Guide to the Human Genome
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Name: CYP4F2 Sequence: fasta or formatted (520aa) NCBI GI: 13435391
Description:

cytochrome P450, family 4, subfamily F, polypeptide 2

Referenced in:

Arachidonate, Prostaglandins, and Leukotrienes
Cytochrome P450 Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         35           2
 C cysteine            2.1         11           1
 D aspartate           6.0         31           2
 E glutamate           6.0         31           2
 F phenylalanine       5.4         28           2
 G glycine             4.4         23           2
 H histidine           4.0         21           2
 I isoleucine          5.0         26           2
 K lysine              4.6         24           2
 L leucine            13.3         69           5
 M methionine          2.7         14           1
 N asparagine          1.9         10           1
 P proline             7.1         37           2
 Q glutamine           3.3         17           1
 R arginine            6.5         34           3
 S serine              6.5         34           1
 T threonine           3.7         19           2
 V valine              5.8         30           2
 W tryptophan          2.9         15           1
 Y tyrosine            2.1         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 4, subfamily F, polypeptide ... 
CYP4F11               0.879   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4F11               0.879   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4F3                0.870   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4F12               0.824   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4F8                0.822   cytochrome P450, family 4, subfamily F, polypeptide 8...
CYP4F22               0.643   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4A11               0.378   cytochrome P450, family 4, subfamily A, polypeptide...
CYP4B1                0.373   cytochrome P450, family 4, subfamily B, polypeptide...
CYP4X1                0.371   cytochrome P450, family 4, subfamily X, polypeptide ...
CYP4B1                0.370   cytochrome P450, family 4, subfamily B, polypeptide...
CYP4A22               0.358   cytochrome P450, family 4, subfamily A, polypeptide ...
CYP4Z1                0.343   cytochrome P450 4Z1 
CYP4V2                0.254   cytochrome P450, family 4, subfamily v, polypeptide...
LOC646575             0.230   PREDICTED: similar to cytochrome P450, family 4, su...
LOC646575             0.230   PREDICTED: similar to cytochrome P450, family 4, su...
LOC646575             0.230   PREDICTED: similar to cytochrome P450, family 4, su...
CYP3A7                0.119   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP3A43               0.114   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A4                0.111   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A43               0.110   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A5                0.108   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP46A1               0.103   cytochrome P450, family 46 
CYP27A1               0.082   cytochrome P450, family 27, subfamily A, polypeptide ...
TBXAS1                0.081   thromboxane A synthase 1, platelet isoform TXS-I [H...
TBXAS1                0.081   thromboxane A synthase 1, platelet isoform TXS-I [H...
CYP3A43               0.080   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP2U1                0.073   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP2R1                0.073   cytochrome P450, family 2, subfamily R, polypeptide ...
CYP24A1               0.071   cytochrome P450 family 24 subfamily A polypeptide 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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