Guide to the Human Genome
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Name: CYP11A1 Sequence: fasta or formatted (363aa) NCBI GI: 153218654
Description:

cytochrome P450, family 11, subfamily A, polypeptide 1 isoform b

Referenced in:

Steroid Hormones

Other entries for this name:
alt prot [521aa] cytochrome P450, family 11, subfamily A, polypeptide 1 isoform a ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         24           2
 C cysteine            0.3          1           1
 D aspartate           6.1         22           2
 E glutamate           5.5         20           2
 F phenylalanine       6.9         25           3
 G glycine             4.7         17           2
 H histidine           2.5          9           2
 I isoleucine          5.8         21           1
 K lysine              4.4         16           2
 L leucine            11.3         41           2
 M methionine          4.1         15           1
 N asparagine          4.4         16           1
 P proline             4.1         15           2
 Q glutamine           4.7         17           2
 R arginine            6.6         24           2
 S serine              4.7         17           1
 T threonine           6.1         22           2
 V valine              6.3         23           2
 W tryptophan          1.9          7           1
 Y tyrosine            3.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 11, subfamily A, polypeptid... 
CYP11A1               1.000   cytochrome P450, family 11, subfamily A, polypeptid...
CYP11B2               0.323   cytochrome P450, family 11, subfamily B, polypeptid...
CYP11B1               0.309   cytochrome P450, family 11, subfamily B, polypeptide...
CYP27B1               0.220   cytochrome P450, family 27, subfamily B, polypeptide ...
CYP27A1               0.210   cytochrome P450, family 27, subfamily A, polypeptide ...
CYP11B1               0.207   cytochrome P450, family 11, subfamily B, polypeptide...
CYP27C1               0.196   cytochrome P450, family 27, subfamily C, polypeptid...
CYP24A1               0.196   cytochrome P450 family 24 subfamily A polypeptide 1 ...
CYP24A1               0.133   cytochrome P450 family 24 subfamily A polypeptide 1...
CYP3A4                0.106   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A5                0.102   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP4F8                0.096   cytochrome P450, family 4, subfamily F, polypeptide 8...
CYP3A43               0.094   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A7                0.094   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP4F12               0.093   cytochrome P450, family 4, subfamily F, polypeptide...
CYP3A43               0.090   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4F3                0.090   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4F2                0.089   cytochrome P450, family 4, subfamily F, polypeptide ...
CYP4F11               0.086   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4F11               0.086   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4V2                0.082   cytochrome P450, family 4, subfamily v, polypeptide...
CYP2J2                0.079   cytochrome P450, family 2, subfamily J, polypeptide ...
CYP1B1                0.073   cytochrome P450, family 1, subfamily B, polypeptide...
TBXAS1                0.072   thromboxane A synthase 1, platelet isoform TXS-I [H...
TBXAS1                0.072   thromboxane A synthase 1, platelet isoform TXS-I [H...
CYP4X1                0.071   cytochrome P450, family 4, subfamily X, polypeptide ...
CYP2C18               0.069   cytochrome P450 family 2 subfamily C polypeptide 18...
CYP2C18               0.069   cytochrome P450 family 2 subfamily C polypeptide 18 ...
CYP4Z1                0.069   cytochrome P450 4Z1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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