Guide to the Human Genome
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Search of human proteins with 149408115

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|149408115 unkempt homolog (Drosophila)-like isoform 1 [Homo
sapiens]
         (232 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|149408115 unkempt homolog (Drosophila)-like isoform 1 [Homo s...   477   e-135
gi|122937239 zinc finger CCCH-type domain containing 5 [Homo sap...   186   2e-47
gi|191252814 RIMS binding protein 3B [Homo sapiens]                    47   1e-05
gi|191252806 RIMS binding protein 3C [Homo sapiens]                    47   1e-05
gi|153792195 DKFZP434H0735 protein [Homo sapiens]                      47   1e-05
gi|122937219 F-box protein 41 [Homo sapiens]                           45   5e-05
gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap...    43   3e-04
gi|18490978 intermediate filament family orphan isoform 2 [Homo ...    42   6e-04
gi|89213250 intermediate filament family orphan isoform 4 [Homo ...    42   6e-04
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]     41   8e-04
gi|5729765 cell growth regulator with ring finger domain 1 [Homo...    40   0.001
gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens]         40   0.002
gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]         40   0.002
gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens]         40   0.002
gi|38788243 myosin regulatory light chain interacting protein [H...    40   0.002
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ...    40   0.002
gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo s...    39   0.004
gi|21264330 mindbomb homolog 2 [Homo sapiens]                          39   0.004
gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo sa...    39   0.005
gi|30348954 mindbomb homolog 1 [Homo sapiens]                          39   0.005
gi|147902746 MEX3A protein [Homo sapiens]                              39   0.005
gi|39930383 BarH-like homeobox 2 [Homo sapiens]                        38   0.006
gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens]            38   0.008
gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens]            38   0.008
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    38   0.008
gi|226495417 coiled-coil domain containing 102A [Homo sapiens]         37   0.011
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     37   0.011
gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa...    37   0.011
gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap...    37   0.011
gi|28329422 acute myelogenous leukemia 1 translocation 1 protein...    37   0.011

>gi|149408115 unkempt homolog (Drosophila)-like isoform 1 [Homo
           sapiens]
          Length = 232

 Score =  477 bits (1227), Expect = e-135
 Identities = 232/232 (100%), Positives = 232/232 (100%)

Query: 1   MTPPQQPPPLRSEPGTLGSAASSYSPLGLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSS 60
           MTPPQQPPPLRSEPGTLGSAASSYSPLGLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSS
Sbjct: 1   MTPPQQPPPLRSEPGTLGSAASSYSPLGLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSS 60

Query: 61  SASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQL 120
           SASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQL
Sbjct: 61  SASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQL 120

Query: 121 ALQKKEEVEAQVKQLQEELEGLGVASTLPGLRGCGDIGTIPLPKLHSLQSQLRLDLEAVD 180
           ALQKKEEVEAQVKQLQEELEGLGVASTLPGLRGCGDIGTIPLPKLHSLQSQLRLDLEAVD
Sbjct: 121 ALQKKEEVEAQVKQLQEELEGLGVASTLPGLRGCGDIGTIPLPKLHSLQSQLRLDLEAVD 180

Query: 181 GVIFQLRAKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCKGQPLQW 232
           GVIFQLRAKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCKGQPLQW
Sbjct: 181 GVIFQLRAKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCKGQPLQW 232


>gi|122937239 zinc finger CCCH-type domain containing 5 [Homo
           sapiens]
          Length = 886

 Score =  186 bits (471), Expect = 2e-47
 Identities = 101/217 (46%), Positives = 138/217 (63%), Gaps = 13/217 (5%)

Query: 11  RSEPGTLGSAASSYSPLGLNGVPGSIWD-FVSGSFSPSPSPILSAGPPSSSSASPNGAEL 69
           +SE   LG++AS +  LGLNG+  SIW+ F SGSFSP  SP   +G        P  AEL
Sbjct: 673 QSENTFLGTSAS-HGSLGLNGMNSSIWEHFASGSFSPGTSPAFLSG--------PGAAEL 723

Query: 70  ARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVE 129
           AR+R++LDEA   I+QWEESW+Q KQ CDAW++EA+EA ERA  A ++ +LA ++++ +E
Sbjct: 724 ARLRQELDEANSTIKQWEESWKQAKQACDAWKKEAEEAGERASAAGAECELAREQRDALE 783

Query: 130 AQVKQLQEELEGLGVASTLPGLRGCGDIGTIPLPKLHSLQSQLRLDLEAVDGVIFQLRAK 189
            QVK+LQEELE L        L    D+  + L  L+SLQ QLR  LE VD  +F +++ 
Sbjct: 784 VQVKKLQEELERLHAGPEPQALPAFSDLEALSLSTLYSLQKQLRAHLEQVDKAVFHMQSV 843

Query: 190 QCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCK 226
           +C+ C+E+    +  PCQH  LCE C A   ECP C+
Sbjct: 844 KCLKCQEQKRAVL--PCQHAALCELC-AEGSECPICQ 877


>gi|191252814 RIMS binding protein 3B [Homo sapiens]
          Length = 1639

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%)

Query: 47  SPSPILSAGPPSSSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQE 106
           SPSP L A P     +SP  A L   RR+L++ + ++      W+  ++   A +R+ +E
Sbjct: 5   SPSP-LGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLRE 63

Query: 107 AKERARVADSDRQLALQKKEEVEAQ----VKQLQEELE 140
             ER R     RQLA + + + EAQ    ++QLQEE++
Sbjct: 64  EAERER-----RQLADRLRSKWEAQRSRELRQLQEEMQ 96


>gi|191252806 RIMS binding protein 3C [Homo sapiens]
          Length = 1639

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%)

Query: 47  SPSPILSAGPPSSSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQE 106
           SPSP L A P     +SP  A L   RR+L++ + ++      W+  ++   A +R+ +E
Sbjct: 5   SPSP-LGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLRE 63

Query: 107 AKERARVADSDRQLALQKKEEVEAQ----VKQLQEELE 140
             ER R     RQLA + + + EAQ    ++QLQEE++
Sbjct: 64  EAERER-----RQLADRLRSKWEAQRSRELRQLQEEMQ 96


>gi|153792195 DKFZP434H0735 protein [Homo sapiens]
          Length = 1639

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%)

Query: 47  SPSPILSAGPPSSSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQE 106
           SPSP L A P     +SP  A L   RR+L++ + ++      W+  ++   A +R+ +E
Sbjct: 5   SPSP-LGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLRE 63

Query: 107 AKERARVADSDRQLALQKKEEVEAQ----VKQLQEELE 140
             ER R     RQLA + + + EAQ    ++QLQEE++
Sbjct: 64  EAERER-----RQLADRLRSKWEAQRSRELRQLQEEMQ 96


>gi|122937219 F-box protein 41 [Homo sapiens]
          Length = 936

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 16/156 (10%)

Query: 1   MTPPQQPPPLRSEPGTLGSAASSYS------PLGLNGVPGSIWDFVSGSFSPSPSPILSA 54
           + P   P    +EPG + +AA+ Y+      PLG      S+      +  P P P    
Sbjct: 183 LVPASLPCEELAEPGLVPAAAARYALREIEIPLGELFARKSVASSACSTPPPGPGPGPCP 242

Query: 55  GPPSSSSASPNGAELA----------RVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREA 104
           GP S+S ASP+ A++A          R   +L+  +R  R  EE  Q++       Q E 
Sbjct: 243 GPASASPASPSPADVAYEEGLARLKIRALEKLEVDRRLERLSEEVEQKIAGQVGRLQAEL 302

Query: 105 QEAKERARVADSDRQLALQKKEEVEAQVKQLQEELE 140
           +        A  +     ++KEE+E +  +L  +++
Sbjct: 303 ERKAAELETARQESARLGREKEELEERASELSRQVD 338


>gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo
           sapiens]
          Length = 618

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 6/124 (4%)

Query: 110 RARVADSDRQLALQKKEEVEAQVKQLQEELEGLGVASTLPGLRGCGDIGTIPLPKLHSLQ 169
           +A V +      +++K ++  Q ++L + +   G A+         +I +     L   +
Sbjct: 484 KANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLFVDK 543

Query: 170 SQLRLDLEAVDGVIF--QLRAKQ----CVACRERAHGAVLRPCQHHILCEPCAATAPECP 223
           +   +  E V G+    QLR  Q    C  C ++    V  PC H ++C+ CA +  +CP
Sbjct: 544 NMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCP 603

Query: 224 YCKG 227
            C+G
Sbjct: 604 ICRG 607


>gi|18490978 intermediate filament family orphan isoform 2 [Homo
           sapiens]
          Length = 559

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 46/158 (29%), Positives = 66/158 (41%), Gaps = 42/158 (26%)

Query: 9   PLRSEPGTLGSAASSYSPLGLNG----------VPGSIWDFVSGS-FSPSPSPILSAGPP 57
           P RS  G L  +A+S S    +           +PG+IW F       P   P L  GP 
Sbjct: 159 PARSPAGPLAPSAASLSSSSTSTSTTYSSSARFMPGTIWSFSHARRLGPGLEPTLVQGP- 217

Query: 58  SSSSASPNGAE----------------LARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQ 101
             S   P+G                  LA+V+R+ DE KR+   WEE +    Q+ D   
Sbjct: 218 GLSWVHPDGVGVQIDTITPEIRALYNVLAKVKRERDEYKRR---WEEEYTVRIQLQD--- 271

Query: 102 REAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEEL 139
               E +E A+ AD+        +EE+  +V+QL+ EL
Sbjct: 272 -RVNELQEEAQEADA-------CQEELALKVEQLKAEL 301


>gi|89213250 intermediate filament family orphan isoform 4 [Homo
           sapiens]
          Length = 563

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 46/158 (29%), Positives = 66/158 (41%), Gaps = 42/158 (26%)

Query: 9   PLRSEPGTLGSAASSYSPLGLNG----------VPGSIWDFVSGS-FSPSPSPILSAGPP 57
           P RS  G L  +A+S S    +           +PG+IW F       P   P L  GP 
Sbjct: 159 PARSPAGPLAPSAASLSSSSTSTSTTYSSSARFMPGTIWSFSHARRLGPGLEPTLVQGP- 217

Query: 58  SSSSASPNGAE----------------LARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQ 101
             S   P+G                  LA+V+R+ DE KR+   WEE +    Q+ D   
Sbjct: 218 GLSWVHPDGVGVQIDTITPEIRALYNVLAKVKRERDEYKRR---WEEEYTVRIQLQD--- 271

Query: 102 REAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEEL 139
               E +E A+ AD+        +EE+  +V+QL+ EL
Sbjct: 272 -RVNELQEEAQEADA-------CQEELALKVEQLKAEL 301


>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
          Length = 651

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)

Query: 188 AKQCVACRERAHGAVLRPCQHHILCEPCAA-----TAPECPYCK 226
           A++CV C E    A L PC H++ C  CA      + PECP C+
Sbjct: 597 ARECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACR 640


>gi|5729765 cell growth regulator with ring finger domain 1 [Homo
           sapiens]
          Length = 332

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 188 AKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCK 226
           +K CV C+      VL PC+H  LC+ C     +CP C+
Sbjct: 271 SKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCR 309


>gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens]
          Length = 284

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 59  SSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDR 118
           ++  S  G ++   R Q DE K +I+  E   ++ K + +   R+ +E   +  + +SD 
Sbjct: 119 AADESERGMKVIESRAQKDEEKMEIQ--EIQLKEAKHIAEDADRKYEEVARKLVIIESDL 176

Query: 119 QLALQKKEEVEAQVKQLQEEL 139
           + A ++ E  E QV+QL+E+L
Sbjct: 177 ERAEERAELSEGQVRQLEEQL 197


>gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]
          Length = 284

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 59  SSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDR 118
           ++  S  G ++   R Q DE K +I+  E   ++ K + +   R+ +E   +  + +SD 
Sbjct: 119 AADESERGMKVIESRAQKDEEKMEIQ--EIQLKEAKHIAEDADRKYEEVARKLVIIESDL 176

Query: 119 QLALQKKEEVEAQVKQLQEEL 139
           + A ++ E  E QV+QL+E+L
Sbjct: 177 ERAEERAELSEGQVRQLEEQL 197



 Score = 29.3 bits (64), Expect = 3.0
 Identities = 12/49 (24%), Positives = 31/49 (63%)

Query: 93  VKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEELEG 141
           +K+     + + + A +RA  A++D++ A  + +++E ++  LQ++L+G
Sbjct: 4   IKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKG 52


>gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens]
          Length = 284

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 59  SSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDR 118
           ++  S  G ++   R Q DE K +I+  E   ++ K + +   R+ +E   +  + +SD 
Sbjct: 119 AADESERGMKVIESRAQKDEEKMEIQ--EIQLKEAKHIAEDADRKYEEVARKLVIIESDL 176

Query: 119 QLALQKKEEVEAQVKQLQEEL 139
           + A ++ E  E QV+QL+E+L
Sbjct: 177 ERAEERAELSEGQVRQLEEQL 197



 Score = 29.3 bits (64), Expect = 3.0
 Identities = 12/49 (24%), Positives = 31/49 (63%)

Query: 93  VKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEELEG 141
           +K+     + + + A +RA  A++D++ A  + +++E ++  LQ++L+G
Sbjct: 4   IKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKG 52


>gi|38788243 myosin regulatory light chain interacting protein [Homo
           sapiens]
          Length = 445

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 188 AKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCKGQ 228
           A  C+ C E    +   PC H + CE CAA    CP C+ +
Sbjct: 384 AMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSR 424


>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
            transmembrane signal), 1 [Homo sapiens]
          Length = 3259

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 9/119 (7%)

Query: 28   GLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSSSASP-------NGAELARVRRQLDEAK 80
            G   +PG   +    S S S  P  S   PS+ SA+P       +  E+    +Q+D+ K
Sbjct: 1789 GTQSIPGETEE--QDSLSMSTRPTCSESVPSAKSANPAVSKDFSSHDEINNYLQQIDQLK 1846

Query: 81   RKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEEL 139
             +I   EE  Q+ K+     + E      +    D + ++  ++  ++    +Q+QEEL
Sbjct: 1847 ERIAGLEEEKQKNKEFSQTLENEKNTLLSQISTKDGELKMLQEEVTKMNLLNQQIQEEL 1905



 Score = 31.2 bits (69), Expect = 0.79
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%)

Query: 76   LDEAKRKIRQWEESWQQVKQVCDAWQREAQE-AKERARVADSDRQLALQKKEEVEAQVKQ 134
            L +A+ K R   E  +Q K   +  Q +  E +KE   + D  RQL +Q +E ++ ++  
Sbjct: 1191 LKKAQEKERHLREELKQQKDDYNRLQEQFDEQSKENENIGDQLRQLQIQVRESIDGKLPS 1250

Query: 135  LQEELEGLGVASTLPGL 151
              ++       S+ PGL
Sbjct: 1251 TDQQES----CSSTPGL 1263



 Score = 28.9 bits (63), Expect = 3.9
 Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 7/69 (10%)

Query: 72  VRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQ 131
           ++++L   +RK+ + EES     QV D  Q+E   A++R        Q+  Q+ +++EA+
Sbjct: 250 MQQKLRVLQRKLEEHEESLVGRAQVVDLLQQELTAAEQR-------NQILSQQLQQMEAE 302

Query: 132 VKQLQEELE 140
              L+  +E
Sbjct: 303 HNTLRNTVE 311



 Score = 28.5 bits (62), Expect = 5.1
 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 72   VRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQ 131
            VR++  E   K+R  E + ++ ++     ++E +E KE+ R     +Q   QK  E+E +
Sbjct: 1639 VRQEKQELYGKLRSTEANKKETEKQLQEAEQEMEEMKEKMRKFAKSKQ---QKILELEEE 1695

Query: 132  VKQLQEELEGLG 143
              +L+ E+   G
Sbjct: 1696 NDRLRAEVHPAG 1707


>gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo
           sapiens]
          Length = 1638

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query: 68  ELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEE 127
           E   VR++LD+A R+I+ +E+  + ++Q  +   +     +  A  A  DR+L    +E+
Sbjct: 515 EANAVRQELDDAFRQIKAYEKQIKTLQQEREDLNKLEVHTEALAAEASKDRKL----REQ 570

Query: 128 VEAQVKQLQEELEGL 142
            E   KQL+ ELEGL
Sbjct: 571 SEHYSKQLENELEGL 585


>gi|21264330 mindbomb homolog 2 [Homo sapiens]
          Length = 1013

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 188 AKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCK 226
           A +C+ C E A   +  PCQH  +CE CA    +C  C+
Sbjct: 887 AAECLVCSELALLVLFSPCQHRTVCEECARRMKKCIRCQ 925


>gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo
           sapiens]
          Length = 497

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 17/59 (28%), Positives = 27/59 (45%)

Query: 167 SLQSQLRLDLEAVDGVIFQLRAKQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYC 225
           S Q+ L+ ++   + +      K C  C +R    V  PC H + C+ CA    +CP C
Sbjct: 426 SSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMC 484


>gi|30348954 mindbomb homolog 1 [Homo sapiens]
          Length = 1006

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 5/73 (6%)

Query: 154 CGDIGTIPLPKLHSLQSQLRLDLEAVDGVIFQLRAKQCVACRERAHGAVLRPCQHHILCE 213
           CG I T  L        +++  L   + V  + + ++CV C ++    + +PC H   CE
Sbjct: 834 CGHIATCSL-----CSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACE 888

Query: 214 PCAATAPECPYCK 226
            CA    +C  C+
Sbjct: 889 NCANLMKKCVQCR 901



 Score = 32.3 bits (72), Expect = 0.35
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 189 KQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCKGQ 228
           ++C+ C +     +  PC H   C  C+    +C  CK Q
Sbjct: 817 EECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQ 856


>gi|147902746 MEX3A protein [Homo sapiens]
          Length = 520

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 189 KQCVACRERAHGAVLRPCQHHILCEPCAA-----TAPECPYC 225
           + C+ C E    A L PC H++ C  CA      T PECP C
Sbjct: 467 RDCMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVC 508


>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
          Length = 387

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 31/159 (19%)

Query: 3   PPQQPPPLRSEPGTLGSAASSYSPLGLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSSSA 62
           PPQQPPP    P  LGSAAS+           S   F+         P+ +  P S+S +
Sbjct: 116 PPQQPPP--PPPQQLGSAASAPRT--------STSSFLIKDILGDSKPLAACAPYSTSVS 165

Query: 63  SPNGA---------ELARVRRQLDEAKRKIRQWEESWQQVK--QVCDAWQREAQEAKE-- 109
           SP+           E  R + + +++K K+ + E+S   +K     +   RE   ++E  
Sbjct: 166 SPHHTPKQESNAVHESFRPKLEQEDSKTKLDKREDSQSDIKCHGTKEEGDREITSSRESP 225

Query: 110 --------RARVADSDRQLALQKKEEVEAQVKQLQEELE 140
                   +AR A SD QL   ++     +   +Q+ ++
Sbjct: 226 PVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMD 264


>gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens]
          Length = 373

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 16/193 (8%)

Query: 39  FVSGSFSPSPSPILSAGPPSSSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCD 98
           F S   +PS +     G       +      A+V+ ++  A  +    ++      +  +
Sbjct: 180 FFSNYTAPSATMSSFQGELMDGDQTSRSGVPAQVQSEITSANTEDDDDDDDEDDDDEEEN 239

Query: 99  AWQREAQEAKERARVADSDRQLALQKKEEVEAQ-VKQLQEELEGLGVASTLPGLRGCGDI 157
           A  R    +KER R + SD    L   ++VE   V+QL+E L     A       GC + 
Sbjct: 240 AEDRNPGLSKERVRASLSD----LSSLDDVEGMSVRQLKEIL-----ARNFVNYSGCCEK 290

Query: 158 GTIPLPKLHSLQSQLRLDLEAVDGVIFQLRAKQ----CVACRERAHGAVLRPCQHHILCE 213
             + + K++ L  +   + ++  G   QL+ ++    C  C +     VL  C H + C 
Sbjct: 291 WEL-VEKVNRLYKENEENQKSY-GERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCT 348

Query: 214 PCAATAPECPYCK 226
            C     ECP C+
Sbjct: 349 KCGKRMSECPICR 361


>gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens]
          Length = 372

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 16/193 (8%)

Query: 39  FVSGSFSPSPSPILSAGPPSSSSASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCD 98
           F S   +PS +     G       +      A+V+ ++  A  +    ++      +  +
Sbjct: 179 FFSNYTAPSATMSSFQGELMDGDQTSRSGVPAQVQSEITSANTEDDDDDDDEDDDDEEEN 238

Query: 99  AWQREAQEAKERARVADSDRQLALQKKEEVEAQ-VKQLQEELEGLGVASTLPGLRGCGDI 157
           A  R    +KER R + SD    L   ++VE   V+QL+E L     A       GC + 
Sbjct: 239 AEDRNPGLSKERVRASLSD----LSSLDDVEGMSVRQLKEIL-----ARNFVNYSGCCEK 289

Query: 158 GTIPLPKLHSLQSQLRLDLEAVDGVIFQLRAKQ----CVACRERAHGAVLRPCQHHILCE 213
             + + K++ L  +   + ++  G   QL+ ++    C  C +     VL  C H + C 
Sbjct: 290 WEL-VEKVNRLYKENEENQKSY-GERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCT 347

Query: 214 PCAATAPECPYCK 226
            C     ECP C+
Sbjct: 348 KCGKRMSECPICR 360


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 19/111 (17%)

Query: 46  PSPSPILSAGPPSSSSASPNGA--------ELARVRRQLDEAKRKIRQWEESWQQVKQVC 97
           P+P+P ++   P + +     A          AR +R+ +E +R+++   +   + +Q+ 
Sbjct: 578 PAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRMREEQLA 637

Query: 98  -----------DAWQREAQEAKERARVADSDRQLALQKKEEVEAQVKQLQE 137
                      +A +RE QEA+E+A+    +++   ++KEE EA+ ++  E
Sbjct: 638 REAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAE 688



 Score = 36.6 bits (83), Expect = 0.019
 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 7/137 (5%)

Query: 2   TPPQQPPPLRSEPGTLGSAASSYSPLGLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSSS 61
           TPP  PP +++      + +S   PL      G +    +     SPS    +  P+  +
Sbjct: 47  TPPDTPPAMKN------ATSSKQLPLEPESPSGQVGPRPAPPQEESPSSEAKSRGPTPPA 100

Query: 62  ASPNGAELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLA 121
             P  A   R   Q             + Q+VK+  +  +   +  +ERA+   + + + 
Sbjct: 101 MGPRDARPPRRSSQPSPTAVPASDSPPTKQEVKKAGERHKLAKERREERAKYLAAKKAVW 160

Query: 122 LQKKEEVEA-QVKQLQE 137
           L+K+E+ +A + KQLQE
Sbjct: 161 LEKEEKAKALREKQLQE 177



 Score = 29.6 bits (65), Expect = 2.3
 Identities = 18/73 (24%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 70  ARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVE 129
           AR  R+ +  +R+ ++  E  Q  ++  +  Q++ +EA+ R+R  +++RQ  L++++  +
Sbjct: 642 ARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSR-EEAERQ-RLEREKHFQ 699

Query: 130 AQVKQLQEELEGL 142
            Q ++ QE  + L
Sbjct: 700 QQEQERQERRKRL 712


>gi|226495417 coiled-coil domain containing 102A [Homo sapiens]
          Length = 550

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 21/131 (16%)

Query: 41  SGSFSPSPSPILSAGPPSSSSASPNGAELARVR-RQLDEAKRKIRQ-------------- 85
           SG+ SP P P L   P  +  A  +      +R R+L+EA+ +  Q              
Sbjct: 44  SGTPSPGPPPALPLPPAPALLADGDWESREELRLRELEEARARAAQMEKTMRRWSDCTAN 103

Query: 86  WEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEELEGLGVA 145
           W E W +V+   +  + E ++ ++R      +   A ++++E + + +    EL      
Sbjct: 104 WREKWSKVRAERNRAREEVRQLRQRLDALTKELAGARRERQEAQGECEARGREL------ 157

Query: 146 STLPGLRGCGD 156
           + L G RG  D
Sbjct: 158 ARLRGARGVAD 168


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 68   ELARVRRQLD----EAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQ 123
            EL + RR+L+    +   +I + +    ++K      + E Q A  R     + + +AL+
Sbjct: 1045 ELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKNMALK 1104

Query: 124  KKEEVEAQVKQLQEELE 140
            K  E+E+Q+ +LQE+LE
Sbjct: 1105 KIRELESQISELQEDLE 1121



 Score = 37.4 bits (85), Expect = 0.011
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 7/81 (8%)

Query: 67   AELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAK-ERARVADSDRQ------ 119
            A    +  Q  E ++K++  E    Q+++   A +R  ++A+ ER  +AD          
Sbjct: 1659 ASREEILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEIANSSGKGA 1718

Query: 120  LALQKKEEVEAQVKQLQEELE 140
            LAL++K  +EA++ QL+EELE
Sbjct: 1719 LALEEKRRLEARIAQLEEELE 1739



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 16/75 (21%), Positives = 37/75 (49%)

Query: 68   ELARVRRQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEE 127
            +L  V  Q+D+ +R   Q+++   +        +R+ +EA+E A+ A++ R+   ++ E+
Sbjct: 1843 KLKDVLLQVDDERRNAEQYKDQADKASTRLKQLKRQLEEAEEEAQRANASRRKLQRELED 1902

Query: 128  VEAQVKQLQEELEGL 142
                   +  E+  L
Sbjct: 1903 ATETADAMNREVSSL 1917


>gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo
           sapiens]
          Length = 604

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 189 KQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCK 226
           + C  C ++    V  PC H ++C+ CA +  +CP C+
Sbjct: 555 RTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICR 592


>gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo
           sapiens]
          Length = 604

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 189 KQCVACRERAHGAVLRPCQHHILCEPCAATAPECPYCK 226
           + C  C ++    V  PC H ++C+ CA +  +CP C+
Sbjct: 555 RTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICR 592


>gi|28329422 acute myelogenous leukemia 1 translocation 1 protein
          isoform MTG8c [Homo sapiens]
          Length = 567

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 25/92 (27%)

Query: 1  MTPPQQPPPLRSE---------PGTLGSAASSYSPLGLNGVPGSIWDFVSGSFSPSPSPI 51
          +TPP  PPP  ++         P TL +  +S+SP  LNG             +PSP   
Sbjct: 14 LTPPTMPPPPTTQGAPRTSSFTPTTLTNG-TSHSPTALNG-------------APSPPNG 59

Query: 52 LSAGPPSSSSASPNGAEL--ARVRRQLDEAKR 81
           S GP SSSS+S    +L  A   RQL + KR
Sbjct: 60 FSNGPSSSSSSSLANQQLPPACGARQLSKLKR 91


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.131    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,180,151
Number of Sequences: 37866
Number of extensions: 584704
Number of successful extensions: 7318
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 572
Number of HSP's that attempted gapping in prelim test: 5547
Number of HSP's gapped (non-prelim): 2239
length of query: 232
length of database: 18,247,518
effective HSP length: 99
effective length of query: 133
effective length of database: 14,498,784
effective search space: 1928338272
effective search space used: 1928338272
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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