Guide to the Human Genome
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Name: MS4A4A Sequence: fasta or formatted (220aa) NCBI GI: 20070328
Description:

membrane-spanning 4-domains, subfamily A, member 4 isoform a

Referenced in:

MS4 Family

Other entries for this name:
alt prot [239aa] membrane-spanning 4-domains, subfamily A, member 4 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         14           2
 C cysteine            3.2          7           2
 D aspartate           0.5          1           1
 E glutamate           2.7          6           1
 F phenylalanine       3.2          7           1
 G glycine            11.4         25           2
 H histidine           3.2          7           2
 I isoleucine          7.3         16           2
 K lysine              2.7          6           1
 L leucine            11.4         25           3
 M methionine          7.3         16           2
 N asparagine          4.5         10           2
 P proline             4.5         10           1
 Q glutamine           2.3          5           1
 R arginine            0.9          2           1
 S serine             10.9         24           2
 T threonine           6.4         14           2
 V valine              7.3         16           2
 W tryptophan          0.9          2           1
 Y tyrosine            3.2          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane-spanning 4-domains, subfamily A, member 4 i... 
MS4A4A                1.000   membrane-spanning 4-domains, subfamily A, member 4 i...
MS4A4E                0.728   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A4E                0.728   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A4E                0.723   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A8B                0.172   membrane-spanning 4-domains, subfamily A, member 8B ...
MS4A3                 0.158   membrane-spanning 4-domains, subfamily A, member 3 i...
MS4A12                0.153   membrane-spanning 4-domains, subfamily A, member 12 [...
MS4A15                0.136   membrane-spanning 4-domains, subfamily A, member 15...
MS4A5                 0.136   membrane-spanning 4-domains, subfamily A, member 5 [...
MS4A1                 0.126   membrane-spanning 4-domains, subfamily A, member 1 [...
MS4A1                 0.126   membrane-spanning 4-domains, subfamily A, member 1 [...
MS4A2                 0.112   membrane-spanning 4-domains, subfamily A, member 2 is...
MS4A6A                0.112   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A14                0.110   membrane-spanning 4-domains, subfamily A, member 14...
MS4A2                 0.105   membrane-spanning 4-domains, subfamily A, member 2 ...
LOC728588             0.103   PREDICTED: similar to membrane-spanning 4-domains, ...
LOC728588             0.103   PREDICTED: similar to membrane-spanning 4-domains, ...
LOC728588             0.103   PREDICTED: similar to membrane-spanning 4-domains, ...
MS4A6A                0.100   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A7                 0.093   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A7                 0.093   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A3                 0.088   membrane-spanning 4-domains, subfamily A, member 3 i...
MS4A15                0.079   membrane-spanning 4-domains, subfamily A, member 15 ...
MS4A6A                0.076   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A14                0.069   membrane-spanning 4-domains, subfamily A, member 14...
MS4A7                 0.043   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A7                 0.043   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A3                 0.036   membrane-spanning 4-domains, subfamily A, member 3 i...
MS4A10                0.026   membrane-spanning 4-domains, subfamily A, member 10...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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