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Search of human proteins with 148228293
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148228293 hypothetical protein LOC285016 [Homo sapiens]
(152 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148228293 hypothetical protein LOC285016 [Homo sapiens] 315 1e-86
gi|46409458 hypothetical protein LOC389658 [Homo sapiens] 122 1e-28
gi|15011902 synaptotagmin-like 2 isoform a [Homo sapiens] 32 0.21
gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens] 32 0.21
gi|244790013 synaptotagmin-like 2 isoform g [Homo sapiens] 32 0.21
gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo sap... 31 0.46
gi|239756382 PREDICTED: similar to KIAA1920 protein [Homo sapiens] 29 1.8
gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo sap... 29 1.8
gi|223941839 abhydrolase domain containing 11 isoform 8 [Homo sa... 29 1.8
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ... 28 2.3
gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo ... 28 2.3
gi|221625422 ephrin receptor EphA5 isoform b precursor [Homo sap... 28 3.0
gi|221625401 ephrin receptor EphA5 isoform a precursor [Homo sap... 28 3.0
gi|66346708 membrane associated guanylate kinase, WW and PDZ dom... 28 3.9
gi|74272284 membrane associated guanylate kinase, WW and PDZ dom... 28 3.9
gi|74272282 membrane associated guanylate kinase, WW and PDZ dom... 28 3.9
gi|163644316 hypothetical protein LOC23255 [Homo sapiens] 28 3.9
gi|239755567 PREDICTED: similar to protein phosphatase 1 regulat... 27 5.1
gi|169171345 PREDICTED: hypothetical protein [Homo sapiens] 27 5.1
gi|169172205 PREDICTED: hypothetical protein [Homo sapiens] 27 5.1
gi|169170949 PREDICTED: hypothetical protein [Homo sapiens] 27 5.1
gi|239508745 PREDICTED: hypothetical protein [Homo sapiens] 27 5.1
gi|20162550 protein phosphatase 1 regulatory subunit 14B [Homo s... 27 5.1
gi|222831660 family with sequence similarity 171, member A2 [Hom... 27 6.7
gi|194328809 latent transforming growth factor beta binding prot... 27 6.7
gi|18497288 latent transforming growth factor beta binding prote... 27 6.7
gi|192448443 FK506 binding protein 10 [Homo sapiens] 27 6.7
gi|39995084 integrator complex subunit 3 [Homo sapiens] 27 6.7
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 27 8.8
gi|239756545 PREDICTED: hypothetical protein XP_002344931 [Homo ... 27 8.8
>gi|148228293 hypothetical protein LOC285016 [Homo sapiens]
Length = 152
Score = 315 bits (806), Expect = 1e-86
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MRGPGHPLLLGLLLVLGAAGRGRGGAEPREPADGQALLRLVVELVQELRKHHSAEHKGLQ 60
MRGPGHPLLLGLLLVLGAAGRGRGGAEPREPADGQALLRLVVELVQELRKHHSAEHKGLQ
Sbjct: 1 MRGPGHPLLLGLLLVLGAAGRGRGGAEPREPADGQALLRLVVELVQELRKHHSAEHKGLQ 60
Query: 61 LLGRDCALGRAEAAGLGPSPEQRVEIVPRDLRMKDKFLKHLTGPLYFSPKCSKHFHRLYH 120
LLGRDCALGRAEAAGLGPSPEQRVEIVPRDLRMKDKFLKHLTGPLYFSPKCSKHFHRLYH
Sbjct: 61 LLGRDCALGRAEAAGLGPSPEQRVEIVPRDLRMKDKFLKHLTGPLYFSPKCSKHFHRLYH 120
Query: 121 NTRDCTIPAYYKRCARLLTRLAVSPVCMEDKQ 152
NTRDCTIPAYYKRCARLLTRLAVSPVCMEDKQ
Sbjct: 121 NTRDCTIPAYYKRCARLLTRLAVSPVCMEDKQ 152
>gi|46409458 hypothetical protein LOC389658 [Homo sapiens]
Length = 129
Score = 122 bits (306), Expect = 1e-28
Identities = 54/79 (68%), Positives = 64/79 (81%)
Query: 71 AEAAGLGPSPEQRVEIVPRDLRMKDKFLKHLTGPLYFSPKCSKHFHRLYHNTRDCTIPAY 130
A AG PS + EI PRD +KDKF+KH TGP+ FSP+CSKHFHRLY+NTR+C+ PAY
Sbjct: 50 AAGAGRTPSGSRSAEIFPRDSNLKDKFIKHFTGPVTFSPECSKHFHRLYYNTRECSTPAY 109
Query: 131 YKRCARLLTRLAVSPVCME 149
YKRCARLLTRLAVSP+C +
Sbjct: 110 YKRCARLLTRLAVSPLCSQ 128
>gi|15011902 synaptotagmin-like 2 isoform a [Homo sapiens]
Length = 910
Score = 32.0 bits (71), Expect = 0.21
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 59 LQLLGRDCALGRAEAAGLGPSPEQRVEIVPRDLRMKDKFLKHLTGPLYFSPKCSKHFHRL 118
+++L RD AL RAE E+RV +P ++ D+ LK+++G ++ K +H ++
Sbjct: 16 MKVLQRDAALKRAE--------EERVRHLPEKIK-DDQQLKNMSGQWFYEAKAKRHRDKI 66
Query: 119 Y 119
+
Sbjct: 67 H 67
>gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens]
Length = 935
Score = 32.0 bits (71), Expect = 0.21
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 59 LQLLGRDCALGRAEAAGLGPSPEQRVEIVPRDLRMKDKFLKHLTGPLYFSPKCSKHFHRL 118
+++L RD AL RAE E+RV +P ++ D+ LK+++G ++ K +H ++
Sbjct: 16 MKVLQRDAALKRAE--------EERVRHLPEKIK-DDQQLKNMSGQWFYEAKAKRHRDKI 66
Query: 119 Y 119
+
Sbjct: 67 H 67
>gi|244790013 synaptotagmin-like 2 isoform g [Homo sapiens]
Length = 934
Score = 32.0 bits (71), Expect = 0.21
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 59 LQLLGRDCALGRAEAAGLGPSPEQRVEIVPRDLRMKDKFLKHLTGPLYFSPKCSKHFHRL 118
+++L RD AL RAE E+RV +P ++ D+ LK+++G ++ K +H ++
Sbjct: 16 MKVLQRDAALKRAE--------EERVRHLPEKIK-DDQQLKNMSGQWFYEAKAKRHRDKI 66
Query: 119 Y 119
+
Sbjct: 67 H 67
>gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo
sapiens]
Length = 308
Score = 30.8 bits (68), Expect = 0.46
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 3 GPGHPLLLGLLLVLGAAGRGRGGAEPREPADGQALLRLVV---ELVQELRKHHSAEHKGL 59
GP P + + ++ GRGGAEPR DG+A L VV L +S
Sbjct: 25 GPHGPSFARVPVAPSSSSGGRGGAEPR-LLDGEAALPAVVFLHGLFGSKTNFNSIAKILA 83
Query: 60 QLLGRDCALGRAEAAGLGP-SPEQRVEIVPRDLR 92
Q GR A G P SP+ EI+ +DL+
Sbjct: 84 QQTGRRVLTVDARNHGDSPHSPDMSYEIMSQDLQ 117
>gi|239756382 PREDICTED: similar to KIAA1920 protein [Homo sapiens]
Length = 483
Score = 28.9 bits (63), Expect = 1.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 93 MKDKFLKHLTGPLYFSPKCSKHFH 116
++D F H+T P YFSP C+ H
Sbjct: 386 VEDTFCFHVTAPPYFSPLCTFSIH 409
>gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo
sapiens]
Length = 315
Score = 28.9 bits (63), Expect = 1.8
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
Query: 3 GPGHPLLLGLLLVLGAAGRGRGGAEPR------EPADGQALLRLVV---ELVQELRKHHS 53
GP P + + ++ GRGGAEPR DG+A L VV L +S
Sbjct: 25 GPHGPSFARVPVAPSSSSGGRGGAEPRPLPLSYRLLDGEAALPAVVFLHGLFGSKTNFNS 84
Query: 54 AEHKGLQLLGRDCALGRAEAAGLGP-SPEQRVEIVPRDLR 92
Q GR A G P SP+ EI+ +DL+
Sbjct: 85 IAKILAQQTGRRVLTVDARNHGDSPHSPDMSYEIMSQDLQ 124
>gi|223941839 abhydrolase domain containing 11 isoform 8 [Homo
sapiens]
Length = 258
Score = 28.9 bits (63), Expect = 1.8
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
Query: 3 GPGHPLLLGLLLVLGAAGRGRGGAEPR------EPADGQALLRLVV---ELVQELRKHHS 53
GP P + + ++ GRGGAEPR DG+A L VV L +S
Sbjct: 25 GPHGPSFARVPVAPSSSSGGRGGAEPRPLPLSYRLLDGEAALPAVVFLHGLFGSKTNFNS 84
Query: 54 AEHKGLQLLGRDCALGRAEAAGLGP-SPEQRVEIVPRDLR 92
Q GR A G P SP+ EI+ +DL+
Sbjct: 85 IAKILAQQTGRRVLTVDARNHGDSPHSPDMSYEIMSQDLQ 124
>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
sapiens]
Length = 321
Score = 28.5 bits (62), Expect = 2.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 3 GPGHPLLLGLLLVLG-AAGRGRGGAEPREPADGQA 36
GP P L GL L+LG G GA+ +PA+G A
Sbjct: 11 GPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDA 45
>gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo
sapiens]
Length = 231
Score = 28.5 bits (62), Expect = 2.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 3 GPGHPLLLGLLLVLG-AAGRGRGGAEPREPADGQA 36
GP P L GL L+LG G GA+ +PA+G A
Sbjct: 11 GPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDA 45
>gi|221625422 ephrin receptor EphA5 isoform b precursor [Homo
sapiens]
Length = 1015
Score = 28.1 bits (61), Expect = 3.0
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 90 DLRMKDKFLKHLTGPLYFSPKCSKHFHRLYHNTRDC----TIPAYYKRCARLLTRLAVSP 145
+L + D+ +K T P K F+ + + C ++ YYK+C ++ LAV P
Sbjct: 185 ELDLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVGACIALVSVRVYYKKCPSVVRHLAVFP 244
>gi|221625401 ephrin receptor EphA5 isoform a precursor [Homo
sapiens]
Length = 1037
Score = 28.1 bits (61), Expect = 3.0
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 90 DLRMKDKFLKHLTGPLYFSPKCSKHFHRLYHNTRDC----TIPAYYKRCARLLTRLAVSP 145
+L + D+ +K T P K F+ + + C ++ YYK+C ++ LAV P
Sbjct: 185 ELDLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVGACIALVSVRVYYKKCPSVVRHLAVFP 244
>gi|66346708 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform b [Homo sapiens]
Length = 1256
Score = 27.7 bits (60), Expect = 3.9
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 8/54 (14%)
Query: 4 PGHPLLLGLLLVLGAA---GRGRGGAE----PREPADGQALLRLVVELVQELRK 50
PG P+ +G ++ LGAA GR R G E P G++ +LVV+L+Q+ K
Sbjct: 861 PGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKS-HQLVVQLMQQAAK 913
>gi|74272284 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform c [Homo sapiens]
Length = 1462
Score = 27.7 bits (60), Expect = 3.9
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 8/54 (14%)
Query: 4 PGHPLLLGLLLVLGAA---GRGRGGAE----PREPADGQALLRLVVELVQELRK 50
PG P+ +G ++ LGAA GR R G E P G++ +LVV+L+Q+ K
Sbjct: 833 PGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKS-HQLVVQLMQQAAK 885
>gi|74272282 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform a [Homo sapiens]
Length = 1287
Score = 27.7 bits (60), Expect = 3.9
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 8/54 (14%)
Query: 4 PGHPLLLGLLLVLGAA---GRGRGGAE----PREPADGQALLRLVVELVQELRK 50
PG P+ +G ++ LGAA GR R G E P G++ +LVV+L+Q+ K
Sbjct: 861 PGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKS-HQLVVQLMQQAAK 913
>gi|163644316 hypothetical protein LOC23255 [Homo sapiens]
Length = 1586
Score = 27.7 bits (60), Expect = 3.9
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 46 QELRKHHSAEHKGLQLLGRDCALGRAE----AAGLGPSPEQRVEIVPRDLR 92
Q LR H E GL++L A+ R + A G GP P R P D +
Sbjct: 1177 QPLRSHVLTEQSGLRVLHSPPAVRRVDSITAAGGEGPFPTSRARGSPGDTK 1227
>gi|239755567 PREDICTED: similar to protein phosphatase 1
regulatory subunit 14B [Homo sapiens]
Length = 147
Score = 27.3 bits (59), Expect = 5.1
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 17 GAAGRGRGGAEPREPADGQALLRLVVELVQELRKHHSAEHKGLQLLGR--DC 66
GAAG G GGA+ P Q + + + +ELRK + E L+ L R DC
Sbjct: 35 GAAGEGPGGADDEGPVRRQGKVTVKYDR-KELRKRLNLEEWILEQLTRLYDC 85
>gi|169171345 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 27.3 bits (59), Expect = 5.1
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 63 GRDCALGRAEAAGLGPSPEQRVEIVPRDLRMKDKFLKHLTGPLYFSPKCSKHF 115
GR C+ G A A+G+G ++ + +P +L + LY C H+
Sbjct: 177 GRGCSRGSATASGVGGKAIKKAQRIPAELYL-----------LYIHVNCCHHY 218
>gi|169172205 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 27.3 bits (59), Expect = 5.1
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 63 GRDCALGRAEAAGLGPSPEQRVEIVPRDLRMKDKFLKHLTGPLYFSPKCSKHF 115
GR C+ G A A+G+G ++ + +P +L + LY C H+
Sbjct: 177 GRGCSRGSATASGVGGKAIKKAQRIPAELYL-----------LYIHVNCCHHY 218
>gi|169170949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 27.3 bits (59), Expect = 5.1
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 63 GRDCALGRAEAAGLGPSPEQRVEIVPRDLRMKDKFLKHLTGPLYFSPKCSKHF 115
GR C+ G A A+G+G ++ + +P +L + LY C H+
Sbjct: 177 GRGCSRGSATASGVGGKAIKKAQRIPAELYL-----------LYIHVNCCHHY 218
>gi|239508745 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 27.3 bits (59), Expect = 5.1
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 63 GRDCALGRAEAAGLGPSPEQRVEIVPRDLRMKDKFLKHLTGPLYFSPKCSKHF 115
GR C+ G A A+G+G ++ + +P +L + LY C H+
Sbjct: 177 GRGCSRGSATASGVGGKAIKKAQRIPAELYL-----------LYIHVNCCHHY 218
>gi|20162550 protein phosphatase 1 regulatory subunit 14B [Homo
sapiens]
Length = 147
Score = 27.3 bits (59), Expect = 5.1
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 17 GAAGRGRGGAEPREPADGQALLRLVVELVQELRKHHSAEHKGLQLLGR--DC 66
GAAG G GGA+ P Q + + + +ELRK + E L+ L R DC
Sbjct: 35 GAAGEGPGGADDEGPVRRQGKVTVKYDR-KELRKRLNLEEWILEQLTRLYDC 85
>gi|222831660 family with sequence similarity 171, member A2 [Homo
sapiens]
Length = 826
Score = 26.9 bits (58), Expect = 6.7
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 9 LLGLLLVLGAAGRGRGGAEPREPADGQALLRLVVELVQEL 48
LLGLLL G+A R G + P P+ + L+++ V + EL
Sbjct: 16 LLGLLL--GSASRAPGKSPPEPPSPQEILIKVQVYVSGEL 53
>gi|194328809 latent transforming growth factor beta binding
protein 3 isoform 1 [Homo sapiens]
Length = 1303
Score = 26.9 bits (58), Expect = 6.7
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 1 MRGPGHP-----LLLGLLLVLGAAGRGRGG-AEPREPADGQALLR 39
MRG G LLL LLL+LG GR GG A R G AL R
Sbjct: 15 MRGAGAAGLLALLLLLLLLLLGLGGRVEGGPAGERGAGGGGALAR 59
>gi|18497288 latent transforming growth factor beta binding
protein 3 isoform 2 [Homo sapiens]
Length = 1256
Score = 26.9 bits (58), Expect = 6.7
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 1 MRGPGHP-----LLLGLLLVLGAAGRGRGG-AEPREPADGQALLR 39
MRG G LLL LLL+LG GR GG A R G AL R
Sbjct: 15 MRGAGAAGLLALLLLLLLLLLGLGGRVEGGPAGERGAGGGGALAR 59
>gi|192448443 FK506 binding protein 10 [Homo sapiens]
Length = 582
Score = 26.9 bits (58), Expect = 6.7
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 7 PLLLGLLLVLGAAGRGRGGAEP 28
PLL LLLV+ A GRG G A P
Sbjct: 15 PLLQLLLLVVQAVGRGLGRASP 36
>gi|39995084 integrator complex subunit 3 [Homo sapiens]
Length = 1042
Score = 26.9 bits (58), Expect = 6.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 17 GAAGRGRGGAEPREPADGQALLRLVVELVQELRK 50
GAAG G GGA P G+ LL ++ EL +
Sbjct: 17 GAAGGGGGGAGAGAPGGGRLLLSTSLDAKDELEE 50
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 26.6 bits (57), Expect = 8.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 22 GRGGAEPREPADGQALLRLVVELVQELRKHHSAEHKGLQLLGR 64
GRGG + PA AL +L V +L++H S+ +L G+
Sbjct: 939 GRGGRQGPSPAFHCALCQLQVNSETQLKQHMSSRRHKDRLAGK 981
>gi|239756545 PREDICTED: hypothetical protein XP_002344931 [Homo
sapiens]
Length = 427
Score = 26.6 bits (57), Expect = 8.8
Identities = 17/48 (35%), Positives = 21/48 (43%)
Query: 48 LRKHHSAEHKGLQLLGRDCALGRAEAAGLGPSPEQRVEIVPRDLRMKD 95
+ AE +GL+ GR A GRA A G P P + R R D
Sbjct: 1 MASRRGAETRGLRRWGRLAAGGRAAARGSVPQPVKSSPPFRRSARPTD 48
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.142 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,908,004
Number of Sequences: 37866
Number of extensions: 315359
Number of successful extensions: 945
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 930
Number of HSP's gapped (non-prelim): 40
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.