbjct: 742 PSSEAKDSRLQDQRQNSPAGNKENIKPNE---TSPSFSKAENKGISPVVSEHRKQIDDLK 798
Query: 107 KVKY---LQKAKTREEILQLLRKQREERISKELISLPYKPKAK----EHKAKKVVSESDK 159
K K LQ + T E + QLL K RE S++LI +P AK E+ + S S K
Sbjct: 799 KFKNDFRLQPSSTSESMDQLLNKNREGEKSRDLIKDKIEPSAKDSFIENSSSNCTSGSSK 858
Query: 160 EDQEEV 165
+ +
Sbjct: 859 PNSPSI 864
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 38.1 bits (87), Expect = 0.004
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 97 EALKIQESEEKVKYLQKAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSE 156
+A ++SEEK K K +E++ Q K KE+ P KPK KE K K VS+
Sbjct: 207 KAKTAEKSEEKTKKEVKGGKQEKVKQTAAKV------KEVQKTPSKPKEKEDKEKAAVSK 260
Query: 157 SDKEDQ 162
+++DQ
Sbjct: 261 HEQKDQ 266
Score = 32.3 bits (72), Expect = 0.20
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 90 KNRDIFAEALKIQESEE-----KVKYLQKAKTREEILQLLRKQREERISKELISLPYKPK 144
+ ++I + + QE E KV + +K K +E++ + K ++ KE I KP+
Sbjct: 139 RKKEIHKDKTEKQEKPERKIQTKVTHKEKEKGKEKVREK-EKPEKKATHKEKIEKKEKPE 197
Query: 145 ----AKEHKAKKVVSESDKEDQEEVK 166
AKE K K +S+++ ++EVK
Sbjct: 198 TKTLAKEQKKAKTAEKSEEKTKKEVK 223
Score = 31.6 bits (70), Expect = 0.34
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 7/53 (13%)
Query: 102 QESEEK--VKYL--QKAKTREEILQL---LRKQREERISKELISLPYKPKAKE 147
+ES+EK +K+L +K TR+E LQL + ++ R+SK++ +P KAKE
Sbjct: 620 KESKEKADMKHLREEKVSTRKESLQLHNVTKAEKPARVSKDVEDVPASKKAKE 672
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 37.7 bits (86), Expect = 0.005
Identities = 25/111 (22%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 51 ESQLVLRRDSSQRL--PVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKV 108
++Q + R+ + +L + + ++R ++ + Q+ A K + E +KI + +EK+
Sbjct: 890 QAQEIARQAAQIKLLRKLQKQEQARVAKEAKKQQAIMAAEEKRKQ--KEQIKIMKQQEKI 947
Query: 109 KYLQKAKTREE-----ILQLLRKQREERISKELISLPYKPKAKEHKAKKVV 154
K +Q+ + +E IL+ +K++EE + +L+ + K KE + ++ V
Sbjct: 948 KRIQQIRMEKELRAQQILEAKKKKKEEAANAKLLEAEKRIKEKEMRRQQAV 998
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 37.4 bits (85), Expect = 0.006
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 97 EALKIQESEEKVKYLQKAKTR-EEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVS 155
+ LKIQE +EK++ KA T E+LQ +R Q +ER +EL L + + E KK+V
Sbjct: 634 QQLKIQELQEKLEKAVKASTEATELLQNIR-QAKERAERELEKLQNREDSSEGIRKKLVE 692
Query: 156 ESDKEDQ 162
+ E++
Sbjct: 693 AEELEEK 699
>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
Length = 495
Score = 37.4 bits (85), Expect = 0.006
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 68 RPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQLLRKQ 127
+ R EN + ++ + D A K+QE+EEK LQ A T++ L+ + +Q
Sbjct: 258 KKREEMEEENRKIIEFANMQQQREEDRMA---KVQENEEKRLQLQNALTQK--LEEMLRQ 312
Query: 128 RE--ERISKELISLP----YKPKAKEHKAKKVVSESD-KEDQEEVKTL 168
RE E++ +EL YK K KE KK+ + + K+D EE L
Sbjct: 313 REDLEQVRQELYQEEQAEIYKSKLKEEAEKKLRKQKEMKQDFEEQMAL 360
>gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo
sapiens]
Length = 1297
Score = 35.8 bits (81), Expect = 0.018
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 49 PSESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALK-IQESEEK 107
P ES LRRD RL +A RS Q R + AE K I+E +E+
Sbjct: 345 PGES--TLRRDFL-RLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQ 401
Query: 108 VKYLQKAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQE 163
+ L++ + RE+ L+ +++ + R +E + + + EH+ + + + ++E ++
Sbjct: 402 RRRLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYIRRQLEEEQRQ 457
>gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo
sapiens]
Length = 1305
Score = 35.8 bits (81), Expect = 0.018
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 49 PSESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALK-IQESEEK 107
P ES LRRD RL +A RS Q R + AE K I+E +E+
Sbjct: 345 PGES--TLRRDFL-RLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQ 401
Query: 108 VKYLQKAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQE 163
+ L++ + RE+ L+ +++ + R +E + + + EH+ + + + ++E ++
Sbjct: 402 RRRLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYIRRQLEEEQRQ 457
>gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo
sapiens]
Length = 1352
Score = 35.8 bits (81), Expect = 0.018
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 49 PSESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALK-IQESEEK 107
P ES LRRD RL +A RS Q R + AE K I+E +E+
Sbjct: 345 PGES--TLRRDFL-RLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQ 401
Query: 108 VKYLQKAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQE 163
+ L++ + RE+ L+ +++ + R +E + + + EH+ + + + ++E ++
Sbjct: 402 RRRLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYIRRQLEEEQRQ 457
>gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo
sapiens]
Length = 1360
Score = 35.8 bits (81), Expect = 0.018
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 49 PSESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALK-IQESEEK 107
P ES LRRD RL +A RS Q R + AE K I+E +E+
Sbjct: 345 PGES--TLRRDFL-RLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQ 401
Query: 108 VKYLQKAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQE 163
+ L++ + RE+ L+ +++ + R +E + + + EH+ + + + ++E ++
Sbjct: 402 RRRLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYIRRQLEEEQRQ 457
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 35.8 bits (81), Expect = 0.018
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 56 LRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAK 115
L+++ Q L R +R R + L + + + E K + E + KY ++ +
Sbjct: 936 LQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEE 995
Query: 116 TREEILQLLRKQREERISKELISLPYKPK----------AKEHKAKKVVSESDKEDQEE 164
++E QLLR++RE+R +E Y+ K +E + K+ + E +++ +EE
Sbjct: 996 LQQEEEQLLREEREKRRRQEW-ERQYRKKDELQQEEEQLLREEREKRRLQERERQYREE 1053
Score = 30.8 bits (68), Expect = 0.58
Identities = 17/68 (25%), Positives = 39/68 (57%)
Query: 97 EALKIQESEEKVKYLQKAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSE 156
E K + E++ +Y ++ + ++E QLLR++RE+R +E K K + K ++++ E
Sbjct: 917 EREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGE 976
Query: 157 SDKEDQEE 164
++ + +
Sbjct: 977 EPEKRRRQ 984
Score = 30.8 bits (68), Expect = 0.58
Identities = 24/114 (21%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 51 ESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKY 110
E + +LR + +R R R+ R E L + + + E K + E + +Y
Sbjct: 1089 EEEQLLREEPEKRRRQERERQCREEEE--------LQQEEEQLLREEREKRRRQELERQY 1140
Query: 111 LQKAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQEE 164
++ + ++E QLLR++ E+R +EL + + + + ++++ E ++ ++E
Sbjct: 1141 REEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQE 1194
Score = 30.4 bits (67), Expect = 0.76
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 51 ESQLVLRRDSSQRLPVARPRRSRGSENS--HSSQSFHLASNKNRDIFAEALKIQESEEKV 108
+ QL+ R+ Q R R+ E + L +++R E +QE EE+
Sbjct: 1624 DEQLLQEREEQQLHRQERDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQEGEEQQ 1683
Query: 109 KYLQKA--KTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQ 162
Q+ K REE QL R++RE + +E L + ++ + ++ + + +++Q
Sbjct: 1684 LRRQERDRKFREEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQETEQEQ 1739
Score = 29.3 bits (64), Expect = 1.7
Identities = 22/109 (20%), Positives = 52/109 (47%)
Query: 56 LRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAK 115
L+++ Q L R +R R + L + + + E K + E + +Y ++ +
Sbjct: 996 LQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEE 1055
Query: 116 TREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQEE 164
++E QLL ++RE R +EL K + + + ++++ E ++ + +
Sbjct: 1056 LQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQ 1104
Score = 29.3 bits (64), Expect = 1.7
Identities = 21/111 (18%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 56 LRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAK 115
L+++ Q L R +R R + + + + + E K + E + +Y ++ +
Sbjct: 1116 LQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEE 1175
Query: 116 TREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQEEVK 166
++E QLLR+++E+R ++ Y+ + + + K+ D++ + ++K
Sbjct: 1176 LQQEEEQLLREEQEKR--RQERERQYREEEELQRQKRKQRYRDEDQRSDLK 1224
Score = 28.5 bits (62), Expect = 2.9
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 51 ESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKY 110
E + +LR + +R R R+ R E + L + E + EE+++
Sbjct: 1029 EEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQ 1088
Query: 111 LQKAKTREEILQLLRKQREERI-SKELISLPYKPKAKEHKAKKVVSESDKEDQEE 164
++ REE + R++RE + +E + + +E + K+ E +++ +EE
Sbjct: 1089 EEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREE 1143
Score = 28.1 bits (61), Expect = 3.8
Identities = 21/114 (18%), Positives = 51/114 (44%), Gaps = 18/114 (15%)
Query: 56 LRRDSSQRLPVA--RPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQK 113
L+R+ +RL R +R + E + L S + + + L+ ++ E + + L++
Sbjct: 602 LKREEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKR 661
Query: 114 AKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQEEVKT 167
+ E + Q L+++ EE E + +++ E ++ +E +K+
Sbjct: 662 EEEEERLEQRLKREHEE----------------ERREQELAEEEQEQARERIKS 699
Score = 27.7 bits (60), Expect = 4.9
Identities = 22/114 (19%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 51 ESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKY 110
+ Q L+ + Q + R R + Q + R E + Q+ E + +
Sbjct: 266 QRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQ 325
Query: 111 LQKAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQEE 164
++ + E Q LR+++EER ++L + + +E + +++ E ++E +E+
Sbjct: 326 ERREQQEERREQQLRREQEERREQQL----RREQEEERREQQLRREQEEERREQ 375
Score = 27.7 bits (60), Expect = 4.9
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 97 EALKIQESEEKVKYLQKAKTR------EEILQLLRKQREERISKELISLPYKPKAKEHKA 150
+ LK QE EE+++ +++ + E QLL+++ E+R+ +E K + +E +
Sbjct: 517 QRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRD 576
Query: 151 KKVVSESDKEDQ 162
+ + E ++ Q
Sbjct: 577 QLLKREEERRQQ 588
Score = 26.9 bits (58), Expect = 8.4
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 47 YPPSESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEE 106
Y E QL L + QRL R R+ R E + + + + ++++ QE E+
Sbjct: 1821 YRWEEEQLQLE-EQEQRLRQERDRQYRAEEQFATQEK---SRREEQELW------QEEEQ 1870
Query: 107 KVKYLQKAKTREEILQLLRKQREERISKEL 136
K + ++ K REE + R+Q+EE+ +++
Sbjct: 1871 KRRQERERKLREE--HIRRQQKEEQRHRQV 1898
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 35.4 bits (80), Expect = 0.024
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 19/100 (19%)
Query: 58 RDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTR 117
RD S PV R SE+S ++ +D + +K++++ EK K K K R
Sbjct: 1763 RDRSAASPVVSSMPERASESS----------SEEKDDYEIFVKVKDTHEKSK---KNKNR 1809
Query: 118 EEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSES 157
+ + ++E++ L S + K+ EHK++K SES
Sbjct: 1810 D------KGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSES 1843
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 35.4 bits (80), Expect = 0.024
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 19/100 (19%)
Query: 58 RDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTR 117
RD S PV R SE+S ++ +D + +K++++ EK K K K R
Sbjct: 1763 RDRSAASPVVSSMPERASESS----------SEEKDDYEIFVKVKDTHEKSK---KNKNR 1809
Query: 118 EEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSES 157
+ + ++E++ L S + K+ EHK++K SES
Sbjct: 1810 D------KGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSES 1843
>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
sapiens]
Length = 1268
Score = 34.7 bits (78), Expect = 0.040
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 49 PSESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALK-IQESEEK 107
P ES LRRD RL +A RS Q R + AE K I+E +E+
Sbjct: 345 PGES--TLRRDFL-RLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQ 401
Query: 108 VKYLQKAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQEE 164
+ L++ + RE+ L+ +++ + R +E + + + EH+ + + +++ Q E
Sbjct: 402 RRRLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYKRKQLEEQRQAE 458
>gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo
sapiens]
Length = 1276
Score = 34.7 bits (78), Expect = 0.040
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 49 PSESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALK-IQESEEK 107
P ES LRRD RL +A RS Q R + AE K I+E +E+
Sbjct: 345 PGES--TLRRDFL-RLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQ 401
Query: 108 VKYLQKAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQEE 164
+ L++ + RE+ L+ +++ + R +E + + + EH+ + + +++ Q E
Sbjct: 402 RRRLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYKRKQLEEQRQAE 458
>gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo
sapiens]
Length = 1323
Score = 34.7 bits (78), Expect = 0.040
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 49 PSESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALK-IQESEEK 107
P ES LRRD RL +A RS Q R + AE K I+E +E+
Sbjct: 345 PGES--TLRRDFL-RLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQ 401
Query: 108 VKYLQKAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQEE 164
+ L++ + RE+ L+ +++ + R +E + + + EH+ + + +++ Q E
Sbjct: 402 RRRLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYKRKQLEEQRQAE 458
>gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo
sapiens]
Length = 1331
Score = 34.7 bits (78), Expect = 0.040
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 49 PSESQLVLRRDSSQRLPVARPRRSRGSENSHSSQSFHLASNKNRDIFAEALK-IQESEEK 107
P ES LRRD RL +A RS Q R + AE K I+E +E+
Sbjct: 345 PGES--TLRRDFL-RLQLANKERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQ 401
Query: 108 VKYLQKAKTREEILQLLRKQREERISKELISLPYKPKAKEHKAKKVVSESDKEDQEE 164
+ L++ + RE+ L+ +++ + R +E + + + EH+ + + +++ Q E
Sbjct: 402 RRRLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRAEHEQEYKRKQLEEQRQAE 458
>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
sapiens]
Length = 2542
Score = 34.7 bits (78), Expect = 0.040
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 88 SNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQLLRKQREERISKELISLPYKPKAKE 147
+NKN I + L +++S E+ + A RE+ + +K++EE+ K+ KPK
Sbjct: 1424 ANKNASILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKENS 1483
Query: 148 HKAKKVVSESDKEDQEE 164
+ E + ED E+
Sbjct: 1484 ELPEDEDEEENDEDVEQ 1500
>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
Length = 2617
Score = 34.7 bits (78), Expect = 0.040
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 88 SNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQLLRKQREERISKELISLPYKPKAKE 147
+NKN I + L +++S E+ + A RE+ + +K++EE+ K+ KPK
Sbjct: 1424 ANKNASILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKENS 1483
Query: 148 HKAKKVVSESDKEDQEE 164
+ E + ED E+
Sbjct: 1484 ELPEDEDEEENDEDVEQ 1500
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 34.3 bits (77), Expect = 0.052
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 65 PVARPRRSRGSENSHS-SQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQL 123
P +R RRS SHS S+S S K+R + + + S K + ++ +R
Sbjct: 177 PGSRRRRSYSRSRSHSRSRSRSRHSRKSR---SRSGSSKSSHSKSRSRSRSGSRSRSKSR 233
Query: 124 LRKQREERISKELISLPYKPK--AKEHKAKKVVSESDKEDQEEVKTLD 169
R Q R KE P K K ++ H A K S+S + +E+++ D
Sbjct: 234 SRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNND 281
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 34.3 bits (77), Expect = 0.052
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 31 EQDANLAKQFWISASMYPPSESQLVLRRDSSQRL--PVARPRRSRGSEN---------SH 79
E+ AKQ+ + Y E QLV + + + P +P+ GSE+ +H
Sbjct: 1266 EECQRFAKQYINAIKDY---ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTH 1322
Query: 80 SSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQL---LRKQRE------- 129
S+ L S + I +E L+ E EE++ Q+A+ RE + ++ L KQR+
Sbjct: 1323 YSELTTLTSQYIKFI-SETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQ 1381
Query: 130 -----ERISKELISLPYKPKAKEHKAKKVVSESDKEDQEEVKTL 168
ER +KEL + + +A + + QEE++ L
Sbjct: 1382 AKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQQL 1425
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 34.3 bits (77), Expect = 0.052
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 31 EQDANLAKQFWISASMYPPSESQLVLRRDSSQRL--PVARPRRSRGSEN---------SH 79
E+ AKQ+ + Y E QLV + + + P +P+ GSE+ +H
Sbjct: 1270 EECQRFAKQYINAIKDY---ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTH 1326
Query: 80 SSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQL---LRKQRE------- 129
S+ L S + I +E L+ E EE++ Q+A+ RE + ++ L KQR+
Sbjct: 1327 YSELTTLTSQYIKFI-SETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQ 1385
Query: 130 -----ERISKELISLPYKPKAKEHKAKKVVSESDKEDQEEVKTL 168
ER +KEL + + +A + + QEE++ L
Sbjct: 1386 AKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQQL 1429
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 34.3 bits (77), Expect = 0.052
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 31 EQDANLAKQFWISASMYPPSESQLVLRRDSSQRL--PVARPRRSRGSEN---------SH 79
E+ AKQ+ + Y E QLV + + + P +P+ GSE+ +H
Sbjct: 1266 EECQRFAKQYINAIKDY---ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTH 1322
Query: 80 SSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQL---LRKQRE------- 129
S+ L S + I +E L+ E EE++ Q+A+ RE + ++ L KQR+
Sbjct: 1323 YSELTTLTSQYIKFI-SETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQ 1381
Query: 130 -----ERISKELISLPYKPKAKEHKAKKVVSESDKEDQEEVKTL 168
ER +KEL + + +A + + QEE++ L
Sbjct: 1382 AKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQQL 1425
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 34.3 bits (77), Expect = 0.052
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 31 EQDANLAKQFWISASMYPPSESQLVLRRDSSQRL--PVARPRRSRGSEN---------SH 79
E+ AKQ+ + Y E QLV + + + P +P+ GSE+ +H
Sbjct: 1234 EECQRFAKQYINAIKDY---ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTH 1290
Query: 80 SSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQL---LRKQRE------- 129
S+ L S + I +E L+ E EE++ Q+A+ RE + ++ L KQR+
Sbjct: 1291 YSELTTLTSQYIKFI-SETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQ 1349
Query: 130 -----ERISKELISLPYKPKAKEHKAKKVVSESDKEDQEEVKTL 168
ER +KEL + + +A + + QEE++ L
Sbjct: 1350 AKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQQL 1393
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 34.3 bits (77), Expect = 0.052
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 31 EQDANLAKQFWISASMYPPSESQLVLRRDSSQRL--PVARPRRSRGSEN---------SH 79
E+ AKQ+ + Y E QLV + + + P +P+ GSE+ +H
Sbjct: 1403 EECQRFAKQYINAIKDY---ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTH 1459
Query: 80 SSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQL---LRKQRE------- 129
S+ L S + I +E L+ E EE++ Q+A+ RE + ++ L KQR+
Sbjct: 1460 YSELTTLTSQYIKFI-SETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQ 1518
Query: 130 -----ERISKELISLPYKPKAKEHKAKKVVSESDKEDQEEVKTL 168
ER +KEL + + +A + + QEE++ L
Sbjct: 1519 AKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQQL 1562
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 34.3 bits (77), Expect = 0.052
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 31 EQDANLAKQFWISASMYPPSESQLVLRRDSSQRL--PVARPRRSRGSEN---------SH 79
E+ AKQ+ + Y E QLV + + + P +P+ GSE+ +H
Sbjct: 1244 EECQRFAKQYINAIKDY---ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTH 1300
Query: 80 SSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQL---LRKQRE------- 129
S+ L S + I +E L+ E EE++ Q+A+ RE + ++ L KQR+
Sbjct: 1301 YSELTTLTSQYIKFI-SETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQ 1359
Query: 130 -----ERISKELISLPYKPKAKEHKAKKVVSESDKEDQEEVKTL 168
ER +KEL + + +A + + QEE++ L
Sbjct: 1360 AKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQQL 1403
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.123 0.327
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,602,384
Number of Sequences: 37866
Number of extensions: 274846
Number of successful extensions: 2133
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 252
Number of HSP's that attempted gapping in prelim test: 1715
Number of HSP's gapped (non-prelim): 624
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.