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Search of human proteins with 147903292
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|147903292 nuclear localized factor 1 [Homo sapiens]
(369 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|147903292 nuclear localized factor 1 [Homo sapiens] 748 0.0
gi|157278361 nuclear localized factor 2 [Homo sapiens] 548 e-156
gi|210147453 nuclear localized factor 3 [Homo sapiens] 157 2e-38
gi|209862787 hypothetical protein LOC100191040 [Homo sapiens] 145 6e-35
gi|84993742 tripartite motif-containing 71 [Homo sapiens] 44 3e-04
gi|239756083 PREDICTED: hypothetical protein [Homo sapiens] 43 4e-04
gi|239750612 PREDICTED: hypothetical protein [Homo sapiens] 43 4e-04
gi|239744919 PREDICTED: hypothetical protein XP_002343307 [Homo ... 43 4e-04
gi|188219577 ring finger protein 19B isoform a [Homo sapiens] 43 4e-04
gi|188219579 ring finger protein 19B isoform b [Homo sapiens] 43 4e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 43 5e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 43 5e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 43 5e-04
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 42 7e-04
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 42 7e-04
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens] 42 9e-04
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|169211642 PREDICTED: hypothetical protein [Homo sapiens] 40 0.003
gi|239746769 PREDICTED: similar to Serine/threonine-protein kina... 40 0.003
gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo s... 40 0.003
gi|38327539 inositol polyphosphate-5-phosphatase E [Homo sapiens] 40 0.003
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 40 0.004
gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo ... 39 0.007
gi|239755232 PREDICTED: hypothetical protein [Homo sapiens] 39 0.010
gi|239749768 PREDICTED: hypothetical protein [Homo sapiens] 39 0.010
gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo ... 39 0.010
gi|110832843 TBP-associated factor 4 [Homo sapiens] 39 0.010
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 39 0.010
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... 39 0.010
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens] 38 0.013
>gi|147903292 nuclear localized factor 1 [Homo sapiens]
Length = 369
Score = 748 bits (1930), Expect = 0.0
Identities = 369/369 (100%), Positives = 369/369 (100%)
Query: 1 MWCLERLRLGPECLRRSGDWLLPGRARGAKSRTTAACANVLTPDRIPEFCIPPRLMPRLA 60
MWCLERLRLGPECLRRSGDWLLPGRARGAKSRTTAACANVLTPDRIPEFCIPPRLMPRLA
Sbjct: 1 MWCLERLRLGPECLRRSGDWLLPGRARGAKSRTTAACANVLTPDRIPEFCIPPRLMPRLA 60
Query: 61 LAALRNSWVEEAGMDEGAGRTDWDPRSQAALSLPHLPRVRTAYGFCALLESPHTRRKESL 120
LAALRNSWVEEAGMDEGAGRTDWDPRSQAALSLPHLPRVRTAYGFCALLESPHTRRKESL
Sbjct: 61 LAALRNSWVEEAGMDEGAGRTDWDPRSQAALSLPHLPRVRTAYGFCALLESPHTRRKESL 120
Query: 121 LLGGPPAPRPRAHTYGGGGGPDALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCR 180
LLGGPPAPRPRAHTYGGGGGPDALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCR
Sbjct: 121 LLGGPPAPRPRAHTYGGGGGPDALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCR 180
Query: 181 LLRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVPFPE 240
LLRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVPFPE
Sbjct: 181 LLRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVPFPE 240
Query: 241 RLEAEGTVALGRAGDALRLAAEYCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSLVLRP 300
RLEAEGTVALGRAGDALRLAAEYCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSLVLRP
Sbjct: 241 RLEAEGTVALGRAGDALRLAAEYCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSLVLRP 300
Query: 301 PGTALRQCSTVVGRSRKASFDQDFCFDGLSEDEVRRLAVRVKARDEGRGRERGRLLGQGE 360
PGTALRQCSTVVGRSRKASFDQDFCFDGLSEDEVRRLAVRVKARDEGRGRERGRLLGQGE
Sbjct: 301 PGTALRQCSTVVGRSRKASFDQDFCFDGLSEDEVRRLAVRVKARDEGRGRERGRLLGQGE 360
Query: 361 LSLGALLLL 369
LSLGALLLL
Sbjct: 361 LSLGALLLL 369
>gi|157278361 nuclear localized factor 2 [Homo sapiens]
Length = 364
Score = 548 bits (1411), Expect = e-156
Identities = 288/347 (82%), Positives = 296/347 (85%), Gaps = 15/347 (4%)
Query: 36 ACANVLTPDRIPEFCIPPRLMPRLAL-------------AALRNSWVEEAGMDEGAGRTD 82
A A VLTP+RIPEFCIPPRL L AA + W A DE AGRTD
Sbjct: 20 AFAKVLTPNRIPEFCIPPRLPAPCTLESPIRAAAVPRRCAAESDLWPRAA--DEDAGRTD 77
Query: 83 WDPRSQAALSLPHLPRVRTAYGFCALLESPHTRRKESLLLGGPPAPRPRAHTYGGGGGPD 142
WDPRSQAALSLPHLPRVRT YGFCALLESPHTRRKESLLLGGPPAPRPRAH+ GGGGGPD
Sbjct: 78 WDPRSQAALSLPHLPRVRTTYGFCALLESPHTRRKESLLLGGPPAPRPRAHSCGGGGGPD 137
Query: 143 ALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCRLLRVPDGLLSRALRAGRSRRLT 202
A LGTL PR PGPATPAAPG PR PQDALA PR CRLLRVPDGLLSRALRAGRSRRL
Sbjct: 138 APLGTLCGPRGPGPATPAAPGGPRLPQDALAAGPRRCRLLRVPDGLLSRALRAGRSRRLA 197
Query: 203 RVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVPFPERLEAEGTVALGRAGDALRLAAE 262
RVRSVSSGNED+ERRAGS+SPARAPS+SP SSR P PERLEA+GTVALGRAGDALRLAAE
Sbjct: 198 RVRSVSSGNEDEERRAGSESPARAPSSSPLSSRAPLPERLEAKGTVALGRAGDALRLAAE 257
Query: 263 YCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSLVLRPPGTALRQCSTVVGRSRKASFDQ 322
YCPGT RLRLRLLRAES GGAPGPRAV CRLSLVLRPPGTA QCS VVGRSRKASFDQ
Sbjct: 258 YCPGTRRLRLRLLRAESLFGGAPGPRAVRCRLSLVLRPPGTARWQCSAVVGRSRKASFDQ 317
Query: 323 DFCFDGLSEDEVRRLAVRVKARDEGRGRERGRLLGQGELSLGALLLL 369
DFCFDGLSEDEVRRLAVRVKARDEGRGR+RGRLLGQGELSLGALLLL
Sbjct: 318 DFCFDGLSEDEVRRLAVRVKARDEGRGRDRGRLLGQGELSLGALLLL 364
>gi|210147453 nuclear localized factor 3 [Homo sapiens]
Length = 421
Score = 157 bits (396), Expect = 2e-38
Identities = 146/428 (34%), Positives = 193/428 (45%), Gaps = 76/428 (17%)
Query: 1 MWCLERLRLGPECLRRSGDWLLPGRARGAKSRTTAACANVLTPDRIPEFCIPPRLMP--- 57
MW LERLR E G G G K+ +NVLTPD+IP+F IPP+L
Sbjct: 6 MWFLERLRGSGENGAARG----VGSEAGDKASKGPLYSNVLTPDKIPDFFIPPKLPSGPA 61
Query: 58 ---------------RLALAALRNS----------WVEEAGMDEGAGR------------ 80
LA AA R + E + + A R
Sbjct: 62 EGEGQAALGPSTSEQNLASAAPRQTPRSPRLPAKLAAESKSLLKAATRHVIQIESAEDWL 121
Query: 81 ----TDWDPRSQAALSLPHLPRVRTAYGFCALLESPHTRRKESLL---------LGGPPA 127
TD DP++Q A+SLP +P+ +T+YGF L ESPHTRRKESL +G P A
Sbjct: 122 SEEATDADPQAQGAMSLPSVPKAQTSYGFAMLAESPHTRRKESLFHSEHGALAQVGSPGA 181
Query: 128 PRPRA--HTYGGGGGPDALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCRLLRVP 185
R RA GG GGP G L P + G + P G LL
Sbjct: 182 GRRRAAAKANGGDGGPREAGGALMSPGRYFSGGESDTG------SSAESSPFGSPLLSRS 235
Query: 186 DGLLSRALRAGRSR----RLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVPFPER 241
LL + +++ R + R S +D A S R +PP P PE
Sbjct: 236 VSLLKGFAQDSQAKVSQLRHSVGRHGSLSADDSTPDASPGSRRRLTRRAPPE---PGPES 292
Query: 242 LEAEG--TVALGRAGDALRLAAEYCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSLVLR 299
+A G TV +G G ++RL AEY G RLR+ LL AE R+++C + L L
Sbjct: 293 GQARGEHTVHVGPRG-SVRLLAEYEAGQARLRVHLLAAEGLYDRLCDARSINCCVGLCL- 350
Query: 300 PPGTALRQCSTVVGRSRKASFDQDFCFDGLSEDEVRRLAVRVKARDEGRGRERGRLLGQG 359
PG +Q ST+V SR+ F++DF FDGL VR+LA+R+K ++G +R LLG+
Sbjct: 351 VPGKLQKQRSTIVKNSRRPVFNEDFFFDGLGPASVRKLALRIKVVNKGSSLKRDTLLGEK 410
Query: 360 ELSLGALL 367
EL L +LL
Sbjct: 411 ELPLTSLL 418
>gi|209862787 hypothetical protein LOC100191040 [Homo sapiens]
Length = 353
Score = 145 bits (366), Expect = 6e-35
Identities = 140/383 (36%), Positives = 168/383 (43%), Gaps = 66/383 (17%)
Query: 1 MWCLERLRLGPECLRRSGDWLLPG--RARGAKSRTTAACANVLTPDRIPEFCIPPRLM-P 57
MW LE+ + W G R A T+AC NVLTPDRIP+F IPPRL P
Sbjct: 1 MWLLEKAGYKVGAAEPAARWAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFIPPRLPDP 60
Query: 58 RLALAALRNSWVEEAGMDEGAGRTDWDPRSQAALSLPHLPRVRTAYGFCALLESPHTRRK 117
A+ A R AGR A SLPHL G+ L ESPHTRR+
Sbjct: 61 GGAVPAARR---------HVAGRG-----LPATCSLPHLAGRE---GWAFLPESPHTRRR 103
Query: 118 ESLLLGGPPAPR---PRAHTYGGGGGPDALLGTLRVPRAPGPATPAAP-----GCPRPPQ 169
ESL G PPAP P A + PD LR+ RAP T ++P G PRP
Sbjct: 104 ESLFHGPPPAPAGGLPAAQSRLHVSAPD-----LRLCRAPDSDTASSPDSSPFGSPRP-- 156
Query: 170 DALARRPRGCRLLRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAGSQSPARAPST 229
GL GR RR++R S+S + SP RA
Sbjct: 157 -----------------GL-------GR-RRVSRPHSLSP-EKASSADTSPHSPRRAGPP 190
Query: 230 SPPSSRVPF---PERLEAEGTVALGRAGDALRLAAEYCPGTGRLRLRLLRAES--PAGGA 284
+PP + F R E + LG G LRL+ EY G GRLRLRL+ AE
Sbjct: 191 TPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSR 250
Query: 285 PGPRAVSCRLSLVLRPPGTALRQCSTVVGRSRKASFDQDFCFDGLSEDEVRRLAVRVKAR 344
PG C + L LRP Q S VV S F++DF FDGL ++ ++R K
Sbjct: 251 PGSGGGGCCVVLRLRPRVRPREQQSRVVKCSANPIFNEDFFFDGLGPPDLAARSLRAKVL 310
Query: 345 DEGRGRERGRLLGQGELSLGALL 367
D G G R LLG+ E L ALL
Sbjct: 311 DRGAGLRRDVLLGECETPLIALL 333
>gi|84993742 tripartite motif-containing 71 [Homo sapiens]
Length = 868
Score = 43.5 bits (101), Expect = 3e-04
Identities = 45/146 (30%), Positives = 55/146 (37%), Gaps = 28/146 (19%)
Query: 125 PPAPRPRAHTYGGGGG------------PDALLGTLRVPRAPGPATPA--APGCPRP-PQ 169
PP RA G GG P A +P+AP P P+ APG P P
Sbjct: 130 PPPKNGRAGAPAGAGGHSNHRHHAHHAHPRASASAPPLPQAPQPPAPSRSAPGGPAASPS 189
Query: 170 DALARRPRGC-----------RLLRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRA 218
L RRP GC R L + L +RA + RLT+ + G A
Sbjct: 190 ALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIERGPPGPGAAA 249
Query: 219 GSQSPARAPS-TSPPSSRVP-FPERL 242
+Q P PP S + FPERL
Sbjct: 250 AAQQLGLGPPFPGPPFSILSVFPERL 275
Score = 29.6 bits (65), Expect = 4.5
Identities = 52/222 (23%), Positives = 66/222 (29%), Gaps = 62/222 (27%)
Query: 136 GGGGGPDALLGTL-----------------RVPRAPGPAT--PAAPGCPRPPQDALARRP 176
GGGGGP A L R+P A G A P CP Q +
Sbjct: 44 GGGGGPGAAARRLHVLPCLHAFCRPCLEAHRLPAAGGGAAGEPLKLRCPVCDQKVVLAEA 103
Query: 177 RGCRLLRVPDGLLSRALRA------------GRSRRLTRVRSVSSGNEDKERRAGSQSPA 224
G L LLS L A GR+ +G R +
Sbjct: 104 AGMDALPSSAFLLSNLLDAVVATADEPPPKNGRAGA-----PAGAGGHSNHRHHAHHAHP 158
Query: 225 RAPSTSPPSSRVPFPERLEA-------------------------EGTVALGRAGDALRL 259
RA +++PP + P P EG A R D
Sbjct: 159 RASASAPPLPQAPQPPAPSRSAPGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEH 218
Query: 260 AAEYCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSLVLRPP 301
+ C + R+RL + G PGP A + L L PP
Sbjct: 219 LCDNCVRAHQ-RVRLTKDHYIERGPPGPGAAAAAQQLGLGPP 259
>gi|239756083 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 43.1 bits (100), Expect = 4e-04
Identities = 62/189 (32%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 150 VPRAPGPATPAAP--GCPRPPQ--------DALARRPRGCRLLRVPDGLLSRALRAGRSR 199
+P P P AP G RPP+ D A+ PR R LR+ L R +G ++
Sbjct: 2 IPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRL---LAHRCPPSGEAK 58
Query: 200 RLTRVRSVSSGNEDKERRAGSQSPAR-APSTSPPSSRVPFPERLEAE-----GTVALGRA 253
L R +G + R+ SQS R AP SP + +P RLE + G + G
Sbjct: 59 LLARP---GTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFP 115
Query: 254 GDALRLAAEYCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSL--VLRP----PGTA-LR 306
G AAE G GR GAPG R R + VLRP GTA L
Sbjct: 116 GSRTPRAAERTIGPGR------------RGAPGRRTGPLRENSLPVLRPGVGQTGTAPLA 163
Query: 307 QCSTVVGRS 315
+ S GRS
Sbjct: 164 RGSRGAGRS 172
>gi|239750612 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 43.1 bits (100), Expect = 4e-04
Identities = 62/189 (32%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 150 VPRAPGPATPAAP--GCPRPPQ--------DALARRPRGCRLLRVPDGLLSRALRAGRSR 199
+P P P AP G RPP+ D A+ PR R LR+ L R +G ++
Sbjct: 2 IPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRL---LAHRCPPSGEAK 58
Query: 200 RLTRVRSVSSGNEDKERRAGSQSPAR-APSTSPPSSRVPFPERLEAE-----GTVALGRA 253
L R +G + R+ SQS R AP SP + +P RLE + G + G
Sbjct: 59 LLARP---GTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFP 115
Query: 254 GDALRLAAEYCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSL--VLRP----PGTA-LR 306
G AAE G GR GAPG R R + VLRP GTA L
Sbjct: 116 GSRTPRAAERTIGPGR------------RGAPGRRTGPLRENSLPVLRPGVGQTGTAPLA 163
Query: 307 QCSTVVGRS 315
+ S GRS
Sbjct: 164 RGSRGAGRS 172
>gi|239744919 PREDICTED: hypothetical protein XP_002343307 [Homo
sapiens]
Length = 174
Score = 43.1 bits (100), Expect = 4e-04
Identities = 62/189 (32%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 150 VPRAPGPATPAAP--GCPRPPQ--------DALARRPRGCRLLRVPDGLLSRALRAGRSR 199
+P P P AP G RPP+ D A+ PR R LR+ L R +G ++
Sbjct: 2 IPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRL---LAHRCPPSGEAK 58
Query: 200 RLTRVRSVSSGNEDKERRAGSQSPAR-APSTSPPSSRVPFPERLEAE-----GTVALGRA 253
L R +G + R+ SQS R AP SP + +P RLE + G + G
Sbjct: 59 LLARP---GTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFP 115
Query: 254 GDALRLAAEYCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSL--VLRP----PGTA-LR 306
G AAE G GR GAPG R R + VLRP GTA L
Sbjct: 116 GSRTPRAAERTIGPGR------------RGAPGRRTGPLRENSLPVLRPGVGQTGTAPLA 163
Query: 307 QCSTVVGRS 315
+ S GRS
Sbjct: 164 RGSRGAGRS 172
>gi|188219577 ring finger protein 19B isoform a [Homo sapiens]
Length = 732
Score = 43.1 bits (100), Expect = 4e-04
Identities = 41/120 (34%), Positives = 48/120 (40%), Gaps = 17/120 (14%)
Query: 196 GRSRRLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVPF------PERLEAEGTVA 249
GR RRLT S+ + RA Q+ P+ PP + P PE L AE A
Sbjct: 28 GRRRRLTLHSVFSASARGRRARAKPQAEPPPPAAQPPPAPAPAAAQGPPPEALPAEP--A 85
Query: 250 LGRAGDALRLAAEYCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSLVLRPPGTALRQCS 309
+A AAE PG E+ GG PG V C L LV PP A R S
Sbjct: 86 AEAEAEAAAAAAE--PGFDD-------EEAAEGGGPGAEEVECPLCLVRLPPERAPRLLS 136
>gi|188219579 ring finger protein 19B isoform b [Homo sapiens]
Length = 587
Score = 43.1 bits (100), Expect = 4e-04
Identities = 41/120 (34%), Positives = 48/120 (40%), Gaps = 17/120 (14%)
Query: 196 GRSRRLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVPF------PERLEAEGTVA 249
GR RRLT S+ + RA Q+ P+ PP + P PE L AE A
Sbjct: 28 GRRRRLTLHSVFSASARGRRARAKPQAEPPPPAAQPPPAPAPAAAQGPPPEALPAEP--A 85
Query: 250 LGRAGDALRLAAEYCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSLVLRPPGTALRQCS 309
+A AAE PG E+ GG PG V C L LV PP A R S
Sbjct: 86 AEAEAEAAAAAAE--PGFDD-------EEAAEGGGPGAEEVECPLCLVRLPPERAPRLLS 136
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 42.7 bits (99), Expect = 5e-04
Identities = 41/136 (30%), Positives = 54/136 (39%), Gaps = 26/136 (19%)
Query: 152 RAPGPATPAAPGCPRPP------------------QDALARRPRGCRLLRVPDGL--LSR 191
RAPG TP PG PRPP + LA R G +P+
Sbjct: 20 RAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGP 79
Query: 192 ALRAGRSRRLTRVRSVSSGNEDKERRAGS------QSPARAPSTSPPSSRVPFPERLEAE 245
AG S R R +SG ++ A + SP RA T+ P R+ AE
Sbjct: 80 TRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 139
Query: 246 GTVALGRAGDALRLAA 261
TVA G+A +A + +A
Sbjct: 140 ETVARGKATEAPKRSA 155
Score = 32.3 bits (72), Expect = 0.70
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 7/113 (6%)
Query: 126 PAPRPRAHTYGGGG----GPDALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCRL 181
P+P R GGG +L + +P + P+A G PR P +P+G +
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 279
Query: 182 LRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSS 234
LR P R + L + S SQ+P P+T SS
Sbjct: 280 LRPPQ---VTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSS 329
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 42.7 bits (99), Expect = 5e-04
Identities = 41/136 (30%), Positives = 54/136 (39%), Gaps = 26/136 (19%)
Query: 152 RAPGPATPAAPGCPRPP------------------QDALARRPRGCRLLRVPDGL--LSR 191
RAPG TP PG PRPP + LA R G +P+
Sbjct: 20 RAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGP 79
Query: 192 ALRAGRSRRLTRVRSVSSGNEDKERRAGS------QSPARAPSTSPPSSRVPFPERLEAE 245
AG S R R +SG ++ A + SP RA T+ P R+ AE
Sbjct: 80 TRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 139
Query: 246 GTVALGRAGDALRLAA 261
TVA G+A +A + +A
Sbjct: 140 ETVARGKATEAPKRSA 155
Score = 33.5 bits (75), Expect = 0.31
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 21/128 (16%)
Query: 126 PAPRPRAHTYGGGG----GPDALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCRL 181
P+P R GGG +L + +P + P+A G PR P +P+G +
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 279
Query: 182 LRVPD------------GLLSRALRAGRSRRLTRVRSVSSGNEDKERRAGSQSPARAPST 229
LR P G LS + A S T+ R V + A + PA P +
Sbjct: 280 LRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPD-----NAATPLPATLPPS 334
Query: 230 SPPSSRVP 237
P ++ +P
Sbjct: 335 PPLATPLP 342
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.7 bits (99), Expect = 5e-04
Identities = 40/135 (29%), Positives = 52/135 (38%), Gaps = 33/135 (24%)
Query: 152 RAPGPATPAAPGCPRPP------------------QDALARRPRGCRLLRVPDGL----- 188
RAPG TP PG PRPP + LA R G +P+
Sbjct: 20 RAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGP 79
Query: 189 --LSRALRAGRSRRLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVPFPERLEAEG 246
SR +GR R ++ S G SP RA T+ P R+ AE
Sbjct: 80 TRTSRPPASGRGERAPPAKNTSPG--------PVSSPGRASGTTRPGPLGQKGLRISAEE 131
Query: 247 TVALGRAGDALRLAA 261
TVA G+A +A + +A
Sbjct: 132 TVARGKATEAPKRSA 146
Score = 32.7 bits (73), Expect = 0.53
Identities = 32/119 (26%), Positives = 43/119 (36%), Gaps = 27/119 (22%)
Query: 126 PAPRPRAHTYGGGG----GPDALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCRL 181
P+P R GGG +L + +P + P+A G PR P +P+G +
Sbjct: 211 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 270
Query: 182 LRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAG--SQSPARAPSTS-PPSSRVP 237
LR P V+ +D G S SP PS S PPS P
Sbjct: 271 LRPP--------------------QVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAP 309
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 42.4 bits (98), Expect = 7e-04
Identities = 57/192 (29%), Positives = 72/192 (37%), Gaps = 43/192 (22%)
Query: 126 PAPRPRAHTYGGGGGPDALLGTLRVPRAPGPATPAAPGCPRPP--------QDALARRPR 177
P P + G G P A G L + + P PA P P PP D + RRP+
Sbjct: 854 PEGTPPSRGSSGEGLPFAEEGNLTIKQRPKPAGPPPRETPVPPGLDFNLTESDTVKRRPK 913
Query: 178 GCRLLRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVP 237
CR R P L AL A V S + G + P+ P SPP+S +P
Sbjct: 914 -CR-EREP---LQTALLA------FGVASATPG-------PAAPLPSPTPGESPPASSLP 955
Query: 238 FPE--RLEAEGTVALGRAGDALRLAAEYCPGTGRLRLRLLR----AESP----------- 280
PE L A+G A++ CPG G R E P
Sbjct: 956 QPEPSSLPAQGVPTPLAPSPAMQPPVPPCPGPGLESSAASRWNGETEPPAAPAALLKVPG 1015
Query: 281 AGGAPGPRAVSC 292
AG AP P +V+C
Sbjct: 1016 AGTAPKPVSVAC 1027
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 42.4 bits (98), Expect = 7e-04
Identities = 57/192 (29%), Positives = 72/192 (37%), Gaps = 43/192 (22%)
Query: 126 PAPRPRAHTYGGGGGPDALLGTLRVPRAPGPATPAAPGCPRPP--------QDALARRPR 177
P P + G G P A G L + + P PA P P PP D + RRP+
Sbjct: 936 PEGTPPSRGSSGEGLPFAEEGNLTIKQRPKPAGPPPRETPVPPGLDFNLTESDTVKRRPK 995
Query: 178 GCRLLRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVP 237
CR R P L AL A V S + G + P+ P SPP+S +P
Sbjct: 996 -CR-EREP---LQTALLA------FGVASATPG-------PAAPLPSPTPGESPPASSLP 1037
Query: 238 FPE--RLEAEGTVALGRAGDALRLAAEYCPGTGRLRLRLLR----AESP----------- 280
PE L A+G A++ CPG G R E P
Sbjct: 1038 QPEPSSLPAQGVPTPLAPSPAMQPPVPPCPGPGLESSAASRWNGETEPPAAPAALLKVPG 1097
Query: 281 AGGAPGPRAVSC 292
AG AP P +V+C
Sbjct: 1098 AGTAPKPVSVAC 1109
>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
Length = 1397
Score = 42.0 bits (97), Expect = 9e-04
Identities = 58/222 (26%), Positives = 76/222 (34%), Gaps = 34/222 (15%)
Query: 98 RVRTAYGFCALLESPHTRRKESLLLGGPPAPRPRAHTYGGGGGPDALLGTLRVPRAP--G 155
R A F + + +R+E+ LG + G G A GT P+ P G
Sbjct: 1067 REMLAISFISAVNRKRKKRREARGLGSSTDDDSEQEAHKPGAGATAP-GTQERPQGPLPG 1125
Query: 156 PATPAAPGCPRPPQDALARRPRGCRLLRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKE 215
P APG PP A RP +R++ +G S T RSV SG +
Sbjct: 1126 AVAPEAPGRLSPPA-APEERPAAD----------TRSIVSGYSTLSTMDRSVCSGASGRR 1174
Query: 216 RRAGSQSPARAPSTSPPSSRVPFPERLEAEGTVALGRAGDALRLAA------EYCPGTGR 269
AG ++ S + + EG G G R + C R
Sbjct: 1175 AGAGDEADDERSELSHVET--------DTEGAAGAGPGGRLTRRPSFSSHHLMPCDTLAR 1226
Query: 270 LRLRLLRAESPAGGAPGPRA------VSCRLSLVLRPPGTAL 305
RL R + G GPRA S LRPP AL
Sbjct: 1227 RRLARGRPDGEGAGRGGPRAPEPPGSASSSSQESLRPPAAAL 1268
Score = 34.3 bits (77), Expect = 0.18
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 137 GGGGPDALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCRLLRV-----PDGLLSR 191
G GGP R P PG A+ ++ RPP ALA RP LR+ D +L+
Sbjct: 1240 GRGGP-------RAPEPPGSASSSSQESLRPPAAALASRPSRMEALRLRLRGTADDMLAV 1292
Query: 192 ALRAGRSRRLTRVRS 206
LR S R RS
Sbjct: 1293 RLRRPLSPETRRRRS 1307
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 40.8 bits (94), Expect = 0.002
Identities = 51/163 (31%), Positives = 58/163 (35%), Gaps = 10/163 (6%)
Query: 129 RPRAHTYGGGGGPDALLGTLR-VPRAPGPATPAAPG-CPRPPQDALARRP-RGCRLLRVP 185
R R H GGGGG G R RAPG TPA P PRPP A P R +
Sbjct: 3 RKRPHQQGGGGGGGQ--GRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAA 60
Query: 186 DGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVPFPERLEAE 245
+ S A +R R + + G + G PS PP S P
Sbjct: 61 GAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQ----PSVRPPLSHRPLRGGGMGR 116
Query: 246 GTVALGRAGDALRLAAEYCPGTGRLRLRLLRAESPAGGAPGPR 288
G G + R PG R L L A PA G G R
Sbjct: 117 GRPGKGPPPNPSRRLPPAPPGGRRTWLSAL-ATGPAAGGAGRR 158
>gi|169211642 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 40.4 bits (93), Expect = 0.003
Identities = 44/143 (30%), Positives = 57/143 (39%), Gaps = 25/143 (17%)
Query: 154 PGPATPAAPGCPRPPQDALARRPR--------GCRLLRVP-DGLLSRALRAGRSRRLTRV 204
P PA A+PG P P + A +P G RL V DG A A RS +
Sbjct: 249 PQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARS---PQA 305
Query: 205 RSVSSGNEDKERRAGSQSPARAPSTSPPSSRVPFPERLEAEGTVALGRAGDALRLAAEYC 264
S G+ R+ G +P AP SP P+ +A + LA E+
Sbjct: 306 GPGSEGSRPSSRKRGEAAP--APPKSPNRQPFVLPDVSKASSPL----------LAREFL 353
Query: 265 PGTGRLRLRLLRAESPAGGAPGP 287
G R L L R +SP+ PGP
Sbjct: 354 RGAERGHL-LYREDSPSRSWPGP 375
>gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase
PRKX (Protein kinase PKX1) [Homo sapiens]
Length = 330
Score = 40.4 bits (93), Expect = 0.003
Identities = 61/221 (27%), Positives = 79/221 (35%), Gaps = 53/221 (23%)
Query: 97 PRVRTAYGFCALLESPHTRRKESLLLGG------PPAPRPR----------AHTYGGGGG 140
P GF ++ T + + L+GG PPAPRPR A Y GG
Sbjct: 4 PNASACSGFLQTSDNLGTIKAKHSLVGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGG 63
Query: 141 PDALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCRLL------------------ 182
G + PR A AAP P + ++ PRG RLL
Sbjct: 64 RGRETGNAQGPRLALQARAAAPAFPAASRRSVP-APRGRRLLLPGAVAACAVSDGQPLSP 122
Query: 183 ---------RVPDG-LLSRALRAGRS----RRLTRVRSVSSGNEDKERRAGSQSPARAPS 228
R P+G L S LRAG + + R S A S + AR P
Sbjct: 123 PLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAAS-AEARLPE 181
Query: 229 TSPPSSRVPFPE--RLEAEGTVALGRAGDALRLAAEYCPGT 267
S P+ R P PE ++A G A + A E CP +
Sbjct: 182 RSGPARR-PGPECVPMKAPGLAQAAVAEETPDWAPELCPSS 221
>gi|169210857 PREDICTED: similar to RIKEN cDNA E130309D14 [Homo
sapiens]
Length = 378
Score = 40.4 bits (93), Expect = 0.003
Identities = 44/143 (30%), Positives = 57/143 (39%), Gaps = 25/143 (17%)
Query: 154 PGPATPAAPGCPRPPQDALARRPR--------GCRLLRVP-DGLLSRALRAGRSRRLTRV 204
P PA A+PG P P + A +P G RL V DG A A RS +
Sbjct: 249 PQPAPAASPGAPGPSRPAARAQPAQRARGPGVGARLAGVTRDGRGGPARDAARS---PQA 305
Query: 205 RSVSSGNEDKERRAGSQSPARAPSTSPPSSRVPFPERLEAEGTVALGRAGDALRLAAEYC 264
S G+ R+ G +P AP SP P+ +A + LA E+
Sbjct: 306 GPGSEGSRPSSRKRGEAAP--APPKSPNRQPFVLPDVSKASSPL----------LAREFL 353
Query: 265 PGTGRLRLRLLRAESPAGGAPGP 287
G R L L R +SP+ PGP
Sbjct: 354 RGAERGHL-LYREDSPSRSWPGP 375
>gi|38327539 inositol polyphosphate-5-phosphatase E [Homo sapiens]
Length = 644
Score = 40.0 bits (92), Expect = 0.003
Identities = 68/257 (26%), Positives = 92/257 (35%), Gaps = 40/257 (15%)
Query: 110 ESPHTRRKESLLLGGPPAPRPRAHTYGGGGGPDALL-GTLRVPRAPGPATPAAPGCPRPP 168
+ P R + L G PPA R + G AL T P P AAP PRPP
Sbjct: 16 QPPEGRTLQGQLPGAPPAQRAGSPPDAPGSESPALACSTPATPSGEDPPARAAPIAPRPP 75
Query: 169 QDALARRPRGCRLLRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAGSQSP-ARAP 227
RPR R L + D + R R R +G S+ P A A
Sbjct: 76 -----ARPRLERALSLDD----KGWRRRRFRGSQEDLEARNGTSPSRGSVQSEGPGAPAH 126
Query: 228 STSPPSSRVPFPERLEAEGTVALGR-----AGDALRLAAEYCPGTGRLRLRLLRAESPAG 282
S SPP E ++ G ++ R G+ L A P R + AG
Sbjct: 127 SCSPPCLSTSLQEIPKSRGVLSSERGSPSSGGNPLSGVASSSPNLPH------RDAAVAG 180
Query: 283 GAPGPRAVSCRLSLVL---RPPGTALRQCSTVVGRSRKASFDQDFCFDGLSEDEVRRLAV 339
+P RL +L PP +L S + + K D L++ ++R +
Sbjct: 181 SSP-------RLPSLLPPRPPPALSLDIASDSLRTANKVDSD-------LADYKLRAQPL 226
Query: 340 RVKARDE-GRGRERGRL 355
V+A G GR R L
Sbjct: 227 LVRAHSSLGPGRPRSPL 243
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 39.7 bits (91), Expect = 0.004
Identities = 66/288 (22%), Positives = 95/288 (32%), Gaps = 44/288 (15%)
Query: 26 ARGAKSRTTAACANVLTPDRIPEFCIPPRLMPRLALAALRNSWVEEAGMDEGAGRTDWDP 85
+R + +RT + +TP PPR P S GM A T D
Sbjct: 153 SRASLTRTPPRASLTMTPSTASLTRTPPRASP-----TGMPSRTSPTGMPSTASLTKMDS 207
Query: 86 RSQAALSLPHLPRVRTAYGFCALLESPHTRRK----ESLLLGGPPAPRPRAHTYGGG-GG 140
+ +L T P +LL+ PP P
Sbjct: 208 TASITRTLSRASPTGTPPRASPTGSPPRASLSMMPSTALLIRTPPRASPTGMLSRTSLTK 267
Query: 141 PDALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCRLLRV-----PDGLLSRALRA 195
D+ R P P A+P P + +L+ P L+R+ P G+LSR
Sbjct: 268 MDSTASITRTPSRPSTASPTGT----PSRASLSMTPSTASLMRMLPRASPTGMLSRT--- 320
Query: 196 GRSRRLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVPFPERLEAEGTVALGRAGD 255
LT++ S +S + R + +++P+RA T PS+ P G
Sbjct: 321 ----SLTKMDSTASISRTPPRASITRTPSRASPTGKPSTASP---------------TGT 361
Query: 256 ALRLAAEYCPGTGRLRLRLLRAESPAGGAP--GPRAVSCRLSLVLRPP 301
R + P T L L SP G P P SL +PP
Sbjct: 362 PSRASPTGSPSTASL-TGLSSTASPTGTPPRASPTGTPSTASLTRKPP 408
Score = 32.0 bits (71), Expect = 0.91
Identities = 37/127 (29%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 139 GGPDALLGTLRVPRAPGPATPAAPGCPRPPQDA---------LARRPRGCRLLRV----- 184
G P L RA TP+ R P A L R P L R+
Sbjct: 531 GSPSTALAMGSPSRAALTRTPSRASLTRTPSRASLTTPSRASLTRTPSTVLLTRMPPSAS 590
Query: 185 PDGLLSRALRAG--RSRRLTRVRSVSSGNEDKERRAGSQSPARA-PSTSPP-SSRVPFPE 240
P G+ SR G S LT++ S +S R + +++P RA P+ +PP +S P
Sbjct: 591 PTGMPSRTSPTGMPSSALLTKMDSTASITRTPPRASPTETPPRASPTGTPPRASPTGTPP 650
Query: 241 RLEAEGT 247
R GT
Sbjct: 651 RASPTGT 657
>gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo
sapiens]
Length = 782
Score = 38.9 bits (89), Expect = 0.007
Identities = 47/195 (24%), Positives = 68/195 (34%), Gaps = 43/195 (22%)
Query: 109 LESPHTRRKESLLLGGPPAPRPRAHTYGGGGGPDALLGTLRVP----------RAPGPAT 158
LE T+ KE L P P P+ P L + P R P P +
Sbjct: 456 LEGTSTQAKELRLARITPTPSPKLPE------PSVLSEVTKPPPCLENSSPPSRIPEPES 509
Query: 159 PAAPGCPR----PPQDALARRPRGCRLLRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDK 214
PA P P PP D+ RR +R + S + R RSR + + R + G
Sbjct: 510 PAKPNVPTASTAPPADSRDRRRSYQMPVRDEE---SESQRKARSRLMRQSRRSTQGVTLT 566
Query: 215 ERRAGSQSPARAPSTSPPSSRVPFPERLEAEGTVALGRAGDALRLAAEYCPGTGRLRLRL 274
+ + ++ +AP + P+ + R PG
Sbjct: 567 DLKEAEKAAGKAPESEKPAQSLDPSRRPRV--------------------PGVENSDSPA 606
Query: 275 LRAESPAGGAPGPRA 289
RAE+P G PGP+A
Sbjct: 607 QRAEAPDGQGPGPQA 621
>gi|239755232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 501
Score = 38.5 bits (88), Expect = 0.010
Identities = 49/167 (29%), Positives = 59/167 (35%), Gaps = 27/167 (16%)
Query: 125 PPAPRPRAHTYGGGGGPDALLGTL----RVPRAPGPATPAAP------GCPRPPQDALA- 173
PP PRPR H L L R+ R P P A G P P AL
Sbjct: 305 PPLPRPRPHLLTRCPPRAPRLRRLEAGRRLRRTAAPLGPVAGAGSSFGGRPHRPSLALGS 364
Query: 174 --RRPRGCRLLRVPDGLLSRALRAGRSRRL--TRVRSVSSGNEDKERRAGSQ-------S 222
R P L L + A+R + L + R+ G D+ RR G +
Sbjct: 365 DRRSPEAPHYL-----LWAAAVRGQEAHSLWPLQPRARRQGGSDRHRRRGQSGASGLGTA 419
Query: 223 PARAPSTSPPSSRVPFPERLEAEGTVALGRAGDALRLAAEYCPGTGR 269
A A TSP +R P P RL LG AG L P G+
Sbjct: 420 AAGAERTSPVGARPPPPARLVTNTAPTLGGAGPRLEGRGGAAPPAGK 466
>gi|239749768 PREDICTED: hypothetical protein [Homo sapiens]
Length = 591
Score = 38.5 bits (88), Expect = 0.010
Identities = 49/167 (29%), Positives = 59/167 (35%), Gaps = 27/167 (16%)
Query: 125 PPAPRPRAHTYGGGGGPDALLGTL----RVPRAPGPATPAAP------GCPRPPQDALA- 173
PP PRPR H L L R+ R P P A G P P AL
Sbjct: 395 PPLPRPRPHLLTRCPPRAPRLRRLEAGRRLRRTAAPLGPVAGAGSSFGGRPHRPSLALGS 454
Query: 174 --RRPRGCRLLRVPDGLLSRALRAGRSRRL--TRVRSVSSGNEDKERRAGSQ-------S 222
R P L L + A+R + L + R+ G D+ RR G +
Sbjct: 455 DRRSPEAPHYL-----LWAAAVRGQEAHSLWPLQPRARRQGGSDRHRRRGQSGASGLGTA 509
Query: 223 PARAPSTSPPSSRVPFPERLEAEGTVALGRAGDALRLAAEYCPGTGR 269
A A TSP +R P P RL LG AG L P G+
Sbjct: 510 AAGAERTSPVGARPPPPARLVTNTAPTLGGAGPRLEGRGGAAPPAGK 556
>gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo
sapiens]
Length = 591
Score = 38.5 bits (88), Expect = 0.010
Identities = 49/167 (29%), Positives = 59/167 (35%), Gaps = 27/167 (16%)
Query: 125 PPAPRPRAHTYGGGGGPDALLGTL----RVPRAPGPATPAAP------GCPRPPQDALA- 173
PP PRPR H L L R+ R P P A G P P AL
Sbjct: 395 PPLPRPRPHLLTRCPPRAPRLRRLEAGRRLRRTAAPLGPVAGAGSSFGGRPHRPSLALGS 454
Query: 174 --RRPRGCRLLRVPDGLLSRALRAGRSRRL--TRVRSVSSGNEDKERRAGSQ-------S 222
R P L L + A+R + L + R+ G D+ RR G +
Sbjct: 455 DRRSPEAPHYL-----LWAAAVRGQEAHSLWPLQPRARRQGGSDRHRRRGQSGASGLGTA 509
Query: 223 PARAPSTSPPSSRVPFPERLEAEGTVALGRAGDALRLAAEYCPGTGR 269
A A TSP +R P P RL LG AG L P G+
Sbjct: 510 AAGAERTSPVGARPPPPARLVTNTAPTLGGAGPRLEGRGGAAPPAGK 556
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 38.5 bits (88), Expect = 0.010
Identities = 33/91 (36%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 100 RTAYGFCALLESPHTRRKE-SLLLGGP----PAPRPRAH-------TYGGGGGPDALLGT 147
+T G ALL S H SL+ GP P P+P A + G P A
Sbjct: 196 QTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAP 255
Query: 148 LRVPRAPGPATPAAPGCPRPPQDALARRPRG 178
P AP PA PAA P PP A RP G
Sbjct: 256 -SPPAAPAPAAPAAAPPPPPPAPATLARPPG 285
Score = 37.0 bits (84), Expect = 0.028
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 7/56 (12%)
Query: 123 GGPPAPRPRAHTYGGGGGPDALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRG 178
G P P P GGGGP P P P P P P PP L P G
Sbjct: 84 GAAPEPPPAGRARPGGGGPQR-------PGPPSPRRPLVPAGPAPPAAKLRPPPEG 132
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 38.5 bits (88), Expect = 0.010
Identities = 64/209 (30%), Positives = 76/209 (36%), Gaps = 30/209 (14%)
Query: 127 APRPRAHTYGGGGGPDALLGTLRVPRA-----PGPATPAAPGCPRPPQDALARRPRGCRL 181
AP P A GG GP+A R RA P P A PRP P
Sbjct: 189 APYPTA---GGSAGPEACSSAERRARAGPFLTPSPLHAVAMRSPRPCGRPPTDSPDAGGA 245
Query: 182 LRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAGS--QSPARAPSTSPPSSRVPFP 239
R DG +S LR R R + R+ G + RR S Q P A S SP S+R
Sbjct: 246 GRPLDGYISALLRRRRRRGAGQPRTSPGGADGGPRRQNSVRQRPPDA-SPSPGSARPARE 304
Query: 240 ERLEAEG-----TVALGRAGDALRLAAEYCPGTGRLRLRLLRAESPAGG-------APGP 287
LE G AL RA A +E P +SPA G PG
Sbjct: 305 PSLERVGGHPTSPAALSRAW-ASSWESEAAPEPAAPPAAPSPPDSPAEGRLVKAQYIPGA 363
Query: 288 RAVSCRLSLVLRPPGTALRQCSTVVGRSR 316
+A + L PG A R+ + R R
Sbjct: 364 QAATRGL------PGRAARRKPPPLTRGR 386
Score = 30.0 bits (66), Expect = 3.5
Identities = 72/255 (28%), Positives = 86/255 (33%), Gaps = 55/255 (21%)
Query: 22 LPGRARGAKSRTTAACANVLTPDRIPEFCIPPRLMPRLALAALRNSWVEEAGMDEGAGRT 81
LPGRA K LT R E PPR PR AA R + EA G+ R
Sbjct: 370 LPGRAARRKPPP-------LTRGRSVEQS-PPRERPR---AAGRRGRMAEASGRRGSPRA 418
Query: 82 DWDPRSQAALSLPHLPRVRTAYGFCALLES-----PHTRRKESLLLGGPPAPRPR----- 131
RSQ+ SL G + + S P R+E P PRPR
Sbjct: 419 RKASRSQSETSL---------LGRASAVPSGPPKYPTAEREE------PRPPRPRRGPAP 463
Query: 132 ---------AHTYGGGGGPDALLGTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCRLL 182
+ DA G PRAP P P PQ L GC
Sbjct: 464 TLAAQAAGSCRRWRSTAEIDAADGRRVRPRAPAARVPGPGPSPSAPQRRLL---YGC--- 517
Query: 183 RVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAG-SQSPA--RAPSTSPPSSRVPFP 239
A R G R V G + E A +SPA A S S S + +P
Sbjct: 518 -AGSDSECSAGRLGPLGRRGPAGGVGGGYGESESSASEGESPAFSSASSDSDGSGGLVWP 576
Query: 240 ERLEAEGTVALGRAG 254
++L A + G AG
Sbjct: 577 QQLVAATAASGGGAG 591
>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
sapiens]
Length = 2564
Score = 38.5 bits (88), Expect = 0.010
Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 155 GPATPAAPGCPRPPQDALARRPRGCRL-LRVPDGLLSRALRAGRSRRLTRVRSVSSGNED 213
GP PA P P+P + R P G L R P RA + RR R R G
Sbjct: 2336 GPGLPAGPSLPQPRELPPGRLPNGLELPERTPRPDRPRARDRPKPRRRPRPREGGEGGGS 2395
Query: 214 KERRAGSQSPARAPSTSPPSSRVPFPERLEAEGTVALGRAGDALR 258
+ R+ AP+ PP + ++ EG + R DA R
Sbjct: 2396 RRSRSAPAQGGSAPAPPPPPTHT-----VQHEGFLLRKRELDANR 2435
>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
Length = 694
Score = 38.1 bits (87), Expect = 0.013
Identities = 42/212 (19%), Positives = 83/212 (39%), Gaps = 14/212 (6%)
Query: 146 GTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCRLLRVPDGLLSRALRAGRSRRLTRVR 205
G+++ P P P P PG RP R P + D + R R+ +
Sbjct: 281 GSVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKPEVAPSDPGTTAPPREERTGGVGGYP 340
Query: 206 SVSSGNEDKERRAGSQSPARAPSTSPPSSRVPFPERLEAEGTVAL----GRAGDALRLAA 261
+V + + +G S A A + P ++R P P E E + AL +
Sbjct: 341 AVGAREDRMSHPSGPYSQASAAAPQPAAARQPPPPEEEEEEANSYDSDEATTLGALEFSL 400
Query: 262 EYCPGTGRLRLRLLRAES----PAGGAPGPRAVSCRLSLVLRPPGTALRQCST-VVGRSR 316
Y L+ +++A+ + G P + L L P + + T + +R
Sbjct: 401 LYDQDNSSLQCTIIKAKGLKPMDSNGLADP-----YVKLHLLPGASKSNKLRTKTLRNTR 455
Query: 317 KASFDQDFCFDGLSEDEVRRLAVRVKARDEGR 348
+++ + G+++++++R +R+ DE +
Sbjct: 456 NPIWNETLVYHGITDEDMQRKTLRISVCDEDK 487
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,516,723
Number of Sequences: 37866
Number of extensions: 1130274
Number of successful extensions: 8355
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 481
Number of HSP's that attempted gapping in prelim test: 7260
Number of HSP's gapped (non-prelim): 1420
length of query: 369
length of database: 18,247,518
effective HSP length: 104
effective length of query: 265
effective length of database: 14,309,454
effective search space: 3792005310
effective search space used: 3792005310
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.