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Search of human proteins with 145976942
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145976942 transcription factor NF-E4 [Homo sapiens]
(179 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145976942 transcription factor NF-E4 [Homo sapiens] 371 e-103
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 33 0.13
gi|91199550 CD68 antigen isoform B [Homo sapiens] 32 0.22
gi|91199548 CD68 antigen isoform A [Homo sapiens] 32 0.22
gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo sa... 32 0.38
gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo s... 32 0.38
gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo s... 32 0.38
gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo s... 32 0.38
gi|194272180 plexin B1 [Homo sapiens] 32 0.38
gi|40254442 plexin B1 [Homo sapiens] 32 0.38
gi|239756153 PREDICTED: hypothetical protein [Homo sapiens] 30 0.85
gi|239750693 PREDICTED: hypothetical protein [Homo sapiens] 30 0.85
gi|239745001 PREDICTED: hypothetical protein XP_002343291 [Homo ... 30 0.85
gi|21687062 hypothetical protein LOC124402 [Homo sapiens] 30 0.85
gi|31543543 retinoic acid induced 17 [Homo sapiens] 30 1.1
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 30 1.1
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 30 1.1
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 30 1.1
gi|91982772 mucin 17 [Homo sapiens] 30 1.4
gi|27886561 nuclear factor of activated T-cells, cytoplasmic, ca... 29 1.9
gi|27886559 nuclear factor of activated T-cells, cytoplasmic, ca... 29 1.9
gi|27886555 nuclear factor of activated T-cells, cytoplasmic, ca... 29 1.9
gi|4758804 nuclear factor of activated T-cells, cytoplasmic, cal... 29 1.9
gi|239753480 PREDICTED: hypothetical protein [Homo sapiens] 29 1.9
gi|62945417 dystrophia myotonica-containing WD repeat motif prot... 29 1.9
gi|4504649 interleukin 15 receptor, alpha isoform 1 precursor [H... 29 2.5
gi|26787982 interleukin 15 receptor, alpha isoform 2 [Homo sapiens] 29 2.5
gi|189491742 ataxin 7 isoform b [Homo sapiens] 29 2.5
gi|4506797 ataxin 7 isoform a [Homo sapiens] 29 2.5
gi|77681565 NG5 protein [Homo sapiens] 29 2.5
>gi|145976942 transcription factor NF-E4 [Homo sapiens]
Length = 179
Score = 371 bits (952), Expect = e-103
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MPRVVCWHTLKSLNGYKNLSSGAETREGLRSSSPVDLPLRPRKQATAAGQRKLLSLQLLL 60
MPRVVCWHTLKSLNGYKNLSSGAETREGLRSSSPVDLPLRPRKQATAAGQRKLLSLQLLL
Sbjct: 1 MPRVVCWHTLKSLNGYKNLSSGAETREGLRSSSPVDLPLRPRKQATAAGQRKLLSLQLLL 60
Query: 61 CACTSVTDLTYWGPAGHGATAPHRSLLAIHLHLVPASSAAMKATGPHNAQTQVNPRGHAP 120
CACTSVTDLTYWGPAGHGATAPHRSLLAIHLHLVPASSAAMKATGPHNAQTQVNPRGHAP
Sbjct: 61 CACTSVTDLTYWGPAGHGATAPHRSLLAIHLHLVPASSAAMKATGPHNAQTQVNPRGHAP 120
Query: 121 SAEDPTGSWTVSGPCKDHPHPFLSQSNPPTRISSALPLKTDSALEQTPQQLPSLHLSQG 179
SAEDPTGSWTVSGPCKDHPHPFLSQSNPPTRISSALPLKTDSALEQTPQQLPSLHLSQG
Sbjct: 121 SAEDPTGSWTVSGPCKDHPHPFLSQSNPPTRISSALPLKTDSALEQTPQQLPSLHLSQG 179
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 33.1 bits (74), Expect = 0.13
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 95 PASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPCKDHPHPFLSQSNPPTRISS 154
P S TG + Q+Q N + + W + P +HP P +S+PP +SS
Sbjct: 1278 PHLSTCGLGTGEESRQSQANAPVYQQNVLHTGKRWFIICPVAEHPAPEAPESSPPLPLSS 1337
Query: 155 ALP 157
P
Sbjct: 1338 LPP 1340
>gi|91199550 CD68 antigen isoform B [Homo sapiens]
Length = 327
Score = 32.3 bits (72), Expect = 0.22
Identities = 30/118 (25%), Positives = 42/118 (35%), Gaps = 14/118 (11%)
Query: 64 TSVTDLTYWGP--AGHGATAPHRSLLAIHLHLVPASSAAMKATGPHNAQTQVNPRGHAPS 121
T+ T T GP A H T + +H P S++ + GP A H +
Sbjct: 37 TTTTGTTSHGPTTATHNPTTTSHGNVTVH----PTSNSTATSQGPSTATHSPATTSHGNA 92
Query: 122 AEDPTGSWTVSGP---CKDHPHPFLSQSNPPTRISSALPLKTDSALEQTPQQLPSLHL 176
PT + T + P HP P PP+ S +T T P +HL
Sbjct: 93 TVHPTSNSTATSPGFTSSAHPEP-----PPPSPSPSPTSKETIGDYTWTNGSQPCVHL 145
>gi|91199548 CD68 antigen isoform A [Homo sapiens]
Length = 354
Score = 32.3 bits (72), Expect = 0.22
Identities = 30/118 (25%), Positives = 42/118 (35%), Gaps = 14/118 (11%)
Query: 64 TSVTDLTYWGP--AGHGATAPHRSLLAIHLHLVPASSAAMKATGPHNAQTQVNPRGHAPS 121
T+ T T GP A H T + +H P S++ + GP A H +
Sbjct: 64 TTTTGTTSHGPTTATHNPTTTSHGNVTVH----PTSNSTATSQGPSTATHSPATTSHGNA 119
Query: 122 AEDPTGSWTVSGP---CKDHPHPFLSQSNPPTRISSALPLKTDSALEQTPQQLPSLHL 176
PT + T + P HP P PP+ S +T T P +HL
Sbjct: 120 TVHPTSNSTATSPGFTSSAHPEP-----PPPSPSPSPTSKETIGDYTWTNGSQPCVHL 172
>gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo
sapiens]
Length = 630
Score = 31.6 bits (70), Expect = 0.38
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 91 LHLVPASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPCKDHPHPFLSQSNPPT 150
++ ++S ++ PH T+ P G P A + GP + HP+P L PPT
Sbjct: 491 VYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAE--------GP-EVHPNPLLWMP-PPT 540
Query: 151 RISSA 155
RI SA
Sbjct: 541 RIPSA 545
>gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo
sapiens]
Length = 618
Score = 31.6 bits (70), Expect = 0.38
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 91 LHLVPASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPCKDHPHPFLSQSNPPT 150
++ ++S ++ PH T+ P G P A + GP + HP+P L PPT
Sbjct: 479 VYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAE--------GP-EVHPNPLLWMP-PPT 528
Query: 151 RISSA 155
RI SA
Sbjct: 529 RIPSA 533
>gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo
sapiens]
Length = 649
Score = 31.6 bits (70), Expect = 0.38
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 91 LHLVPASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPCKDHPHPFLSQSNPPT 150
++ ++S ++ PH T+ P G P A + GP + HP+P L PPT
Sbjct: 479 VYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAE--------GP-EVHPNPLLWMP-PPT 528
Query: 151 RISSA 155
RI SA
Sbjct: 529 RIPSA 533
>gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo
sapiens]
Length = 661
Score = 31.6 bits (70), Expect = 0.38
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 91 LHLVPASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPCKDHPHPFLSQSNPPT 150
++ ++S ++ PH T+ P G P A + GP + HP+P L PPT
Sbjct: 491 VYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAE--------GP-EVHPNPLLWMP-PPT 540
Query: 151 RISSA 155
RI SA
Sbjct: 541 RIPSA 545
>gi|194272180 plexin B1 [Homo sapiens]
Length = 2135
Score = 31.6 bits (70), Expect = 0.38
Identities = 33/115 (28%), Positives = 43/115 (37%), Gaps = 20/115 (17%)
Query: 73 GPAGHGATAPHRSLLAIHLHLVPASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVS 132
GP+ TAP ++L +P A P A G +PS P G W S
Sbjct: 689 GPSPSPPTAP-KALATPAPDTLPVEPGA-----PSTATASDISPGASPSLLSPWGPWAGS 742
Query: 133 G----------PCKDHPHPFLSQSNPPTRISSALPLKTDSALEQTPQQLPSLHLS 177
G P + P P Q+ P T A+P TD TP+ L + LS
Sbjct: 743 GSISSPGSTGSPLHEEPSPPSPQNGPGT----AVPAPTDFRPSATPEDLLASPLS 793
>gi|40254442 plexin B1 [Homo sapiens]
Length = 2135
Score = 31.6 bits (70), Expect = 0.38
Identities = 33/115 (28%), Positives = 43/115 (37%), Gaps = 20/115 (17%)
Query: 73 GPAGHGATAPHRSLLAIHLHLVPASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVS 132
GP+ TAP ++L +P A P A G +PS P G W S
Sbjct: 689 GPSPSPPTAP-KALATPAPDTLPVEPGA-----PSTATASDISPGASPSLLSPWGPWAGS 742
Query: 133 G----------PCKDHPHPFLSQSNPPTRISSALPLKTDSALEQTPQQLPSLHLS 177
G P + P P Q+ P T A+P TD TP+ L + LS
Sbjct: 743 GSISSPGSTGSPLHEEPSPPSPQNGPGT----AVPAPTDFRPSATPEDLLASPLS 793
>gi|239756153 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 30.4 bits (67), Expect = 0.85
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 71 YWGPAGHGA--TAPHRS----LLAIHL-HLVPASSAAMKAT--GPHNAQTQVNPRGHAPS 121
YW PA G T P S HL HL P ++A A+ G HNA V+P G
Sbjct: 25 YWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANALRSASCHGLHNASPGVSPSGGGGD 84
Query: 122 AEDPTGS 128
+E GS
Sbjct: 85 SERVRGS 91
>gi|239750693 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 30.4 bits (67), Expect = 0.85
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 71 YWGPAGHGA--TAPHRS----LLAIHL-HLVPASSAAMKAT--GPHNAQTQVNPRGHAPS 121
YW PA G T P S HL HL P ++A A+ G HNA V+P G
Sbjct: 25 YWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANALRSASCHGLHNASPGVSPSGGGGD 84
Query: 122 AEDPTGS 128
+E GS
Sbjct: 85 SERVRGS 91
>gi|239745001 PREDICTED: hypothetical protein XP_002343291 [Homo
sapiens]
Length = 150
Score = 30.4 bits (67), Expect = 0.85
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 71 YWGPAGHGA--TAPHRS----LLAIHL-HLVPASSAAMKAT--GPHNAQTQVNPRGHAPS 121
YW PA G T P S HL HL P ++A A+ G HNA V+P G
Sbjct: 25 YWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANALRSASCHGLHNASPGVSPSGGGGD 84
Query: 122 AEDPTGS 128
+E GS
Sbjct: 85 SERVRGS 91
>gi|21687062 hypothetical protein LOC124402 [Homo sapiens]
Length = 177
Score = 30.4 bits (67), Expect = 0.85
Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 10/110 (9%)
Query: 74 PAGHGATAPH-RSLLAIHLHLVPASSAAMKATGPHNAQTQVNPRGHAPSAED-------- 124
PA AT P+ L + L + S +G A T +P H P A
Sbjct: 65 PANTPATPPNFPDALTMFSRLKASESFHSGGSGSPMAATATSPPPHFPHAATSSSAASSW 124
Query: 125 PTGSWTVSGPCKDHPHPFLSQSNPPTRISSALPLKTDSALEQTPQQLPSL 174
PT + GP P P L PP+ S PL A + P+ P++
Sbjct: 125 PTAASPPGGPQHHQPQPPLWTPTPPSPASDWPPLAPQQATSE-PRAHPAM 173
>gi|31543543 retinoic acid induced 17 [Homo sapiens]
Length = 1067
Score = 30.0 bits (66), Expect = 1.1
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 94 VPASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPCKDHPHPFLSQSNPPTRIS 153
+P + AA++ H Q + HA S++ P S PHP SQS PP S
Sbjct: 927 MPNNMAALEKPLSHPMQETMP---HAGSSDQPHPSIQQG---LHVPHPS-SQSGPPLHHS 979
Query: 154 SALPLKTDSALEQTPQQLPSLH 175
A P Q PQ PS H
Sbjct: 980 GAPPPPPSQPPRQPPQAAPSSH 1001
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 30.0 bits (66), Expect = 1.1
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 90 HLHLVPASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTV-SGPCKDHPHPFLSQSNP 148
H L P + +A + + P +AQ ++ +G P G ++ +GP HP P P
Sbjct: 269 HPPLQPLTGSAGQPSAPSHAQPPLHGQG-------PPGPHSLQAGPLLQHPGPPQPFGLP 321
Query: 149 PTRISSALPLKTD--SALEQTPQQLPS 173
P PL T +A T QLP+
Sbjct: 322 PQASQGQAPLGTSPAAAYPHTSLQLPA 348
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 30.0 bits (66), Expect = 1.1
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 90 HLHLVPASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTV-SGPCKDHPHPFLSQSNP 148
H L P + +A + + P +AQ ++ +G P G ++ +GP HP P P
Sbjct: 823 HPPLQPLTGSAGQPSAPSHAQPPLHGQG-------PPGPHSLQAGPLLQHPGPPQPFGLP 875
Query: 149 PTRISSALPLKTD--SALEQTPQQLPS 173
P PL T +A T QLP+
Sbjct: 876 PQASQGQAPLGTSPAAAYPHTSLQLPA 902
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 30.0 bits (66), Expect = 1.1
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 90 HLHLVPASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTV-SGPCKDHPHPFLSQSNP 148
H L P + +A + + P +AQ ++ +G P G ++ +GP HP P P
Sbjct: 823 HPPLQPLTGSAGQPSAPSHAQPPLHGQG-------PPGPHSLQAGPLLQHPGPPQPFGLP 875
Query: 149 PTRISSALPLKTD--SALEQTPQQLPS 173
P PL T +A T QLP+
Sbjct: 876 PQASQGQAPLGTSPAAAYPHTSLQLPA 902
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 29.6 bits (65), Expect = 1.4
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 97 SSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPCKDHPHPFLSQSNPPTRISSAL 156
S++ + AT + T V R PS+E S T++ P S PPT +S+
Sbjct: 4024 SASTLSATSTPHTSTSVTTRPVTPSSESSRPS-TITSHTIPPTFPPAHSSTPPTTSASST 4082
Query: 157 PLKTDSALEQTPQQLPS 173
+ ++ T + PS
Sbjct: 4083 TVNPEAVTTMTTRTKPS 4099
>gi|27886561 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 1 [Homo sapiens]
Length = 1075
Score = 29.3 bits (64), Expect = 1.9
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 80 TAPHRSLLAIHLHLVP----ASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPC 135
T PH + H +S A + TG ++Q Q P + PS +GS T + P
Sbjct: 875 TLPHLQSMGYHCSNTGQRSLSSPVADQITGQPSSQLQ--PITYGPSH---SGSATTASPA 929
Query: 136 KDHPHPFLSQSNPPTRISSALPLKT-DSALEQTPQQLPSLHLSQ 178
HP S PP+ +P ++ S +P +H Q
Sbjct: 930 ASHPLASSPLSGPPSPQLQPMPYQSPSSGTASSPSPATRMHSGQ 973
>gi|27886559 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 4 [Homo sapiens]
Length = 1045
Score = 29.3 bits (64), Expect = 1.9
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 80 TAPHRSLLAIHLHLVP----ASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPC 135
T PH + H +S A + TG ++Q Q P + PS +GS T + P
Sbjct: 875 TLPHLQSMGYHCSNTGQRSLSSPVADQITGQPSSQLQ--PITYGPSH---SGSATTASPA 929
Query: 136 KDHPHPFLSQSNPPTRISSALPLKT-DSALEQTPQQLPSLHLSQ 178
HP S PP+ +P ++ S +P +H Q
Sbjct: 930 ASHPLASSPLSGPPSPQLQPMPYQSPSSGTASSPSPATRMHSGQ 973
>gi|27886555 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 3 [Homo sapiens]
Length = 1065
Score = 29.3 bits (64), Expect = 1.9
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 80 TAPHRSLLAIHLHLVP----ASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPC 135
T PH + H +S A + TG ++Q Q P + PS +GS T + P
Sbjct: 875 TLPHLQSMGYHCSNTGQRSLSSPVADQITGQPSSQLQ--PITYGPSH---SGSATTASPA 929
Query: 136 KDHPHPFLSQSNPPTRISSALPLKT-DSALEQTPQQLPSLHLSQ 178
HP S PP+ +P ++ S +P +H Q
Sbjct: 930 ASHPLASSPLSGPPSPQLQPMPYQSPSSGTASSPSPATRMHSGQ 973
>gi|4758804 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 2 [Homo sapiens]
Length = 1068
Score = 29.3 bits (64), Expect = 1.9
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 80 TAPHRSLLAIHLHLVP----ASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPC 135
T PH + H +S A + TG ++Q Q P + PS +GS T + P
Sbjct: 875 TLPHLQSMGYHCSNTGQRSLSSPVADQITGQPSSQLQ--PITYGPSH---SGSATTASPA 929
Query: 136 KDHPHPFLSQSNPPTRISSALPLKT-DSALEQTPQQLPSLHLSQ 178
HP S PP+ +P ++ S +P +H Q
Sbjct: 930 ASHPLASSPLSGPPSPQLQPMPYQSPSSGTASSPSPATRMHSGQ 973
>gi|239753480 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1344
Score = 29.3 bits (64), Expect = 1.9
Identities = 30/113 (26%), Positives = 39/113 (34%), Gaps = 19/113 (16%)
Query: 39 LRPRKQATAAGQRKLLSLQLLLCACTSVTDLTYWGPAGHGATAPHRSLLAIHLHLVPASS 98
L PR A + L+ L L C SVT WG A H A S
Sbjct: 133 LTPRSVGHALPEPNLVGTPLRLQQCPSVTLQGVWGSAVHTEEA--------------ILS 178
Query: 99 AAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPCKDHPHPFLSQSNPPTR 151
A + TG H + RG P + + + P H P LS + P +
Sbjct: 179 AEPQFTGHHR-----SARGTPPLSSRDNPAQFMGHPHSVHETPLLSSRDTPAQ 226
>gi|62945417 dystrophia myotonica-containing WD repeat motif protein
[Homo sapiens]
Length = 674
Score = 29.3 bits (64), Expect = 1.9
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 93 LVPASSAAMKATGPHNAQTQVNPRGHAP-----SAEDPTGSWTVSGPCKDHPHPFLSQSN 147
L+P AA ++ GP +AQT V P+ P SA P + S P P P +
Sbjct: 35 LLPGDGAARRS-GPASAQTPVPPQPPQPPPGPASASGPGAAGPASSPPPAGPGP--GPAL 91
Query: 148 PPTRISSALPLKTDSALEQTPQQLPS 173
P R+S + DSA P P+
Sbjct: 92 PAVRLSLVRLGEPDSAGAGEPPATPA 117
>gi|4504649 interleukin 15 receptor, alpha isoform 1 precursor [Homo
sapiens]
Length = 267
Score = 28.9 bits (63), Expect = 2.5
Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Query: 40 RPRKQATAAGQRKLLSLQLLLCACTSVTDLTYWGPAGHGATAPHRSLLAIH----LHLVP 95
R R + +RK + L C T++ +W T P SL I +H P
Sbjct: 54 RERYICNSGFKRKAGTSSLTECVLNKATNVAHW-------TTP--SLKCIRDPALVHQRP 104
Query: 96 ASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPCKDHPHPFLSQSNPPTRISSA 155
A + + G ++P G P+A P+ + T + P L S P+ +
Sbjct: 105 APPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLMPSKSPS--TGT 162
Query: 156 LPLKTDSALEQTPQQ 170
+ + + TP Q
Sbjct: 163 TEISSHESSHGTPSQ 177
>gi|26787982 interleukin 15 receptor, alpha isoform 2 [Homo sapiens]
Length = 231
Score = 28.9 bits (63), Expect = 2.5
Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Query: 40 RPRKQATAAGQRKLLSLQLLLCACTSVTDLTYWGPAGHGATAPHRSLLAIH----LHLVP 95
R R + +RK + L C T++ +W T P SL I +H P
Sbjct: 18 RERYICNSGFKRKAGTSSLTECVLNKATNVAHW-------TTP--SLKCIRDPALVHQRP 68
Query: 96 ASSAAMKATGPHNAQTQVNPRGHAPSAEDPTGSWTVSGPCKDHPHPFLSQSNPPTRISSA 155
A + + G ++P G P+A P+ + T + P L S P+ +
Sbjct: 69 APPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLMPSKSPS--TGT 126
Query: 156 LPLKTDSALEQTPQQ 170
+ + + TP Q
Sbjct: 127 TEISSHESSHGTPSQ 141
>gi|189491742 ataxin 7 isoform b [Homo sapiens]
Length = 945
Score = 28.9 bits (63), Expect = 2.5
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 8/48 (16%)
Query: 115 PRGHAPSAEDPTGSWTVSG--------PCKDHPHPFLSQSNPPTRISS 154
P+ H PS P G G P + PHP L + P +R+SS
Sbjct: 445 PKPHTPSLPRPPGCPAQQGGSAPIDPPPVHESPHPPLPATEPASRLSS 492
>gi|4506797 ataxin 7 isoform a [Homo sapiens]
Length = 892
Score = 28.9 bits (63), Expect = 2.5
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 8/48 (16%)
Query: 115 PRGHAPSAEDPTGSWTVSG--------PCKDHPHPFLSQSNPPTRISS 154
P+ H PS P G G P + PHP L + P +R+SS
Sbjct: 445 PKPHTPSLPRPPGCPAQQGGSAPIDPPPVHESPHPPLPATEPASRLSS 492
>gi|77681565 NG5 protein [Homo sapiens]
Length = 306
Score = 28.9 bits (63), Expect = 2.5
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 13/83 (15%)
Query: 96 ASSAAMKATGPHNAQTQVNPRGHAP----SAEDPTGSWTVSGPCKDHPHPFLSQSN---- 147
ASSAA GP ++ T P HAP + P G T+ + P P+L ++
Sbjct: 65 ASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLP---RMPPDPYLQETRFEGP 121
Query: 148 --PPTRISSALPLKTDSALEQTP 168
PP ++A P + Q P
Sbjct: 122 LPPPPPAAAAPPPPAPAQTAQAP 144
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,020,520
Number of Sequences: 37866
Number of extensions: 402224
Number of successful extensions: 1169
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 1135
Number of HSP's gapped (non-prelim): 110
length of query: 179
length of database: 18,247,518
effective HSP length: 96
effective length of query: 83
effective length of database: 14,612,382
effective search space: 1212827706
effective search space used: 1212827706
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.