Guide to the Human Genome
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Name: MS4A15 Sequence: fasta or formatted (240aa) NCBI GI: 149588599
Description:

membrane-spanning 4-domains, subfamily A, member 15 isoform 1

Referenced in:

MS4 Family

Other entries for this name:
alt prot [147aa] membrane-spanning 4-domains, subfamily A, member 15 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.1         29           2
 C cysteine            2.1          5           1
 D aspartate           2.5          6           1
 E glutamate           2.9          7           2
 F phenylalanine       7.1         17           2
 G glycine             9.2         22           2
 H histidine           2.1          5           1
 I isoleucine          7.1         17           2
 K lysine              0.8          2           1
 L leucine             8.8         21           2
 M methionine          2.9          7           1
 N asparagine          3.8          9           2
 P proline             9.6         23           3
 Q glutamine           3.3          8           1
 R arginine            2.9          7           2
 S serine              6.7         16           2
 T threonine           5.4         13           1
 V valine              9.2         22           2
 W tryptophan          0.4          1           1
 Y tyrosine            1.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane-spanning 4-domains, subfamily A, member 15... 
MS4A15                0.587   membrane-spanning 4-domains, subfamily A, member 15 ...
MS4A12                0.221   membrane-spanning 4-domains, subfamily A, member 12 [...
MS4A8B                0.218   membrane-spanning 4-domains, subfamily A, member 8B ...
LOC728588             0.131   PREDICTED: similar to membrane-spanning 4-domains, ...
LOC728588             0.131   PREDICTED: similar to membrane-spanning 4-domains, ...
LOC728588             0.131   PREDICTED: similar to membrane-spanning 4-domains, ...
MS4A4A                0.124   membrane-spanning 4-domains, subfamily A, member 4 i...
MS4A4A                0.124   membrane-spanning 4-domains, subfamily A, member 4 i...
MS4A1                 0.118   membrane-spanning 4-domains, subfamily A, member 1 [...
MS4A1                 0.118   membrane-spanning 4-domains, subfamily A, member 1 [...
MS4A4E                0.103   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A4E                0.103   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A4E                0.103   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A2                 0.096   membrane-spanning 4-domains, subfamily A, member 2 ...
MS4A2                 0.096   membrane-spanning 4-domains, subfamily A, member 2 is...
MS4A6A                0.094   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A5                 0.092   membrane-spanning 4-domains, subfamily A, member 5 [...
MS4A14                0.083   membrane-spanning 4-domains, subfamily A, member 14...
MS4A6A                0.083   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A6A                0.083   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A3                 0.070   membrane-spanning 4-domains, subfamily A, member 3 i...
MS4A10                0.068   membrane-spanning 4-domains, subfamily A, member 10...
MS4A7                 0.059   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A7                 0.059   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A14                0.044   membrane-spanning 4-domains, subfamily A, member 14...
MS4A3                 0.031   membrane-spanning 4-domains, subfamily A, member 3 i...
POM121C               0.024   POM121 membrane glycoprotein (rat)-like 
POM121                0.024   nuclear pore membrane protein 121 
YLPM1                 0.022   YLP motif containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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