Guide to the Human Genome
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Name: STARD7 Sequence: fasta or formatted (370aa) NCBI GI: 151301035
Description:

START domain containing 7

Referenced in:

Additional Membrane Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         22           2
 C cysteine            0.8          3           1
 D aspartate           3.8         14           1
 E glutamate           8.6         32           3
 F phenylalanine       3.5         13           2
 G glycine             5.4         20           3
 H histidine           3.0         11           2
 I isoleucine          2.7         10           1
 K lysine              4.9         18           2
 L leucine             8.6         32           2
 M methionine          4.3         16           2
 N asparagine          3.0         11           2
 P proline             4.9         18           2
 Q glutamine           4.6         17           2
 R arginine            9.2         34           2
 S serine              8.1         30           2
 T threonine           3.8         14           1
 V valine              8.1         30           2
 W tryptophan          2.2          8           1
 Y tyrosine            4.6         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   START domain containing 7 
PCTP                  0.115   phosphatidylcholine transfer protein isoform 1 [Hom...
PCTP                  0.082   phosphatidylcholine transfer protein isoform 2 [Hom...
STARD10               0.037   START domain containing 10 
STARD8                0.023   StAR-related lipid transfer (START) domain containi...
STARD8                0.023   StAR-related lipid transfer (START) domain containi...
STARD8                0.023   StAR-related lipid transfer (START) domain containin...
STARD6                0.023   START domain containing protein 6 
COL4A3BP              0.023   alpha 3 type IV collagen binding protein isoform 2 [...
COL4A3BP              0.023   alpha 3 type IV collagen binding protein isoform 3 ...
COL4A3BP              0.023   alpha 3 type IV collagen binding protein isoform 1 [H...
STARD13               0.021   StAR-related lipid transfer (START) domain containin...
STARD13               0.021   StAR-related lipid transfer (START) domain containin...
STARD13               0.021   StAR-related lipid transfer (START) domain containin...
LOC283685             0.015   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283685             0.012   PREDICTED: golgi autoantigen, golgin subfamily a-li...
DLC1                  0.011   deleted in liver cancer 1 isoform 1 
DLC1                  0.011   deleted in liver cancer 1 isoform 2 
STARD4                0.011   StAR-related lipid transfer (START) domain containin...
ACOT12                0.011   acyl-CoA thioesterase 12 
KIAA1211              0.010   hypothetical protein LOC57482 
LOC400352             0.010   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.010   PREDICTED: similar to Putative golgin subfamily A m...
C19orf29              0.010   chromosome 19 open reading frame 29 
C19orf29              0.010   chromosome 19 open reading frame 29 
NOXA1                 0.010   NADPH oxidase activator 1 
XKR5                  0.008   XK-related protein 5a 
PARP4                 0.008   poly (ADP-ribose) polymerase family, member 4 [Homo...
DNAH6                 0.007   dynein, axonemal, heavy polypeptide 6 
HYDIN                 0.007   hydrocephalus inducing isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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