Guide to the Human Genome
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Name: CYP4F8 Sequence: fasta or formatted (520aa) NCBI GI: 6005737
Description:

cytochrome P450, family 4, subfamily F, polypeptide 8

Referenced in:

Arachidonate, Prostaglandins, and Leukotrienes
Cytochrome P450 Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         32           2
 C cysteine            2.3         12           1
 D aspartate           6.0         31           2
 E glutamate           5.2         27           2
 F phenylalanine       5.8         30           2
 G glycine             4.6         24           2
 H histidine           3.1         16           2
 I isoleucine          5.6         29           2
 K lysine              4.8         25           1
 L leucine            12.9         67           4
 M methionine          1.9         10           1
 N asparagine          3.3         17           2
 P proline             6.5         34           2
 Q glutamine           3.5         18           1
 R arginine            7.7         40           3
 S serine              5.4         28           1
 T threonine           5.0         26           2
 V valine              5.8         30           2
 W tryptophan          2.5         13           1
 Y tyrosine            2.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 4, subfamily F, polypeptide 8... 
CYP4F2                0.825   cytochrome P450, family 4, subfamily F, polypeptide ...
CYP4F11               0.800   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4F11               0.800   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4F12               0.784   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4F3                0.769   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4F22               0.605   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4A11               0.371   cytochrome P450, family 4, subfamily A, polypeptide...
CYP4B1                0.366   cytochrome P450, family 4, subfamily B, polypeptide...
CYP4B1                0.362   cytochrome P450, family 4, subfamily B, polypeptide...
CYP4A22               0.349   cytochrome P450, family 4, subfamily A, polypeptide ...
CYP4X1                0.345   cytochrome P450, family 4, subfamily X, polypeptide ...
CYP4Z1                0.342   cytochrome P450 4Z1 
CYP4V2                0.250   cytochrome P450, family 4, subfamily v, polypeptide...
LOC646575             0.209   PREDICTED: similar to cytochrome P450, family 4, su...
LOC646575             0.209   PREDICTED: similar to cytochrome P450, family 4, su...
LOC646575             0.209   PREDICTED: similar to cytochrome P450, family 4, su...
CYP3A7                0.125   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP3A43               0.125   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A5                0.124   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A4                0.123   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A43               0.121   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP46A1               0.106   cytochrome P450, family 46 
TBXAS1                0.091   thromboxane A synthase 1, platelet isoform TXS-I [H...
TBXAS1                0.091   thromboxane A synthase 1, platelet isoform TXS-I [H...
CYP3A43               0.088   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP24A1               0.081   cytochrome P450 family 24 subfamily A polypeptide 1 ...
CYP27A1               0.076   cytochrome P450, family 27, subfamily A, polypeptide ...
CYP27B1               0.073   cytochrome P450, family 27, subfamily B, polypeptide ...
CYP2R1                0.071   cytochrome P450, family 2, subfamily R, polypeptide ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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