Guide to the Human Genome
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Search of human proteins with 153945782

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|153945782 natural cytotoxicity triggering receptor 2 [Homo
sapiens]
         (276 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|153945782 natural cytotoxicity triggering receptor 2 [Homo sa...   568   e-162
gi|37700254 triggering receptor expressed on myeloid cells-like ...   127   8e-30
gi|56550061 leukocyte membrane antigen [Homo sapiens]                  74   1e-13
gi|31324530 CD300e molecule [Homo sapiens]                             64   1e-10
gi|5729776 CD300C antigen [Homo sapiens]                               64   1e-10
gi|170932501 triggering receptor expressed on myeloid cells-like...    63   3e-10
gi|31377806 polymeric immunoglobulin receptor precursor [Homo sa...    62   5e-10
gi|169646348 CD300 molecule-like family member d [Homo sapiens]        62   5e-10
gi|9507203 triggering receptor expressed on myeloid cells 2 prec...    58   1e-08
gi|8924262 triggering receptor expressed on myeloid cells 1 [Hom...    53   3e-07
gi|154759271 CD300 molecule-like family member b [Homo sapiens]        52   4e-07
gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Hom...    49   5e-06
gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens]       49   5e-06
gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens]       49   5e-06
gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens]       49   5e-06
gi|30794266 triggering receptor expressed on myeloid cells-like ...    49   6e-06
gi|38455398 NK inhibitory receptor precursor [Homo sapiens]            48   8e-06
gi|49574534 T cell immunoglobulin mucin 3 [Homo sapiens]               45   7e-05
gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom...    45   7e-05
gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom...    45   7e-05
gi|22902134 CD8 antigen alpha polypeptide isoform 1 precursor [H...    43   3e-04
gi|27886642 CD8 antigen alpha polypeptide isoform 2 precursor [H...    43   3e-04
gi|225007536 CD8 antigen alpha polypeptide isoform 1 precursor [...    43   3e-04
gi|21687218 CD300 molecule-like family member g [Homo sapiens]         43   3e-04
gi|226529863 T-cell immunoglobulin and mucin domain containing 4...    41   0.001
gi|226498466 T-cell immunoglobulin and mucin domain containing 4...    39   0.005
gi|68800350 interleukin-1 receptor-associated kinase 1 isoform 3...    38   0.008
gi|68800343 interleukin-1 receptor-associated kinase 1 isoform 2...    38   0.008
gi|68800243 interleukin-1 receptor-associated kinase 1 isoform 1...    38   0.008
gi|51242941 G6f protein [Homo sapiens]                                 38   0.008

>gi|153945782 natural cytotoxicity triggering receptor 2 [Homo
           sapiens]
          Length = 276

 Score =  568 bits (1465), Expect = e-162
 Identities = 276/276 (100%), Positives = 276/276 (100%)

Query: 1   MAWRALHPLLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASA 60
           MAWRALHPLLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASA
Sbjct: 1   MAWRALHPLLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASA 60

Query: 61  LVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVS 120
           LVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVS
Sbjct: 61  LVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVS 120

Query: 121 KSVRFYLVVSPASASTQTSWTPRDLVSSQTQTQSCVPPTAGARQAPESPSTIPVPSQPQN 180
           KSVRFYLVVSPASASTQTSWTPRDLVSSQTQTQSCVPPTAGARQAPESPSTIPVPSQPQN
Sbjct: 121 KSVRFYLVVSPASASTQTSWTPRDLVSSQTQTQSCVPPTAGARQAPESPSTIPVPSQPQN 180

Query: 181 STLRPGPAAPIALVPVFCGLLVAKSLVLSALLVWWGDIWWKTMMELRSLDTQKATCHLQQ 240
           STLRPGPAAPIALVPVFCGLLVAKSLVLSALLVWWGDIWWKTMMELRSLDTQKATCHLQQ
Sbjct: 181 STLRPGPAAPIALVPVFCGLLVAKSLVLSALLVWWGDIWWKTMMELRSLDTQKATCHLQQ 240

Query: 241 VTDLPWTSVSSPVEREILYHTVARTKISDDDDEHTL 276
           VTDLPWTSVSSPVEREILYHTVARTKISDDDDEHTL
Sbjct: 241 VTDLPWTSVSSPVEREILYHTVARTKISDDDDEHTL 276


>gi|37700254 triggering receptor expressed on myeloid cells-like 4
           [Homo sapiens]
          Length = 200

 Score =  127 bits (320), Expect = 8e-30
 Identities = 81/212 (38%), Positives = 102/212 (48%), Gaps = 16/212 (7%)

Query: 1   MAWRALHPLLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASA 60
           MAW  +H     L         +  + L    GQTL ++CQY P    Y+ K WC++ S 
Sbjct: 1   MAWGGVHTCCFHLCCCCSWPQGAVPEELHKHPGQTLLLQCQYSPKRGPYQPKSWCQQTSP 60

Query: 61  LVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVS 120
             C  LVTSSKP T    S +TIWD P+AGFF +TM  L + DSG YWC IY  S+N ++
Sbjct: 61  SRCTLLVTSSKPWTAVQKSHYTIWDKPNAGFFNITMIQLTQNDSGFYWCGIYNASENIIT 120

Query: 121 KSVRFYLVVSPASASTQTSWTPRDLVSSQTQTQSCVPPTAGARQAPESPSTIPVPSQPQN 180
                 LVVSPA  +T   WT   L +S     S           PE  S  P  +  + 
Sbjct: 121 VLRNISLVVSPA-PTTSPMWTLPWLPTSTVLITS-----------PEGTSGHPSINGSET 168

Query: 181 STLRP----GPAAPIALVPVFCGLLVAKSLVL 208
              R     G   P  LV V CGLL+AK L+L
Sbjct: 169 RKSRAPACLGSGGPRFLVLVLCGLLLAKGLML 200


>gi|56550061 leukocyte membrane antigen [Homo sapiens]
          Length = 299

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 82/268 (30%), Positives = 113/268 (42%), Gaps = 24/268 (8%)

Query: 8   PLLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLV 67
           P  LLLL  PG  A SK + +    G +L+V+C Y        K  WC+     +C ++V
Sbjct: 4   PWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKY-WCRPPQIFLCDKIV 62

Query: 68  TSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRP-SDNSVSKSVRFY 126
             +K        R +I D P    FTVT+ +L EED+G YWC +  P   +     V   
Sbjct: 63  -ETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEVE 121

Query: 127 LVVSPASASTQTSWTPRDLVSSQTQT-QSCVPP----TAGARQAPESPSTIPVPSQPQNS 181
           + V PAS    TS TP  + +++T T  +  PP    T  A  A  S S      +  NS
Sbjct: 122 VSVFPAS----TSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNS 177

Query: 182 TLRPGPAAPIALVPVFCGLLVAKSLVLSALLVWWGDIWWKTMMELRSLDTQKAT---CHL 238
            L       ++L+ +   LLV  SL+   +   W  I      EL     Q AT    H 
Sbjct: 178 QL----PLLLSLLALLLLLLVGASLLAWRMFQKW--IKAGDHSELSQNPKQAATQSELHY 231

Query: 239 QQVTDLPWTSVSSPV---EREILYHTVA 263
             +  L W     P    E E+ Y TVA
Sbjct: 232 ANLELLMWPLQEKPAPPREVEVEYSTVA 259


>gi|31324530 CD300e molecule [Homo sapiens]
          Length = 205

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 1/101 (0%)

Query: 11  LLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSS 70
           LLLL   G  + +    +   AG +LTV CQY      Y K  WC+      C  +V + 
Sbjct: 7   LLLLCLSGCLSLTGPGSVTGTAGDSLTVWCQYESMYKGYNKY-WCRGQYDTSCESIVETK 65

Query: 71  KPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRI 111
               +    R +I D P+A  FTVTM +L E+D+G YWC+I
Sbjct: 66  GEEKVERNGRVSIRDHPEALAFTVTMQNLNEDDAGSYWCKI 106


>gi|5729776 CD300C antigen [Homo sapiens]
          Length = 224

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 3/174 (1%)

Query: 2   AWRALHPLLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASAL 61
           AW +     LLLLL PG    S    +    G +L+V+C+Y        K  WC+    L
Sbjct: 5   AWASWRSSALLLLLVPGYFPLSHPMTVAGPVGGSLSVQCRYEKEHRTLNKF-WCRPPQIL 63

Query: 62  VCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSK 121
            C ++V  +K        R +I D P    FTVT+ +L EED+G YWC +  P       
Sbjct: 64  RCDKIV-ETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHD 122

Query: 122 SVRFYLVVSPASASTQTSWTPRDLVSSQTQTQSCVPPTAGARQAPESPSTIPVP 175
            +   + VS   A T T+ +P+  + +          T  +    +SP   P P
Sbjct: 123 PI-VEVEVSVFPAGTTTASSPQSSMGTSGPPTKLPVHTWPSVTRKDSPEPSPHP 175


>gi|170932501 triggering receptor expressed on myeloid cells-like 2
           [Homo sapiens]
          Length = 321

 Score = 62.8 bits (151), Expect = 3e-10
 Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 21/173 (12%)

Query: 10  LLLLLLFP-----GSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCI 64
           LLLLLL+P     G  A S    ++ + G+TL+V+C Y    +  E K WCK       I
Sbjct: 6   LLLLLLWPQGCVSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCK-------I 58

Query: 65  RLVTSSKPRTMAWTS--RFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKS 122
           R           W    R+ + DD  A    +TM  L+ +DSG YWC   R +   +   
Sbjct: 59  RKKKCEPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWC--MRNTSGILYPL 116

Query: 123 VRFYLVVSPASASTQT-SWTPRDLVSSQTQTQSCVPPTAGARQAPESPSTIPV 174
           + F L VSPA  + +   +T  D +       +   PT+G    P++P T  V
Sbjct: 117 MGFQLDVSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSG----PDAPFTTGV 165


>gi|31377806 polymeric immunoglobulin receptor precursor [Homo
           sapiens]
          Length = 764

 Score = 62.0 bits (149), Expect = 5e-10
 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 4/108 (3%)

Query: 6   LHPLLLLLLLFPGSQAQSKA---QVLQSVAGQTLTVRCQYPPTG-SLYEKKGWCKEASAL 61
           L  L  LL +FP    +S     + + SV G ++++ C YPPT  + + +K WC++ +  
Sbjct: 3   LFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARG 62

Query: 62  VCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWC 109
            CI L++S    +  +  R  + + P+ G F V +  L ++DSG Y C
Sbjct: 63  GCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKC 110



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 27  VLQSVAGQTLTVRCQYPPTGSLYEKKGWC--KEASALVCIRLVTSSKPRTMAWTSRFTIW 84
           V++ VAG ++ V C Y    S    K WC  + A    C  LV S       +  R ++ 
Sbjct: 358 VVKGVAGGSVAVLCPYNRKESK-SIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLL 416

Query: 85  DDPDAGFFTVTMTDLREEDSGHYWC 109
           ++P  G FTV +  L   D+G YWC
Sbjct: 417 EEPGNGTFTVILNQLTSRDAGFYWC 441



 Score = 36.6 bits (83), Expect = 0.025
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 7/82 (8%)

Query: 30  SVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDA 89
           +V G+TL V C +P   S YEK  WCK  +   C  L +  +  + A+ +      D ++
Sbjct: 472 AVLGETLKVPCHFPCKFSSYEKY-WCKWNNT-GCQALPSQDEGPSKAFVN-----CDENS 524

Query: 90  GFFTVTMTDLREEDSGHYWCRI 111
              ++T+  +   D G YWC +
Sbjct: 525 RLVSLTLNLVTRADEGWYWCGV 546



 Score = 36.2 bits (82), Expect = 0.032
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 55  CKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWC 109
           C+++S   C  +V +   R  A+  R  +      G F+V +T LR+ED+G Y C
Sbjct: 271 CRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLC 325


>gi|169646348 CD300 molecule-like family member d [Homo sapiens]
          Length = 194

 Score = 62.0 bits (149), Expect = 5e-10
 Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 18/165 (10%)

Query: 11  LLLLLFPGSQAQSKAQVLQSVAGQ---TLTVRCQYPPTGSLYEKKGW-CKEASALVCIRL 66
           LLLL+ PG    +K     +V G    +LTV+C Y      Y K  W C+ A    C  L
Sbjct: 7   LLLLILPGYSIAAKITGPTTVNGSEQGSLTVQCAYGSGWETYLK--WRCQGADWNYCNIL 64

Query: 67  VTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFY 126
           V ++        +R +I D+     FTVTM +L+ +D+  YWC   RP    +   V+  
Sbjct: 65  VKTNGSEQEVKKNRVSIRDNQKNHVFTVTMENLKRDDADSYWCGTERP---GIDLGVKVQ 121

Query: 127 LVVSPASASTQTSWTPRDLVSSQTQTQSCVPPTAGARQAPESPST 171
           + ++P    TQT+      VS  T T + +  TA A Q   SP T
Sbjct: 122 VTINP---GTQTA------VSEWTTTTASLAFTAAATQKTSSPLT 157


>gi|9507203 triggering receptor expressed on myeloid cells 2
           precursor [Homo sapiens]
          Length = 230

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 6   LHPLLLLLLLFPGSQAQS-KAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASAL-VC 63
           + PL LL+LLF    + +    V Q VAGQ+L V C Y        +K WC++      C
Sbjct: 1   MEPLRLLILLFVTELSGAHNTTVFQGVAGQSLQVSCPYDSMKHWGRRKAWCRQLGEKGPC 60

Query: 64  IRLVTSSKPRTMA----WTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSV 119
            R+V++     ++    W     I DD   G  T+T+ +L+  D+G Y C+    S+   
Sbjct: 61  QRVVSTHNLWLLSFLRRWNGSTAITDDTLGGTLTITLRNLQPHDAGLYQCQSLHGSEADT 120

Query: 120 SKSVRFYLVVSP 131
            + V   ++  P
Sbjct: 121 LRKVLVEVLADP 132


>gi|8924262 triggering receptor expressed on myeloid cells 1 [Homo
           sapiens]
          Length = 234

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 58/199 (29%), Positives = 72/199 (36%), Gaps = 28/199 (14%)

Query: 33  GQTLTVRCQYPPTGSLYEKKGWC-----KEASALVCIRLVTSSKPRTMAWTSRFTIWDDP 87
           GQTL V+C Y        +K W      +    L C      SK        R  + D  
Sbjct: 34  GQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTE--RPSKNSHPVQVGRIILEDYH 91

Query: 88  DAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFYLVVSPASASTQTSWTPRDLVS 147
           D G   V M +L+ EDSG Y C IY+P         R  LVV+   + T  S        
Sbjct: 92  DHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTKGFSGTPGS------NE 145

Query: 148 SQTQTQSCVPPTAGARQAPESPSTIPVPSQPQNST---------LRPGPAAPIALVPVF- 197
           + TQ    +PPT      P   S   V   P  ST         +       I  VPVF 
Sbjct: 146 NSTQNVYKIPPTTTKALCPLYTSPRTVTQAPPKSTADVSTPDSEINLTNVTDIIRVPVFN 205

Query: 198 -----CGLLVAKSLVLSAL 211
                 G  ++KSLV S L
Sbjct: 206 IVILLAGGFLSKSLVFSVL 224


>gi|154759271 CD300 molecule-like family member b [Homo sapiens]
          Length = 238

 Score = 52.4 bits (124), Expect = 4e-07
 Identities = 42/137 (30%), Positives = 59/137 (43%), Gaps = 5/137 (3%)

Query: 6   LHPLLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIR 65
           L P LLLL L      Q    V     G +LTV+C Y      Y K  WC+      C  
Sbjct: 40  LPPALLLLSLSGCFSIQGPESVRAPEQG-SLTVQCHYKQGWETYIK-WWCRGVRWDTCKI 97

Query: 66  LVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRF 125
           L+ +        + R +I D+     FTVTM  LR +D+  YWC I R          + 
Sbjct: 98  LIETRGSEQGEKSDRVSIKDNQKDRTFTVTMEGLRRDDADVYWCGIER---RGPDLGTQV 154

Query: 126 YLVVSPASASTQTSWTP 142
            ++V P  A++ T+ +P
Sbjct: 155 KVIVDPEGAASTTASSP 171


>gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Homo
           sapiens]
          Length = 552

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 5/129 (3%)

Query: 16  FPGSQAQSKAQVLQSVAGQTLTVRCQYPPTG-SLYEKKGWCKEASAL-VCIRLVTSSKPR 73
           F    +   ++++    G  +T++C Y P+  + +++K WC+      +C  +V++++  
Sbjct: 78  FAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYT 137

Query: 74  TMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFYLVVSPAS 133
              +  R  + D P  G F V ++ L  +D G Y C I   S+N++   +   L +S   
Sbjct: 138 HHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI--GSENNM-LFLSMNLTISAGP 194

Query: 134 ASTQTSWTP 142
           AST  + TP
Sbjct: 195 ASTLPTATP 203


>gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens]
          Length = 328

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 14  LLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPR 73
           L FPG    S    +    G++L+V+C+Y      + K  WC++    +   +V +    
Sbjct: 144 LCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKY-WCRQPCLPIWHEMVETGGSE 202

Query: 74  TMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRI 111
            +  + +  I D P    FTVT+ +L  +D+G Y C I
Sbjct: 203 GVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGI 240


>gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens]
          Length = 259

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 14  LLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPR 73
           L FPG    S    +    G++L+V+C+Y      + K  WC++    +   +V +    
Sbjct: 75  LCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKY-WCRQPCLPIWHEMVETGGSE 133

Query: 74  TMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRI 111
            +  + +  I D P    FTVT+ +L  +D+G Y C I
Sbjct: 134 GVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGI 171


>gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens]
          Length = 328

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 14  LLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPR 73
           L FPG    S    +    G++L+V+C+Y      + K  WC++    +   +V +    
Sbjct: 144 LCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKY-WCRQPCLPIWHEMVETGGSE 202

Query: 74  TMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRI 111
            +  + +  I D P    FTVT+ +L  +D+G Y C I
Sbjct: 203 GVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGI 240


>gi|30794266 triggering receptor expressed on myeloid cells-like 1
           [Homo sapiens]
          Length = 311

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 9   LLLLLLLFPGSQAQ----SKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCI 64
           L LLLLL  G + Q    S  +VLQ+  G ++ V+C Y     +  +K WC+      C 
Sbjct: 3   LTLLLLLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHYR-LQDVKAQKVWCRFLPE-GCQ 60

Query: 65  RLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRI 111
            LV+S+  R  A   R T   D   G   V M  L+EED+G Y C +
Sbjct: 61  PLVSSAVDRR-APAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMV 106


>gi|38455398 NK inhibitory receptor precursor [Homo sapiens]
          Length = 290

 Score = 48.1 bits (113), Expect = 8e-06
 Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 8/139 (5%)

Query: 9   LLLLLLLFPGSQAQSKAQV-----LQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVC 63
           L L LLLF  S      Q+     +  +   +LTV+C Y      Y  K WC+ A    C
Sbjct: 4   LTLYLLLFWLSGYSIVTQITGPTTVNGLERGSLTVQCVYRSGWETY-LKWWCRGAIWRDC 62

Query: 64  IRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSV 123
             LV +S         R +I D+     FTVTM DL + D+  YWC I + + N +  +V
Sbjct: 63  KILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEK-TGNDLGVTV 121

Query: 124 RFYLVVSPASASTQTSWTP 142
           +  +  +P +   +TS +P
Sbjct: 122 QVTIDPAPVT-QEETSSSP 139


>gi|49574534 T cell immunoglobulin mucin 3 [Homo sapiens]
          Length = 301

 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 23/165 (13%)

Query: 9   LLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPT--GSLYEKKGWCKEASALV-CIR 65
           LLLLLLL   S+ + +A+V     GQ   + C Y P   G+L     W K A  +  C  
Sbjct: 12  LLLLLLLTRSSEVEYRAEV-----GQNAYLPCFYTPAAPGNLVPVC-WGKGACPVFECGN 65

Query: 66  LVTSSKPRTMA-WTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVR 124
           +V  +  R +  WTSR+ +  D   G  ++T+ ++   DSG Y CRI  P   +  K   
Sbjct: 66  VVLRTDERDVNYWTSRYWLNGDFRKGDVSLTIENVTLADSGIYCCRIQIPGIMNDEK-FN 124

Query: 125 FYLVVSPASASTQ-------TSWTPRDLVS-----SQTQTQSCVP 157
             LV+ PA  +         T+  PR L +     ++TQT   +P
Sbjct: 125 LKLVIKPAKVTPAPTRQRDFTAAFPRMLTTRGHGPAETQTLGSLP 169


>gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
           sapiens]
          Length = 265

 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 2/98 (2%)

Query: 16  FPGSQAQSKAQVLQSVAGQTLTVRCQYPPTG-SLYEKKGWCKEASAL-VCIRLVTSSKPR 73
           F    +   ++++    G  +T++C Y P+  + +++K WC+      +C  +V++++  
Sbjct: 103 FAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYT 162

Query: 74  TMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRI 111
              +  R  + D P  G F V ++ L  +D G Y C I
Sbjct: 163 HHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200


>gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
           sapiens]
          Length = 265

 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 2/98 (2%)

Query: 16  FPGSQAQSKAQVLQSVAGQTLTVRCQYPPTG-SLYEKKGWCKEASAL-VCIRLVTSSKPR 73
           F    +   ++++    G  +T++C Y P+  + +++K WC+      +C  +V++++  
Sbjct: 103 FAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYT 162

Query: 74  TMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRI 111
              +  R  + D P  G F V ++ L  +D G Y C I
Sbjct: 163 HHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200


>gi|22902134 CD8 antigen alpha polypeptide isoform 1 precursor [Homo
           sapiens]
          Length = 235

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 18/167 (10%)

Query: 9   LLLLLLLFPGSQAQSKAQVLQSV--AGQTLTVRCQY----PPTGS--LYEKKGWCKEASA 60
           L L LLL     +Q +   L      G+T+ ++CQ     P +G   L++ +G    A++
Sbjct: 10  LPLALLLHAARPSQFRVSPLDRTWNLGETVELKCQVLLSNPTSGCSWLFQPRG---AAAS 66

Query: 61  LVCIRLVTSSKPRTMAW--TSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNS 118
              +  ++ +KP+      T RF+     D   F +T++D R E+ G+Y+C     S   
Sbjct: 67  PTFLLYLSQNKPKAAEGLDTQRFSGKRLGDT--FVLTLSDFRRENEGYYFCSALSNSIMY 124

Query: 119 VSKSVRFYLVVSPASASTQTSWTPRDLVSSQ---TQTQSCVPPTAGA 162
            S  V  +L   P +       TP   ++SQ    + ++C P   GA
Sbjct: 125 FSHFVPVFLPAKPTTTPAPRPPTPAPTIASQPLSLRPEACRPAAGGA 171


>gi|27886642 CD8 antigen alpha polypeptide isoform 2 precursor [Homo
           sapiens]
          Length = 198

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 18/167 (10%)

Query: 9   LLLLLLLFPGSQAQSKAQVLQSV--AGQTLTVRCQY----PPTGS--LYEKKGWCKEASA 60
           L L LLL     +Q +   L      G+T+ ++CQ     P +G   L++ +G    A++
Sbjct: 10  LPLALLLHAARPSQFRVSPLDRTWNLGETVELKCQVLLSNPTSGCSWLFQPRG---AAAS 66

Query: 61  LVCIRLVTSSKPRTMAW--TSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNS 118
              +  ++ +KP+      T RF+     D   F +T++D R E+ G+Y+C     S   
Sbjct: 67  PTFLLYLSQNKPKAAEGLDTQRFSGKRLGDT--FVLTLSDFRRENEGYYFCSALSNSIMY 124

Query: 119 VSKSVRFYLVVSPASASTQTSWTPRDLVSSQ---TQTQSCVPPTAGA 162
            S  V  +L   P +       TP   ++SQ    + ++C P   GA
Sbjct: 125 FSHFVPVFLPAKPTTTPAPRPPTPAPTIASQPLSLRPEACRPAAGGA 171


>gi|225007536 CD8 antigen alpha polypeptide isoform 1 precursor
           [Homo sapiens]
          Length = 235

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 18/167 (10%)

Query: 9   LLLLLLLFPGSQAQSKAQVLQSV--AGQTLTVRCQY----PPTGS--LYEKKGWCKEASA 60
           L L LLL     +Q +   L      G+T+ ++CQ     P +G   L++ +G    A++
Sbjct: 10  LPLALLLHAARPSQFRVSPLDRTWNLGETVELKCQVLLSNPTSGCSWLFQPRG---AAAS 66

Query: 61  LVCIRLVTSSKPRTMAW--TSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNS 118
              +  ++ +KP+      T RF+     D   F +T++D R E+ G+Y+C     S   
Sbjct: 67  PTFLLYLSQNKPKAAEGLDTQRFSGKRLGDT--FVLTLSDFRRENEGYYFCSALSNSIMY 124

Query: 119 VSKSVRFYLVVSPASASTQTSWTPRDLVSSQ---TQTQSCVPPTAGA 162
            S  V  +L   P +       TP   ++SQ    + ++C P   GA
Sbjct: 125 FSHFVPVFLPAKPTTTPAPRPPTPAPTIASQPLSLRPEACRPAAGGA 171


>gi|21687218 CD300 molecule-like family member g [Homo sapiens]
          Length = 332

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 6/108 (5%)

Query: 9   LLLLL---LLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALV--C 63
           LL+LL   LL PG +A    + +    G T++++C Y      + +K WC++   L   C
Sbjct: 3   LLVLLWGCLLLPGYEALEGPEEISGFEGDTVSLQCTYREELRDH-RKYWCRKGGILFSRC 61

Query: 64  IRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRI 111
              + + +        R +I D        VT+ +L  +D+G YWC +
Sbjct: 62  SGTIYAEEEGQETMKGRVSIRDSRQELSLIVTLWNLTLQDAGEYWCGV 109


>gi|226529863 T-cell immunoglobulin and mucin domain containing 4
           isoform 1 [Homo sapiens]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 63/246 (25%), Positives = 90/246 (36%), Gaps = 32/246 (13%)

Query: 27  VLQSVAGQTLTVRCQYPPTGSLYEKKGW---------CKEASALVCIRLVTSSKPRTMAW 77
           V+  V G  +T+ C Y           W         CKEA        VTS K      
Sbjct: 27  VVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCPYSGCKEALIRTDGMRVTSRK------ 80

Query: 78  TSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPS-DNSVSKSVRFYLV-VSPASAS 135
           ++++ +      G  ++T+ +  E DSG Y CRI  P   N V  +VR  L   S  +  
Sbjct: 81  SAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWFNDVKINVRLNLQRASTTTHR 140

Query: 136 TQTSWTPRDLVSSQTQTQSCVPPTAGARQAPESPSTIPVPSQPQNSTLRPGPAA------ 189
           T T+ T R   +S T T+      A       +   +   +  Q +T+     A      
Sbjct: 141 TATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTTGTPLQMTTIAVFTTANTCLSL 200

Query: 190 -PIALVPVFCGLLVAKS------LVLSALLVWWGDIWWKTMMELRSLDTQKATCHLQQVT 242
            P  L     GLL  +       L   +  V   D W  + +E  S DT   T    +V 
Sbjct: 201 TPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSW--SSVESTSADTVLLTSKESKVW 258

Query: 243 DLPWTS 248
           DLP TS
Sbjct: 259 DLPSTS 264


>gi|226498466 T-cell immunoglobulin and mucin domain containing 4
           isoform 2 [Homo sapiens]
          Length = 350

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 29/180 (16%)

Query: 27  VLQSVAGQTLTVRCQYPPTGSLYEKKGW---------CKEASALVCIRLVTSSKPRTMAW 77
           V+  V G  +T+ C Y           W         CKEA        VTS K      
Sbjct: 27  VVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCPYSGCKEALIRTDGMRVTSRK------ 80

Query: 78  TSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPS-DNSVSKSVRFYLV-VSPASAS 135
           ++++ +      G  ++T+ +  E DSG Y CRI  P   N V  +VR  L   S  +  
Sbjct: 81  SAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWFNDVKINVRLNLQRASTTTHR 140

Query: 136 TQTSWTPRDLVSSQTQTQSCVPPTAGARQAPESPSTIP--VPSQPQNSTLRPGPAAPIAL 193
           T T+ T R   +S T T          RQ   +P+ +P  V + P  +T  P     IA+
Sbjct: 141 TATTTTRRTTTTSPTTT----------RQMTTTPAALPTTVVTTPDLTTGTPLQMTTIAV 190


>gi|68800350 interleukin-1 receptor-associated kinase 1 isoform 3
           [Homo sapiens]
          Length = 633

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 27/241 (11%)

Query: 38  VRCQYPPTGSLYEKKGWCKEASALVC----IRLVTSSKPRTMA----WTSRFTIWDDPDA 89
           V C++       E   WC+ A+ +V     +RL   S  RT +    W +R       D 
Sbjct: 26  VMCRFYKVMDALEPADWCQFAALIVRDQTELRLCERSGQRTASVLWPWINRNA--RVADL 83

Query: 90  GFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFYLVVSPASASTQTSWTPRDLVSSQ 149
                 +  LR  D    W     P  +  + + R   + +PA A    +W+PR L SS 
Sbjct: 84  VHILTHLQLLRARDIITAW-HPPAPLPSPGTTAPRPSSIPAPAEAE---AWSPRKLPSSA 139

Query: 150 TQTQSCVPPTAGARQAPE-----SPSTI-PVPSQPQNSTLRPGPAAPIALVP-----VFC 198
           +   S   P +     PE     SP+++ P P  P  S+ +PGP + ++L+       FC
Sbjct: 140 STFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFC 199

Query: 199 GLL--VAKSLVLSALLVWWGDIWWKTMMELRSLDTQKATCHLQQVTDLPWTSVSSPVERE 256
             L  +++     +  +  G+  +  +      +T  A   L++  DL WT+V      E
Sbjct: 200 WPLCEISRGTHNFSEELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTE 259

Query: 257 I 257
           +
Sbjct: 260 V 260


>gi|68800343 interleukin-1 receptor-associated kinase 1 isoform 2
           [Homo sapiens]
          Length = 682

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 27/241 (11%)

Query: 38  VRCQYPPTGSLYEKKGWCKEASALVC----IRLVTSSKPRTMA----WTSRFTIWDDPDA 89
           V C++       E   WC+ A+ +V     +RL   S  RT +    W +R       D 
Sbjct: 26  VMCRFYKVMDALEPADWCQFAALIVRDQTELRLCERSGQRTASVLWPWINRNA--RVADL 83

Query: 90  GFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFYLVVSPASASTQTSWTPRDLVSSQ 149
                 +  LR  D    W     P  +  + + R   + +PA A    +W+PR L SS 
Sbjct: 84  VHILTHLQLLRARDIITAW-HPPAPLPSPGTTAPRPSSIPAPAEAE---AWSPRKLPSSA 139

Query: 150 TQTQSCVPPTAGARQAPE-----SPSTI-PVPSQPQNSTLRPGPAAPIALVP-----VFC 198
           +   S   P +     PE     SP+++ P P  P  S+ +PGP + ++L+       FC
Sbjct: 140 STFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFC 199

Query: 199 GLL--VAKSLVLSALLVWWGDIWWKTMMELRSLDTQKATCHLQQVTDLPWTSVSSPVERE 256
             L  +++     +  +  G+  +  +      +T  A   L++  DL WT+V      E
Sbjct: 200 WPLCEISRGTHNFSEELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTE 259

Query: 257 I 257
           +
Sbjct: 260 V 260


>gi|68800243 interleukin-1 receptor-associated kinase 1 isoform 1
           [Homo sapiens]
          Length = 712

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 27/241 (11%)

Query: 38  VRCQYPPTGSLYEKKGWCKEASALVC----IRLVTSSKPRTMA----WTSRFTIWDDPDA 89
           V C++       E   WC+ A+ +V     +RL   S  RT +    W +R       D 
Sbjct: 26  VMCRFYKVMDALEPADWCQFAALIVRDQTELRLCERSGQRTASVLWPWINRNA--RVADL 83

Query: 90  GFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFYLVVSPASASTQTSWTPRDLVSSQ 149
                 +  LR  D    W     P  +  + + R   + +PA A    +W+PR L SS 
Sbjct: 84  VHILTHLQLLRARDIITAW-HPPAPLPSPGTTAPRPSSIPAPAEAE---AWSPRKLPSSA 139

Query: 150 TQTQSCVPPTAGARQAPE-----SPSTI-PVPSQPQNSTLRPGPAAPIALVP-----VFC 198
           +   S   P +     PE     SP+++ P P  P  S+ +PGP + ++L+       FC
Sbjct: 140 STFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFC 199

Query: 199 GLL--VAKSLVLSALLVWWGDIWWKTMMELRSLDTQKATCHLQQVTDLPWTSVSSPVERE 256
             L  +++     +  +  G+  +  +      +T  A   L++  DL WT+V      E
Sbjct: 200 WPLCEISRGTHNFSEELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTE 259

Query: 257 I 257
           +
Sbjct: 260 V 260


>gi|51242941 G6f protein [Homo sapiens]
          Length = 297

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 12/138 (8%)

Query: 9   LLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVT 68
           L LLL L    QA    Q +    G+ + + C  PPT    E   W    +A     LV 
Sbjct: 4   LFLLLFLCGTPQAADNMQAIYVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTTLVA 63

Query: 69  SSK-------PRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSK 121
             +       P      SR  +      G +++ +   +EED+G YWC +     N  + 
Sbjct: 64  QVQVGRPAPDPGKPGRESRLRL-----LGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNW 118

Query: 122 SVRFYLVVSPASASTQTS 139
            V   LV+  +  S + +
Sbjct: 119 RVYDVLVLKGSQLSARAA 136


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.129    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,761,074
Number of Sequences: 37866
Number of extensions: 558582
Number of successful extensions: 4379
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 183
Number of HSP's that attempted gapping in prelim test: 3949
Number of HSP's gapped (non-prelim): 581
length of query: 276
length of database: 18,247,518
effective HSP length: 101
effective length of query: 175
effective length of database: 14,423,052
effective search space: 2524034100
effective search space used: 2524034100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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