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Search of human proteins with 149999371
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149999371 hypothetical protein LOC91056 [Homo sapiens]
(821 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149999371 hypothetical protein LOC91056 [Homo sapiens] 1642 0.0
gi|226529806 histone deacetylase 10 isoform 2 [Homo sapiens] 33 1.4
gi|20070354 histone deacetylase 10 isoform 1 [Homo sapiens] 33 1.4
gi|113420249 PREDICTED: hypothetical protein LOC728071 [Homo sap... 32 1.8
gi|149193331 tripartite motif protein 15 [Homo sapiens] 32 1.8
gi|13124773 brain protein 16 [Homo sapiens] 32 1.8
gi|4826669 cadherin 15 preproprotein [Homo sapiens] 32 2.4
gi|239755004 PREDICTED: hypothetical protein [Homo sapiens] 32 3.1
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 32 3.1
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 32 3.1
gi|56549696 E1A binding protein p400 [Homo sapiens] 32 3.1
gi|208431824 forkhead box I3 [Homo sapiens] 32 3.1
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 32 3.1
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 31 4.1
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens] 31 5.3
gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens] 30 7.0
gi|11545912 nucleotide-binding oligomerization domain containing... 30 7.0
gi|239740955 PREDICTED: similar to c114 SLIT-like testicular pro... 30 9.1
gi|239740953 PREDICTED: similar to c114 SLIT-like testicular pro... 30 9.1
gi|13376146 zinc finger and BTB domain containing 3 [Homo sapiens] 30 9.1
gi|34101268 kelch-like 8 [Homo sapiens] 30 9.1
gi|116325993 c114 SLIT-like testicular protein [Homo sapiens] 30 9.1
gi|110665701 leucine rich repeat containing 37A [Homo sapiens] 30 9.1
>gi|149999371 hypothetical protein LOC91056 [Homo sapiens]
Length = 821
Score = 1642 bits (4252), Expect = 0.0
Identities = 821/821 (100%), Positives = 821/821 (100%)
Query: 1 MEYPAQLWPDASAAEVAATSLLDTLVLLPPRPSALRRPLLLAATTALAAGGALGPTSGAS 60
MEYPAQLWPDASAAEVAATSLLDTLVLLPPRPSALRRPLLLAATTALAAGGALGPTSGAS
Sbjct: 1 MEYPAQLWPDASAAEVAATSLLDTLVLLPPRPSALRRPLLLAATTALAAGGALGPTSGAS 60
Query: 61 CRLLPLLLGLAAGSDLGRGFVPASEQRPLQATACECLRELESCKPGLLGGSLGLLRGLLG 120
CRLLPLLLGLAAGSDLGRGFVPASEQRPLQATACECLRELESCKPGLLGGSLGLLRGLLG
Sbjct: 61 CRLLPLLLGLAAGSDLGRGFVPASEQRPLQATACECLRELESCKPGLLGGSLGLLRGLLG 120
Query: 121 QEGPVQPLSLLLALALRNTLVLQSRVGAGLGGLLTDKVSPTGGGPWDWTLVEEGDGRLQP 180
QEGPVQPLSLLLALALRNTLVLQSRVGAGLGGLLTDKVSPTGGGPWDWTLVEEGDGRLQP
Sbjct: 121 QEGPVQPLSLLLALALRNTLVLQSRVGAGLGGLLTDKVSPTGGGPWDWTLVEEGDGRLQP 180
Query: 181 QAPSWPAAEEGEGERSLTAREHSPEEARELRAAVIQLLDTSYLLTPVAQAQLLWLLGWAL 240
QAPSWPAAEEGEGERSLTAREHSPEEARELRAAVIQLLDTSYLLTPVAQAQLLWLLGWAL
Sbjct: 181 QAPSWPAAEEGEGERSLTAREHSPEEARELRAAVIQLLDTSYLLTPVAQAQLLWLLGWAL 240
Query: 241 RGLQGQPPALFKPQLVRLLGTAQLTLLHAMLALKAAFGEALFTAQDEALLLRRLTLAAQH 300
RGLQGQPPALFKPQLVRLLGTAQLTLLHAMLALKAAFGEALFTAQDEALLLRRLTLAAQH
Sbjct: 241 RGLQGQPPALFKPQLVRLLGTAQLTLLHAMLALKAAFGEALFTAQDEALLLRRLTLAAQH 300
Query: 301 PALPPPTHLFYLHCVLSFPENWPLGPEGEEAAPLLLGPQLCRGLLPSLLHDPMALLARLH 360
PALPPPTHLFYLHCVLSFPENWPLGPEGEEAAPLLLGPQLCRGLLPSLLHDPMALLARLH
Sbjct: 301 PALPPPTHLFYLHCVLSFPENWPLGPEGEEAAPLLLGPQLCRGLLPSLLHDPMALLARLH 360
Query: 361 LLCLLCAEEEEEEKGQLPSPRHYLEELLAGLRQRAALDGGPRALATLCFQASYLVACCLA 420
LLCLLCAEEEEEEKGQLPSPRHYLEELLAGLRQRAALDGGPRALATLCFQASYLVACCLA
Sbjct: 361 LLCLLCAEEEEEEKGQLPSPRHYLEELLAGLRQRAALDGGPRALATLCFQASYLVACCLA 420
Query: 421 GQPTVLTPLIHGLAQLYQARPMLAPHFVDLLDQVDSELREPLKVVLRQVVVSRPGRDEAL 480
GQPTVLTPLIHGLAQLYQARPMLAPHFVDLLDQVDSELREPLKVVLRQVVVSRPGRDEAL
Sbjct: 421 GQPTVLTPLIHGLAQLYQARPMLAPHFVDLLDQVDSELREPLKVVLRQVVVSRPGRDEAL 480
Query: 481 CWHLQMLAKVADGDAQSATLNFLQAAAAHCTNWDLQQGLLRVCRALLRAGVRGGLVDLLQ 540
CWHLQMLAKVADGDAQSATLNFLQAAAAHCTNWDLQQGLLRVCRALLRAGVRGGLVDLLQ
Sbjct: 481 CWHLQMLAKVADGDAQSATLNFLQAAAAHCTNWDLQQGLLRVCRALLRAGVRGGLVDLLQ 540
Query: 541 VLARQLEDPDGRDHARLYYILLAHLAAPKLGVALGPSLAAPALASSLVAENQGFVAALMV 600
VLARQLEDPDGRDHARLYYILLAHLAAPKLGVALGPSLAAPALASSLVAENQGFVAALMV
Sbjct: 541 VLARQLEDPDGRDHARLYYILLAHLAAPKLGVALGPSLAAPALASSLVAENQGFVAALMV 600
Query: 601 QEAPALVRLSLGSHRVKGPLPVLKLQPEALEPIYSLELRFRVEGQLYAPLEAVHVPCLCP 660
QEAPALVRLSLGSHRVKGPLPVLKLQPEALEPIYSLELRFRVEGQLYAPLEAVHVPCLCP
Sbjct: 601 QEAPALVRLSLGSHRVKGPLPVLKLQPEALEPIYSLELRFRVEGQLYAPLEAVHVPCLCP 660
Query: 661 GRPARPLLLPLQPRCPAPARLDVHALYTTSTGLTCHAHLPPLFVNFADLFLPFPQPPEGA 720
GRPARPLLLPLQPRCPAPARLDVHALYTTSTGLTCHAHLPPLFVNFADLFLPFPQPPEGA
Sbjct: 661 GRPARPLLLPLQPRCPAPARLDVHALYTTSTGLTCHAHLPPLFVNFADLFLPFPQPPEGA 720
Query: 721 GLGFFEELWDSCLPEGAESRVWCPLGPQGLEGLVSRHLEPFVVVAQPPTSYCVAIHLPPD 780
GLGFFEELWDSCLPEGAESRVWCPLGPQGLEGLVSRHLEPFVVVAQPPTSYCVAIHLPPD
Sbjct: 721 GLGFFEELWDSCLPEGAESRVWCPLGPQGLEGLVSRHLEPFVVVAQPPTSYCVAIHLPPD 780
Query: 781 SKLLLRLEAALADGVPVALRTDDWAVLPLAGDYLRGLAAAV 821
SKLLLRLEAALADGVPVALRTDDWAVLPLAGDYLRGLAAAV
Sbjct: 781 SKLLLRLEAALADGVPVALRTDDWAVLPLAGDYLRGLAAAV 821
>gi|226529806 histone deacetylase 10 isoform 2 [Homo sapiens]
Length = 649
Score = 32.7 bits (73), Expect = 1.4
Identities = 57/226 (25%), Positives = 84/226 (37%), Gaps = 22/226 (9%)
Query: 397 LDGGPRALATLCFQASYLVACCLAGQPTVLTPLIHGLAQLYQARPMLAPHFVDLLDQVDS 456
L GGP A +S L CL P+V T + + P D++ Q S
Sbjct: 362 LPGGPVCKAAASAPSSLLDQPCLCPAPSVRTAVALTTPDITLVLP------PDVIQQEAS 415
Query: 457 ELREPLKVVLR-QVVVSRPGRDEALCWHLQMLAKVADGDAQSATLNFLQAAAAHCTNWDL 515
LRE + R ++R AL L +L + DG S +AAA +
Sbjct: 416 ALREETEAWARPHESLAREEALTALGKLLYLLDGMLDGQVNSGIAATPASAAAATLD--- 472
Query: 516 QQGLLRVCRALLRAGVRGGLVDLLQVLARQLEDPDGRDH-ARLYYILLAHLAAPKLGVAL 574
+R G+ G LL V QL+ P H R ++ + A L +
Sbjct: 473 ---------VAVRRGLSHGAQRLLCVALGQLDRPPDLAHDGRSLWLNIRGKEAAALSM-F 522
Query: 575 GPSLAAPALASSLVAENQGFVAALMVQEAPALVRLSLG-SHRVKGP 619
S P + ++ G V L P LV ++LG H ++GP
Sbjct: 523 HVSTPLPVMTGGFLSCILGLVLPLAYGFQPDLVLVALGPGHGLQGP 568
>gi|20070354 histone deacetylase 10 isoform 1 [Homo sapiens]
Length = 669
Score = 32.7 bits (73), Expect = 1.4
Identities = 57/226 (25%), Positives = 84/226 (37%), Gaps = 22/226 (9%)
Query: 397 LDGGPRALATLCFQASYLVACCLAGQPTVLTPLIHGLAQLYQARPMLAPHFVDLLDQVDS 456
L GGP A +S L CL P+V T + + P D++ Q S
Sbjct: 382 LPGGPVCKAAASAPSSLLDQPCLCPAPSVRTAVALTTPDITLVLP------PDVIQQEAS 435
Query: 457 ELREPLKVVLR-QVVVSRPGRDEALCWHLQMLAKVADGDAQSATLNFLQAAAAHCTNWDL 515
LRE + R ++R AL L +L + DG S +AAA +
Sbjct: 436 ALREETEAWARPHESLAREEALTALGKLLYLLDGMLDGQVNSGIAATPASAAAATLD--- 492
Query: 516 QQGLLRVCRALLRAGVRGGLVDLLQVLARQLEDPDGRDH-ARLYYILLAHLAAPKLGVAL 574
+R G+ G LL V QL+ P H R ++ + A L +
Sbjct: 493 ---------VAVRRGLSHGAQRLLCVALGQLDRPPDLAHDGRSLWLNIRGKEAAALSM-F 542
Query: 575 GPSLAAPALASSLVAENQGFVAALMVQEAPALVRLSLG-SHRVKGP 619
S P + ++ G V L P LV ++LG H ++GP
Sbjct: 543 HVSTPLPVMTGGFLSCILGLVLPLAYGFQPDLVLVALGPGHGLQGP 588
>gi|113420249 PREDICTED: hypothetical protein LOC728071 [Homo
sapiens]
Length = 390
Score = 32.3 bits (72), Expect = 1.8
Identities = 44/160 (27%), Positives = 60/160 (37%), Gaps = 34/160 (21%)
Query: 49 AGGALGPTSGASCRLLPLLLGLAAGSDLGRGFVPASEQRPLQATACECLRELESCKPG-- 106
AG + GP + ++ LL LA G+ + LQA A + L C PG
Sbjct: 8 AGASGGPEASPEAEVVKLLPFLAPGA-----------RADLQAAAVRHVLALTGCGPGRA 56
Query: 107 LLGGSLGLLRGLLGQEGPVQPLSLLLALALRNTLVLQSRVGAGLGGLLTDKVSPTGGGPW 166
LL G LL+ L+ + P S A R + L + G L D P
Sbjct: 57 LLAGQAALLQALM----ELAPASAPARDAARALVNLAADPGLHETLLAADPGLPA----- 107
Query: 167 DWTLVEEGDGRLQPQA--PSWPAAEEGEGERSLTAREHSP 204
RL +A P WP AEE + +RE +P
Sbjct: 108 ----------RLMGRALDPQWPWAEEAAAALANLSREPAP 137
>gi|149193331 tripartite motif protein 15 [Homo sapiens]
Length = 465
Score = 32.3 bits (72), Expect = 1.8
Identities = 38/159 (23%), Positives = 54/159 (33%), Gaps = 27/159 (16%)
Query: 329 EEAAPLLLGPQLCRGLLPSLLHDPMALLARLHLLCLLCAEEEEEEKGQLPSPRHYLEELL 388
E+A + G CR LP+L ++ LLC LC EEE+ E P P L
Sbjct: 24 EDAVTIPCGHTFCRLCLPALSQMGAQSSGKI-LLCPLCQEEEQAETPMAPVP-------L 75
Query: 389 AGLRQRAALDGGPRALATLCFQASYLVACCLAGQPTVLTPLIHGLAQLYQARPMLAPHFV 448
L + + G + A +L C G P H V
Sbjct: 76 GPLGETYCEEHGEKIYFFCENDAEFLCVFCREG-------------------PTHQAHTV 116
Query: 449 DLLDQVDSELREPLKVVLRQVVVSRPGRDEALCWHLQML 487
LD+ R+ L+ L + R ++ C Q L
Sbjct: 117 GFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKL 155
>gi|13124773 brain protein 16 [Homo sapiens]
Length = 390
Score = 32.3 bits (72), Expect = 1.8
Identities = 44/160 (27%), Positives = 60/160 (37%), Gaps = 34/160 (21%)
Query: 49 AGGALGPTSGASCRLLPLLLGLAAGSDLGRGFVPASEQRPLQATACECLRELESCKPG-- 106
AG + GP + ++ LL LA G+ + LQA A + L C PG
Sbjct: 8 AGASGGPEASPEAEVVKLLPFLAPGA-----------RADLQAAAVRHVLALTGCGPGRA 56
Query: 107 LLGGSLGLLRGLLGQEGPVQPLSLLLALALRNTLVLQSRVGAGLGGLLTDKVSPTGGGPW 166
LL G LL+ L+ + P S A R + L + G L D P
Sbjct: 57 LLAGQAALLQALM----ELAPASAPARDAARALVNLAADPGLHETLLAADPGLPA----- 107
Query: 167 DWTLVEEGDGRLQPQA--PSWPAAEEGEGERSLTAREHSP 204
RL +A P WP AEE + +RE +P
Sbjct: 108 ----------RLMGRALDPQWPWAEEAAAALANLSREPAP 137
>gi|4826669 cadherin 15 preproprotein [Homo sapiens]
Length = 814
Score = 32.0 bits (71), Expect = 2.4
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 79 GFVPASEQRPLQATACECLRELESCKPG---LLGGSLGLLRG--LLGQEGPVQPLSLLLA 133
G P ++PL T C C ++ C PG LL G GL G ++ + L L+L
Sbjct: 565 GQPPQQREQPLNVTVCRCGKD-GVCLPGAAALLAGGTGLSLGALVIVLASALLLLVLVLL 623
Query: 134 LALRNTLVLQSRVGAGL 150
+ALR QSR G GL
Sbjct: 624 VALRARFWKQSR-GKGL 639
>gi|239755004 PREDICTED: hypothetical protein [Homo sapiens]
Length = 558
Score = 31.6 bits (70), Expect = 3.1
Identities = 41/159 (25%), Positives = 62/159 (38%), Gaps = 18/159 (11%)
Query: 43 ATTALAAGGALGPTSGASCRLLPLLLGLAAGSDLGRGFVPASEQRPLQATACECLRELES 102
A AL + G T A+C G G+ G+G A + P+ + A
Sbjct: 71 APAALCSSGGCALTRRAACG------GRGGGTRAGQGGRGAWGEAPVGSAALSSPT---- 120
Query: 103 CKPGLLGGSLGLLRGLLGQEGPVQPLSLLLALALRNTLVLQSRVGAGLGGLLTDKVSPTG 162
G LL L +G ++ +L LA + + ++ LL+ + S
Sbjct: 121 -------GVSHLLSSQLRGQGALESCGGILPLAAQRRSMDKASGYVRACPLLSIRRSSFR 173
Query: 163 GGPWDWTLVEEGDGRLQPQAPSWPAAEEGEGERSLTARE 201
G W L +E G L+P+APS A EGE L A +
Sbjct: 174 PG-WSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAED 211
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 31.6 bits (70), Expect = 3.1
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 145 RVGAGLGGLLTDKVSPTGGGPWDWTLVEEGDG--RLQPQA--PSWPAAEEGEGERSLTAR 200
+ G GL + D ++ G W W LV G LQ QA P PAA E R+ AR
Sbjct: 387 QAGPGLAKVDVDVLAGALGLRWQWVLVHAGQAGQPLQGQARGPHRPAALAQEALRAAAAR 446
Query: 201 EHSPEEAR 208
H R
Sbjct: 447 PHGRRHYR 454
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 31.6 bits (70), Expect = 3.1
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 145 RVGAGLGGLLTDKVSPTGGGPWDWTLVEEGDG--RLQPQA--PSWPAAEEGEGERSLTAR 200
+ G GL + D ++ G W W LV G LQ QA P PAA E R+ AR
Sbjct: 387 QAGPGLAKVDVDVLAGALGLRWQWVLVHAGQAGQPLQGQARGPHRPAALAQEALRAAAAR 446
Query: 201 EHSPEEAR 208
H R
Sbjct: 447 PHGRRHYR 454
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 31.6 bits (70), Expect = 3.1
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 178 LQPQAPSWPAAEEGEGERSLTAREHSPEEARELRAAVIQ-LLDTSYLLTPVAQAQLL 233
+QPQA PAA + + +TA++ + A++ A Q L T +L TP++QAQ L
Sbjct: 2943 IQPQAAQGPAAVQ----QKITAQQITTPGAQQKVAYAAQPALKTQFLTTPISQAQKL 2995
>gi|208431824 forkhead box I3 [Homo sapiens]
Length = 420
Score = 31.6 bits (70), Expect = 3.1
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 712 PFPQPPEGAG-LGFFEELWDSCLPEGAESRVWCPLGPQGLEGLVSRHLEPFVVVAQPPTS 770
PF QPP AG G + + P S P GP L L E + + +PP S
Sbjct: 91 PFLQPPPAAGTFGCSQRPFAQPAPAAPASPA-APAGPGELGWLSMASREDLMKMVRPPYS 149
Query: 771 Y----CVAIHLPPDSKLLL-RLEAALADGVPVALRT 801
Y +AI P+ KL L + +AD P R+
Sbjct: 150 YSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRS 185
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 31.6 bits (70), Expect = 3.1
Identities = 49/195 (25%), Positives = 73/195 (37%), Gaps = 8/195 (4%)
Query: 529 AGVRGGLVDLLQVLARQLEDPDGRDHARLYYILLA-HLAAPKLGVALGPSLA-APALASS 586
A V + D QV L P H+ L + +A + AP +A P+LA AP +
Sbjct: 211 ASVPHSVPDAFQV---PLSVPAPVPHSGLVPVQVATSVPAPSPPLAPVPALAPAPPSVPT 267
Query: 587 LVAENQGF-VAALMVQEAPALVRLSLGSHRVKGPLPVLKLQPEALEPIYSLELRFRVEGQ 645
L++++ V+A ++ PA S G + P P P + P+ ++
Sbjct: 268 LISDSNPLSVSASVLVPVPASAPPS-GPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAP 326
Query: 646 LYAPLEAVHVPCLCPGRPARPLLLPLQPRCPAPARLDVHALYTTSTGLTCHAHLPPLFVN 705
L V P L P + P P P P P +T T + A P
Sbjct: 327 TLV-LAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPT 385
Query: 706 FADLFLPFPQPPEGA 720
A +F P P P A
Sbjct: 386 PAPIFTPAPTPMPAA 400
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 31.2 bits (69), Expect = 4.1
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 562 LAHLAAPKLGVALGPSLAAPALASSLVAENQGFVAALMVQEAPALVRLSLGSHRVKGPLP 621
LA AAP L A P+LAA A + A AA V APA + SH K +P
Sbjct: 522 LAAAAAPALAAAAAPALAAAAAPAPAPA------AAPAVAAAPAAAASAAPSHSQKPSVP 575
Query: 622 VLK 624
+++
Sbjct: 576 LIQ 578
>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
Length = 1603
Score = 30.8 bits (68), Expect = 5.3
Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
Query: 29 PPRPSALRRPLLLAATTALAAGGALGPTSGASCRLLPLLLGLAAGSDLGRGFVPASEQRP 88
P P A + PL +A G GP + A+ PLL SDL VP P
Sbjct: 1509 PATPKADKEPLEMARPP----GPPRGPAAAAAGYGCPLL------SDLTLSPVPRDSLLP 1558
Query: 89 LQATACECLRELESCKPGLLGGSLGLLRGLLGQEGP 124
LQ TA + PGL GG G + + P
Sbjct: 1559 LQDTAYRYPGFMPQAHPGLGGGPKSGFLGPMAEPHP 1594
>gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens]
Length = 4753
Score = 30.4 bits (67), Expect = 7.0
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 280 ALFTAQDEAL--LLRRLTLAAQHPALPPPTHLFYLHCVLSFPENWPLGP----EGEEAAP 333
+LF+A++EAL +RR + P PPP LHC L P+ + E +A+
Sbjct: 865 SLFSAENEALDISVRRQFGESPIPPCPPPPQPHLLHCPLLAPQLLDMWEAFQFEKSQASE 924
Query: 334 LLLGPQLCRGLLPSLLHDPMALLARL 359
LL + ++P L A LA L
Sbjct: 925 FLLSKR--HAIMPKLQQLMAAALAEL 948
>gi|11545912 nucleotide-binding oligomerization domain containing 2
[Homo sapiens]
Length = 1040
Score = 30.4 bits (67), Expect = 7.0
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 336 LGPQLCRGLLPSLLHDPMALLARLHLLCLLCAEEEEEEKGQLPSPRHYLEELLAG--LRQ 393
LGP L RG LP+LLH L L + C + + + QL + + +++ G +R
Sbjct: 535 LGPSLLRGRLPTLLHLGRLALWGLGMCCYVFSAQ------QLQAAQVSPDDISLGFLVRA 588
Query: 394 RAALDGGPRALATL-----CFQASYLVACCLAGQPTVLTPLIH 431
+ + G L L CF A++ +A P +L L +
Sbjct: 589 KGVVPGSTAPLEFLHITFQCFFAAFYLALSADVPPALLRHLFN 631
>gi|239740955 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 1 [Homo sapiens]
Length = 1635
Score = 30.0 bits (66), Expect = 9.1
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 179 QPQAPSWPAAEEGEGERSLTAREH-------------SPEEARELRAAVIQLLDTSYLLT 225
Q A P E EGE SLT +E P E L A +Q LD + +T
Sbjct: 496 QEAAAEHPQTAE-EGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTIT 554
Query: 226 PVAQAQLLWLLGWALRGLQGQPPALFKPQL 255
P ++ ++ L ++ QPP PQL
Sbjct: 555 PESKTEV--ELSPTMKETPTQPPKKVVPQL 582
>gi|239740953 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 2 [Homo sapiens]
Length = 1700
Score = 30.0 bits (66), Expect = 9.1
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 179 QPQAPSWPAAEEGEGERSLTAREH-------------SPEEARELRAAVIQLLDTSYLLT 225
Q A P E EGE SLT +E P E L A +Q LD + +T
Sbjct: 496 QEAAAEHPQTAE-EGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTIT 554
Query: 226 PVAQAQLLWLLGWALRGLQGQPPALFKPQL 255
P ++ ++ L ++ QPP PQL
Sbjct: 555 PESKTEV--ELSPTMKETPTQPPKKVVPQL 582
>gi|13376146 zinc finger and BTB domain containing 3 [Homo sapiens]
Length = 574
Score = 30.0 bits (66), Expect = 9.1
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 28/122 (22%)
Query: 564 HLAAPKLGVALGPSLAAPALASSLVAEN--QGFVAALMVQEAPALVRLSLGSHRVKGPLP 621
HL AP VA SLA+P+ ++ + N ++A+ ++ PLP
Sbjct: 256 HLRAPHPPVA-DVSLASPSSSTETIPTNYFSSGISAVSLE-----------------PLP 297
Query: 622 VLKLQPEALEPIYSLELRFRVEGQLYAPLEAVHVPCLCPGRPARPLLLPLQPRCPAPARL 681
L + PE+L + + PL+ + P P P+ P+ + PAPA
Sbjct: 298 SLDVGPESLRVVEPKDPG--------GPLQGFYPPASAPTSAPAPVSAPVPSQAPAPAEA 349
Query: 682 DV 683
++
Sbjct: 350 EL 351
>gi|34101268 kelch-like 8 [Homo sapiens]
Length = 620
Score = 30.0 bits (66), Expect = 9.1
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 497 SATLNFLQAAAAHCTNWDLQQGLLRVCRALLRAGVRGGLVDLLQVLARQLEDPDGRDHAR 556
+A + +L A H + W L + L +V LL G+V Q++ + L+ D D AR
Sbjct: 232 NAAIKWLLANPQHHSKW-LDETLAQVRLPLLPVDFLMGVVAKEQIVKQNLKCRDLLDEAR 290
Query: 557 LYYILLAHLAAP 568
Y++ L+ A P
Sbjct: 291 NYHLHLSSRAVP 302
>gi|116325993 c114 SLIT-like testicular protein [Homo sapiens]
Length = 1700
Score = 30.0 bits (66), Expect = 9.1
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 179 QPQAPSWPAAEEGEGERSLTAREH-------------SPEEARELRAAVIQLLDTSYLLT 225
Q A P E EGE SLT +E P E L A +Q LD + +T
Sbjct: 496 QEAAAEHPQTAE-EGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTIT 554
Query: 226 PVAQAQLLWLLGWALRGLQGQPPALFKPQL 255
P ++ ++ L ++ QPP PQL
Sbjct: 555 PESKTEV--ELSPTMKETPTQPPKKVVPQL 582
>gi|110665701 leucine rich repeat containing 37A [Homo sapiens]
Length = 1700
Score = 30.0 bits (66), Expect = 9.1
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 179 QPQAPSWPAAEEGEGERSLTAREH-------------SPEEARELRAAVIQLLDTSYLLT 225
Q A P E EGE SLT +E P E L A +Q LD + +T
Sbjct: 496 QEAAAEHPQTAE-EGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTIT 554
Query: 226 PVAQAQLLWLLGWALRGLQGQPPALFKPQL 255
P ++ ++ L ++ QPP PQL
Sbjct: 555 PESKTEV--ELSPTMKETPTQPPKKVVPQL 582
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,010,293
Number of Sequences: 37866
Number of extensions: 1926011
Number of successful extensions: 5753
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5743
Number of HSP's gapped (non-prelim): 35
length of query: 821
length of database: 18,247,518
effective HSP length: 111
effective length of query: 710
effective length of database: 14,044,392
effective search space: 9971518320
effective search space used: 9971518320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.