Guide to the Human Genome
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Name: FAM150A Sequence: fasta or formatted (129aa) NCBI GI: 46409458
Description:

hypothetical protein LOC389658

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         13           2
 C cysteine            3.1          4           1
 D aspartate           2.3          3           1
 E glutamate           3.1          4           1
 F phenylalanine       5.4          7           1
 G glycine             7.0          9           1
 H histidine           3.9          5           1
 I isoleucine          1.6          2           1
 K lysine              6.2          8           1
 L leucine            12.4         16           2
 M methionine          0.8          1           1
 N asparagine          1.6          2           1
 P proline            11.6         15           1
 Q glutamine           0.8          1           1
 R arginine           10.9         14           2
 S serine              7.8         10           1
 T threonine           6.2          8           1
 V valine              2.3          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.1          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC389658 
FAM150B               0.396   hypothetical protein LOC285016 
TNK2                  0.024   tyrosine kinase, non-receptor, 2 isoform 1 
TNK2                  0.024   tyrosine kinase, non-receptor, 2 isoform 2 
CRLF1                 0.024   cytokine receptor-like factor 1 
MYO1G                 0.020   myosin IG 
OLAH                  0.020   oleoyl-ACP hydrolase isoform 2 
OLAH                  0.020   oleoyl-ACP hydrolase isoform 1 
PCBP4                 0.016   poly(rC) binding protein 4 isoform a 
PCBP4                 0.016   poly(rC) binding protein 4 isoform c 
PCBP4                 0.016   poly(rC) binding protein 4 isoform c 
GRB14                 0.012   growth factor receptor-bound protein 14 
CLEC17A               0.012   C-type lectin domain family 17, member A 
LOC100128392          0.012   PREDICTED: hypothetical protein 
LOC100128392          0.012   PREDICTED: hypothetical protein 
LOC100128392          0.012   PREDICTED: hypothetical protein 
AGAP2                 0.012   centaurin, gamma 1 isoform PIKE-L 
ELK1                  0.012   ELK1 protein 
ELK1                  0.012   ELK1 protein 
LOC100292113          0.012   PREDICTED: hypothetical protein XP_002345530 
LOC100290048          0.012   PREDICTED: hypothetical protein XP_002348148 
LOC100288945          0.012   PREDICTED: hypothetical protein XP_002343821 
PLXNC1                0.012   plexin C1 
CDAN1                 0.012   codanin 1 
EPHA5                 0.008   ephrin receptor EphA5 isoform b precursor 
EPHA5                 0.008   ephrin receptor EphA5 isoform a precursor 
LOC100133142          0.008   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.008   PREDICTED: similar to zinc finger protein 208 [Homo...
TRIP12                0.008   thyroid hormone receptor interactor 12 
RPL3L                 0.008   ribosomal protein L3-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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