Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 153946405
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153946405 BCL2/adenovirus E1B 19kD interacting protein 1
isoform BNIP1-c [Homo sapiens]
(237 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153946405 BCL2/adenovirus E1B 19kD interacting protein 1 isof... 457 e-129
gi|153946399 BCL2/adenovirus E1B 19kD interacting protein 1 isof... 439 e-124
gi|153946403 BCL2/adenovirus E1B 19kD interacting protein 1 isof... 347 4e-96
gi|153946401 BCL2/adenovirus E1B 19kD interacting protein 1 isof... 330 7e-91
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 37 0.019
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 37 0.019
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 36 0.025
gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1 ... 35 0.043
gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1 ... 35 0.043
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 35 0.057
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 34 0.097
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 34 0.097
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 34 0.097
gi|4758650 kinesin family member 5C [Homo sapiens] 34 0.13
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 34 0.13
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 34 0.13
gi|126012497 dynein, axonemal, heavy polypeptide 8 [Homo sapiens] 34 0.13
gi|126362971 serine/threonine kinase 10 [Homo sapiens] 33 0.16
gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo... 33 0.16
gi|41872583 Rho-associated, coiled-coil containing protein kinas... 33 0.28
gi|219803769 trichoplein [Homo sapiens] 33 0.28
gi|14150056 trichoplein [Homo sapiens] 33 0.28
gi|4504063 golgin 97 [Homo sapiens] 33 0.28
gi|31542779 tripartite motif family-like 1 [Homo sapiens] 32 0.37
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 32 0.37
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 32 0.48
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 32 0.48
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 32 0.48
gi|33457330 tetratricopeptide repeat domain 14 isoform a [Homo s... 32 0.48
gi|110815815 centlein isoform 1 [Homo sapiens] 32 0.48
>gi|153946405 BCL2/adenovirus E1B 19kD interacting protein 1 isoform
BNIP1-c [Homo sapiens]
Length = 237
Score = 457 bits (1175), Expect = e-129
Identities = 237/237 (100%), Positives = 237/237 (100%)
Query: 1 MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQP 60
MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQP
Sbjct: 1 MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQP 60
Query: 61 VLYQRAFIWTASTFFFKLTYSLTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQLL 120
VLYQRAFIWTASTFFFKLTYSLTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQLL
Sbjct: 61 VLYQRAFIWTASTFFFKLTYSLTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQLL 120
Query: 121 LQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTIL 180
LQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTIL
Sbjct: 121 LQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTIL 180
Query: 181 DANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL 237
DANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL
Sbjct: 181 DANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL 237
>gi|153946399 BCL2/adenovirus E1B 19kD interacting protein 1 isoform
BNIP1-b [Homo sapiens]
Length = 271
Score = 439 bits (1130), Expect = e-124
Identities = 237/271 (87%), Positives = 237/271 (87%), Gaps = 34/271 (12%)
Query: 1 MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQP 60
MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQP
Sbjct: 1 MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQP 60
Query: 61 VLYQRAFIWTASTFFFKLTYSLTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQLL 120
VLYQRAFIWTASTFFFKLTYSLTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQLL
Sbjct: 61 VLYQRAFIWTASTFFFKLTYSLTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQLL 120
Query: 121 LQEVENHKKQML----------------------------------RKTTKESLAQTSST 146
LQEVENHKKQML RKTTKESLAQTSST
Sbjct: 121 LQEVENHKKQMLSNQASWRKANLTCKIAIDNLEKAELLQGGDLLRQRKTTKESLAQTSST 180
Query: 147 ITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRR 206
ITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRR
Sbjct: 181 ITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRR 240
Query: 207 ELTDKLLIFLALALFLATVLYIVKKRLFPFL 237
ELTDKLLIFLALALFLATVLYIVKKRLFPFL
Sbjct: 241 ELTDKLLIFLALALFLATVLYIVKKRLFPFL 271
>gi|153946403 BCL2/adenovirus E1B 19kD interacting protein 1 isoform
BNIP1-a [Homo sapiens]
Length = 194
Score = 347 bits (891), Expect = 4e-96
Identities = 194/237 (81%), Positives = 194/237 (81%), Gaps = 43/237 (18%)
Query: 1 MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQP 60
MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQ
Sbjct: 1 MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQ- 59
Query: 61 VLYQRAFIWTASTFFFKLTYSLTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQLL 120
DLEQLAKEQDKESEKQLL
Sbjct: 60 ------------------------------------------DLEQLAKEQDKESEKQLL 77
Query: 121 LQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTIL 180
LQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTIL
Sbjct: 78 LQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTIL 137
Query: 181 DANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL 237
DANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL
Sbjct: 138 DANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL 194
>gi|153946401 BCL2/adenovirus E1B 19kD interacting protein 1 isoform
BNIP1 [Homo sapiens]
Length = 228
Score = 330 bits (846), Expect = 7e-91
Identities = 194/271 (71%), Positives = 194/271 (71%), Gaps = 77/271 (28%)
Query: 1 MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQP 60
MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQ
Sbjct: 1 MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQ- 59
Query: 61 VLYQRAFIWTASTFFFKLTYSLTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQLL 120
DLEQLAKEQDKESEKQLL
Sbjct: 60 ------------------------------------------DLEQLAKEQDKESEKQLL 77
Query: 121 LQEVENHKKQML----------------------------------RKTTKESLAQTSST 146
LQEVENHKKQML RKTTKESLAQTSST
Sbjct: 78 LQEVENHKKQMLSNQASWRKANLTCKIAIDNLEKAELLQGGDLLRQRKTTKESLAQTSST 137
Query: 147 ITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRR 206
ITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRR
Sbjct: 138 ITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRR 197
Query: 207 ELTDKLLIFLALALFLATVLYIVKKRLFPFL 237
ELTDKLLIFLALALFLATVLYIVKKRLFPFL
Sbjct: 198 ELTDKLLIFLALALFLATVLYIVKKRLFPFL 228
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 36.6 bits (83), Expect = 0.019
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 102 SDLEQLAKEQDKESEKQLLLQEVENHKKQMLRKTT----------KESLA----QTSSTI 147
S E+ KE++KE+EK+ EVEN K+ +L++ T KE++A +T+++
Sbjct: 516 SQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQ 575
Query: 148 TESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNR 205
I+R MA + SEEA+ ++ ++ NE + ++ +K + ++ R
Sbjct: 576 GRRKGRITRSMANEA-NSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGR 632
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 36.6 bits (83), Expect = 0.019
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 102 SDLEQLAKEQDKESEKQLLLQEVENHKKQMLRKTT----------KESLA----QTSSTI 147
S E+ KE++KE+EK+ EVEN K+ +L++ T KE++A +T+++
Sbjct: 516 SQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQ 575
Query: 148 TESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNR 205
I+R MA + SEEA+ ++ ++ NE + ++ +K + ++ R
Sbjct: 576 GRRKGRITRSMANEA-NSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGR 632
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 36.2 bits (82), Expect = 0.025
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 103 DLEQLAKEQDKESEK-QLLLQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQ 161
+L++L + E EK Q+ + + H++ M + T + +T+ + E + Q
Sbjct: 1234 ELQELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREE----KERLEQD 1289
Query: 162 VQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRR 206
+QQ + ++ L + +AN E SG +Q +KL+ + +R
Sbjct: 1290 LQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEKKLLEEDVKR 1334
Score = 32.0 bits (71), Expect = 0.48
Identities = 24/105 (22%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
Query: 107 LAKEQDKESEK-QLLLQEVENHKKQMLRKTT-----KESLAQTSSTIT--ESLMGISRMM 158
+++++D ++E+ + LL E E H K++ + T K +A++++++T ++L+ +
Sbjct: 1343 VSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKED 1402
Query: 159 AQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKY 203
+V+ +E +Q + + I+D E+ K+++ ++GR+ T+Y
Sbjct: 1403 LNKVRTEKETIQKDLDAK--IIDIQEKVKTITQVKKIGRRYKTQY 1445
>gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1
[Homo sapiens]
Length = 1288
Score = 35.4 bits (80), Expect = 0.043
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 22 EVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQPVLYQRAFIWTASTFFFKLTYS 81
E+KA +D++D L+ +T+ + KEKF QL V R + A++ KL
Sbjct: 361 EMKAKNKDVKDTEKKLNKITKFIEENKEKFTQLDLEDVQV---REKLKHATSKAKKLEKQ 417
Query: 82 LTDFSSTQHDFNSPTTP------VTFSDLEQLAKEQDKESEK------------QLLLQE 123
L +F S T + L KE++KE +K Q L +E
Sbjct: 418 LQKDKEKVEEFKSIPAKSNNIINETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQKE 477
Query: 124 VENHKKQMLRKTTKESLAQTSSTITESLMGI--SRMMAQQVQQSEEAMQSLVTSSRTILD 181
E+ +K+++ + + A++ + +S + I SR V Q +A ++L+ +S T+ +
Sbjct: 478 KESREKELMGFSKSVNEARSKMDVAQSELDIYLSRHNT-AVSQLTKAKEALIAASETLKE 536
Query: 182 ANEEFKSMSGTI 193
+ + G +
Sbjct: 537 RKAAIRDIEGKL 548
>gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1
[Homo sapiens]
Length = 1288
Score = 35.4 bits (80), Expect = 0.043
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 22 EVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQPVLYQRAFIWTASTFFFKLTYS 81
E+KA +D++D L+ +T+ + KEKF QL V R + A++ KL
Sbjct: 361 EMKAKNKDVKDTEKKLNKITKFIEENKEKFTQLDLEDVQV---REKLKHATSKAKKLEKQ 417
Query: 82 LTDFSSTQHDFNSPTTP------VTFSDLEQLAKEQDKESEK------------QLLLQE 123
L +F S T + L KE++KE +K Q L +E
Sbjct: 418 LQKDKEKVEEFKSIPAKSNNIINETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQKE 477
Query: 124 VENHKKQMLRKTTKESLAQTSSTITESLMGI--SRMMAQQVQQSEEAMQSLVTSSRTILD 181
E+ +K+++ + + A++ + +S + I SR V Q +A ++L+ +S T+ +
Sbjct: 478 KESREKELMGFSKSVNEARSKMDVAQSELDIYLSRHNT-AVSQLTKAKEALIAASETLKE 536
Query: 182 ANEEFKSMSGTI 193
+ + G +
Sbjct: 537 RKAAIRDIEGKL 548
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 35.0 bits (79), Expect = 0.057
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 22 EVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQPVLYQRAFIWTASTFFFKLTYS 81
E++ + + + + G S E+N K + +FQ++R ++ Q TA+ K S
Sbjct: 1142 ELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEA--TAAALRKKHADS 1199
Query: 82 LTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKE-SEKQLLLQEVENHKKQMLR-KTTKES 139
+ + +L+++ ++ +KE SE +L L +V ++ +Q+++ K E
Sbjct: 1200 VAELGE------------QIDNLQRVKQKLEKEKSEFKLELDDVTSNMEQIIKAKANLEK 1247
Query: 140 LAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKL 199
+ +T E M R A++ Q+S + TS R L E +S + L
Sbjct: 1248 MCRT----LEDQMNEHRSKAEETQRSVNDL----TSQRAKLQT--ENGELSRQLDEKEAL 1297
Query: 200 ITKYNRRELT 209
I++ R +LT
Sbjct: 1298 ISQLTRGKLT 1307
Score = 30.4 bits (67), Expect = 1.4
Identities = 17/68 (25%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 105 EQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQ 164
EQ +E + ++E Q +L + + Q K +++ +T E L + +AQ++Q+
Sbjct: 1345 EQYEEETEAKAELQRVLSKANSEVAQWRTKYETDAIQRT-----EELEEAKKKLAQRLQE 1399
Query: 165 SEEAMQSL 172
+EEA++++
Sbjct: 1400 AEEAVEAV 1407
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 34.3 bits (77), Expect = 0.097
Identities = 37/185 (20%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 22 EVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQPVLYQRAFIWTASTFFFKLTYS 81
E++ + + + + SG SA E+N K + +FQ++R ++ Q TA+T K S
Sbjct: 1146 ELEEISERLEEASGATSAQIEMNKKREAEFQKMRRDLEEATLQHEA--TAATLRKKQADS 1203
Query: 82 LTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKE-SEKQLLLQEVENHKKQMLRKTTKESL 140
+ + +L+++ ++ +KE SE ++ + ++ ++ + + + +K ++
Sbjct: 1204 VAELGE------------QIDNLQRVKQKLEKEKSELKMEIDDMASNIEALSK--SKSNI 1249
Query: 141 AQTSSTITESLMGISRMMAQQVQQSEEA-MQS--LVTSSRTILDANEEFKSMSGTIQLGR 197
+T T+ + I QQ Q + MQ L T + + EE +S+ + +
Sbjct: 1250 ERTCRTVEDQFSEIKAKDEQQTQLIHDLNMQKARLQTQNGELSHRVEEKESLISQLTKSK 1309
Query: 198 KLITK 202
+ +T+
Sbjct: 1310 QALTQ 1314
Score = 28.5 bits (62), Expect = 5.3
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 105 EQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQ 164
EQ +EQ+ ++E Q L + + Q K +++ +T E L + +AQ++Q+
Sbjct: 1349 EQYEEEQEAKAELQRALSKANSEVAQWRTKYETDAIQRT-----EELEEAKKKLAQRLQE 1403
Query: 165 SEE 167
+EE
Sbjct: 1404 AEE 1406
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 34.3 bits (77), Expect = 0.097
Identities = 41/201 (20%), Positives = 82/201 (40%), Gaps = 13/201 (6%)
Query: 14 QEIVKFDLEVKAL---IQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQPVLYQRAFIWT 70
+EIV E+KA + I++C A + + KF+ ++ L ++ ++
Sbjct: 945 EEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKYS 1004
Query: 71 ASTFFFKLTYSLTD-----FSSTQHDFNSPTTPVTFS-DLEQLAKEQDKESEKQLLLQEV 124
S K D + Q D T + S ++E+ + E KQL
Sbjct: 1005 VSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLK---- 1060
Query: 125 ENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANE 184
+ +K K KE L + ++ T ++ + ++ +Q E+ + + TI + E
Sbjct: 1061 DLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKE 1120
Query: 185 EFKSMSGTIQLGRKLITKYNR 205
E KSM + ++ +TK ++
Sbjct: 1121 ELKSMQRCYEKEQQTVTKLHQ 1141
Score = 29.3 bits (64), Expect = 3.1
Identities = 24/114 (21%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 105 EQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKE-----SLAQTSSTITESLMGISRMMA 159
E+ + Q+K E L EV+N K+ + + T+E T S + + ++ +A
Sbjct: 1176 EKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLA 1235
Query: 160 QQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLL 213
++ EE + ++ + + + A +E + + +I+ K +++E DK L
Sbjct: 1236 NLNRKYEEVCEEVLHAKKKEISAKDEKELLHFSIEQEIK-----DQKERCDKSL 1284
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 34.3 bits (77), Expect = 0.097
Identities = 41/201 (20%), Positives = 82/201 (40%), Gaps = 13/201 (6%)
Query: 14 QEIVKFDLEVKAL---IQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQPVLYQRAFIWT 70
+EIV E+KA + I++C A + + KF+ ++ L ++ ++
Sbjct: 958 EEIVTLHAEIKAQKKELDTIQECIKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKYS 1017
Query: 71 ASTFFFKLTYSLTD-----FSSTQHDFNSPTTPVTFS-DLEQLAKEQDKESEKQLLLQEV 124
S K D + Q D T + S ++E+ + E KQL
Sbjct: 1018 VSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDELNKQLK---- 1073
Query: 125 ENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANE 184
+ +K K KE L + ++ T ++ + ++ +Q E+ + + TI + E
Sbjct: 1074 DLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEALKKSLNGTIENLKE 1133
Query: 185 EFKSMSGTIQLGRKLITKYNR 205
E KSM + ++ +TK ++
Sbjct: 1134 ELKSMQRCYEKEQQTVTKLHQ 1154
Score = 29.3 bits (64), Expect = 3.1
Identities = 24/114 (21%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 105 EQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKE-----SLAQTSSTITESLMGISRMMA 159
E+ + Q+K E L EV+N K+ + + T+E T S + + ++ +A
Sbjct: 1189 EKEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLA 1248
Query: 160 QQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLL 213
++ EE + ++ + + + A +E + + +I+ K +++E DK L
Sbjct: 1249 NLNRKYEEVCEEVLHAKKKEISAKDEKELLHFSIEQEIK-----DQKERCDKSL 1297
>gi|4758650 kinesin family member 5C [Homo sapiens]
Length = 957
Score = 33.9 bits (76), Expect = 0.13
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 19/162 (11%)
Query: 11 ICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQPVLYQRAFIWT 70
I +E K+D E+ +L + + D ++ ++L K+K Q +L Q + +
Sbjct: 409 ISTEEKEKYDEEISSLYRQLDDKDDEINQQSQLAEKLK----------QQMLDQDELLAS 458
Query: 71 ASTFFFKLTYSLTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQLLLQEVENHKKQ 130
+ K+ LT +++ LE+LA D++S QEVE+ K
Sbjct: 459 TRRDYEKIQEELTRL-QIENEAAKDEVKEVLQALEELAVNYDQKS------QEVED--KT 509
Query: 131 MLRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSL 172
+ + LAQ ++T+T + +S++ Q + A + L
Sbjct: 510 RANEQLTDELAQKTTTLTTTQRELSQLQELSNHQKKRATEIL 551
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 33.9 bits (76), Expect = 0.13
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Query: 40 LTELNTKVKEKFQQLR-----------HRIQPVLYQRAFIWTASTFFFKLTYSLTDFSST 88
LTE + K++ +FQQL+ +L + I T + + L D+
Sbjct: 231 LTEQSQKLQIQFQQLQASETLRNSTHSSTAADLLQAKQQILTHQQQLEEQDHLLEDYQKK 290
Query: 89 QHDFNSPTTPVTF--SDLEQLAKEQDKE---------SEKQLLLQEVENHKKQMLRKTTK 137
+ DF T ++F ++ EQDK+ EK+ +++E+ + +KT +
Sbjct: 291 KEDF---TMQISFLQEKIKVYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLE 347
Query: 138 ESLAQTSSTITESLMG-ISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQ 194
+ T + L+G + + Q+ Q+ + L S + ++EE K + GT++
Sbjct: 348 ---LKDKLTTADKLLGELQEQIVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVE 402
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 33.9 bits (76), Expect = 0.13
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Query: 40 LTELNTKVKEKFQQLR-----------HRIQPVLYQRAFIWTASTFFFKLTYSLTDFSST 88
LTE + K++ +FQQL+ +L + I T + + L D+
Sbjct: 231 LTEQSQKLQIQFQQLQASETLRNSTHSSTAADLLQAKQQILTHQQQLEEQDHLLEDYQKK 290
Query: 89 QHDFNSPTTPVTF--SDLEQLAKEQDKE---------SEKQLLLQEVENHKKQMLRKTTK 137
+ DF T ++F ++ EQDK+ EK+ +++E+ + +KT +
Sbjct: 291 KEDF---TMQISFLQEKIKVYEMEQDKKVENSNKEEIQEKETIIEELNTKIIEEEKKTLE 347
Query: 138 ESLAQTSSTITESLMG-ISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQ 194
+ T + L+G + + Q+ Q+ + L S + ++EE K + GT++
Sbjct: 348 ---LKDKLTTADKLLGELQEQIVQKNQEIKNMKLELTNSKQKERQSSEEIKQLMGTVE 402
>gi|126012497 dynein, axonemal, heavy polypeptide 8 [Homo sapiens]
Length = 4490
Score = 33.9 bits (76), Expect = 0.13
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 107 LAKEQDKESEKQLLLQEVENHKKQM--LRKTTKESLAQTSSTIT--ESLMGISRMMAQQV 162
L ++Q+ E+E+ LL++V +K++M L L+ T ++ ESL+G+ R Q
Sbjct: 3598 LTEKQELEAERVKLLEDVTFNKRKMKELEDNLLYKLSATKGSLVDDESLIGVLRTTKQTA 3657
Query: 163 QQSEEAMQSLVTSSRTILDANEEFK 187
+ E + + I A EEF+
Sbjct: 3658 AEVSEKLHVAAETEIKINAAQEEFR 3682
>gi|126362971 serine/threonine kinase 10 [Homo sapiens]
Length = 968
Score = 33.5 bits (75), Expect = 0.16
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 103 DLEQLAKEQDKE-----SEKQLLLQEVENHKKQMLRKTTKESLAQTSSTITESLMGISR- 156
+ ++ EQD++ + +L+ +EV+N +++ R+ KES+ Q T+ + R
Sbjct: 638 EARRIRLEQDRDYTRFQEQLKLMKKEVKNEVEKLPRQQRKESMKQKMEEHTQKKQLLDRD 697
Query: 157 MMAQQVQQSEEAMQSLVTSSR 177
+A+Q + E AM+ L T +R
Sbjct: 698 FVAKQKEDLELAMKRLTTDNR 718
>gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo
sapiens]
Length = 805
Score = 33.5 bits (75), Expect = 0.16
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Query: 100 TFSDLEQLAKE-QDKESEKQLLLQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMM 158
T LE++ K+ QDKE+ QL+ Q+ KK+ TT +SL Q E + + +
Sbjct: 548 TEKKLEEIKKQCQDKET--QLICQK----KKEKELVTTVQSLQQKVERCLEDGIRLPMLD 601
Query: 159 AQQVQQSEEAMQSLVTSSRTILDANE--------EFKSMSGTIQLGRKLITKYNRRELTD 210
A+Q+Q + ++ ++ I+D+ + E +SM G + KL T+ EL
Sbjct: 602 AKQLQNENDNLRQQNETASKIIDSQQDEIDRMILEIQSMQGKLS-KEKLTTQKMMEELEK 660
Query: 211 K 211
K
Sbjct: 661 K 661
>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
[Homo sapiens]
Length = 1388
Score = 32.7 bits (73), Expect = 0.28
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 99 VTFSDLEQLAK----EQDKESEKQLLLQEVE------NHKKQMLRK-TTKESLAQTSSTI 147
+T +D EQLA+ EQ + EK+ +++E+E HK+++ K T SL +T+ T+
Sbjct: 919 LTKADSEQLARSIAEEQYSDLEKEKIMKELEIKEMMARHKQELTEKDATIASLEETNRTL 978
Query: 148 TESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITK 202
T + ++ + + ++ + L SR +EE + + Q ++L+T+
Sbjct: 979 TSDVANLANEKEELNNKLKDVQEQL---SRL---KDEEISAAAIKAQFEKQLLTE 1027
>gi|219803769 trichoplein [Homo sapiens]
Length = 498
Score = 32.7 bits (73), Expect = 0.28
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 105 EQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKESLAQTSS---TITESLMGISRMMAQQ 161
EQL E+ +E+E Q+LL+E K+M K E + S+ ++E L G + + ++
Sbjct: 334 EQLQLERAREAELQMLLRE---EAKEMWEKREAEWARERSARDRLMSEVLTGRQQQIQEK 390
Query: 162 VQQSEEAMQSLVTSSRTILDANEEFKSMS 190
++Q+ A + + ++ EE + ++
Sbjct: 391 IEQNRRAQEESLKHREQLIRNLEEVRELA 419
>gi|14150056 trichoplein [Homo sapiens]
Length = 498
Score = 32.7 bits (73), Expect = 0.28
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 105 EQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKESLAQTSS---TITESLMGISRMMAQQ 161
EQL E+ +E+E Q+LL+E K+M K E + S+ ++E L G + + ++
Sbjct: 334 EQLQLERAREAELQMLLRE---EAKEMWEKREAEWARERSARDRLMSEVLTGRQQQIQEK 390
Query: 162 VQQSEEAMQSLVTSSRTILDANEEFKSMS 190
++Q+ A + + ++ EE + ++
Sbjct: 391 IEQNRRAQEESLKHREQLIRNLEEVRELA 419
>gi|4504063 golgin 97 [Homo sapiens]
Length = 767
Score = 32.7 bits (73), Expect = 0.28
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 104 LEQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQ--Q 161
LE++ K++++ ++ L + + K+Q LR+ T E L Q I + G + + Q Q
Sbjct: 486 LEEVRKQREEFQQQAANLTAIIDEKEQNLREKT-EVLLQKEQEILQLERGHNSALLQIHQ 544
Query: 162 VQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQ 194
+Q EA+++L ++ E+ + G +Q
Sbjct: 545 LQAELEALRTLKAEEAAVVAEQEDLLRLRGPLQ 577
>gi|31542779 tripartite motif family-like 1 [Homo sapiens]
Length = 468
Score = 32.3 bits (72), Expect = 0.37
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 105 EQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQ 164
E + Q + E+QL LQ +E +K+ +RK L +T+ + +S+M+AQ
Sbjct: 181 EYMKMHQFLKEEEQLQLQLLEQEEKENMRK-----LRNNEIKLTQQIRSLSKMIAQIESS 235
Query: 165 SEEAMQSLVTSSRTILDANE 184
S+ + + R L+ +E
Sbjct: 236 SQSSAFESLEEVRGALERSE 255
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 32.3 bits (72), Expect = 0.37
Identities = 27/123 (21%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 82 LTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQL--LLQEVENHKKQMLRKTTKES 139
LTD + D +LE+ K +D +S++Q+ L +E++ KK + T +
Sbjct: 932 LTDLQLQEADEEKERILAQLRELEKKKKLEDAKSQEQVFGLDKELKKLKKAV---ATSDK 988
Query: 140 LAQTSSTITE--------SLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSG 191
LA TI + ++M I++ A+++Q++E + ++R + A E + +
Sbjct: 989 LATAELTIAKDQLKSLHGTVMKINQERAEELQEAERFSRKAAQAARDLTRAEAEIELLQN 1048
Query: 192 TIQ 194
++
Sbjct: 1049 LLR 1051
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 32.0 bits (71), Expect = 0.48
Identities = 40/203 (19%), Positives = 80/203 (39%), Gaps = 53/203 (26%)
Query: 7 VHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQPVLYQRA 66
V ++ C +I D E++ L ++I +S + N ++E R ++P
Sbjct: 463 VEIKNCKNQIKIRDREIEILTKEINKLELKISDFLDENEALRE-----RVGLEP------ 511
Query: 67 FIWTASTFFFKLTYSLTDFSSTQHDFNSPTTPVTFSDLEQLAKEQDKESEKQLLLQEVE- 125
K LT+F +++H K+Q +E Q+LL+E+E
Sbjct: 512 ----------KTMIDLTEFRNSKH-----------------LKQQQYRAENQILLKEIES 544
Query: 126 ------NHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTI 179
+ KK++ + + +S +T + ++ ++Q + SE + L + +
Sbjct: 545 LEEERLDLKKKIRQMAQERGKRSATSGLTTEDLNLTENISQGDRISERKLDLLSLKNMSE 604
Query: 180 LDANEEFKSMSGTIQLGRKLITK 202
+ EF L R+LI K
Sbjct: 605 AQSKNEF--------LSRELIEK 619
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 32.0 bits (71), Expect = 0.48
Identities = 20/85 (23%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 105 EQLAKEQDKESEKQLLLQEVE---NHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQ 161
+QL ++Q ++ ++Q LQ+ + ++Q L++ ++ L Q + + + QQ
Sbjct: 3910 QQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQ----QQQQQQQ 3965
Query: 162 VQQSEEAMQ-SLVTSSRTILDANEE 185
QQ ++ Q L+ SRT+L ++
Sbjct: 3966 FQQQQQQQQMGLLNQSRTLLSPQQQ 3990
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 32.0 bits (71), Expect = 0.48
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 102 SDLEQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKE--SLAQTSSTITESLMGISRMMA 159
S E L Q+KE ++ L L+E+E KK +L ++ + L Q + T ++ + +
Sbjct: 518 SQSEYLKISQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLE 577
Query: 160 QQVQQSEEAMQSL 172
+ +Q+++ + L
Sbjct: 578 KSLQENKNQSKDL 590
Score = 32.0 bits (71), Expect = 0.48
Identities = 23/109 (21%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 103 DLEQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQV 162
DL L KE +E E +L +E + +++ +++ ++ + +ST+ + + + +AQ+
Sbjct: 1952 DLRMLRKEHQQELE--ILKKEYDQEREEKIKQEQEDLELKHNSTLKQLMREFNTQLAQKE 2009
Query: 163 QQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDK 211
Q+ E ++ + ++ + +A T QL +K+ K + + T K
Sbjct: 2010 QELEMTIKETINKAQEV-EAELLESHQEETNQLLKKIAEKDDDLKRTAK 2057
>gi|33457330 tetratricopeptide repeat domain 14 isoform a [Homo
sapiens]
Length = 770
Score = 32.0 bits (71), Expect = 0.48
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 100 TFSDLEQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMA 159
TF D E ++ K +K L L+E + K++ +KT K +TS+ L+ + +
Sbjct: 414 TFKDAEDALQKLHKYMQKSLELREKQAEKEEK-QKTKK---IETSAEKLRKLLKEEKRLK 469
Query: 160 QQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNR 205
++ ++S TSS ++ A+E S S + G K K+ R
Sbjct: 470 KKRRKS--------TSSSSVSSADESVSSSSSSSSSGHKRHKKHKR 507
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 32.0 bits (71), Expect = 0.48
Identities = 33/179 (18%), Positives = 78/179 (43%), Gaps = 7/179 (3%)
Query: 15 EIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQPVLYQRAFIWTASTF 74
E+ K VK L ++ + + E ++++ RH I+ + +++ ++
Sbjct: 1107 ELTKQSSNVKTLKFELLAKEEHIKEMHEKISRMERDITMKRHLIEDLKFRQKVNLESNKS 1166
Query: 75 FFKLTYSLTDFSSTQHDFNSPTTPVTFSDLEQ---LAKEQDKESEKQLLLQEVENHKKQM 131
F ++ +L T + S V+ L+Q +A ++ + E+ + E KK +
Sbjct: 1167 FSEMLQNLDKKVKTLTEECS-NKKVSIDSLKQRLNVAVKEKSQYEQMYQKSKEELEKKDL 1225
Query: 132 LRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMS 190
+++T S + E S+ + + QSE+ ++ + +T+L ANE+ + +
Sbjct: 1226 KLTLLVSRISETESAMAEIETAASKQLQELALQSEQVLEG---AQKTLLLANEKVEEFT 1281
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.130 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,075,424
Number of Sequences: 37866
Number of extensions: 260601
Number of successful extensions: 2145
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 1935
Number of HSP's gapped (non-prelim): 352
length of query: 237
length of database: 18,247,518
effective HSP length: 99
effective length of query: 138
effective length of database: 14,498,784
effective search space: 2000832192
effective search space used: 2000832192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.