PCTP 5901

Name: PCTP	Sequence: fasta or formatted (214aa)		NCBI GI: 156151415
Description: phosphatidylcholine transfer protein isoform 1		Referenced in: Lipid Metabolism Additional Membrane Functions
Other entries for this name: alt prot [142aa] phosphatidylcholine transfer protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 14 2 C cysteine 1.9 4 1 D aspartate 6.1 13 1 E glutamate 7.5 16 2 F phenylalanine 3.3 7 1 G glycine 6.5 14 2 H histidine 0.5 1 1 I isoleucine 4.2 9 1 K lysine 7.5 16 2 L leucine 9.3 20 2 M methionine 3.3 7 1 N asparagine 3.3 7 1 P proline 3.7 8 1 Q glutamine 6.1 13 2 R arginine 5.1 11 2 S serine 6.5 14 1 T threonine 2.8 6 1 V valine 6.1 13 2 W tryptophan 2.8 6 1 Y tyrosine 7.0 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 phosphatidylcholine transfer protein isoform 1 [Hom... PCTP 0.656 phosphatidylcholine transfer protein isoform 2 [Hom... STARD7 0.200 START domain containing 7 STARD10 0.112 START domain containing 10 COL4A3BP 0.043 alpha 3 type IV collagen binding protein isoform 2 [... COL4A3BP 0.043 alpha 3 type IV collagen binding protein isoform 3 ... COL4A3BP 0.043 alpha 3 type IV collagen binding protein isoform 1 [H... YTHDC2 0.012 YTH domain containing 2 FGD5 0.012 FYVE, RhoGEF and PH domain containing 5 DNAH9 0.012 dynein, axonemal, heavy chain 9 isoform 2 NCAN 0.010 chondroitin sulfate proteoglycan 3 STARD4 0.010 StAR-related lipid transfer (START) domain containin... TRIM54 0.010 ring finger protein 30 isoform 1 PLEC1 0.007 plectin 1 isoform 11 PLEC1 0.007 plectin 1 isoform 10 PLEC1 0.007 plectin 1 isoform 8 PLEC1 0.007 plectin 1 isoform 7 PLEC1 0.007 plectin 1 isoform 6 PLEC1 0.007 plectin 1 isoform 3 PLEC1 0.007 plectin 1 isoform 2 PLEC1 0.007 plectin 1 isoform 1 LOC729950 0.007 PREDICTED: hypothetical protein LOC729950 0.005 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.