Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MS4A4E Sequence: fasta or formatted (243aa) NCBI GI: 239755562
Description:

PREDICTED: membrane-spanning 4-domains, subfamily A, member 4E isoform 1

Referenced in:

MS4 Family

Other entries for this name:
alt prot [243aa] PREDICTED: membrane-spanning 4-domains, subfamily A, member 4E is...
alt mRNA [243aa] PREDICTED: membrane-spanning 4-domains, subfamily A, member 4E is...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         16           2
 C cysteine            3.7          9           2
 D aspartate           2.1          5           1
 E glutamate           3.7          9           2
 F phenylalanine       4.1         10           2
 G glycine             7.8         19           2
 H histidine           2.1          5           1
 I isoleucine          8.2         20           2
 K lysine              4.1         10           1
 L leucine            10.3         25           3
 M methionine          5.8         14           2
 N asparagine          2.9          7           1
 P proline             3.7          9           1
 Q glutamine           2.1          5           1
 R arginine            2.5          6           1
 S serine             11.1         27           2
 T threonine           6.2         15           2
 V valine              8.6         21           2
 W tryptophan          0.8          2           1
 Y tyrosine            3.7          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: membrane-spanning 4-domains, subfamily A... 
MS4A4E                1.000   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A4E                0.998   PREDICTED: membrane-spanning 4-domains, subfamily A...
MS4A4A                0.682   membrane-spanning 4-domains, subfamily A, member 4 i...
MS4A4A                0.664   membrane-spanning 4-domains, subfamily A, member 4 i...
MS4A3                 0.142   membrane-spanning 4-domains, subfamily A, member 3 i...
MS4A8B                0.129   membrane-spanning 4-domains, subfamily A, member 8B ...
MS4A12                0.126   membrane-spanning 4-domains, subfamily A, member 12 [...
MS4A5                 0.124   membrane-spanning 4-domains, subfamily A, member 5 [...
MS4A6A                0.102   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A6A                0.102   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A15                0.102   membrane-spanning 4-domains, subfamily A, member 15...
MS4A2                 0.085   membrane-spanning 4-domains, subfamily A, member 2 is...
MS4A1                 0.085   membrane-spanning 4-domains, subfamily A, member 1 [...
MS4A1                 0.085   membrane-spanning 4-domains, subfamily A, member 1 [...
MS4A14                0.081   membrane-spanning 4-domains, subfamily A, member 14...
MS4A7                 0.076   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A7                 0.076   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A3                 0.074   membrane-spanning 4-domains, subfamily A, member 3 i...
MS4A2                 0.072   membrane-spanning 4-domains, subfamily A, member 2 ...
LOC728588             0.070   PREDICTED: similar to membrane-spanning 4-domains, ...
LOC728588             0.070   PREDICTED: similar to membrane-spanning 4-domains, ...
LOC728588             0.070   PREDICTED: similar to membrane-spanning 4-domains, ...
MS4A6A                0.065   membrane-spanning 4-domains, subfamily A, member 6A ...
MS4A15                0.061   membrane-spanning 4-domains, subfamily A, member 15 ...
MS4A14                0.050   membrane-spanning 4-domains, subfamily A, member 14...
MS4A7                 0.037   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A7                 0.037   membrane-spanning 4-domains, subfamily A, member 7 i...
MS4A3                 0.037   membrane-spanning 4-domains, subfamily A, member 3 i...
MS4A13                0.024   membrane-spanning 4-domains, subfamily A, member 13...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press