Search of human proteins with 148227842

Search of human proteins with 148227842

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148227842 Myb-like, SWIRM and MPN domains 1 [Homo sapiens]
         (828 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148227842 Myb-like, SWIRM and MPN domains 1 [Homo sapiens]        1681   0.0  
gi|31542699 MPN domain containing isoform 1 [Homo sapiens]            100   7e-21
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re...    68   3e-11
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re...    68   3e-11
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r...    68   3e-11
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r...    65   3e-10
gi|229577180 MPN domain containing isoform 2 [Homo sapiens]            62   3e-09
gi|5031981 proteasome 26S subunit, non-ATPase 14 [Homo sapiens]        53   1e-06
gi|29789072 zinc finger, ZZ-type containing 3 [Homo sapiens]           52   2e-06
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]             52   2e-06
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    51   5e-06
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    49   2e-05
gi|209977080 REST corepressor 3 isoform a [Homo sapiens]               46   2e-04
gi|8922733 REST corepressor 3 isoform d [Homo sapiens]                 46   2e-04
gi|112807226 hypothetical protein LOC91748 [Homo sapiens]              44   6e-04
gi|44890062 hypothetical protein LOC91748 [Homo sapiens]               44   6e-04
gi|7661892 REST corepressor 1 [Homo sapiens]                           44   8e-04
gi|209977084 REST corepressor 3 isoform c [Homo sapiens]               43   0.001
gi|71061468 centromere protein E [Homo sapiens]                        42   0.002
gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform...    41   0.005
gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform...    41   0.005
gi|239735492 v-myb myeloblastosis viral oncogene homolog isoform...    41   0.005
gi|239735490 v-myb myeloblastosis viral oncogene homolog isoform...    41   0.005
gi|239735488 v-myb myeloblastosis viral oncogene homolog isoform...    41   0.005
gi|46361980 v-myb myeloblastosis viral oncogene homolog isoform ...    41   0.005
gi|194328729 v-myb myeloblastosis viral oncogene homolog isoform...    41   0.005
gi|194328727 v-myb myeloblastosis viral oncogene homolog isoform...    41   0.005
gi|64762484 BRCA1/BRCA2-containing complex, subunit 3 isoform 2 ...    40   0.007
gi|13236583 BRCA1/BRCA2-containing complex, subunit 3 isoform 1 ...    40   0.007
gi|221139773 v-myb myeloblastosis viral oncogene homolog (avian)...    40   0.009

>gi|148227842 Myb-like, SWIRM and MPN domains 1 [Homo sapiens]
          Length = 828

 Score = 1681 bits (4353), Expect = 0.0
 Identities = 828/828 (100%), Positives = 828/828 (100%)

Query: 1   MAAEEADVDIEGDVVAAAGAQPGSGENTASVLQKDHYLDSSWRTENGLIPWTLDNTISEE 60
           MAAEEADVDIEGDVVAAAGAQPGSGENTASVLQKDHYLDSSWRTENGLIPWTLDNTISEE
Sbjct: 1   MAAEEADVDIEGDVVAAAGAQPGSGENTASVLQKDHYLDSSWRTENGLIPWTLDNTISEE 60

Query: 61  NRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKSLQKTAKIMVHSPTKPASYSVK 120
           NRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKSLQKTAKIMVHSPTKPASYSVK
Sbjct: 61  NRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKSLQKTAKIMVHSPTKPASYSVK 120

Query: 121 WTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDKETPNQKT 180
           WTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDKETPNQKT
Sbjct: 121 WTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDKETPNQKT 180

Query: 181 GHNLQVKNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEEVDITDEVDELSSQTPQKN 240
           GHNLQVKNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEEVDITDEVDELSSQTPQKN
Sbjct: 181 GHNLQVKNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEEVDITDEVDELSSQTPQKN 240

Query: 241 SSSDLLLDFPNSKMHETNQGEFITSDSQEALFSKSSRGCLQNEKQDETLSSSEITLWTEK 300
           SSSDLLLDFPNSKMHETNQGEFITSDSQEALFSKSSRGCLQNEKQDETLSSSEITLWTEK
Sbjct: 241 SSSDLLLDFPNSKMHETNQGEFITSDSQEALFSKSSRGCLQNEKQDETLSSSEITLWTEK 300

Query: 301 QSNGDKKSIELNDQKFNELIKNCNKHDGRGIIVDARQLPSPEPCEIQKNLNDNEMLFHSC 360
           QSNGDKKSIELNDQKFNELIKNCNKHDGRGIIVDARQLPSPEPCEIQKNLNDNEMLFHSC
Sbjct: 301 QSNGDKKSIELNDQKFNELIKNCNKHDGRGIIVDARQLPSPEPCEIQKNLNDNEMLFHSC 360

Query: 361 QMVEESHEEEELKPPEQEIEIDRNIIQEEEKQAIPEFFEGRQAKTPERYLKIRNYILDQW 420
           QMVEESHEEEELKPPEQEIEIDRNIIQEEEKQAIPEFFEGRQAKTPERYLKIRNYILDQW
Sbjct: 361 QMVEESHEEEELKPPEQEIEIDRNIIQEEEKQAIPEFFEGRQAKTPERYLKIRNYILDQW 420

Query: 421 EICKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQAVYNRPQTVDKVRIR 480
           EICKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQAVYNRPQTVDKVRIR
Sbjct: 421 EICKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQAVYNRPQTVDKVRIR 480

Query: 481 DRKDAVEAYQLAQRLQSMRTRRRRVRDPWGNWCDAKDLEGQTFEHLSAEELAKRREEEKG 540
           DRKDAVEAYQLAQRLQSMRTRRRRVRDPWGNWCDAKDLEGQTFEHLSAEELAKRREEEKG
Sbjct: 481 DRKDAVEAYQLAQRLQSMRTRRRRVRDPWGNWCDAKDLEGQTFEHLSAEELAKRREEEKG 540

Query: 541 RPVKSLKVPRPTKSSFDPFQLIPCNFFSEEKQEPFQVKVASEALLIMDLHAHVSMAEVIG 600
           RPVKSLKVPRPTKSSFDPFQLIPCNFFSEEKQEPFQVKVASEALLIMDLHAHVSMAEVIG
Sbjct: 541 RPVKSLKVPRPTKSSFDPFQLIPCNFFSEEKQEPFQVKVASEALLIMDLHAHVSMAEVIG 600

Query: 601 LLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPVSQTQASETLAVRGFSVIGWYHSHPA 660
           LLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPVSQTQASETLAVRGFSVIGWYHSHPA
Sbjct: 601 LLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPVSQTQASETLAVRGFSVIGWYHSHPA 660

Query: 661 FDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRNNPLPYSQITCLVISEEISPDGS 720
           FDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRNNPLPYSQITCLVISEEISPDGS
Sbjct: 661 FDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRNNPLPYSQITCLVISEEISPDGS 720

Query: 721 YRLPYKFEVQQMLEEPQWGLVFEKTRWIIEKYRLSHSSVPMDKIFRRDSDLTCLQKLLEC 780
           YRLPYKFEVQQMLEEPQWGLVFEKTRWIIEKYRLSHSSVPMDKIFRRDSDLTCLQKLLEC
Sbjct: 721 YRLPYKFEVQQMLEEPQWGLVFEKTRWIIEKYRLSHSSVPMDKIFRRDSDLTCLQKLLEC 780

Query: 781 MRKTLSKVTNCFMAEEFLTEIENLFLSNYKSNQENGVTEENCTKELLM 828
           MRKTLSKVTNCFMAEEFLTEIENLFLSNYKSNQENGVTEENCTKELLM
Sbjct: 781 MRKTLSKVTNCFMAEEFLTEIENLFLSNYKSNQENGVTEENCTKELLM 828


>gi|31542699 MPN domain containing isoform 1 [Homo sapiens]
          Length = 471

 Score =  100 bits (248), Expect = 7e-21
 Identities = 54/146 (36%), Positives = 82/146 (56%), Gaps = 5/146 (3%)

Query: 565 NFFSEEKQEPFQVKVASEALLIMDLHAHVSMAEVIGLLGGRYSEVDKVVEVCAAEPCNSL 624
           +F +  K +PF V V+S  L ++D H+H++ +EV+G LGGR+    +++ V  A PC S 
Sbjct: 260 SFAAINKFQPFNVAVSSNVLFLLDFHSHLTRSEVVGYLGGRWDVNSQMLTVLRAFPCRSR 319

Query: 625 STGLQCEMDPVSQTQASETLAVRGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYF---S 681
                 E     + +  ++L +RG S++GWYHSHP     PSL+DID Q  YQ      S
Sbjct: 320 LG--DAETAAAIEEEIYQSLFLRGLSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSS 377

Query: 682 RGGAKFIGMIVSPYNRNNPLPYSQIT 707
            G    + ++ SPY   NP P S+I+
Sbjct: 378 NGFQPCLALLCSPYYSGNPGPESKIS 403


>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin c2 isoform b [Homo sapiens]
          Length = 1130

 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 37/208 (17%)

Query: 272 FSKSSRGCLQNEKQDETLSSSE---------ITLWTEKQSNGDKKSI--------ELNDQ 314
           ++KS RG  + E++D T    E         +TL     +  D +S         +L++Q
Sbjct: 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQ 383

Query: 315 KFNELIKNCNKHDGRGIIVDARQLPSPEPCEIQKNLNDNEMLFHSCQMVEESHEEEELKP 374
           +   +       D         Q  +P+               H   + E++H    +  
Sbjct: 384 EDESMETTGKDEDENSTGNKGEQTKNPD--------------LHEDNVTEQTHH---III 426

Query: 375 PEQEIEIDRNIIQEEEKQAIPEFFEGR-QAKTPERYLKIRNYILDQWEICKPKYLNKTSV 433
           P      D N +   E++A+PEFF G+ ++KTPE YL  RN+++D + +   +YL  T+ 
Sbjct: 427 PSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTAC 486

Query: 434 RPGLKNCGDVNCIGRIHTYLELIGAINF 461
           R  L   GDV  I R+H +LE  G IN+
Sbjct: 487 RRNL--AGDVCAIMRVHAFLEQWGLINY 512



 Score = 30.4 bits (67), Expect = 7.0
 Identities = 14/37 (37%), Positives = 22/37 (59%)

Query: 115 ASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRT 151
           AS + +WT +E  L  + L  +   W K+S+ +GSRT
Sbjct: 626 ASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 662


>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin c2 isoform a [Homo sapiens]
          Length = 1214

 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 37/208 (17%)

Query: 272 FSKSSRGCLQNEKQDETLSSSE---------ITLWTEKQSNGDKKSI--------ELNDQ 314
           ++KS RG  + E++D T    E         +TL     +  D +S         +L++Q
Sbjct: 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQ 383

Query: 315 KFNELIKNCNKHDGRGIIVDARQLPSPEPCEIQKNLNDNEMLFHSCQMVEESHEEEELKP 374
           +   +       D         Q  +P+               H   + E++H    +  
Sbjct: 384 EDESMETTGKDEDENSTGNKGEQTKNPD--------------LHEDNVTEQTHH---III 426

Query: 375 PEQEIEIDRNIIQEEEKQAIPEFFEGR-QAKTPERYLKIRNYILDQWEICKPKYLNKTSV 433
           P      D N +   E++A+PEFF G+ ++KTPE YL  RN+++D + +   +YL  T+ 
Sbjct: 427 PSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTAC 486

Query: 434 RPGLKNCGDVNCIGRIHTYLELIGAINF 461
           R  L   GDV  I R+H +LE  G IN+
Sbjct: 487 RRNL--AGDVCAIMRVHAFLEQWGLINY 512



 Score = 30.4 bits (67), Expect = 7.0
 Identities = 14/37 (37%), Positives = 22/37 (59%)

Query: 115 ASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRT 151
           AS + +WT +E  L  + L  +   W K+S+ +GSRT
Sbjct: 595 ASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 631


>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin c2 isoform c [Homo sapiens]
          Length = 1152

 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 37/208 (17%)

Query: 272 FSKSSRGCLQNEKQDETLSSSE---------ITLWTEKQSNGDKKSI--------ELNDQ 314
           ++KS RG  + E++D T    E         +TL     +  D +S         +L++Q
Sbjct: 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQ 383

Query: 315 KFNELIKNCNKHDGRGIIVDARQLPSPEPCEIQKNLNDNEMLFHSCQMVEESHEEEELKP 374
           +   +       D         Q  +P+               H   + E++H    +  
Sbjct: 384 EDESMETTGKDEDENSTGNKGEQTKNPD--------------LHEDNVTEQTHH---III 426

Query: 375 PEQEIEIDRNIIQEEEKQAIPEFFEGR-QAKTPERYLKIRNYILDQWEICKPKYLNKTSV 433
           P      D N +   E++A+PEFF G+ ++KTPE YL  RN+++D + +   +YL  T+ 
Sbjct: 427 PSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTAC 486

Query: 434 RPGLKNCGDVNCIGRIHTYLELIGAINF 461
           R  L   GDV  I R+H +LE  G IN+
Sbjct: 487 RRNL--AGDVCAIMRVHAFLEQWGLINY 512



 Score = 30.4 bits (67), Expect = 7.0
 Identities = 14/37 (37%), Positives = 22/37 (59%)

Query: 115 ASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRT 151
           AS + +WT +E  L  + L  +   W K+S+ +GSRT
Sbjct: 626 ASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 662


>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin c1 [Homo sapiens]
          Length = 1105

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 3/81 (3%)

Query: 382 DRNIIQEEEKQAIPEFFEGR-QAKTPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNC 440
           D N I   E++A+PEFF G+ ++KTPE YL  RN+++D + +   +YL  T+ R  L   
Sbjct: 459 DYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNL--T 516

Query: 441 GDVNCIGRIHTYLELIGAINF 461
           GDV  + R+H +LE  G +N+
Sbjct: 517 GDVCAVMRVHAFLEQWGLVNY 537



 Score = 31.6 bits (70), Expect = 3.2
 Identities = 15/40 (37%), Positives = 23/40 (57%)

Query: 112 TKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRT 151
           +K AS   +WT +E  L  + L  +   W K+S+ +GSRT
Sbjct: 614 SKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 653


>gi|229577180 MPN domain containing isoform 2 [Homo sapiens]
          Length = 451

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 7/160 (4%)

Query: 642 ETLAVRGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYF---SRGGAKFIGMIVSPYNRN 698
           ++L +RG S++GWYHSHP     PSL+DID Q  YQ      S G    + ++ SPY   
Sbjct: 285 QSLFLRGLSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQPCLALLCSPYYSG 344

Query: 699 NPLPYSQITCL-VISEEISPDGSYRLPYKFEVQQMLEEPQWGLVFEKTRWIIEKYRLSHS 757
           NP P S+I+   V+         Y +P   E+  + +      +  +   ++E Y+ S  
Sbjct: 345 NPGPESKISPFWVMPPPEQRPSDYGIPMDVEMAYVQDSFLTNDILHEMMLLVEFYKGSPD 404

Query: 758 SVPMDKIFRRDSDLTCLQKL-LECMRKTLSKVTNCFMAEE 796
            V + + + ++   T L KL +    +T    + C + E+
Sbjct: 405 LVRLQEPWSQEH--TYLDKLKISLASRTPKDQSLCHVLEQ 442


>gi|5031981 proteasome 26S subunit, non-ATPase 14 [Homo sapiens]
          Length = 310

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 5/122 (4%)

Query: 576 QVKVASEALLIMDLHAHVSMA-EVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCE-MD 633
           QV ++S ALL M  H    +  EV+GL+ G + + D  V V          TG+  E +D
Sbjct: 30  QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD-DYTVRVIDVFAMPQSGTGVSVEAVD 88

Query: 634 PVSQTQASETLAVRGFS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMI 691
           PV Q +  + L   G    V+GWYHSHP F    S  DI+TQ  +++   R  A  +  I
Sbjct: 89  PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 148

Query: 692 VS 693
            S
Sbjct: 149 QS 150


>gi|29789072 zinc finger, ZZ-type containing 3 [Homo sapiens]
          Length = 903

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 8/74 (10%)

Query: 112 TKPASYSVKWTIEEKELFEQGLAKF------GRRWTKISKLIGSRTVLQVKSYARQYFKN 165
           TKP +++  WT+EE++  EQ L K+       RRW KI+  +G+RT  QV S  ++YF  
Sbjct: 646 TKPETFNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIK 705

Query: 166 KVKCGL--DKETPN 177
             K G+     TPN
Sbjct: 706 LTKAGIPVPGRTPN 719


>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
          Length = 2440

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 20/199 (10%)

Query: 112 TKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGL 171
           T+P   S +WT EE E+ ++GL + GR W  I+K++G+++  Q K++   YF  K +  L
Sbjct: 620 TEPVETS-RWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNF---YFNYKRRHNL 675

Query: 172 DK--ETPNQKTGHNLQVKNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEEVD-ITDE 228
           D   +   QKT    + +  D        S +  + D ++ A   E+  +D EV+ +   
Sbjct: 676 DNLLQQHKQKTSRKPR-EERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEVEAVKPS 734

Query: 229 VDELSSQTPQKNSSSDLLLDFPNSKMHETNQGEFITSDSQEALFSKSSRGCLQNEKQDET 288
            D   + T + N+        P  ++  T +    TS S     +K +      ++  ET
Sbjct: 735 EDSPENATSRGNTE-------PAVELEPTTETAPSTSPSLAVPSTKPA-----EDESVET 782

Query: 289 LSSSEITLWTEKQSNGDKK 307
             +  I+  T +Q + D++
Sbjct: 783 QVNDSISAETAEQMDVDQQ 801



 Score = 35.4 bits (80), Expect = 0.22
 Identities = 57/298 (19%), Positives = 113/298 (37%), Gaps = 46/298 (15%)

Query: 121 WTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDKETPNQKT 180
           WT  EKE+F+    +  + +  I+  +  ++V     Y     KN+    L +    ++ 
Sbjct: 440 WTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRNYGKRR 499

Query: 181 GHNLQV-----------KNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEEVDITDEV 229
           G N Q+           K EDK  K       +   +      K EK    E     D++
Sbjct: 500 GRNQQIARPSQEEKVEEKEEDKAEKT-----EKKEEEKKDEEEKDEKEDSKENTKEKDKI 554

Query: 230 DELSSQTPQKNSSSDLLLDFPNSKMHETNQGEFITSDSQEALFSKSSRGCLQNE------ 283
           D  + +T ++  ++       NS+     +G    S + EA  + ++      E      
Sbjct: 555 DGTAEETEEREQATPRGRKTANSQ--GRRKGRITRSMTNEAAAASAAAAAATEEPPPPLP 612

Query: 284 KQDETLSSS--EITLWTEKQSNGDKKSIELNDQKFNELIK--------NC--------NK 325
              E +S+   E + WTE++    KK +  + + +  + K         C         +
Sbjct: 613 PPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRR 672

Query: 326 HDGRGIIVDARQLPSPEPCEIQKNLNDNEMLFHSCQMVEESHEE---EELKPPEQEIE 380
           H+   ++   +Q  S +P E +++++  E +  +    E+   E   EE  P + E+E
Sbjct: 673 HNLDNLLQQHKQKTSRKPRE-ERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEVE 729


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
           sapiens]
          Length = 2462

 Score = 50.8 bits (120), Expect = 5e-06
 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 16/138 (11%)

Query: 118 SVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDKETPN 177
           S +WT EE E  ++GL + GR W+ I++++GS+TV Q K++   YF  K +  LD+    
Sbjct: 612 SSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNF---YFNYKKRQNLDEILQQ 668

Query: 178 QKTGHNLQVKNEDKGTKAWTPSCLRGRA-------DPNLNAVKI----EKLSDDEEVDIT 226
            K    ++ +   +  K   P+     A       D  + A  +    E++ ++ E  + 
Sbjct: 669 HKL--KMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATVN 726

Query: 227 DEVDELSSQTPQKNSSSD 244
           +  D  S  +P   ++ D
Sbjct: 727 NSSDTESIPSPHTEAAKD 744



 Score = 30.0 bits (66), Expect = 9.2
 Identities = 58/278 (20%), Positives = 116/278 (41%), Gaps = 31/278 (11%)

Query: 121 WTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDKETPNQKT 180
           W+ +EKE F +   +  + +  I+  +  +TV +   Y     KN+    L + +  ++ 
Sbjct: 432 WSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLVRRSYRRRG 491

Query: 181 GHNLQVKNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEEVDITDEVDELSSQTPQKN 240
               Q + + +  +       + +  P   + + EK  D++E +   E +E   +   +N
Sbjct: 492 KSQQQQQQQQQQQQ-------QQQQQPMPRSSQEEK--DEKEKEKEAEKEEEKPEV--EN 540

Query: 241 SSSDLLLDFPNSKMHETN-QGEFITSDSQEALFSKSSR-GCLQNEKQDETLSSSEITLWT 298
              DLL +  +    E N + E + S  ++   S+  R G +     +E  S   IT   
Sbjct: 541 DKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEANSEEAIT--- 597

Query: 299 EKQSNGDKKSIELND-----QKFNELIKNCNKHDGRGIIVDARQLPSPEPCEIQKNLNDN 353
             Q + +  S+ELN+     ++  E  K      GR     AR + S    +  KN   N
Sbjct: 598 -PQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQC-KNFYFN 655

Query: 354 EMLFHSCQMVEESHEEEELKPPEQEIEIDRNIIQEEEK 391
              +   Q ++E  ++ +LK     +E +RN  ++++K
Sbjct: 656 ---YKKRQNLDEILQQHKLK-----MEKERNARRKKKK 685


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
           sapiens]
          Length = 2524

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 3/56 (5%)

Query: 118 SVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDK 173
           S +WT EE E  ++GL + GR W+ I++++GS+TV Q K++   YF  K +  LD+
Sbjct: 612 SSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNF---YFNYKKRQNLDE 664



 Score = 30.0 bits (66), Expect = 9.2
 Identities = 58/278 (20%), Positives = 116/278 (41%), Gaps = 31/278 (11%)

Query: 121 WTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDKETPNQKT 180
           W+ +EKE F +   +  + +  I+  +  +TV +   Y     KN+    L + +  ++ 
Sbjct: 432 WSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLVRRSYRRRG 491

Query: 181 GHNLQVKNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEEVDITDEVDELSSQTPQKN 240
               Q + + +  +       + +  P   + + EK  D++E +   E +E   +   +N
Sbjct: 492 KSQQQQQQQQQQQQ-------QQQQQPMPRSSQEEK--DEKEKEKEAEKEEEKPEV--EN 540

Query: 241 SSSDLLLDFPNSKMHETN-QGEFITSDSQEALFSKSSR-GCLQNEKQDETLSSSEITLWT 298
              DLL +  +    E N + E + S  ++   S+  R G +     +E  S   IT   
Sbjct: 541 DKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEANSEEAIT--- 597

Query: 299 EKQSNGDKKSIELND-----QKFNELIKNCNKHDGRGIIVDARQLPSPEPCEIQKNLNDN 353
             Q + +  S+ELN+     ++  E  K      GR     AR + S    +  KN   N
Sbjct: 598 -PQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQC-KNFYFN 655

Query: 354 EMLFHSCQMVEESHEEEELKPPEQEIEIDRNIIQEEEK 391
              +   Q ++E  ++ +LK     +E +RN  ++++K
Sbjct: 656 ---YKKRQNLDEILQQHKLK-----MEKERNARRKKKK 685


>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
          Length = 553

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 11/133 (8%)

Query: 111 PTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCG 170
           P      + +WT EE+ L  QG+ K+G+ +  I+ +IG++TV QVK++   Y   + +  
Sbjct: 338 PESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNY---RRRFN 394

Query: 171 LDKETPNQKTGHNLQVKNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEEVDITDEVD 230
           L++     +     Q  N D  T         G    + + V   K +D+EE   T +  
Sbjct: 395 LEEVLQEWEAEQGTQASNGDAST--------LGEETKSASNVPSGKSTDEEEEAQTPQAP 446

Query: 231 ELSSQTPQKNSSS 243
                +P   SS+
Sbjct: 447 RTLGPSPPAPSST 459



 Score = 38.9 bits (89), Expect = 0.020
 Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 120 KWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGL-DKETPNQ 178
           +WT+E+K LFEQ  +  G+ + +I +++  +T+  +  Y   + K + +  L D++    
Sbjct: 146 EWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKL 205

Query: 179 KTGHNLQVKNED 190
              HN    ++D
Sbjct: 206 ANRHNQGDSDDD 217


>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
          Length = 495

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 11/133 (8%)

Query: 111 PTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCG 170
           P      + +WT EE+ L  QG+ K+G+ +  I+ +IG++TV QVK++   Y   + +  
Sbjct: 280 PESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNY---RRRFN 336

Query: 171 LDKETPNQKTGHNLQVKNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEEVDITDEVD 230
           L++     +     Q  N D  T         G    + + V   K +D+EE   T +  
Sbjct: 337 LEEVLQEWEAEQGTQASNGDAST--------LGEETKSASNVPSGKSTDEEEEAQTPQAP 388

Query: 231 ELSSQTPQKNSSS 243
                +P   SS+
Sbjct: 389 RTLGPSPPAPSST 401



 Score = 38.9 bits (89), Expect = 0.020
 Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 120 KWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGL-DKETPNQ 178
           +WT+E+K LFEQ  +  G+ + +I +++  +T+  +  Y   + K + +  L D++    
Sbjct: 88  EWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKL 147

Query: 179 KTGHNLQVKNED 190
              HN    ++D
Sbjct: 148 ANRHNQGDSDDD 159


>gi|112807226 hypothetical protein LOC91748 [Homo sapiens]
          Length = 1045

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 42/240 (17%)

Query: 100  LQKTAKIMVHSPTKPASY---------SVKWTIEEKELFEQGLAKFGRRWTKISKLIGSR 150
            L+   K+++  P +P ++         S +W + E++LF +G+A + + +  + KLI ++
Sbjct: 803  LETLNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQKLIQTK 862

Query: 151  TVLQVKSYARQYFKNKVKCGL-------DKETPNQKTGH---NLQVKNEDKGTKAWTP-- 198
            TV Q   +   Y K +VK G        D +T ++K+      + +K   K  +   P  
Sbjct: 863  TVAQCVEFYYTY-KKQVKIGRNGTLTFGDVDTSDEKSAQEEVEVDIKTSQKFPRVPLPRR 921

Query: 199  -SCLRGRADPNLNAVKIEKLSDDEEVDITDEVDE--------------LSSQTPQKNSSS 243
             S    R +P    VK  +   +EEV    E +E               ++QT Q N S+
Sbjct: 922  ESPSEERLEPK-REVKEPRKEGEEEVPEIQEKEEQEEGRERSRRAAAVKATQTLQANESA 980

Query: 244  DLLLDFPNSKMHETNQGEFITSDSQEALFSKSSRGCLQNEKQDETLSSSEITLWTEKQSN 303
              +L   + + +         S+       KS R    +EK+ +T + S+    T+ Q N
Sbjct: 981  SDILILRSHESNAPGSAGGQASEKPREGTGKSRRALPFSEKKKKTETFSK----TQNQEN 1036


>gi|44890062 hypothetical protein LOC91748 [Homo sapiens]
          Length = 1045

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 42/240 (17%)

Query: 100  LQKTAKIMVHSPTKPASY---------SVKWTIEEKELFEQGLAKFGRRWTKISKLIGSR 150
            L+   K+++  P +P ++         S +W + E++LF +G+A + + +  + KLI ++
Sbjct: 803  LETLNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQKLIQTK 862

Query: 151  TVLQVKSYARQYFKNKVKCGL-------DKETPNQKTGH---NLQVKNEDKGTKAWTP-- 198
            TV Q   +   Y K +VK G        D +T ++K+      + +K   K  +   P  
Sbjct: 863  TVAQCVEFYYTY-KKQVKIGRNGTLTFGDVDTSDEKSAQEEVEVDIKTSQKFPRVPLPRR 921

Query: 199  -SCLRGRADPNLNAVKIEKLSDDEEVDITDEVDE--------------LSSQTPQKNSSS 243
             S    R +P    VK  +   +EEV    E +E               ++QT Q N S+
Sbjct: 922  ESPSEERLEPK-REVKEPRKEGEEEVPEIQEKEEQEEGRERSRRAAAVKATQTLQANESA 980

Query: 244  DLLLDFPNSKMHETNQGEFITSDSQEALFSKSSRGCLQNEKQDETLSSSEITLWTEKQSN 303
              +L   + + +         S+       KS R    +EK+ +T + S+    T+ Q N
Sbjct: 981  SDILILRSHESNAPGSAGGQASEKPREGTGKSRRALPFSEKKKKTETFSK----TQNQEN 1036


>gi|7661892 REST corepressor 1 [Homo sapiens]
          Length = 482

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 43/209 (20%), Positives = 93/209 (44%), Gaps = 23/209 (11%)

Query: 120 KWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCG-LDKETPNQ 178
           +WT+E+K LFEQ  +  G+ + +I +++  +++  +  +   + K + K   +D+    Q
Sbjct: 191 EWTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRHARKQ 250

Query: 179 KTGHNLQVKNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEEVDITDEVDELSSQTPQ 238
           K       ++ED+  +A   + +    D N  + K        EV  T+ V ++     +
Sbjct: 251 KRERE---ESEDELEEANGNNPIDIEVDQNKESKK--------EVPPTETVPQVKK---E 296

Query: 239 KNSSSDLLLDFPNSKMHETNQGEFITSDSQEALFSKSSRGCLQNEKQDETLSSSEITLWT 298
           K+S+        N    +  +G F++ +  EA+ + ++       + D  L S +  +  
Sbjct: 297 KHST-----QAKNRAKRKPPKGMFLSQEDVEAVSANATAATTVLRQLDMELVSVKRQIQN 351

Query: 299 EKQSNG---DKKSIELNDQKFNELIKNCN 324
            KQ+N    +K    +   +  E+I+ CN
Sbjct: 352 IKQTNSALKEKLDGGIEPYRLPEVIQKCN 380



 Score = 41.6 bits (96), Expect = 0.003
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 12/106 (11%)

Query: 118 SVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDKETPN 177
           + +WT EE+ L  Q + K+GR +  IS +IG+++V+QVK++   Y   + +  +D+    
Sbjct: 380 NARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNY---RRRFNIDEVLQE 436

Query: 178 QKTGHNLQVKNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEEV 223
            +  H    K E  G     PS  +    P+ N++K+ +  D+  V
Sbjct: 437 WEAEHG---KEETNG-----PSNQKPVKSPD-NSIKMPEEEDEAPV 473


>gi|209977084 REST corepressor 3 isoform c [Homo sapiens]
          Length = 449

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 11/112 (9%)

Query: 111 PTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCG 170
           P      + +WT EE+ L  QG+ K+G+ +  I+ +IG++TV QVK++   Y   + +  
Sbjct: 338 PESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNY---RRRFN 394

Query: 171 LDKETPNQKTGHNLQVKNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEE 222
           L++     +     Q  N D  T         G    + + V   K +D+EE
Sbjct: 395 LEEVLQEWEAEQGTQASNGDAST--------LGEETKSASNVPSGKSTDEEE 438



 Score = 38.9 bits (89), Expect = 0.020
 Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 120 KWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGL-DKETPNQ 178
           +WT+E+K LFEQ  +  G+ + +I +++  +T+  +  Y   + K + +  L D++    
Sbjct: 146 EWTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKL 205

Query: 179 KTGHNLQVKNED 190
              HN    ++D
Sbjct: 206 ANRHNQGDSDDD 217


>gi|71061468 centromere protein E [Homo sapiens]
          Length = 2701

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 81/416 (19%), Positives = 168/416 (40%), Gaps = 56/416 (13%)

Query: 53   LDNTISEENRAVIEKMLLEEEYYLSKKSQP----EKVWLDQKEDDKKYMKSLQKTAKIMV 108
            L  ++SE+   +I    LE+ +   ++  P    E+  L   ++  +  +++ +   +  
Sbjct: 1254 LRRSVSEKTAQIINTQDLEKSHTKLQEEIPVLHEEQELLPNVKEVSETQETMNELELLTE 1313

Query: 109  HSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSR----TVLQVKSYARQYFK 164
             S TK ++   +  +E   L E    KF     +I  L   R    T+ +         K
Sbjct: 1314 QSTTKDSTTLARIEMERLRLNE----KFQESQEEIKSLTKERDNLKTIKEALEVKHDQLK 1369

Query: 165  NKVKCGLDKETPNQ-KTGHNLQVKNEDKGTKAWTPSCLRGRA-DPNLNAVKIEKL----- 217
              ++  L K   +Q K   +L +K +D  T        + +  D  L  ++IE L     
Sbjct: 1370 EHIRETLAKIQESQSKQEQSLNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKR 1429

Query: 218  ---SDDEEVDITDEVDELSSQTPQKNSSSDLLLDFPNSKMHETNQGEFITSDSQEALFSK 274
               S DE   +  E D+L        S SD L +         N  E +    +     K
Sbjct: 1430 LQESHDEMKSVAKEKDDLQRLQEVLQSESDQLKE---------NIKEIVAKHLETEEELK 1480

Query: 275  SSRGCLQNEKQDETLSSSEITLWTEKQ---SNGDKKSIELNDQKFNELIKNCNKHDGRGI 331
             +  CL+  +Q+ET++   + L +EK+   S   K+   +ND+  N++ +   K +   I
Sbjct: 1481 VAHCCLK--EQEETINELRVNL-SEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNI 1537

Query: 332  ---------IVDARQLPSPEPCEIQKNLNDNEMLFHSCQMVEESHEE--------EELKP 374
                     + + +Q       +     +    +      ++ES EE        EE+K 
Sbjct: 1538 KQISEVQEKVNELKQFKEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKEEMKR 1597

Query: 375  PEQEIEIDRNIIQEEEKQAIPEFFEGRQAKTPERYLKIRNYILDQWEICKPKYLNK 430
             ++ ++I+R+ ++E  K+ + +  E ++ +   ++LK+      Q ++C+ ++L +
Sbjct: 1598 VQEALQIERDQLKENTKEIVAKMKESQEKE--YQFLKMTAVNETQEKMCEIEHLKE 1651


>gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform 8
           [Homo sapiens]
          Length = 605

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)

Query: 50  PWTLDNTISEENRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKS-LQKTAKIMV 108
           PWT      EE++ VIE         L +K  P++ W        K++K  + K  +   
Sbjct: 94  PWT-----KEEDQRVIE---------LVQKYGPKR-W----SVIAKHLKGRIGKQCRERW 134

Query: 109 HSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVK 168
           H+   P      WT EE  +  Q   + G RW +I+KL+  RT   +K++     + KV+
Sbjct: 135 HNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194


>gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform 7
           [Homo sapiens]
          Length = 603

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)

Query: 50  PWTLDNTISEENRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKS-LQKTAKIMV 108
           PWT      EE++ VIE         L +K  P++ W        K++K  + K  +   
Sbjct: 94  PWT-----KEEDQRVIE---------LVQKYGPKR-W----SVIAKHLKGRIGKQCRERW 134

Query: 109 HSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVK 168
           H+   P      WT EE  +  Q   + G RW +I+KL+  RT   +K++     + KV+
Sbjct: 135 HNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194


>gi|239735492 v-myb myeloblastosis viral oncogene homolog isoform 6
           [Homo sapiens]
          Length = 745

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)

Query: 50  PWTLDNTISEENRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKS-LQKTAKIMV 108
           PWT      EE++ VIE         L +K  P++ W        K++K  + K  +   
Sbjct: 94  PWT-----KEEDQRVIE---------LVQKYGPKR-W----SVIAKHLKGRIGKQCRERW 134

Query: 109 HSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVK 168
           H+   P      WT EE  +  Q   + G RW +I+KL+  RT   +K++     + KV+
Sbjct: 135 HNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194


>gi|239735490 v-myb myeloblastosis viral oncogene homolog isoform 5
           [Homo sapiens]
          Length = 555

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)

Query: 50  PWTLDNTISEENRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKS-LQKTAKIMV 108
           PWT      EE++ VIE         L +K  P++ W        K++K  + K  +   
Sbjct: 94  PWT-----KEEDQRVIE---------LVQKYGPKR-W----SVIAKHLKGRIGKQCRERW 134

Query: 109 HSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVK 168
           H+   P      WT EE  +  Q   + G RW +I+KL+  RT   +K++     + KV+
Sbjct: 135 HNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194


>gi|239735488 v-myb myeloblastosis viral oncogene homolog isoform 4
           [Homo sapiens]
          Length = 758

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)

Query: 50  PWTLDNTISEENRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKS-LQKTAKIMV 108
           PWT      EE++ VIE         L +K  P++ W        K++K  + K  +   
Sbjct: 94  PWT-----KEEDQRVIE---------LVQKYGPKR-W----SVIAKHLKGRIGKQCRERW 134

Query: 109 HSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVK 168
           H+   P      WT EE  +  Q   + G RW +I+KL+  RT   +K++     + KV+
Sbjct: 135 HNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194


>gi|46361980 v-myb myeloblastosis viral oncogene homolog isoform 2
           [Homo sapiens]
          Length = 640

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)

Query: 50  PWTLDNTISEENRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKS-LQKTAKIMV 108
           PWT      EE++ VIE         L +K  P++ W        K++K  + K  +   
Sbjct: 94  PWT-----KEEDQRVIE---------LVQKYGPKR-W----SVIAKHLKGRIGKQCRERW 134

Query: 109 HSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVK 168
           H+   P      WT EE  +  Q   + G RW +I+KL+  RT   +K++     + KV+
Sbjct: 135 HNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194


>gi|194328729 v-myb myeloblastosis viral oncogene homolog isoform 1
           [Homo sapiens]
          Length = 761

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)

Query: 50  PWTLDNTISEENRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKS-LQKTAKIMV 108
           PWT      EE++ VIE         L +K  P++ W        K++K  + K  +   
Sbjct: 94  PWT-----KEEDQRVIE---------LVQKYGPKR-W----SVIAKHLKGRIGKQCRERW 134

Query: 109 HSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVK 168
           H+   P      WT EE  +  Q   + G RW +I+KL+  RT   +K++     + KV+
Sbjct: 135 HNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194


>gi|194328727 v-myb myeloblastosis viral oncogene homolog isoform 3
           [Homo sapiens]
          Length = 637

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)

Query: 50  PWTLDNTISEENRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKS-LQKTAKIMV 108
           PWT      EE++ VIE         L +K  P++ W        K++K  + K  +   
Sbjct: 94  PWT-----KEEDQRVIE---------LVQKYGPKR-W----SVIAKHLKGRIGKQCRERW 134

Query: 109 HSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVK 168
           H+   P      WT EE  +  Q   + G RW +I+KL+  RT   +K++     + KV+
Sbjct: 135 HNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194


>gi|64762484 BRCA1/BRCA2-containing complex, subunit 3 isoform 2
           [Homo sapiens]
          Length = 291

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 4/50 (8%)

Query: 644 LAVRGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVS 693
           L  R   V+GWYHSHP     PS  D+ TQA YQ    +G   F+G+I S
Sbjct: 110 LTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQ-MMDQG---FVGLIFS 155


>gi|13236583 BRCA1/BRCA2-containing complex, subunit 3 isoform 1
           [Homo sapiens]
          Length = 316

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 4/50 (8%)

Query: 644 LAVRGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVS 693
           L  R   V+GWYHSHP     PS  D+ TQA YQ    +G   F+G+I S
Sbjct: 110 LTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQ-MMDQG---FVGLIFS 155


>gi|221139773 v-myb myeloblastosis viral oncogene homolog
           (avian)-like 1 isoform 2 [Homo sapiens]
          Length = 692

 Score = 40.0 bits (92), Expect = 0.009
 Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 26/140 (18%)

Query: 50  PWTLDNTISEENRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKS-LQKTAKIMV 108
           PWT      EE++ VIE         L +K  P++  L  K     ++K  + K  +   
Sbjct: 89  PWT-----KEEDQRVIE---------LVQKYGPKRWSLIAK-----HLKGRIGKQCRERW 129

Query: 109 HSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKV- 167
           H+   P      WT EE  +  +   + G RW +I+KL+  RT   +K++     + KV 
Sbjct: 130 HNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVE 189

Query: 168 -----KCGLDKETPNQKTGH 182
                + G+  E  + K  H
Sbjct: 190 QEGYLQDGIKSERSSSKLQH 209


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.131    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,665,625
Number of Sequences: 37866
Number of extensions: 1544416
Number of successful extensions: 4971
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 4575
Number of HSP's gapped (non-prelim): 428
length of query: 828
length of database: 18,247,518
effective HSP length: 111
effective length of query: 717
effective length of database: 14,044,392
effective search space: 10069829064
effective search space used: 10069829064
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.