Guide to the Human Genome
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Name: COQ10B Sequence: fasta or formatted (238aa) NCBI GI: 13376737
Description:

coenzyme Q10 homolog B

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         16           2
 C cysteine            3.4          8           1
 D aspartate           2.5          6           1
 E glutamate           5.9         14           1
 F phenylalanine       5.0         12           2
 G glycine             5.5         13           1
 H histidine           3.8          9           2
 I isoleucine          4.6         11           1
 K lysine              5.9         14           2
 L leucine             9.7         23           2
 M methionine          2.5          6           1
 N asparagine          1.7          4           1
 P proline             5.9         14           2
 Q glutamine           1.7          4           1
 R arginine            8.8         21           2
 S serine              7.6         18           1
 T threonine           7.1         17           1
 V valine              7.1         17           2
 W tryptophan          0.8          2           1
 Y tyrosine            3.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coenzyme Q10 homolog B 
COQ10A                0.594   coenzyme Q10 homolog A isoform a 
COQ10A                0.585   coenzyme Q10 homolog A isoform b 
BTG2                  0.011   B-cell translocation gene 2 
LOC100288520          0.009   PREDICTED: hypothetical protein XP_002342486 
DNAI1                 0.006   dynein, axonemal, intermediate chain 1 
LOC728379             0.006   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC728373             0.006   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC728419             0.006   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728405             0.006   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728400             0.006   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728393             0.006   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
USP17L5               0.006   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
LOC728379             0.006   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728373             0.006   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728369             0.006   PREDICTED: similar to deubiquitinating enzyme 3 [Ho...
LOC100287513          0.006   PREDICTED: hypothetical protein XP_002342480 
LOC100287441          0.006   PREDICTED: hypothetical protein XP_002342478 
LOC100287404          0.006   PREDICTED: hypothetical protein XP_002342477 
LOC100287364          0.006   PREDICTED: hypothetical protein XP_002342476 
LOC100287327          0.006   PREDICTED: hypothetical protein XP_002342475 
LOC100287238          0.006   PREDICTED: hypothetical protein XP_002342474 
LOC100287178          0.006   PREDICTED: hypothetical protein XP_002342472 
USP17                 0.006   ubiquitin specific peptidase 17 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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